Joint Open Genome and Omics Platform (JoGo)

Search by Variant

Regionname

Chr

Snpeff genename

Sampleids

Snpeff haplotype class

Snpeff annotation impact

Snpeff annotation impact detail

Hapid

Samplehapid

No_hapid

No_samplehapid

Start

End

Minac

Maxac

Minlen

Maxlen

Sort By

Order by

regionname	pos	ref	alt	annotation	impact	samples	ahapids	chapids	thapids	thapids	ac	an	af	len	hgvs_c	genename	geneid	featuretype	featureid	transcript_biotype	rank	distance	status	chr	external
PCDHGA3_chr5_141338829_141517975	141438621	TATATATA others(13): Show TATATATATATATATACACAC	T T	intron_variant intron_variant	MODIFIER	NA18984.hp2 NA18984.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0002 a0001c0001t0002	a0001c0001t0002g0218 a0001c0001t0002g0218	1	270	0.0037	-20	c.242 others(41): Show c.2425-56184_2425-56165delTATATATATATATACACACA	PCDHGA3	ENSG00000254245.3	transcript	ENST00000253812.8	protein_coding	1/3		INFO_REALIGN_3_PRIME	chr5	TogoVar
PCDHGA3_chr5_141338829_141517975	141473840	TTAGGAAG others(13): Show TTAGGAAGATGAACCTCGCTA	T T	intron_variant intron_variant	MODIFIER	NA19066.hp1 NA19066.hp1	a0002 a0002	a0002c0002 a0002c0002	a0002c0002t0001 a0002c0002t0001	a0002c0002t0001g0133 a0002c0002t0001g0133	1	270	0.0037	-20	c.242 others(41): Show c.2425-20965_2425-20946delAGGAAGATGAACCTCGCTAT	PCDHGA3	ENSG00000254245.3	transcript	ENST00000253812.8	protein_coding	1/3		INFO_REALIGN_3_PRIME	chr5	TogoVar
PCDHGA3_chr5_141338829_141517975	141498971	GGGAAGGA others(13): Show GGGAAGGAAGGAAGGAAGGAA	G G	intron_variant intron_variant	MODIFIER	HG02723.hp2 HG02809.hp1 HG02897.hp1 others(2): Show HG02723.hp2 HG02809.hp1 HG02897.hp1 HG03490.hp2 HG03492.hp1	a0001 a0011 a0001 a0011	a0001c0001 a0001c0015 a0011c0019 a0001c0001 a0001c0015 a0011c0019	a0001c0001t0001 a0001c0001t0005 a0001c0015t0001 others(1): Show a0001c0001t0001 a0001c0001t0005 a0001c0015t0001 a0011c0019t0001	a0001c0001t0001g0206 a0001c0001t0005g0237 a0001c0001t0005g0238 others(2): Show a0001c0001t0001g0206 a0001c0001t0005g0237 a0001c0001t0005g0238 a0001c0015t0001g0190 a0011c0019t0001g0183	5	270	0.0185	-20	c.248 others(39): Show c.2483+4144_2483+4163delGAAGGAAGGAAGGAAGGAAG	PCDHGA3	ENSG00000254245.3	transcript	ENST00000253812.8	protein_coding	2/3		INFO_REALIGN_3_PRIME	chr5	TogoVar
PCDHGA4_chr5_141350021_141517975	141438621	TATATATA others(13): Show TATATATATATATATACACAC	T T	intron_variant intron_variant	MODIFIER	NA18984.hp2 NA18984.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0002 a0001c0001t0002	a0001c0001t0002g0168 a0001c0001t0002g0168	1	274	0.0037	-20	c.251 others(41): Show c.2515-56184_2515-56165delTATATATATATATACACACA	PCDHGA4	ENSG00000262576.3	transcript	ENST00000571252.3	protein_coding	1/3		INFO_REALIGN_3_PRIME	chr5	TogoVar
PCDHGA4_chr5_141350021_141517975	141473840	TTAGGAAG others(13): Show TTAGGAAGATGAACCTCGCTA	T T	intron_variant intron_variant	MODIFIER	NA19066.hp2 NA19066.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0122 a0001c0001t0001g0122	1	274	0.0037	-20	c.251 others(41): Show c.2515-20965_2515-20946delAGGAAGATGAACCTCGCTAT	PCDHGA4	ENSG00000262576.3	transcript	ENST00000571252.3	protein_coding	1/3		INFO_REALIGN_3_PRIME	chr5	TogoVar
PCDHGA4_chr5_141350021_141517975	141498971	GGGAAGGA others(13): Show GGGAAGGAAGGAAGGAAGGAA	G G	intron_variant intron_variant	MODIFIER	HG02723.hp2 HG02897.hp1 HG03490.hp1 others(1): Show HG02723.hp2 HG02897.hp1 HG03490.hp1 HG03492.hp1	a0002 a0003 a0004 a0002 a0003 a0004	a0002c0002 a0003c0003 a0004c0013 a0002c0002 a0003c0003 a0004c0013	a0002c0002t0001 a0003c0003t0005 a0004c0013t0001 a0002c0002t0001 a0003c0003t0005 a0004c0013t0001	a0002c0002t0001g0226 a0003c0003t0005g0090 a0003c0003t0005g0091 others(1): Show a0002c0002t0001g0226 a0003c0003t0005g0090 a0003c0003t0005g0091 a0004c0013t0001g0013	4	274	0.0146	-20	c.257 others(39): Show c.2573+4144_2573+4163delGAAGGAAGGAAGGAAGGAAG	PCDHGA4	ENSG00000262576.3	transcript	ENST00000571252.3	protein_coding	2/3		INFO_REALIGN_3_PRIME	chr5	TogoVar
