view | regionname | pos | ref | alt | annotation | impact | samples | ahapids | chapids | thapids | thapids | ac | an | af | len | hgvs_c | hgvs_p | genename | geneid | featuretype | featureid | transcript_biotype | rank | cdna cdna pos length
|
cds cds pos length
|
aa aa pos length
|
distance | status | chr | external |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
SOCS7_chr17_38346844_38410593 | 38390640 | TTTCCTTC others(13): Show |
T | intron_variant | MODIFIER | HG00642.hp1 HG01256.hp2 HG01257.hp1 others(5): Show |
a0001 | a0001c0002a0001c0004 | a0001c0002t0002a0001c0004t0030a0001c0004t0032 | a0001c0002t0002g0001 a0001c0002t0002g0047 a0001c0002t0002g0048 others(4): Show |
8 | 78 | 0.1026 | -20 | c.168 others(39): Show |
SOCS7 | ENSG00000274211.6 | transcript | ENST00000612932.6 | protein_coding | 7/9 | INFO_REALIGN_3_PRIME | chr17 | TogoVar | ||||||
SOGA1_chr20_36772447_36868538 | 36858461 | AAAACACA others(13): Show |
A | intron_variant | MODIFIER | HG00140.hp1 HG00733.hp1 HG00733.hp2 others(7): Show |
a0001 | a0001c0001a0001c0002a0001c0003 | a0001c0001t0006a0001c0001t0021a0001c0002t0001others(2): Show | a0001c0001t0006g0003 a0001c0001t0021g0006 a0001c0002t0001g0095 others(7): Show |
10 | 198 | 0.0505 | -20 | c.687 others(37): Show |
SOGA1 | ENSG00000149639.15 | transcript | ENST00000237536.9 | protein_coding | 1/14 | chr20 | TogoVar | |||||||
SON_chr21_33538038_33582481 | 33577604 | TACACACA others(13): Show |
T | downstream_gene_variant | MODIFIER | HG01074.hp1 HG01167.hp1 HG01167.hp2 others(12): Show |
a0001a0002a0004others(2): Show | a0001c0001a0001c0002a0001c0033others(4): Show | a0001c0001t0001a0001c0002t0001a0001c0033t0001others(4): Show | a0001c0001t0001g0001 a0001c0001t0001g0004 a0001c0001t0001g0010 others(10): Show |
15 | 73 | 0.2055 | -20 | c.*11 others(31): Show |
SON | ENSG00000159140.23 | transcript | ENST00000356577.10 | protein_coding | 124 | chr21 | TogoVar | |||||||
SON_chr21_33538038_33582481 | 33580463 | CAAAAAAA others(13): Show |
C | downstream_gene_variant | MODIFIER | HG02055.hp1 HG02165.hp1 |
a0001 | a0001c0001 | a0001c0001t0001 | a0001c0001t0001g0004 a0001c0001t0001g0104 |
2 | 10 | 0.2000 | -20 | c.*40 others(31): Show |
SON | ENSG00000159140.23 | transcript | ENST00000356577.10 | protein_coding | 2983 | chr21 | TogoVar | |||||||
SORBS2_chr4_185580523_185817194 | 185731858 | CTCTCTCT others(13): Show |
C | intron_variant | MODIFIER | NA20300.hp2 | a0001 | a0001c0001 | a0001c0001t0002 | a0001c0001t0002g0303 | 1 | 299 | 0.0033 | -20 | c.-41 others(37): Show |
SORBS2 | ENSG00000154556.20 | transcript | ENST00000695409.1 | protein_coding | 3/26 | chr4 | TogoVar | |||||||
SORBS2_chr4_185580523_185817194 | 185731860 | CTCTCTCT others(13): Show |
