view | regionname | pos | ref | alt | annotation | impact | samples | ahapids | chapids | thapids | thapids | ac | an | af | len | hgvs_c | hgvs_p | genename | geneid | featuretype | featureid | transcript_biotype | rank | cdna cdna pos length
|
cds cds pos length
|
aa aa pos length
|
distance | status | chr | external |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
PTPRD_chr9_8309246_10618002 | 8757635 | TATATATA others(13): Show |
T | intron_variant | MODIFIER | NA19030.hp1 | a0001 | a0001c0001 | a0001c0001t0024 | a0001c0001t0024g0032 | 1 | 34 | 0.0294 | -20 | c.-10 others(41): Show |
PTPRD | ENSG00000153707.19 | transcript | ENST00000381196.9 | protein_coding | 11/45 | chr9 | TogoVar | |||||||
PTPRD_chr9_8309246_10618002 | 8858822 | CACACACA others(13): Show |
C | intron_variant | MODIFIER | HG03225.hp2 | a0001 | a0001c0003 | a0001c0003t0004 | a0001c0003t0004g0027 | 1 | 34 | 0.0294 | -20 | c.-10 others(43): Show |
PTPRD | ENSG00000153707.19 | transcript | ENST00000381196.9 | protein_coding | 11/45 | chr9 | TogoVar | |||||||
PTPRD_chr9_8309246_10618002 | 9019319 | AGAAAGAA others(13): Show |
A | intron_variant | MODIFIER | HG03834.hp1 | a0001 | a0001c0001 | a0001c0001t0001 | a0001c0001t0001g0006 | 1 | 34 | 0.0294 | -20 | c.-14 others(37): Show |
PTPRD | ENSG00000153707.19 | transcript | ENST00000381196.9 | protein_coding | 10/45 | chr9 | TogoVar | |||||||
PTPRD_chr9_8309246_10618002 | 9043904 | AAAAATAA others(13): Show |
A | intron_variant | MODIFIER | HG01099.hp2 HG01109.hp1 HG01243.hp1 others(11): Show |
a0001a0003a0004 | a0001c0001a0001c0002a0001c0003others(8): Show | a0001c0001t0002a0001c0001t0019a0001c0002t0001others(11): Show | a0001c0001t0002g0013 a0001c0001t0019g0023 a0001c0002t0001g0009 others(11): Show |
14 | 34 | 0.4118 | -20 | c.-14 others(41): Show |
PTPRD | ENSG00000153707.19 | transcript | ENST00000381196.9 | protein_coding | 10/45 | chr9 | TogoVar | |||||||
PTPRD_chr9_8309246_10618002 | 9310920 | GATAAATA others(13): Show |
G | intron_variant | MODIFIER | HG02257.hp1 | a0001 | a0001c0018 | a0001c0018t0004 | a0001c0018t0004g0020 | 1 | 34 | 0.0294 | -20 | c.-20 others(41): Show |
PTPRD | ENSG00000153707.19 | transcript | ENST00000381196.9 | protein_coding | 9/45 | chr9 | TogoVar | |||||||
PTPRD_chr9_8309246_10618002 | 9653348 | CAAAAAAA others(13): Show |
C | intron_variant | MODIFIER | HG02559.hp2 | a0001 | a0001c0006 | a0001c0006t0001 | a0001c0006t0001g0019 | 1 | 34 | 0.0294 | -20 | c.-28 others(41): Show |
PTPRD | ENSG00000153707.19 | transcript | ENST00000381196.9 | protein_coding | 7/45 | chr9 | TogoVar | |||||||
PTPRD_chr9_8309246_10618002 | 9760599 | TACACACA others(13): Show |
T | intron_variant | MODIFIER | HG03139.hp2 | a0001 | a0001c0002 | a0001c0002t0005 | a0001c0002t0005g0025 | 1 | 34 | 0.0294 | -20 | c.-32 others(39): Show |