PCDHGA5_chr5_141359162_141517975	141438621	TATATATA others(13): Show TATATATATATATATACACAC	T T	intron_variant intron_variant	MODIFIER	NA18984.hp2 NA18984.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0002 a0001c0001t0002	a0001c0001t0002g0045 a0001c0001t0002g0045	1	292	0.0034	-20	c.242 others(41): Show c.2422-56184_2422-56165delTATATATATATATACACACA	PCDHGA5	ENSG00000253485.3	transcript	ENST00000518069.2	protein_coding	1/3		INFO_REALIGN_3_PRIME	chr5	TogoVar
PCDHGA5_chr5_141359162_141517975	141473840	TTAGGAAG others(13): Show TTAGGAAGATGAACCTCGCTA	T T	intron_variant intron_variant	MODIFIER	NA19066.hp2 NA19066.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0153 a0001c0001t0001g0153	1	292	0.0034	-20	c.242 others(41): Show c.2422-20965_2422-20946delAGGAAGATGAACCTCGCTAT	PCDHGA5	ENSG00000253485.3	transcript	ENST00000518069.2	protein_coding	1/3		INFO_REALIGN_3_PRIME	chr5	TogoVar
PCDHGA5_chr5_141359162_141517975	141498971	GGGAAGGA others(13): Show GGGAAGGAAGGAAGGAAGGAA	G G	intron_variant intron_variant	MODIFIER	HG02723.hp2 HG02809.hp2 HG02897.hp1 others(2): Show HG02723.hp2 HG02809.hp2 HG02897.hp1 HG03490.hp2 HG03492.hp2	a0001 a0002 a0001 a0002	a0001c0001 a0001c0003 a0002c0018 a0001c0001 a0001c0003 a0002c0018	a0001c0001t0001 a0001c0001t0005 a0001c0003t0001 others(1): Show a0001c0001t0001 a0001c0001t0005 a0001c0003t0001 a0002c0018t0001	a0001c0001t0001g0091 a0001c0001t0005g0078 a0001c0001t0005g0079 others(2): Show a0001c0001t0001g0091 a0001c0001t0005g0078 a0001c0001t0005g0079 a0001c0003t0001g0005 a0002c0018t0001g0236	5	292	0.0171	-20	c.248 others(39): Show c.2480+4144_2480+4163delGAAGGAAGGAAGGAAGGAAG	PCDHGA5	ENSG00000253485.3	transcript	ENST00000518069.2	protein_coding	2/3		INFO_REALIGN_3_PRIME	chr5	TogoVar
PCDHGA6_chr5_141368891_141517975	141438621	TATATATA others(13): Show TATATATATATATATACACAC	T T	intron_variant intron_variant	MODIFIER	NA18984.hp1 NA18984.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0002 a0001c0001t0002	a0001c0001t0002g0021 a0001c0001t0002g0021	1	292	0.0034	-20	c.242 others(41): Show c.2425-56184_2425-56165delTATATATATATATACACACA	PCDHGA6	ENSG00000253731.3	transcript	ENST00000517434.3	protein_coding	1/3		INFO_REALIGN_3_PRIME	chr5	TogoVar
PCDHGA6_chr5_141368891_141517975	141473840	TTAGGAAG others(13): Show TTAGGAAGATGAACCTCGCTA	T T	intron_variant intron_variant	MODIFIER	NA19066.hp1 NA19066.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0140 a0001c0001t0001g0140	1	292	0.0034	-20	c.242 others(41): Show c.2425-20965_2425-20946delAGGAAGATGAACCTCGCTAT	PCDHGA6	ENSG00000253731.3	transcript	ENST00000517434.3	protein_coding	1/3		INFO_REALIGN_3_PRIME	chr5	TogoVar
PCDHGA6_chr5_141368891_141517975	141498971	GGGAAGGA others(13): Show GGGAAGGAAGGAAGGAAGGAA	G G	intron_variant intron_variant	MODIFIER	HG02723.hp2 HG02809.hp1 HG02897.hp2 others(2): Show HG02723.hp2 HG02809.hp1 HG02897.hp2 HG03490.hp1 HG03492.hp2	a0001 a0003 a0001 a0003	a0001c0001 a0001c0004 a0001c0019 others(1): Show a0001c0001 a0001c0004 a0001c0019 a0003c0011	a0001c0001t0005 a0001c0004t0001 a0001c0019t0001 others(1): Show a0001c0001t0005 a0001c0004t0001 a0001c0019t0001 a0003c0011t0001	a0001c0001t0005g0057 a0001c0001t0005g0058 a0001c0004t0001g0187 others(2): Show a0001c0001t0005g0057 a0001c0001t0005g0058 a0001c0004t0001g0187 a0001c0019t0001g0181 a0003c0011t0001g0254	5	292	0.0171	-20	c.248 others(39): Show c.2483+4144_2483+4163delGAAGGAAGGAAGGAAGGAAG	PCDHGA6	ENSG00000253731.3	transcript	ENST00000517434.3	protein_coding	2/3		INFO_REALIGN_3_PRIME	chr5	TogoVar
PCDHGA7_chr5_141377742_141517975	141438621	TATATATA others(13): Show TATATATATATATATACACAC	T T	intron_variant intron_variant	MODIFIER	NA18984.hp2 NA18984.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0002 a0001c0001t0002	a0001c0001t0002g0207 a0001c0001t0002g0207	1	292	0.0034	-20	c.242 others(41): Show c.2424+53300_2424+53319delTATATATATATATACACACA	PCDHGA7	ENSG00000253537.3	transcript	ENST00000518325.2	protein_coding	1/3		INFO_REALIGN_3_PRIME	chr5	TogoVar