C | intron_variant | MODIFIER | HG02055.hp1 | a0001 | a0001c0004 | a0001c0004t0014 | a0001c0004t0014g0037 | 1 | 289 | 0.0035 | -20 | c.-41 others(37): Show |
SORBS2 | ENSG00000154556.20 | transcript | ENST00000695409.1 | protein_coding | 3/26 | chr4 | TogoVar | |||||||
SORBS2_chr4_185580523_185817194 | 185731862 | CTCTCTAT others(13): Show |
C | intron_variant | MODIFIER | HG01192.hp2 | a0001 | a0001c0001 | a0001c0001t0002 | a0001c0001t0002g0086 | 1 | 280 | 0.0036 | -20 | c.-41 others(37): Show |
SORBS2 | ENSG00000154556.20 | transcript | ENST00000695409.1 | protein_coding | 3/26 | chr4 | TogoVar | |||||||
SORBS2_chr4_185580523_185817194 | 185731864 | CTCTATAT others(13): Show |
C | intron_variant | MODIFIER | HG01081.hp2 HG03453.hp2 |
a0001a0002 | a0001c0001a0002c0012 | a0001c0001t0001a0002c0012t0005 | a0001c0001t0001g0104 a0002c0012t0005g0217 |
2 | 262 | 0.0076 | -20 | c.-41 others(37): Show |
SORBS2 | ENSG00000154556.20 | transcript | ENST00000695409.1 | protein_coding | 3/26 | chr4 | TogoVar | |||||||
SORBS2_chr4_185580523_185817194 | 185731866 | CTATATAT others(13): Show |
C | intron_variant | MODIFIER | HG03540.hp2 NA19060.hp2 |
a0001a0009 | a0001c0001a0009c0032 | a0001c0001t0003a0009c0032t0003 | a0001c0001t0003g0186 a0009c0032t0003g0036 |
2 | 201 | 0.0100 | -20 | c.-41 others(37): Show |
SORBS2 | ENSG00000154556.20 | transcript | ENST00000695409.1 | protein_coding | 3/26 | chr4 | TogoVar | |||||||
SORBS2_chr4_185580523_185817194 | 185806434 | CTATTTTT others(13): Show |
C | intron_variant | MODIFIER | HG01081.hp2 | a0001 | a0001c0001 | a0001c0001t0001 | a0001c0001t0001g0104 | 1 | 5 | 0.2000 | -20 | c.-23 others(39): Show |
SORBS2 | ENSG00000154556.20 | transcript | ENST00000695409.1 | protein_coding | 1/26 | chr4 | TogoVar | |||||||
SORBS3_chr8_22546927_22580788 | 22580471 | AAGCCCCT others(13): Show |
A | downstream_gene_variant | MODIFIER | NA19065.hp2 | a0001 | a0001c0001 | a0001c0001t0001 | a0001c0001t0001g0036 | 1 | 428 | 0.0023 | -20 | c.*57 others(31): Show |
SORBS3 | ENSG00000120896.14 | transcript | ENST00000240123.12 | protein_coding | 4684 | chr8 | TogoVar | |||||||
SORCS1_chr10_106568663_107169706 | 106926850 | CACACACA others(13): Show |
C | intron_variant | MODIFIER | HG00639.hp2 | a0001 | a0001c0005 | a0001c0005t0001 | a0001c0005t0001g0062 | 1 | 130 | 0.0077 | -20 | c.626 others(39): Show |
SORCS1 | ENSG00000108018.17 | transcript | ENST00000263054.11 | protein_coding | 2/25 | chr10 | TogoVar | |||||||
SORCS2_chr4_7187538_7747827 | 7262375 | TATCCATC others(13): Show |
T | intron_variant | MODIFIER | HG02165.hp1 HG02280.hp1 HG02451.hp2 others(12): Show |
a0001a0003a0004others(3): Show | a0001c0001a0001c0002a0001c0003others(8): Show | a0001c0001t0003a0001c0001t0006a0001c0001t0013others(12): Show | a0001c0001t0003g0168 a0001c0001t0006g0125 a0001c0001t0013g0099 others(12): Show |