PTPRD | ENSG00000153707.19 | transcript | ENST00000381196.9 | protein_coding | 6/45 | chr9 | TogoVar | |||||||
PTPRD_chr9_8309246_10618002 | 9838172 | TGGACATT others(13): Show |
T | intron_variant | MODIFIER | HG02257.hp1 HG03139.hp2 HG03579.hp1 |
a0001 | a0001c0001a0001c0002a0001c0018 | a0001c0001t0022a0001c0002t0005a0001c0018t0004 | a0001c0001t0022g0012 a0001c0002t0005g0025 a0001c0018t0004g0020 |
3 | 34 | 0.0882 | -20 | c.-36 others(41): Show |
PTPRD | ENSG00000153707.19 | transcript | ENST00000381196.9 | protein_coding | 5/45 | chr9 | TogoVar | |||||||
PTPRD_chr9_8309246_10618002 | 10194343 | TATAGAGA others(13): Show |
T | intron_variant | MODIFIER | HG03225.hp2 | a0001 | a0001c0003 | a0001c0003t0004 | a0001c0003t0004g0027 | 1 | 34 | 0.0294 | -20 | c.-54 others(43): Show |
PTPRD | ENSG00000153707.19 | transcript | ENST00000381196.9 | protein_coding | 3/45 | chr9 | TogoVar | |||||||
PTPRD_chr9_8309246_10618002 | 10194345 | TAGAGAGA others(13): Show |
T | intron_variant | MODIFIER | HG02559.hp2 | a0001 | a0001c0006 | a0001c0006t0001 | a0001c0006t0001g0019 | 1 | 34 | 0.0294 | -20 | c.-54 others(43): Show |
PTPRD | ENSG00000153707.19 | transcript | ENST00000381196.9 | protein_coding | 3/45 | chr9 | TogoVar | |||||||
PTPRD_chr9_8309246_10618002 | 10511956 | ATATATAT others(13): Show |
A | intron_variant | MODIFIER | HG01981.hp2 | a0001 | a0001c0001 | a0001c0001t0019 | a0001c0001t0019g0023 | 1 | 34 | 0.0294 | -20 | c.-60 others(43): Show |
PTPRD | ENSG00000153707.19 | transcript | ENST00000381196.9 | protein_coding | 2/45 | chr9 | TogoVar | |||||||
PTPRD_chr9_8309246_10618002 | 10538239 | AAAATAAA others(13): Show |
A | intron_variant | MODIFIER | HG01243.hp2 | a0001 | a0001c0003 | a0001c0003t0023 | a0001c0003t0023g0031 | 1 | 34 | 0.0294 | -20 | c.-60 others(41): Show |
PTPRD | ENSG00000153707.19 | transcript | ENST00000381196.9 | protein_coding | 2/45 | chr9 | TogoVar | |||||||
PTPRE_chr10_127902103_128090855 | 128010545 | CCTTTTCT others(13): Show |
C | intron_variant | MODIFIER | NA19070.hp1 NA19087.hp2 |
a0001 | a0001c0001a0001c0002 | a0001c0001t0002a0001c0002t0006 | a0001c0001t0002g0262 a0001c0002t0006g0204 |
2 | 304 | 0.0066 | -20 | c.-8+ others(37): Show |
PTPRE | ENSG00000132334.17 | transcript | ENST00000254667.8 | protein_coding | 2/20 | INFO_REALIGN_3_PRIME | chr10 | TogoVar | ||||||
PTPRG_chr3_61556571_62302609 | 61732709 | AAAATAAA others(13): Show |
A | intron_variant | MODIFIER | HG01243.hp2 HG02145.hp1 HG03098.hp2 |
a0001 | a0001c0001 | a0001c0001t0001a0001c0001t0004a0001c0001t0005 | a0001c0001t0001g0090 a0001c0001t0004g0028 a0001c0001t0005g0025 |
3 | 94 | 0.0319 | -20 | c.86- others(37): Show |
PTPRG | ENSG00000144724.20 | transcript | ENST00000474889.6 | protein_coding | 1/29 | INFO_REALIGN_3_PRIME | chr3 | TogoVar | ||||||