PCDHGA7_chr5_141377742_141517975	141473840	TTAGGAAG others(13): Show TTAGGAAGATGAACCTCGCTA	T T	intron_variant intron_variant	MODIFIER	NA19066.hp2 NA19066.hp2	a0002 a0002	a0002c0002 a0002c0002	a0002c0002t0001 a0002c0002t0001	a0002c0002t0001g0113 a0002c0002t0001g0113	1	292	0.0034	-20	c.242 others(41): Show c.2425-20965_2425-20946delAGGAAGATGAACCTCGCTAT	PCDHGA7	ENSG00000253537.3	transcript	ENST00000518325.2	protein_coding	1/3		INFO_REALIGN_3_PRIME	chr5	TogoVar
PCDHGA7_chr5_141377742_141517975	141498971	GGGAAGGA others(13): Show GGGAAGGAAGGAAGGAAGGAA	G G	intron_variant intron_variant	MODIFIER	HG02723.hp2 HG02809.hp1 HG02897.hp2 others(2): Show HG02723.hp2 HG02809.hp1 HG02897.hp2 HG03490.hp2 HG03492.hp1	a0001 a0010 a0001 a0010	a0001c0001 a0001c0021 a0010c0014 a0001c0001 a0001c0021 a0010c0014	a0001c0001t0001 a0001c0001t0005 a0001c0021t0001 others(1): Show a0001c0001t0001 a0001c0001t0005 a0001c0021t0001 a0010c0014t0001	a0001c0001t0001g0253 a0001c0001t0005g0050 a0001c0001t0005g0051 others(2): Show a0001c0001t0001g0253 a0001c0001t0005g0050 a0001c0001t0005g0051 a0001c0021t0001g0233 a0010c0014t0001g0270	5	292	0.0171	-20	c.248 others(39): Show c.2483+4144_2483+4163delGAAGGAAGGAAGGAAGGAAG	PCDHGA7	ENSG00000253537.3	transcript	ENST00000518325.2	protein_coding	2/3		INFO_REALIGN_3_PRIME	chr5	TogoVar
PCDHGA8_chr5_141387633_141517975	141438621	TATATATA others(13): Show TATATATATATATATACACAC	T T	intron_variant intron_variant	MODIFIER	NA18984.hp2 NA18984.hp2	a0002 a0002	a0002c0002 a0002c0002	a0002c0002t0002 a0002c0002t0002	a0002c0002t0002g0222 a0002c0002t0002g0222	1	302	0.0033	-20	c.242 others(41): Show c.2424+43386_2424+43405delTATATATATATATACACACA	PCDHGA8	ENSG00000253767.3	transcript	ENST00000398604.3	protein_coding	1/3		INFO_REALIGN_3_PRIME	chr5	TogoVar
PCDHGA8_chr5_141387633_141517975	141473840	TTAGGAAG others(13): Show TTAGGAAGATGAACCTCGCTA	T T	intron_variant intron_variant	MODIFIER	NA19066.hp2 NA19066.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0127 a0001c0001t0001g0127	1	302	0.0033	-20	c.242 others(41): Show c.2425-20965_2425-20946delAGGAAGATGAACCTCGCTAT	PCDHGA8	ENSG00000253767.3	transcript	ENST00000398604.3	protein_coding	1/3		INFO_REALIGN_3_PRIME	chr5	TogoVar
PCDHGA8_chr5_141387633_141517975	141498971	GGGAAGGA others(13): Show GGGAAGGAAGGAAGGAAGGAA	G G	intron_variant intron_variant	MODIFIER	HG02723.hp1 HG02809.hp2 HG02897.hp2 others(2): Show HG02723.hp1 HG02809.hp2 HG02897.hp2 HG03490.hp1 HG03492.hp2	a0001 a0001	a0001c0004 a0001c0024 a0001c0004 a0001c0024	a0001c0004t0001 a0001c0004t0005 a0001c0024t0001 a0001c0004t0001 a0001c0004t0005 a0001c0024t0001	a0001c0004t0001g0140 a0001c0004t0001g0253 a0001c0004t0005g0284 others(2): Show a0001c0004t0001g0140 a0001c0004t0001g0253 a0001c0004t0005g0284 a0001c0004t0005g0285 a0001c0024t0001g0231	5	302	0.0166	-20	c.248 others(39): Show c.2483+4144_2483+4163delGAAGGAAGGAAGGAAGGAAG	PCDHGA8	ENSG00000253767.3	transcript	ENST00000398604.3	protein_coding	2/3		INFO_REALIGN_3_PRIME	chr5	TogoVar
PCDHGA9_chr5_141397778_141517975	141438621	TATATATA others(13): Show TATATATATATATATACACAC	T T	intron_variant intron_variant	MODIFIER	NA18984.hp2 NA18984.hp2	a0001 a0001	a0001c0002 a0001c0002	a0001c0002t0002 a0001c0002t0002	a0001c0002t0002g0054 a0001c0002t0002g0054	1	302	0.0033	-20	c.242 others(41): Show c.2424+33247_2424+33266delTATATATATATATACACACA	PCDHGA9	ENSG00000261934.3	transcript	ENST00000573521.2	protein_coding	1/3		INFO_REALIGN_3_PRIME	chr5	TogoVar
PCDHGA9_chr5_141397778_141517975	141473840	TTAGGAAG others(13): Show TTAGGAAGATGAACCTCGCTA	T T	intron_variant intron_variant	MODIFIER	NA19066.hp2 NA19066.hp2	a0010 a0010	a0010c0016 a0010c0016	a0010c0016t0001 a0010c0016t0001	a0010c0016t0001g0116 a0010c0016t0001g0116	1	302	0.0033	-20	c.242 others(41): Show c.2425-20965_2425-20946delAGGAAGATGAACCTCGCTAT	PCDHGA9	ENSG00000261934.3	transcript	ENST00000573521.2	protein_coding	1/3		INFO_REALIGN_3_PRIME	chr5	TogoVar