15 | 37 | 0.4054 | -20 | c.480 others(39): Show |
SORCS2 | ENSG00000184985.17 | transcript | ENST00000507866.6 | protein_coding | 1/26 | INFO_REALIGN_3_PRIME | chr4 | TogoVar | ||||||
SORCS2_chr4_7187538_7747827 | 7374109 | TTCTTTCT others(13): Show |
T | intron_variant | MODIFIER | HG00099.hp2 HG00642.hp2 HG01123.hp2 others(22): Show |
a0001a0002a0003others(5): Show | a0001c0001a0001c0002a0001c0009others(11): Show | a0001c0001t0002a0001c0001t0005a0001c0001t0010others(22): Show | a0001c0001t0002g0067 a0001c0001t0005g0085 a0001c0001t0010g0129 others(22): Show |
25 | 168 | 0.1488 | -20 | c.481 others(39): Show |
SORCS2 | ENSG00000184985.17 | transcript | ENST00000507866.6 | protein_coding | 1/26 | INFO_REALIGN_3_PRIME | chr4 | TogoVar | ||||||
SORCS2_chr4_7187538_7747827 | 7449197 | CCCTCCCT others(13): Show |
C | intron_variant | MODIFIER | HG02257.hp1 HG02486.hp2 NA19043.hp2 |
a0001a0005a0012 | a0001c0001a0005c0022a0012c0039 | a0001c0001t0003a0005c0022t0033a0012c0039t0049 | a0001c0001t0003g0168 a0005c0022t0033g0153 a0012c0039t0049g0064 |
3 | 165 | 0.0182 | -20 | c.548 others(39): Show |
SORCS2 | ENSG00000184985.17 | transcript | ENST00000507866.6 | protein_coding | 2/26 | INFO_REALIGN_3_PRIME | chr4 | TogoVar | ||||||
SORCS2_chr4_7187538_7747827 | 7453718 | CTGTGTTG others(13): Show |
C | intron_variant | MODIFIER | HG02132.hp2 | a0001 | a0001c0001 | a0001c0001t0048 | a0001c0001t0048g0094 | 1 | 168 | 0.0060 | -20 | c.548 others(39): Show |
SORCS2 | ENSG00000184985.17 | transcript | ENST00000507866.6 | protein_coding | 2/26 | INFO_REALIGN_3_PRIME | chr4 | TogoVar | ||||||
SORCS2_chr4_7187538_7747827 | 7453946 | AGCTGTGT others(13): Show |
A | intron_variant | MODIFIER | HG01070.hp2 HG01109.hp1 HG01109.hp2 others(20): Show |
a0001a0002a0003others(2): Show | a0001c0001a0001c0002a0001c0003others(9): Show | a0001c0001t0002a0001c0001t0004a0001c0001t0012others(18): Show | a0001c0001t0002g0130 a0001c0001t0004g0048 a0001c0001t0012g0036 others(20): Show |
23 | 168 | 0.1369 | -20 | c.548 others(39): Show |
SORCS2 | ENSG00000184985.17 | transcript | ENST00000507866.6 | protein_coding | 2/26 | INFO_REALIGN_3_PRIME | chr4 | TogoVar | ||||||
SORCS2_chr4_7187538_7747827 | 7454180 | CTGTGTTG others(13): Show |
C | intron_variant | MODIFIER | HG01258.hp2 HG02300.hp1 HG02559.hp1 others(3): Show |
a0001a0002a0003 | a0001c0001a0001c0005a0002c0004others(1): Show | a0001c0001t0003a0001c0001t0009a0001c0005t0008others(2): Show | a0001c0001t0003g0097 a0001c0001t0009g0142 a0001c0005t0008g0065 others(3): Show |
6 | 168 | 0.0357 | -20 | c.548 others(39): Show |