PTPRG_chr3_61556571_62302609 | 61792668 | TTTTCTTT others(13): Show |
T | intron_variant | MODIFIER | HG00735.hp1 HG00735.hp2 HG01071.hp2 others(10): Show |
a0001a0002a0003 | a0001c0001a0001c0005a0002c0002others(2): Show | a0001c0001t0001a0001c0001t0006a0001c0005t0017others(4): Show | a0001c0001t0001g0018 a0001c0001t0001g0042 a0001c0001t0001g0043 others(10): Show |
13 | 94 | 0.1383 | -20 | c.190 others(39): Show |
PTPRG | ENSG00000144724.20 | transcript | ENST00000474889.6 | protein_coding | 2/29 | INFO_REALIGN_3_PRIME | chr3 | TogoVar | ||||||
PTPRG_chr3_61556571_62302609 | 61813543 | CTGTGTGT others(13): Show |
C | intron_variant | MODIFIER | HG02723.hp1 HG02809.hp1 HG02970.hp1 |
a0001a0002a0004 | a0001c0008a0002c0002a0004c0006 | a0001c0008t0005a0002c0002t0001a0004c0006t0001 | a0001c0008t0005g0068 a0002c0002t0001g0064 a0004c0006t0001g0027 |
3 | 94 | 0.0319 | -20 | c.190 others(39): Show |
PTPRG | ENSG00000144724.20 | transcript | ENST00000474889.6 | protein_coding | 2/29 | INFO_REALIGN_3_PRIME | chr3 | TogoVar | ||||||
PTPRG_chr3_61556571_62302609 | 61871153 | GTGTTGTG others(13): Show |
G | intron_variant | MODIFIER | HG02258.hp2 | a0006 | a0006c0007 | a0006c0007t0004 | a0006c0007t0004g0060 | 1 | 94 | 0.0106 | -20 | c.191 others(41): Show |
PTPRG | ENSG00000144724.20 | transcript | ENST00000474889.6 | protein_coding | 2/29 | INFO_REALIGN_3_PRIME | chr3 | TogoVar | ||||||
PTPRG_chr3_61556571_62302609 | 61871158 | GTGTTGTG others(13): Show |
G | intron_variant | MODIFIER | HG00735.hp2 HG02027.hp1 HG02723.hp1 others(1): Show |
a0001a0002a0004 | a0001c0001a0001c0008a0002c0003others(1): Show | a0001c0001t0001a0001c0008t0005a0002c0003t0008others(1): Show | a0001c0001t0001g0057 a0001c0008t0005g0030 a0002c0003t0008g0016 others(1): Show |
4 | 94 | 0.0426 | -20 | c.191 others(41): Show |
PTPRG | ENSG00000144724.20 | transcript | ENST00000474889.6 | protein_coding | 2/29 | INFO_REALIGN_3_PRIME | chr3 | TogoVar | ||||||
PTPRG_chr3_61556571_62302609 | 61871163 | GTGTTATG others(13): Show |
G | intron_variant | MODIFIER | HG01099.hp1 HG01255.hp2 HG02109.hp1 others(2): Show |
a0001a0003a0007 | a0001c0001a0001c0005a0003c0004others(1): Show | a0001c0001t0001a0001c0001t0003a0001c0005t0001others(2): Show | a0001c0001t0001g0077 a0001c0001t0003g0023 a0001c0005t0001g0040 others(2): Show |
5 | 94 | 0.0532 | -20 | c.191 others(41): Show |
PTPRG | ENSG00000144724.20 | transcript | ENST00000474889.6 | protein_coding | 2/29 | INFO_REALIGN_3_PRIME | chr3 | TogoVar | ||||||
PTPRG_chr3_61556571_62302609 | 61887119 | CATGCATA others(13): Show |
C | intron_variant | MODIFIER | HG03540.hp1 NA19240.hp2 |
a0001a0006 | a0001c0019a0006c0007 | a0001c0019t0001a0006c0007t0004 | a0001c0019t0001g0069 a0006c0007t0004g0031 |