PCDHGA9_chr5_141397778_141517975	141498971	GGGAAGGA others(13): Show GGGAAGGAAGGAAGGAAGGAA	G G	intron_variant intron_variant	MODIFIER	HG02723.hp2 HG02809.hp2 HG02897.hp2 others(2): Show HG02723.hp2 HG02809.hp2 HG02897.hp2 HG03490.hp2 HG03492.hp1	a0001 a0001	a0001c0003 a0001c0021 a0001c0003 a0001c0021	a0001c0003t0001 a0001c0003t0005 a0001c0021t0001 a0001c0003t0001 a0001c0003t0005 a0001c0021t0001	a0001c0003t0001g0249 a0001c0003t0001g0269 a0001c0003t0005g0202 others(2): Show a0001c0003t0001g0249 a0001c0003t0001g0269 a0001c0003t0005g0202 a0001c0003t0005g0203 a0001c0021t0001g0168	5	302	0.0166	-20	c.248 others(39): Show c.2483+4144_2483+4163delGAAGGAAGGAAGGAAGGAAG	PCDHGA9	ENSG00000261934.3	transcript	ENST00000573521.2	protein_coding	2/3		INFO_REALIGN_3_PRIME	chr5	TogoVar
PCDHGB1_chr5_141345099_141517975	141347137	CTCTTTCT others(13): Show CTCTTTCTTTCTTTCTTTCTT	C C	upstream_gene_variant upstream_gene_variant	MODIFIER	HG00733.hp1 HG00738.hp2 HG01099.hp1 others(18): Show HG00733.hp1 HG00738.hp2 HG01099.hp1 HG01168.hp2 HG01192.hp2 HG01516.hp2 HG01517.hp1 HG02258.hp2 HG02559.hp1 HG02622.hp1 HG02698.hp2 HG02886.hp2 HG03098.hp1 HG03130.hp1 HG03209.hp2 HG03225.hp2 HG03453.hp2 HG03834.hp2 NA19043.hp1 NA20129.hp1 homoSapiens_chm13v2.hp1	a0002 a0005 a0002 a0005	a0002c0004 a0002c0021 a0005c0011 a0002c0004 a0002c0021 a0005c0011	a0002c0004t0001 a0002c0021t0001 a0005c0011t0001 a0002c0004t0001 a0002c0021t0001 a0005c0011t0001	a0002c0004t0001g0012 a0002c0004t0001g0013 a0002c0004t0001g0014 others(18): Show a0002c0004t0001g0012 a0002c0004t0001g0013 a0002c0004t0001g0014 a0002c0004t0001g0015 a0002c0004t0001g0016 a0002c0004t0001g0017 a0002c0004t0001g0018 a0002c0004t0001g0019 a0002c0004t0001g0020 a0002c0004t0001g0021 a0002c0004t0001g0022 a0002c0004t0001g0024 a0002c0004t0001g0025 a0002c0004t0001g0026 a0002c0004t0001g0027 a0002c0004t0001g0028 a0002c0004t0001g0029 a0002c0004t0001g0031 a0002c0021t0001g0030 a0005c0011t0001g0268 a0005c0011t0001g0269	21	278	0.0755	-20	c.-31 others(31): Show c.-3123_-3104delTCTTTCTTTCTTTCTTTCTT	PCDHGB1	ENSG00000254221.3	transcript	ENST00000523390.2	protein_coding		2961		chr5	TogoVar
PCDHGB1_chr5_141345099_141517975	141438621	TATATATA others(13): Show TATATATATATATATACACAC	T T	intron_variant intron_variant	MODIFIER	NA18984.hp2 NA18984.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0003 a0001c0001t0003	a0001c0001t0003g0210 a0001c0001t0003g0210	1	278	0.0036	-20	c.241 others(41): Show c.2410-56184_2410-56165delTATATATATATATACACACA	PCDHGB1	ENSG00000254221.3	transcript	ENST00000523390.2	protein_coding	1/3		INFO_REALIGN_3_PRIME	chr5	TogoVar
PCDHGB1_chr5_141345099_141517975	141473840	TTAGGAAG others(13): Show TTAGGAAGATGAACCTCGCTA	T T	intron_variant intron_variant	MODIFIER	NA19066.hp1 NA19066.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0063 a0001c0001t0001g0063	1	278	0.0036	-20	c.241 others(41): Show c.2410-20965_2410-20946delAGGAAGATGAACCTCGCTAT	PCDHGB1	ENSG00000254221.3	transcript	ENST00000523390.2	protein_coding	1/3		INFO_REALIGN_3_PRIME	chr5	TogoVar
PCDHGB1_chr5_141345099_141517975	141498971	GGGAAGGA others(13): Show GGGAAGGAAGGAAGGAAGGAA	G G	intron_variant intron_variant	MODIFIER	HG02723.hp1 HG02897.hp1 HG03490.hp1 others(1): Show HG02723.hp1 HG02897.hp1 HG03490.hp1 HG03492.hp1	a0001 a0001	a0001c0002 a0001c0009 a0001c0015 a0001c0002 a0001c0009 a0001c0015	a0001c0002t0001 a0001c0009t0005 a0001c0015t0001 a0001c0002t0001 a0001c0009t0005 a0001c0015t0001	a0001c0002t0001g0267 a0001c0009t0005g0084 a0001c0009t0005g0085 others(1): Show a0001c0002t0001g0267 a0001c0009t0005g0084 a0001c0009t0005g0085 a0001c0015t0001g0093	4	278	0.0144	-20	c.246 others(39): Show c.2468+4144_2468+4163delGAAGGAAGGAAGGAAGGAAG	PCDHGB1	ENSG00000254221.3	transcript	ENST00000523390.2	protein_coding	2/3		INFO_REALIGN_3_PRIME	chr5	TogoVar