SORCS2 | ENSG00000184985.17 | transcript | ENST00000507866.6 | protein_coding | 2/26 | INFO_REALIGN_3_PRIME | chr4 | TogoVar | ||||||
SORCS2_chr4_7187538_7747827 | 7455020 | AGTGTGTT others(13): Show |
A | intron_variant | MODIFIER | HG00099.hp1 HG00323.hp2 HG00438.hp1 others(80): Show |
a0001a0002a0003others(7): Show | a0001c0001a0001c0002a0001c0003others(23): Show | a0001c0001t0002a0001c0001t0003a0001c0001t0004others(63): Show | a0001c0001t0002g0130 a0001c0001t0003g0097 a0001c0001t0003g0138 others(80): Show |
83 | 168 | 0.4940 | -20 | c.548 others(39): Show |
SORCS2 | ENSG00000184985.17 | transcript | ENST00000507866.6 | protein_coding | 2/26 | INFO_REALIGN_3_PRIME | chr4 | TogoVar | ||||||
SORCS2_chr4_7187538_7747827 | 7455576 | AGCTGTGT others(13): Show |
A | intron_variant | MODIFIER | HG02257.hp2 HG02630.hp1 |
a0001 | a0001c0001a0001c0048 | a0001c0001t0013a0001c0048t0001 | a0001c0001t0013g0011 a0001c0048t0001g0146 |
2 | 168 | 0.0119 | -20 | c.548 others(39): Show |
SORCS2 | ENSG00000184985.17 | transcript | ENST00000507866.6 | protein_coding | 2/26 | INFO_REALIGN_3_PRIME | chr4 | TogoVar | ||||||
SORCS2_chr4_7187538_7747827 | 7477406 | TGGGGCTG others(13): Show |
T | intron_variant | MODIFIER | HG00099.hp1 HG00438.hp1 HG01109.hp1 others(3): Show |
a0001a0002a0005 | a0001c0001a0001c0002a0001c0003others(2): Show | a0001c0001t0007a0001c0001t0012a0001c0002t0044others(3): Show | a0001c0001t0007g0111 a0001c0001t0012g0047 a0001c0002t0044g0019 others(3): Show |
6 | 168 | 0.0357 | -20 | c.549 others(39): Show |
SORCS2 | ENSG00000184985.17 | transcript | ENST00000507866.6 | protein_coding | 2/26 | INFO_REALIGN_3_PRIME | chr4 | TogoVar | ||||||
SORCS2_chr4_7187538_7747827 | 7540161 | TCTCCCTG others(13): Show |
T | intron_variant | MODIFIER | HG02257.hp1 HG02258.hp1 HG02280.hp2 others(3): Show |
a0001a0003a0006others(1): Show | a0001c0001a0001c0003a0001c0041others(3): Show | a0001c0001t0003a0001c0003t0020a0001c0041t0006others(3): Show | a0001c0001t0003g0168 a0001c0003t0020g0043 a0001c0041t0006g0031 others(3): Show |
6 | 21 | 0.2857 | -20 | c.648 others(37): Show |
SORCS2 | ENSG00000184985.17 | transcript | ENST00000507866.6 | protein_coding | 3/26 | INFO_REALIGN_3_PRIME | chr4 | TogoVar | ||||||
SORCS2_chr4_7187538_7747827 | 7543396 | CATCCATC others(13): Show |
C | intron_variant | MODIFIER | HG00438.hp2 | a0001 | a0001c0002 | a0001c0002t0002 | a0001c0002t0002g0133 | 1 | 168 | 0.0060 | -20 | c.648 others(39): Show |
SORCS2 | ENSG00000184985.17 | transcript | ENST00000507866.6 | protein_coding | 3/26 | INFO_REALIGN_3_PRIME | chr4 | TogoVar | ||||||
SORCS2_chr4_7187538_7747827 | 7543707 | TCCACCCA others(13): Show |
T | intron_variant | MODIFIER | HG01109.hp2 HG01243.hp2 |
a0004a0008 | a0004c0007a0008c0056 | a0004c0007t0014a0008c0056t0018 | a0004c0007t0014g0166 a0008c0056t0018g0061 |