2 | 94 | 0.0213 | -20 | c.191 others(41): Show |
PTPRG | ENSG00000144724.20 | transcript | ENST00000474889.6 | protein_coding | 2/29 | INFO_REALIGN_3_PRIME | chr3 | TogoVar | ||||||
PTPRG_chr3_61556571_62302609 | 61906778 | TGTAGGTA others(13): Show |
T | intron_variant | MODIFIER | HG00735.hp1 HG01071.hp1 HG02040.hp1 others(10): Show |
a0001a0002a0003 | a0001c0001a0001c0005a0001c0008others(2): Show | a0001c0001t0001a0001c0001t0002a0001c0001t0007others(6): Show | a0001c0001t0001g0001 a0001c0001t0001g0034 a0001c0001t0001g0072 others(10): Show |
13 | 94 | 0.1383 | -20 | c.191 others(39): Show |
PTPRG | ENSG00000144724.20 | transcript | ENST00000474889.6 | protein_coding | 2/29 | INFO_REALIGN_3_PRIME | chr3 | TogoVar | ||||||
PTPRG_chr3_61556571_62302609 | 61939928 | CTTTTTTT others(13): Show |
C | intron_variant | MODIFIER | HG02109.hp2 | a0001 | a0001c0001 | a0001c0001t0004 | a0001c0001t0004g0026 | 1 | 94 | 0.0106 | -20 | c.191 others(39): Show |
PTPRG | ENSG00000144724.20 | transcript | ENST00000474889.6 | protein_coding | 2/29 | INFO_REALIGN_3_PRIME | chr3 | TogoVar | ||||||
PTPRG_chr3_61556571_62302609 | 62092063 | GACACACA others(13): Show |
G | intron_variant | MODIFIER | HG00280.hp1 HG00639.hp2 HG00735.hp1 others(19): Show |
a0001a0002a0004others(1): Show | a0001c0001a0001c0005a0001c0016others(4): Show | a0001c0001t0001a0001c0001t0002a0001c0001t0003others(10): Show | a0001c0001t0001g0006 a0001c0001t0001g0033 a0001c0001t0001g0034 others(19): Show |
22 | 94 | 0.2340 | -20 | c.615 others(39): Show |
PTPRG | ENSG00000144724.20 | transcript | ENST00000474889.6 | protein_coding | 5/29 | INFO_REALIGN_3_PRIME | chr3 | TogoVar | ||||||
PTPRH_chr19_55176247_55214501 | 55178753 | ATTTTTTT others(13): Show |
A | downstream_gene_variant | MODIFIER | HG02027.hp2 | a0018 | a0018c0029 | a0018c0029t0003 | a0018c0029t0003g0062 | 1 | 378 | 0.0027 | -20 | c.*29 others(31): Show |
PTPRH | ENSG00000080031.10 | transcript | ENST00000376350.8 | protein_coding | 2493 | chr19 | TogoVar | |||||||
PTPRJ_chr11_47975559_48175839 | 48049515 | TAAAACAA others(13): Show |
T | intron_variant | MODIFIER | HG01109.hp2 HG01884.hp1 HG02055.hp1 others(5): Show |
a0001a0002a0005 | a0001c0004a0002c0001a0005c0012 | a0001c0004t0012a0001c0004t0045a0002c0001t0007others(1): Show | a0001c0004t0012g0039 a0001c0004t0012g0043 a0001c0004t0012g0044 others(5): Show |
8 | 216 | 0.0370 | -20 | c.97- others(37): Show |
PTPRJ | ENSG00000149177.15 | transcript | ENST00000418331.7 | protein_coding | 1/24 | INFO_REALIGN_3_PRIME | chr11 | TogoVar | ||||||
PTPRJ_chr11_47975559_48175839 | 48053160 | TATATATA others(13): Show |
T | intron_variant | MODIFIER | HG00597.hp2 HG01071.hp1 HG01099.hp2 others(17): Show |
a0002a0009a0021 | a0002c0001a0009c0014a0021c0025 | a0002c0001t0002a0002c0001t0004a0002c0001t0007others(8): Show | a0002c0001t0002g0026 a0002c0001t0002g0211 a0002c0001t0004g0052 others(17): Show |