PCDHGB2_chr5_141354994_141517975	141438621	TATATATA others(13): Show TATATATATATATATACACAC	T T	intron_variant intron_variant	MODIFIER	NA18984.hp2 NA18984.hp2	a0001 a0001	a0001c0019 a0001c0019	a0001c0019t0002 a0001c0019t0002	a0001c0019t0002g0044 a0001c0019t0002g0044	1	288	0.0035	-20	c.242 others(41): Show c.2422-56184_2422-56165delTATATATATATATACACACA	PCDHGB2	ENSG00000253910.3	transcript	ENST00000522605.2	protein_coding	1/3		INFO_REALIGN_3_PRIME	chr5	TogoVar
PCDHGB2_chr5_141354994_141517975	141473840	TTAGGAAG others(13): Show TTAGGAAGATGAACCTCGCTA	T T	intron_variant intron_variant	MODIFIER	NA19066.hp2 NA19066.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0112 a0001c0001t0001g0112	1	288	0.0035	-20	c.242 others(41): Show c.2422-20965_2422-20946delAGGAAGATGAACCTCGCTAT	PCDHGB2	ENSG00000253910.3	transcript	ENST00000522605.2	protein_coding	1/3		INFO_REALIGN_3_PRIME	chr5	TogoVar
PCDHGB2_chr5_141354994_141517975	141498971	GGGAAGGA others(13): Show GGGAAGGAAGGAAGGAAGGAA	G G	intron_variant intron_variant	MODIFIER	HG02723.hp2 HG02809.hp2 HG02897.hp2 others(2): Show HG02723.hp2 HG02809.hp2 HG02897.hp2 HG03490.hp2 HG03492.hp1	a0001 a0003 a0001 a0003	a0001c0001 a0001c0018 a0003c0003 a0001c0001 a0001c0018 a0003c0003	a0001c0001t0001 a0001c0001t0005 a0001c0018t0001 others(1): Show a0001c0001t0001 a0001c0001t0005 a0001c0018t0001 a0003c0003t0001	a0001c0001t0001g0082 a0001c0001t0005g0072 a0001c0001t0005g0073 others(2): Show a0001c0001t0001g0082 a0001c0001t0005g0072 a0001c0001t0005g0073 a0001c0018t0001g0225 a0003c0003t0001g0288	5	288	0.0174	-20	c.248 others(39): Show c.2480+4144_2480+4163delGAAGGAAGGAAGGAAGGAAG	PCDHGB2	ENSG00000253910.3	transcript	ENST00000522605.2	protein_coding	2/3		INFO_REALIGN_3_PRIME	chr5	TogoVar
PCDHGB3_chr5_141365242_141517975	141438621	TATATATA others(13): Show TATATATATATATATACACAC	T T	intron_variant intron_variant	MODIFIER	NA18984.hp2 NA18984.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0002 a0001c0001t0002	a0001c0001t0002g0012 a0001c0001t0002g0012	1	296	0.0034	-20	c.241 others(41): Show c.2416-56184_2416-56165delTATATATATATATACACACA	PCDHGB3	ENSG00000262209.3	transcript	ENST00000576222.2	protein_coding	1/3		INFO_REALIGN_3_PRIME	chr5	TogoVar
PCDHGB3_chr5_141365242_141517975	141473840	TTAGGAAG others(13): Show TTAGGAAGATGAACCTCGCTA	T T	intron_variant intron_variant	MODIFIER	NA19066.hp2 NA19066.hp2	a0002 a0002	a0002c0002 a0002c0002	a0002c0002t0001 a0002c0002t0001	a0002c0002t0001g0122 a0002c0002t0001g0122	1	296	0.0034	-20	c.241 others(41): Show c.2416-20965_2416-20946delAGGAAGATGAACCTCGCTAT	PCDHGB3	ENSG00000262209.3	transcript	ENST00000576222.2	protein_coding	1/3		INFO_REALIGN_3_PRIME	chr5	TogoVar
PCDHGB3_chr5_141365242_141517975	141498971	GGGAAGGA others(13): Show GGGAAGGAAGGAAGGAAGGAA	G G	intron_variant intron_variant	MODIFIER	HG02723.hp2 HG02809.hp2 HG02897.hp1 others(2): Show HG02723.hp2 HG02809.hp2 HG02897.hp1 HG03490.hp1 HG03492.hp2	a0001 a0008 a0001 a0008	a0001c0001 a0001c0020 a0008c0024 a0001c0001 a0001c0020 a0008c0024	a0001c0001t0001 a0001c0001t0005 a0001c0020t0001 others(1): Show a0001c0001t0001 a0001c0001t0005 a0001c0020t0001 a0008c0024t0001	a0001c0001t0001g0224 a0001c0001t0005g0061 a0001c0001t0005g0062 others(2): Show a0001c0001t0001g0224 a0001c0001t0005g0061 a0001c0001t0005g0062 a0001c0020t0001g0159 a0008c0024t0001g0294	5	296	0.0169	-20	c.247 others(39): Show c.2474+4144_2474+4163delGAAGGAAGGAAGGAAGGAAG	PCDHGB3	ENSG00000262209.3	transcript	ENST00000576222.2	protein_coding	2/3		INFO_REALIGN_3_PRIME	chr5	TogoVar
PCDHGB4_chr5_141382698_141517975	141438621	TATATATA others(13): Show TATATATATATATATACACAC	T T	intron_variant intron_variant	MODIFIER	NA18984.hp1 NA18984.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0002 a0001c0001t0002	a0001c0001t0002g0074 a0001c0001t0002g0074	1	294	0.0034	-20	c.239 others(41): Show c.2397+48342_2397+48361delTATATATATATATACACACA	PCDHGB4	ENSG00000253953.3	transcript	ENST00000519479.2	protein_coding	1/3		INFO_REALIGN_3_PRIME	chr5	TogoVar