2 | 83 | 0.0241 | -20 | c.648 others(39): Show |
SORCS2 | ENSG00000184985.17 | transcript | ENST00000507866.6 | protein_coding | 3/26 | INFO_REALIGN_3_PRIME | chr4 | TogoVar | ||||||
SORCS2_chr4_7187538_7747827 | 7544019 | TCCATCCA others(13): Show |
T | intron_variant | MODIFIER | HG03540.hp2 NA19030.hp1 |
a0001 | a0001c0009a0001c0053 | a0001c0009t0037a0001c0053t0001 | a0001c0009t0037g0042 a0001c0053t0001g0044 |
2 | 166 | 0.0120 | -20 | c.648 others(39): Show |
SORCS2 | ENSG00000184985.17 | transcript | ENST00000507866.6 | protein_coding | 3/26 | INFO_REALIGN_3_PRIME | chr4 | TogoVar | ||||||
SORCS2_chr4_7187538_7747827 | 7663254 | GTGAATAA others(13): Show |
G | intron_variant | MODIFIER | HG04115.hp2 | a0001 | a0001c0002 | a0001c0002t0011 | a0001c0002t0011g0112 | 1 | 168 | 0.0060 | -20 | c.953 others(37): Show |
SORCS2 | ENSG00000184985.17 | transcript | ENST00000507866.6 | protein_coding | 6/26 | INFO_REALIGN_3_PRIME | chr4 | TogoVar | ||||||
SORCS2_chr4_7187538_7747827 | 7693166 | ACCTCATC others(13): Show |
A | intron_variant | MODIFIER | HG00099.hp1 HG00099.hp2 HG00438.hp1 others(114): Show |
a0001a0002a0003others(12): Show | a0001c0001a0001c0002a0001c0003others(40): Show | a0001c0001t0002a0001c0001t0003a0001c0001t0004others(94): Show | a0001c0001t0002g0067 a0001c0001t0002g0089 a0001c0001t0003g0003 others(114): Show |
117 | 168 | 0.6964 | -20 | c.159 others(39): Show |
SORCS2 | ENSG00000184985.17 | transcript | ENST00000507866.6 | protein_coding | 11/26 | INFO_REALIGN_3_PRIME | chr4 | TogoVar | ||||||
SORCS2_chr4_7187538_7747827 | 7695476 | ATGGGTGA others(13): Show |
A | intron_variant | MODIFIER | HG02602.hp1 | a0002 | a0002c0004 | a0002c0004t0004 | a0002c0004t0004g0046 | 1 | 167 | 0.0060 | -20 | c.159 others(39): Show |
SORCS2 | ENSG00000184985.17 | transcript | ENST00000507866.6 | protein_coding | 11/26 | INFO_REALIGN_3_PRIME | chr4 | TogoVar | ||||||
SORCS2_chr4_7187538_7747827 | 7695740 | GTGGATGG others(13): Show |
G | intron_variant | MODIFIER | HG00099.hp1 HG00099.hp2 HG00438.hp1 others(105): Show |
a0001a0002a0003others(10): Show | a0001c0001a0001c0002a0001c0003others(33): Show | a0001c0001t0002a0001c0001t0003a0001c0001t0004others(87): Show | a0001c0001t0002g0067 a0001c0001t0002g0089 a0001c0001t0003g0003 others(105): Show |
108 | 135 | 0.8000 | -20 | c.159 others(39): Show |
SORCS2 | ENSG00000184985.17 | transcript | ENST00000507866.6 | protein_coding | 11/26 | INFO_REALIGN_3_PRIME | chr4 | TogoVar | ||||||
SORCS3_chr10_104636290_105270242 | 104640524 | TCACGCCC others(13): Show |
T | upstream_gene_variant | MODIFIER | HG03139.hp2 | a0001 | a0001c0001 | a0001c0001t0001 | a0001c0001t0001g0072 | 1 | 134 | 0.0075 | -20 | c.-80 others(29): Show |