20 | 216 | 0.0926 | -20 | c.97- others(37): Show |
PTPRJ | ENSG00000149177.15 | transcript | ENST00000418331.7 | protein_coding | 1/24 | INFO_REALIGN_3_PRIME | chr11 | TogoVar | ||||||
PTPRJ_chr11_47975559_48175839 | 48117540 | CAAAAAAA others(13): Show |
C | intron_variant | MODIFIER | HG02615.hp2 HG02622.hp1 HG02717.hp1 others(3): Show |
a0007a0018 | a0007c0010a0018c0026 | a0007c0010t0013a0007c0010t0016a0007c0010t0022others(2): Show | a0007c0010t0013g0007 a0007c0010t0016g0010 a0007c0010t0022g0009 others(3): Show |
6 | 216 | 0.0278 | -20 | c.353 others(37): Show |
PTPRJ | ENSG00000149177.15 | transcript | ENST00000418331.7 | protein_coding | 3/24 | INFO_REALIGN_3_PRIME | chr11 | TogoVar | ||||||
PTPRJ_chr11_47975559_48175839 | 48168532 | GTGTATAT others(13): Show |
G | 3_prime_UTR_variant | MODIFIER | HG01891.hp2 | a0003 | a0003c0002 | a0003c0002t0061 | a0003c0002t0061g0183 | 1 | 216 | 0.0046 | -20 | c.*11 others(31): Show |
PTPRJ | ENSG00000149177.15 | transcript | ENST00000418331.7 | protein_coding | 25/25 | 1172 | INFO_REALIGN_3_PRIME | chr11 | TogoVar | |||||
PTPRK_chr6_127963785_128525599 | 128435098 | AAGGAAGG others(13): Show |
A | intron_variant | MODIFIER | HG03471.hp2 | a0001 | a0001c0001 | a0001c0001t0001 | a0001c0001t0001g0033 | 1 | 53 | 0.0189 | -20 | c.101 others(39): Show |
PTPRK | ENSG00000152894.15 | transcript | ENST00000368226.9 | protein_coding | 1/29 | chr6 | TogoVar | |||||||
PTPRK_chr6_127963785_128525599 | 128435102 | AAGGAAGG others(13): Show |
A | intron_variant | MODIFIER | HG02559.hp1 HG02647.hp2 HG03195.hp2 others(1): Show |
a0001 | a0001c0001a0001c0005 | a0001c0001t0001a0001c0005t0003 | a0001c0001t0001g0008 a0001c0001t0001g0009 a0001c0001t0001g0030 others(1): Show |
4 | 53 | 0.0755 | -20 | c.101 others(39): Show |
PTPRK | ENSG00000152894.15 | transcript | ENST00000368226.9 | protein_coding | 1/29 | chr6 | TogoVar | |||||||
PTPRK_chr6_127963785_128525599 | 128435126 | AAGGCAGG others(13): Show |
A | intron_variant | MODIFIER | NA18906.hp1 | a0001 | a0001c0001 | a0001c0001t0001 | a0001c0001t0001g0046 | 1 | 53 | 0.0189 | -20 | c.101 others(39): Show |
PTPRK | ENSG00000152894.15 | transcript | ENST00000368226.9 | protein_coding | 1/29 | chr6 | TogoVar | |||||||
PTPRK_chr6_127963785_128525599 | 128464620 | CATATATA others(13): Show |
C | intron_variant | MODIFIER | HG02486.hp2 HG02559.hp1 HG02559.hp2 others(3): Show |
a0001 | a0001c0001a0001c0004a0001c0005others(2): Show | a0001c0001t0001a0001c0004t0001a0001c0005t0003others(2): Show | a0001c0001t0001g0003 a0001c0001t0001g0030 a0001c0004t0001g0006 others(3): Show |
6 | 53 | 0.1132 | -20 | c.100 others(39): Show |
PTPRK | ENSG00000152894.15 | transcript | ENST00000368226.9 | protein_coding | 1/29 | chr6 | TogoVar | |||||||