PCDHGB4_chr5_141382698_141517975	141473840	TTAGGAAG others(13): Show TTAGGAAGATGAACCTCGCTA	T T	intron_variant intron_variant	MODIFIER	NA19066.hp1 NA19066.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0196 a0001c0001t0001g0196	1	294	0.0034	-20	c.239 others(41): Show c.2398-20965_2398-20946delAGGAAGATGAACCTCGCTAT	PCDHGB4	ENSG00000253953.3	transcript	ENST00000519479.2	protein_coding	1/3		INFO_REALIGN_3_PRIME	chr5	TogoVar
PCDHGB4_chr5_141382698_141517975	141498971	GGGAAGGA others(13): Show GGGAAGGAAGGAAGGAAGGAA	G G	intron_variant intron_variant	MODIFIER	HG02723.hp1 HG02809.hp2 HG02897.hp1 others(2): Show HG02723.hp1 HG02809.hp2 HG02897.hp1 HG03490.hp1 HG03492.hp1	a0001 a0005 a0001 a0005	a0001c0001 a0001c0002 a0001c0016 others(1): Show a0001c0001 a0001c0002 a0001c0016 a0005c0009	a0001c0001t0001 a0001c0002t0001 a0001c0016t0001 others(1): Show a0001c0001t0001 a0001c0002t0001 a0001c0016t0001 a0005c0009t0005	a0001c0001t0001g0029 a0001c0002t0001g0234 a0001c0016t0001g0258 others(2): Show a0001c0001t0001g0029 a0001c0002t0001g0234 a0001c0016t0001g0258 a0005c0009t0005g0241 a0005c0009t0005g0242	5	294	0.0170	-20	c.245 others(39): Show c.2456+4144_2456+4163delGAAGGAAGGAAGGAAGGAAG	PCDHGB4	ENSG00000253953.3	transcript	ENST00000519479.2	protein_coding	2/3		INFO_REALIGN_3_PRIME	chr5	TogoVar
PCDHGB5_chr5_141392947_141517975	141438621	TATATATA others(13): Show TATATATATATATATACACAC	T T	intron_variant intron_variant	MODIFIER	NA18984.hp2 NA18984.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0003 a0001c0001t0003	a0001c0001t0003g0244 a0001c0001t0003g0244	1	300	0.0033	-20	c.239 others(41): Show c.2397+38099_2397+38118delTATATATATATATACACACA	PCDHGB5	ENSG00000276547.2	transcript	ENST00000617380.2	protein_coding	1/3		INFO_REALIGN_3_PRIME	chr5	TogoVar
PCDHGB5_chr5_141392947_141517975	141473840	TTAGGAAG others(13): Show TTAGGAAGATGAACCTCGCTA	T T	intron_variant intron_variant	MODIFIER	NA19066.hp2 NA19066.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0213 a0001c0001t0001g0213	1	300	0.0033	-20	c.239 others(41): Show c.2398-20965_2398-20946delAGGAAGATGAACCTCGCTAT	PCDHGB5	ENSG00000276547.2	transcript	ENST00000617380.2	protein_coding	1/3		INFO_REALIGN_3_PRIME	chr5	TogoVar
PCDHGB5_chr5_141392947_141517975	141498971	GGGAAGGA others(13): Show GGGAAGGAAGGAAGGAAGGAA	G G	intron_variant intron_variant	MODIFIER	HG02723.hp1 HG02809.hp2 HG02897.hp1 others(2): Show HG02723.hp1 HG02809.hp2 HG02897.hp1 HG03490.hp1 HG03492.hp1	a0001 a0003 a0006 others(1): Show a0001 a0003 a0006 a0013	a0001c0008 a0003c0003 a0006c0006 others(1): Show a0001c0008 a0003c0003 a0006c0006 a0013c0021	a0001c0008t0001 a0003c0003t0007 a0006c0006t0002 others(1): Show a0001c0008t0001 a0003c0003t0007 a0006c0006t0002 a0013c0021t0002	a0001c0008t0001g0273 a0003c0003t0007g0082 a0003c0003t0007g0083 others(2): Show a0001c0008t0001g0273 a0003c0003t0007g0082 a0003c0003t0007g0083 a0006c0006t0002g0087 a0013c0021t0002g0080	5	300	0.0167	-20	c.245 others(39): Show c.2456+4144_2456+4163delGAAGGAAGGAAGGAAGGAAG	PCDHGB5	ENSG00000276547.2	transcript	ENST00000617380.2	protein_coding	2/3		INFO_REALIGN_3_PRIME	chr5	TogoVar
PCDHGB6_chr5_141403021_141517975	141438621	TATATATA others(13): Show TATATATATATATATACACAC	T T	intron_variant intron_variant	MODIFIER	NA18984.hp1 NA18984.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0002 a0001c0001t0002	a0001c0001t0002g0125 a0001c0001t0002g0125	1	302	0.0033	-20	c.241 others(41): Show c.2418+28003_2418+28022delTATATATATATATACACACA	PCDHGB6	ENSG00000253305.3	transcript	ENST00000520790.2	protein_coding	1/3		INFO_REALIGN_3_PRIME	chr5	TogoVar