SORCS3 | ENSG00000156395.14 | transcript | ENST00000369701.8 | protein_coding | 765 | chr10 | TogoVar | |||||||
SORCS3_chr10_104636290_105270242 | 104684779 | GTTTTTTT others(13): Show |
G | intron_variant | MODIFIER | HG01243.hp1 HG04204.hp1 |
a0001 | a0001c0001a0001c0002 | a0001c0001t0010a0001c0002t0001 | a0001c0001t0010g0127 a0001c0002t0001g0091 |
2 | 22 | 0.0909 | -20 | c.627 others(39): Show |
SORCS3 | ENSG00000156395.14 | transcript | ENST00000369701.8 | protein_coding | 1/26 | INFO_REALIGN_3_PRIME | chr10 | TogoVar | ||||||
SORCS3_chr10_104636290_105270242 | 104940224 | ATATATAT others(13): Show |
A | intron_variant | MODIFIER | HG03453.hp2 NA19003.hp1 NA19010.hp2 |
a0001 | a0001c0001a0001c0002 | a0001c0001t0002a0001c0001t0004a0001c0002t0003 | a0001c0001t0002g0065 a0001c0001t0004g0066 a0001c0002t0003g0070 |
3 | 128 | 0.0234 | -20 | c.795 others(39): Show |
SORCS3 | ENSG00000156395.14 | transcript | ENST00000369701.8 | protein_coding | 3/26 | INFO_REALIGN_3_PRIME | chr10 | TogoVar | ||||||
SORCS3_chr10_104636290_105270242 | 104940228 | ATATATAT others(13): Show |
A | intron_variant | MODIFIER | HG03130.hp1 | a0001 | a0001c0002 | a0001c0002t0001 | a0001c0002t0001g0050 | 1 | 121 | 0.0083 | -20 | c.795 others(39): Show |
SORCS3 | ENSG00000156395.14 | transcript | ENST00000369701.8 | protein_coding | 3/26 | INFO_REALIGN_3_PRIME | chr10 | TogoVar | ||||||
SORCS3_chr10_104636290_105270242 | 105091221 | CTCCTTCC others(13): Show |
C | intron_variant | MODIFIER | NA19079.hp1 NA19090.hp2 |
a0001 | a0001c0001 | a0001c0001t0002 | a0001c0001t0002g0093 a0001c0001t0002g0111 |
2 | 134 | 0.0149 | -20 | c.109 others(39): Show |
SORCS3 | ENSG00000156395.14 | transcript | ENST00000369701.8 | protein_coding | 6/26 | INFO_REALIGN_3_PRIME | chr10 | TogoVar | ||||||
SORD_chr15_45018195_45082185 | 45038126 | CCCTTCCT others(13): Show |
C | intron_variant | MODIFIER | HG01099.hp1 HG01123.hp2 HG02109.hp1 others(2): Show |
a0001a0002 | a0001c0001a0002c0002 | a0001c0001t0001a0002c0002t0002a0002c0002t0019others(1): Show | a0001c0001t0001g0265 a0001c0001t0001g0290 a0002c0002t0002g0010 others(2): Show |
5 | 62 | 0.0806 | -20 | c.67- others(35): Show |
SORD | ENSG00000140263.15 | transcript | ENST00000267814.14 | protein_coding | 1/8 | INFO_REALIGN_3_PRIME | chr15 | TogoVar | ||||||
SORT1_chr1_109304575_109402918 | 109326450 | TATATATA others(13): Show |
T | intron_variant | MODIFIER | NA18971.hp1 | a0001 | a0001c0001 | a0001c0001t0001 | a0001c0001t0001g0002 | 1 | 238 | 0.0042 | -20 | c.164 others(37): Show |
SORT1 | ENSG00000134243.12 | transcript | ENST00000256637.8 | protein_coding | 13/19 | chr1 | TogoVar | |||||||
SORT1_chr1_109304575_109402918 | 109331841 | GAATATAA others(13): Show |