PTPRK_chr6_127963785_128525599 | 128493591 | TACACACA others(13): Show |
T | intron_variant | MODIFIER | HG00280.hp2 HG02486.hp2 HG02559.hp1 others(3): Show |
a0001 | a0001c0001a0001c0005 | a0001c0001t0001a0001c0005t0003 | a0001c0001t0001g0003 a0001c0001t0001g0018 a0001c0001t0001g0030 others(3): Show |
6 | 53 | 0.1132 | -20 | c.100 others(39): Show |
PTPRK | ENSG00000152894.15 | transcript | ENST00000368226.9 | protein_coding | 1/29 | chr6 | TogoVar | |||||||
PTPRM_chr18_7562316_8411856 | 7772349 | CTCTTTCT others(13): Show |
C | intron_variant | MODIFIER | NA18959.hp2 NA21309.hp2 |
a0001 | a0001c0002a0001c0014 | a0001c0002t0001a0001c0014t0001 | a0001c0002t0001g0052 a0001c0014t0001g0014 |
2 | 80 | 0.0250 | -20 | c.74- others(35): Show |
PTPRM | ENSG00000173482.17 | transcript | ENST00000580170.6 | protein_coding | 1/32 | INFO_REALIGN_3_PRIME | chr18 | TogoVar | ||||||
PTPRM_chr18_7562316_8411856 | 7772444 | CCCTTCCT others(13): Show |
C | intron_variant | MODIFIER | HG00673.hp1 HG00741.hp1 HG00741.hp2 others(10): Show |
a0001 | a0001c0001a0001c0002a0001c0003others(2): Show | a0001c0001t0001a0001c0001t0002a0001c0001t0005others(5): Show | a0001c0001t0001g0001 a0001c0001t0001g0045 a0001c0001t0001g0059 others(10): Show |
13 | 80 | 0.1625 | -20 | c.74- others(35): Show |
PTPRM | ENSG00000173482.17 | transcript | ENST00000580170.6 | protein_coding | 1/32 | INFO_REALIGN_3_PRIME | chr18 | TogoVar | ||||||
PTPRM_chr18_7562316_8411856 | 7834415 | ATATGTAT others(13): Show |
A | intron_variant | MODIFIER | HG00639.hp1 HG00639.hp2 HG00673.hp1 others(61): Show |
a0001a0002a0003 | a0001c0001a0001c0002a0001c0003others(18): Show | a0001c0001t0001a0001c0001t0002a0001c0001t0003others(32): Show | a0001c0001t0001g0001 a0001c0001t0001g0007 a0001c0001t0001g0008 others(61): Show |
64 | 80 | 0.8000 | -20 | c.197 others(39): Show |
PTPRM | ENSG00000173482.17 | transcript | ENST00000580170.6 | protein_coding | 2/32 | INFO_REALIGN_3_PRIME | chr18 | TogoVar | ||||||
PTPRM_chr18_7562316_8411856 | 8125976 | CATATATA others(13): Show |
C | intron_variant | MODIFIER | HG02451.hp2 | a0001 | a0001c0018 | a0001c0018t0003 | a0001c0018t0003g0079 | 1 | 80 | 0.0125 | -20 | c.216 others(41): Show |
PTPRM | ENSG00000173482.17 | transcript | ENST00000580170.6 | protein_coding | 13/32 | INFO_REALIGN_3_PRIME | chr18 | TogoVar | ||||||
PTPRM_chr18_7562316_8411856 | 8240647 | GAGAGAGA others(13): Show |
G | intron_variant | MODIFIER | HG02040.hp1 HG02622.hp1 NA18612.hp2 others(1): Show |
a0001 | a0001c0001a0001c0002 | a0001c0001t0001a0001c0001t0002a0001c0002t0001others(1): Show | a0001c0001t0001g0051 a0001c0001t0002g0031 a0001c0002t0001g0052 others(1): Show |
4 | 80 | 0.0500 | -20 | c.230 others(39): Show |