PCDHGB6_chr5_141403021_141517975	141473840	TTAGGAAG others(13): Show TTAGGAAGATGAACCTCGCTA	T T	intron_variant intron_variant	MODIFIER	NA19066.hp2 NA19066.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0034 a0001c0001t0001g0034	1	302	0.0033	-20	c.241 others(41): Show c.2419-20965_2419-20946delAGGAAGATGAACCTCGCTAT	PCDHGB6	ENSG00000253305.3	transcript	ENST00000520790.2	protein_coding	1/3		INFO_REALIGN_3_PRIME	chr5	TogoVar
PCDHGB6_chr5_141403021_141517975	141498971	GGGAAGGA others(13): Show GGGAAGGAAGGAAGGAAGGAA	G G	intron_variant intron_variant	MODIFIER	HG02723.hp1 HG02809.hp2 HG02897.hp2 others(2): Show HG02723.hp1 HG02809.hp2 HG02897.hp2 HG03490.hp1 HG03492.hp1	a0001 a0002 a0003 a0001 a0002 a0003	a0001c0018 a0002c0002 a0003c0004 a0001c0018 a0002c0002 a0003c0004	a0001c0018t0001 a0002c0002t0001 a0003c0004t0001 others(1): Show a0001c0018t0001 a0002c0002t0001 a0003c0004t0001 a0003c0004t0005	a0001c0018t0001g0268 a0002c0002t0001g0002 a0003c0004t0001g0192 others(2): Show a0001c0018t0001g0268 a0002c0002t0001g0002 a0003c0004t0001g0192 a0003c0004t0005g0187 a0003c0004t0005g0188	5	302	0.0166	-20	c.247 others(39): Show c.2477+4144_2477+4163delGAAGGAAGGAAGGAAGGAAG	PCDHGB6	ENSG00000253305.3	transcript	ENST00000520790.2	protein_coding	2/3		INFO_REALIGN_3_PRIME	chr5	TogoVar
PCDHGB7_chr5_141412677_141517975	141438621	TATATATA others(13): Show TATATATATATATATACACAC	T T	intron_variant intron_variant	MODIFIER	NA18984.hp2 NA18984.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0004 a0001c0001t0004	a0001c0001t0004g0257 a0001c0001t0004g0257	1	306	0.0033	-20	c.241 others(41): Show c.2415+18349_2415+18368delTATATATATATATACACACA	PCDHGB7	ENSG00000254122.3	transcript	ENST00000398594.4	protein_coding	1/3		INFO_REALIGN_3_PRIME	chr5	TogoVar
PCDHGB7_chr5_141412677_141517975	141473840	TTAGGAAG others(13): Show TTAGGAAGATGAACCTCGCTA	T T	intron_variant intron_variant	MODIFIER	NA19066.hp1 NA19066.hp1	a0001 a0001	a0001c0002 a0001c0002	a0001c0002t0001 a0001c0002t0001	a0001c0002t0001g0213 a0001c0002t0001g0213	1	306	0.0033	-20	c.241 others(41): Show c.2416-20965_2416-20946delAGGAAGATGAACCTCGCTAT	PCDHGB7	ENSG00000254122.3	transcript	ENST00000398594.4	protein_coding	1/3		INFO_REALIGN_3_PRIME	chr5	TogoVar
PCDHGB7_chr5_141412677_141517975	141498971	GGGAAGGA others(13): Show GGGAAGGAAGGAAGGAAGGAA	G G	intron_variant intron_variant	MODIFIER	HG02723.hp1 HG02809.hp2 HG02897.hp2 others(2): Show HG02723.hp1 HG02809.hp2 HG02897.hp2 HG03490.hp1 HG03492.hp1	a0001 a0005 a0009 a0001 a0005 a0009	a0001c0001 a0001c0006 a0005c0007 others(1): Show a0001c0001 a0001c0006 a0005c0007 a0009c0016	a0001c0001t0002 a0001c0006t0001 a0005c0007t0008 others(1): Show a0001c0001t0002 a0001c0006t0001 a0005c0007t0008 a0009c0016t0002	a0001c0001t0002g0011 a0001c0006t0001g0104 a0005c0007t0008g0018 others(2): Show a0001c0001t0002g0011 a0001c0006t0001g0104 a0005c0007t0008g0018 a0005c0007t0008g0019 a0009c0016t0002g0021	5	306	0.0163	-20	c.247 others(39): Show c.2474+4144_2474+4163delGAAGGAAGGAAGGAAGGAAG	PCDHGB7	ENSG00000254122.3	transcript	ENST00000398594.4	protein_coding	2/3		INFO_REALIGN_3_PRIME	chr5	TogoVar
PCDHGC3_chr5_141470966_141517975	141473840	TTAGGAAG others(13): Show TTAGGAAGATGAACCTCGCTA	T T	upstream_gene_variant upstream_gene_variant	MODIFIER	NA19066.hp1 NA19066.hp1	a0001 a0001	a0001c0002 a0001c0002	a0001c0002t0001 a0001c0002t0001	a0001c0002t0001g0127 a0001c0002t0001g0127	1	350	0.0029	-20	c.-22 others(31): Show c.-2276_-2257delTAGGAAGATGAACCTCGCTA	PCDHGC3	ENSG00000240184.7	transcript	ENST00000308177.5	protein_coding		2125		chr5	TogoVar
PCDHGC3_chr5_141470966_141517975	141498300	GGTCACAC others(13): Show GGTCACACTGCCTACACAGAA	G G	intron_variant intron_variant	MODIFIER	NA18988.hp2 NA18988.hp2	a0001 a0001	a0001c0003 a0001c0003	a0001c0003t0004 a0001c0003t0004	a0001c0003t0004g0048 a0001c0003t0004g0048	1	350	0.0029	-20	c.248 others(39): Show c.2489+3437_2489+3456delTCACACTGCCTACACAGAAG	PCDHGC3	ENSG00000240184.7	transcript	ENST00000308177.5	protein_coding	2/3		INFO_REALIGN_3_PRIME	chr5	TogoVar