G | intron_variant | MODIFIER | NA19006.hp2 | a0001 | a0001c0001 | a0001c0001t0001 | a0001c0001t0001g0049 | 1 | 238 | 0.0042 | -20 | c.137 others(39): Show |
SORT1 | ENSG00000134243.12 | transcript | ENST00000256637.8 | protein_coding | 11/19 | chr1 | TogoVar | |||||||
SORT1_chr1_109304575_109402918 | 109378699 | GATATATA others(13): Show |
G | intron_variant | MODIFIER | HG00639.hp1 HG00639.hp2 HG00741.hp1 others(3): Show |
a0001a0002 | a0001c0001a0001c0002a0002c0006 | a0001c0001t0001a0001c0001t0007a0001c0002t0003others(1): Show | a0001c0001t0001g0116 a0001c0001t0007g0134 a0001c0002t0003g0195 others(3): Show |
6 | 24 | 0.2500 | -20 | c.307 others(37): Show |
SORT1 | ENSG00000134243.12 | transcript | ENST00000256637.8 | protein_coding | 1/19 | chr1 | TogoVar | |||||||
SOS2_chr14_50112130_50236578 | 50160379 | CTTTTTTT others(13): Show |
C | intron_variant | MODIFIER | HG00099.hp2 HG00423.hp1 HG00609.hp1 others(106): Show |
a0001a0003a0005others(1): Show | a0001c0002a0001c0003a0003c0006others(2): Show | a0001c0002t0001a0001c0002t0004a0001c0002t0009others(6): Show | a0001c0002t0001g0008 a0001c0002t0001g0009 a0001c0002t0001g0010 others(106): Show |
109 | 125 | 0.8720 | -20 | c.119 others(37): Show |
SOS2 | ENSG00000100485.12 | transcript | ENST00000216373.10 | protein_coding | 9/22 | chr14 | TogoVar | |||||||
SOSTDC1_chr7_16456481_16470738 | 16470044 | TTATATAT others(13): Show |
T | upstream_gene_variant | MODIFIER | HG02886.hp1 NA18960.hp1 NA19056.hp2 |
a0001 | a0001c0001 | a0001c0001t0001a0001c0001t0002 | a0001c0001t0001g0004 a0001c0001t0002g0001 |
3 | 50 | 0.0600 | -20 | c.-43 others(31): Show |
SOSTDC1 | ENSG00000171243.8 | transcript | ENST00000307068.5 | protein_coding | 4307 | chr7 | TogoVar | |||||||
SOWAHB_chr4_76889152_76903144 | 76900847 | AAAAACAA others(13): Show |
A | upstream_gene_variant | MODIFIER | HG02717.hp1 HG02976.hp2 HG03098.hp1 |
a0003 | a0003c0003 | a0003c0003t0004 | a0003c0003t0004g0000 | 3 | 436 | 0.0069 | -20 | c.-30 others(31): Show |
SOWAHB | ENSG00000186212.4 | transcript | ENST00000334306.4 | protein_coding | 2704 | chr4 | TogoVar | |||||||
SOX5_chr12_23524504_23954670 | 23570922 | AAAAAAAA others(13): Show |
A | intron_variant | MODIFIER | HG02165.hp1 HG02165.hp2 |
a0001 | a0001c0001a0001c0002 | a0001c0001t0097a0001c0002t0006 | a0001c0001t0097g0062 a0001c0002t0006g0126 |
2 | 208 | 0.0096 | -20 | c.134 others(39): Show |
SOX5 | ENSG00000134532.20 | transcript | ENST00000451604.7 | protein_coding | 10/14 | chr12 | TogoVar | |||||||
SOX5_chr12_23524504_23954670 | 23570930 | AATATATA others(13): Show |
A | intron_variant | MODIFIER | NA19077.hp1 | a0001 | a0001c0001 | a0001c0001t0069 | a0001c0001t0069g0098 | 1 | 160 | 0.0063 | -20 | c.134 others(39): Show |