PTPRM | ENSG00000173482.17 | transcript | ENST00000580170.6 | protein_coding | 14/32 | INFO_REALIGN_3_PRIME | chr18 | TogoVar | ||||||
PTPRM_chr18_7562316_8411856 | 8356207 | GAAGCTTA others(13): Show |
G | intron_variant | MODIFIER | HG01106.hp1 HG01515.hp2 HG01884.hp2 others(15): Show |
a0001a0002 | a0001c0001a0001c0002a0001c0003others(5): Show | a0001c0001t0001a0001c0001t0003a0001c0001t0004others(10): Show | a0001c0001t0001g0008 a0001c0001t0001g0020 a0001c0001t0001g0045 others(15): Show |
18 | 80 | 0.2250 | -20 | c.305 others(41): Show |
PTPRM | ENSG00000173482.17 | transcript | ENST00000580170.6 | protein_coding | 23/32 | INFO_REALIGN_3_PRIME | chr18 | TogoVar | ||||||
PTPRT_chr20_42067756_43194906 | 42276496 | AATATATA others(13): Show |
A | intron_variant | MODIFIER | HG00738.hp2 NA19030.hp1 |
a0001 | a0001c0021a0001c0025 | a0001c0021t0001a0001c0025t0015 | a0001c0021t0001g0053 a0001c0025t0015g0028 |
2 | 62 | 0.0323 | -20 | c.217 others(39): Show |
PTPRT | ENSG00000196090.14 | transcript | ENST00000373187.6 | protein_coding | 13/30 | chr20 | TogoVar | |||||||
PTPRT_chr20_42067756_43194906 | 42489008 | TTGTGTGT others(13): Show |
T | intron_variant | MODIFIER | HG02280.hp1 | a0004 | a0004c0006 | a0004c0006t0009 | a0004c0006t0009g0051 | 1 | 62 | 0.0161 | -20 | c.115 others(41): Show |
PTPRT | ENSG00000196090.14 | transcript | ENST00000373187.6 | protein_coding | 7/30 | chr20 | TogoVar | |||||||
PTPRT_chr20_42067756_43194906 | 43140443 | AGTGTGTG others(13): Show |
A | intron_variant | MODIFIER | HG00140.hp1 HG00140.hp2 HG00438.hp1 others(15): Show |
a0001a0002a0005 | a0001c0003a0001c0007a0001c0008others(8): Show | a0001c0003t0029a0001c0007t0001a0001c0007t0004others(13): Show | a0001c0003t0029g0048 a0001c0007t0001g0061 a0001c0007t0004g0062 others(15): Show |
18 | 62 | 0.2903 | -20 | c.88+ others(37): Show |
PTPRT | ENSG00000196090.14 | transcript | ENST00000373187.6 | protein_coding | 1/30 | chr20 | TogoVar | |||||||
PTPRU_chr1_29231522_29331800 | 29329034 | GAGGTGGC others(13): Show |
G | downstream_gene_variant | MODIFIER | HG01069.hp1 HG01069.hp2 HG01071.hp1 others(19): Show |
a0001a0002a0003others(2): Show | a0001c0001a0001c0002a0001c0027others(6): Show | a0001c0001t0001a0001c0002t0001a0001c0002t0002others(7): Show | a0001c0001t0001g0075 a0001c0001t0001g0089 a0001c0001t0001g0090 others(19): Show |
22 | 296 | 0.0743 | -20 | c.*33 others(31): Show |
PTPRU | ENSG00000060656.20 | transcript | ENST00000373779.8 | protein_coding | 2235 | chr1 | TogoVar | |||||||
PTPRZ1_chr7_121868161_122067036 | 121892679 | CATATATA others(13): Show |
C | intron_variant | MODIFIER | HG00609.hp2 HG00639.hp2 HG00642.hp1 others(53): Show |
a0001a0002a0004others(4): Show | a0001c0001a0002c0002a0002c0006others(6): Show | a0001c0001t0002a0001c0001t0004a0001c0001t0007others(9): Show | a0001c0001t0002g0049 a0001c0001t0002g0050 a0001c0001t0002g0051 others(53): Show |