PCDHGC3_chr5_141470966_141517975	141498971	GGGAAGGA others(13): Show GGGAAGGAAGGAAGGAAGGAA	G G	intron_variant intron_variant	MODIFIER	HG02723.hp1 HG02809.hp2 HG02896.hp1 others(5): Show HG02723.hp1 HG02809.hp2 HG02896.hp1 HG02897.hp2 HG03041.hp2 HG03490.hp2 HG03492.hp2 NA18949.hp2	a0001 a0001	a0001c0001 a0001c0003 a0001c0004 others(1): Show a0001c0001 a0001c0003 a0001c0004 a0001c0009	a0001c0001t0001 a0001c0001t0005 a0001c0003t0004 others(2): Show a0001c0001t0001 a0001c0001t0005 a0001c0003t0004 a0001c0004t0001 a0001c0009t0001	a0001c0001t0001g0259 a0001c0001t0005g0015 a0001c0003t0004g0029 others(4): Show a0001c0001t0001g0259 a0001c0001t0005g0015 a0001c0003t0004g0029 a0001c0004t0001g0101 a0001c0004t0001g0103 a0001c0009t0001g0254 a0001c0009t0001g0255	8	350	0.0229	-20	c.248 others(39): Show c.2489+4144_2489+4163delGAAGGAAGGAAGGAAGGAAG	PCDHGC3	ENSG00000240184.7	transcript	ENST00000308177.5	protein_coding	2/3		INFO_REALIGN_3_PRIME	chr5	TogoVar
PCDHGC4_chr5_141480030_141517975	141498300	GGTCACAC others(13): Show GGTCACACTGCCTACACAGAA	G G	intron_variant intron_variant	MODIFIER	NA18988.hp1 NA18988.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0004 a0001c0001t0004	a0001c0001t0004g0165 a0001c0001t0004g0165	1	354	0.0028	-20	c.250 others(39): Show c.2501+3437_2501+3456delTCACACTGCCTACACAGAAG	PCDHGC4	ENSG00000242419.6	transcript	ENST00000306593.2	protein_coding	2/3		INFO_REALIGN_3_PRIME	chr5	TogoVar
PCDHGC4_chr5_141480030_141517975	141498971	GGGAAGGA others(13): Show GGGAAGGAAGGAAGGAAGGAA	G G	intron_variant intron_variant	MODIFIER	HG02723.hp1 HG02809.hp2 HG02896.hp1 others(5): Show HG02723.hp1 HG02809.hp2 HG02896.hp1 HG02897.hp2 HG03041.hp2 HG03490.hp1 HG03492.hp1 NA18949.hp2	a0001 a0002 a0001 a0002	a0001c0001 a0001c0003 a0002c0002 a0001c0001 a0001c0003 a0002c0002	a0001c0001t0001 a0001c0001t0004 a0001c0001t0005 others(2): Show a0001c0001t0001 a0001c0001t0004 a0001c0001t0005 a0001c0003t0001 a0002c0002t0001	a0001c0001t0001g0211 a0001c0001t0001g0212 a0001c0001t0004g0167 others(4): Show a0001c0001t0001g0211 a0001c0001t0001g0212 a0001c0001t0004g0167 a0001c0001t0005g0026 a0001c0003t0001g0044 a0001c0003t0001g0045 a0002c0002t0001g0250	8	354	0.0226	-20	c.250 others(39): Show c.2501+4144_2501+4163delGAAGGAAGGAAGGAAGGAAG	PCDHGC4	ENSG00000242419.6	transcript	ENST00000306593.2	protein_coding	2/3		INFO_REALIGN_3_PRIME	chr5	TogoVar
PCDHGC5_chr5_141484081_141517975	141498300	GGTCACAC others(13): Show GGTCACACTGCCTACACAGAA	G G	intron_variant intron_variant	MODIFIER	NA18988.hp1 NA18988.hp1	a0002 a0002	a0002c0002 a0002c0002	a0002c0002t0004 a0002c0002t0004	a0002c0002t0004g0239 a0002c0002t0004g0239	1	364	0.0028	-20	c.251 others(39): Show c.2519+3437_2519+3456delTCACACTGCCTACACAGAAG	PCDHGC5	ENSG00000240764.4	transcript	ENST00000252087.3	protein_coding	2/3		INFO_REALIGN_3_PRIME	chr5	TogoVar
PCDHGC5_chr5_141484081_141517975	141498971	GGGAAGGA others(13): Show GGGAAGGAAGGAAGGAAGGAA	G G	intron_variant intron_variant	MODIFIER	HG02723.hp1 HG02809.hp2 HG02896.hp1 others(5): Show HG02723.hp1 HG02809.hp2 HG02896.hp1 HG02897.hp2 HG03041.hp2 HG03490.hp1 HG03492.hp1 NA18949.hp2	a0001 a0002 a0001 a0002	a0001c0003 a0001c0004 a0001c0008 others(2): Show a0001c0003 a0001c0004 a0001c0008 a0001c0010 a0002c0002	a0001c0003t0007 a0001c0004t0001 a0001c0008t0012 others(2): Show a0001c0003t0007 a0001c0004t0001 a0001c0008t0012 a0001c0010t0001 a0002c0002t0004	a0001c0003t0007g0035 a0001c0004t0001g0089 a0001c0008t0012g0076 others(4): Show a0001c0003t0007g0035 a0001c0004t0001g0089 a0001c0008t0012g0076 a0001c0008t0012g0077 a0001c0010t0001g0084 a0001c0010t0001g0085 a0002c0002t0004g0241	8	364	0.0220	-20	c.251 others(39): Show c.2519+4144_2519+4163delGAAGGAAGGAAGGAAGGAAG	PCDHGC5	ENSG00000240764.4	transcript	ENST00000252087.3	protein_coding	2/3		INFO_REALIGN_3_PRIME	chr5	TogoVar

Search by Variant

Search

Search Results