56 | 312 | 0.1795 | -20 | c.58+ others(37): Show |
PTPRZ1 | ENSG00000106278.12 | transcript | ENST00000393386.7 | protein_coding | 1/29 | INFO_REALIGN_3_PRIME | chr7 | TogoVar | ||||||
PTPRZ1_chr7_121868161_122067036 | 122000646 | CATATATA others(13): Show |
C | intron_variant | MODIFIER | HG02922.hp2 NA18968.hp2 |
a0003a0014 | a0003c0003a0014c0029 | a0003c0003t0003a0014c0029t0002 | a0003c0003t0003g0183 a0014c0029t0002g0044 |
2 | 312 | 0.0064 | -20 | c.124 others(39): Show |
PTPRZ1 | ENSG00000106278.12 | transcript | ENST00000393386.7 | protein_coding | 10/29 | INFO_REALIGN_3_PRIME | chr7 | TogoVar | ||||||
PTPRZ1_chr7_121868161_122067036 | 122040729 | CGTGTGTG others(13): Show |
C | intron_variant | MODIFIER | HG01361.hp1 HG02615.hp2 HG02818.hp1 others(1): Show |
a0001a0002a0007 | a0001c0001a0002c0002a0007c0034 | a0001c0001t0004a0002c0002t0001a0007c0034t0006 | a0001c0001t0004g0015 a0001c0001t0004g0016 a0002c0002t0001g0266 others(1): Show |
4 | 312 | 0.0128 | -20 | c.563 others(35): Show |
PTPRZ1 | ENSG00000106278.12 | transcript | ENST00000393386.7 | protein_coding | 20/29 | INFO_REALIGN_3_PRIME | chr7 | TogoVar | ||||||
PTRHD1_chr2_24784728_24798391 | 24788580 | TTTTTTTT others(13): Show |
T | downstream_gene_variant | MODIFIER | HG00438.hp2 HG00621.hp2 HG00673.hp2 others(63): Show |
a0001 | a0001c0001 | a0001c0001t0001 | a0001c0001t0001g0003 a0001c0001t0001g0007 a0001c0001t0001g0010 others(2): Show |
66 | 408 | 0.1618 | -20 | c.*18 others(31): Show |
PTRHD1 | ENSG00000184924.6 | transcript | ENST00000328379.6 | protein_coding | 1147 | chr2 | TogoVar | |||||||
PTTG1IP2_chr7_90464639_90518397 | 90472279 | AACACACA others(13): Show |
A | intron_variant | MODIFIER | HG02647.hp2 HG03471.hp2 NA20300.hp1 |
a0001 | a0001c0001 | a0001c0001t0001 | a0001c0001t0001g0148 a0001c0001t0001g0149 a0001c0001t0001g0150 |
3 | 384 | 0.0078 | -20 | c.145 others(37): Show |
PTTG1IP2 | ENSG00000251154.2 | transcript | ENST00000509356.2 | protein_coding | 1/6 | INFO_REALIGN_3_PRIME | chr7 | TogoVar | ||||||
PTTG1IP2_chr7_90464639_90518397 | 90514153 | AAGACTCT others(13): Show |
A | downstream_gene_variant | MODIFIER | HG03688.hp2 | a0001 | a0001c0001 | a0001c0001t0001 | a0001c0001t0001g0090 | 1 | 384 | 0.0026 | -20 | c.*92 others(29): Show |
PTTG1IP2 | ENSG00000251154.2 | transcript | ENST00000509356.2 | protein_coding | 757 | chr7 | TogoVar | |||||||
PUF60_chr8_143811344_143834315 | 143824248 | AGGCAGGC others(13): Show |
A | intron_variant | MODIFIER | HG02300.hp1 | a0001 | a0001c0001 | a0001c0001t0001 | a0001c0001t0001g0093 | 1 | 397 | 0.0025 | -20 | c.111 others(33): Show |
PUF60 | ENSG00000179950.15 | transcript | ENST00000526683.6 | protein_coding | 2/11 | chr8 | TogoVar |