SOX5 | ENSG00000134532.20 | transcript | ENST00000451604.7 | protein_coding | 10/14 | chr12 | TogoVar | |||||||
SOX5_chr12_23524504_23954670 | 23726118 | CGAGAGAG others(13): Show |
C | intron_variant | MODIFIER | HG02258.hp2 HG02451.hp2 HG02559.hp1 others(5): Show |
a0001 | a0001c0001a0001c0002 | a0001c0001t0001a0001c0001t0014a0001c0001t0027others(2): Show | a0001c0001t0001g0084 a0001c0001t0001g0092 a0001c0001t0001g0108 others(5): Show |
8 | 22 | 0.3636 | -20 | c.810 others(37): Show |
SOX5 | ENSG00000134532.20 | transcript | ENST00000451604.7 | protein_coding | 6/14 | chr12 | TogoVar | |||||||
SOX5_chr12_23524504_23954670 | 23792622 | CAAAAAAA others(13): Show |
C | intron_variant | MODIFIER | HG03491.hp1 HG03492.hp1 |
a0001 | a0001c0001 | a0001c0001t0011a0001c0001t0037 | a0001c0001t0011g0082 a0001c0001t0037g0081 |
2 | 15 | 0.1333 | -20 | c.482 others(39): Show |
SOX5 | ENSG00000134532.20 | transcript | ENST00000451604.7 | protein_coding | 3/14 | chr12 | TogoVar | |||||||
SOX5_chr12_23524504_23954670 | 23804913 | TTTTATAT others(13): Show |
T | intron_variant | MODIFIER | NA20300.hp2 | a0001 | a0001c0001 | a0001c0001t0042 | a0001c0001t0042g0077 | 1 | 208 | 0.0048 | -20 | c.481 others(39): Show |
SOX5 | ENSG00000134532.20 | transcript | ENST00000451604.7 | protein_coding | 3/14 | chr12 | TogoVar | |||||||
SOX5_chr12_23524504_23954670 | 23804915 | TTATATAT others(13): Show |
T | intron_variant | MODIFIER | HG00639.hp1 HG00738.hp1 HG01258.hp1 others(11): Show |
a0001 | a0001c0001a0001c0002a0001c0006 | a0001c0001t0001a0001c0001t0002a0001c0001t0024others(10): Show | a0001c0001t0001g0084 a0001c0001t0001g0114 a0001c0001t0002g0085 others(11): Show |
14 | 22 | 0.6364 | -20 | c.481 others(39): Show |
SOX5 | ENSG00000134532.20 | transcript | ENST00000451604.7 | protein_coding | 3/14 | chr12 | TogoVar | |||||||
SOX6_chr11_15961449_16361546 | 16063496 | TTATATAT others(13): Show |
T | intron_variant | MODIFIER | HG01175.hp2 HG01243.hp1 NA18522.hp2 |
a0001 | a0001c0001a0001c0002 | a0001c0001t0003a0001c0002t0001a0001c0002t0039 | a0001c0001t0003g0026 a0001c0002t0001g0065 a0001c0002t0039g0019 |
3 | 31 | 0.0968 | -20 | c.110 others(39): Show |
SOX6 | ENSG00000110693.19 | transcript | ENST00000683767.1 | protein_coding | 9/15 | chr11 | TogoVar | |||||||
SOX6_chr11_15961449_16361546 | 16064521 | TATATATA others(13): Show |
T | intron_variant | MODIFIER | HG01243.hp1 HG02572.hp1 HG03486.hp1 |
a0001 | a0001c0001 | a0001c0001t0003a0001c0001t0017 | a0001c0001t0003g0026 a0001c0001t0003g0035 a0001c0001t0017g0033 |
3 | 216 | 0.0139 | -20 | c.110 others(39): Show |
SOX6 | ENSG00000110693.19 | transcript | ENST00000683767.1 | protein_coding | 9/15 | chr11 | TogoVar | |||||||
SOX6_chr11_15961449_16361546 | 16132262 | AGAAAGAA others(13): Show |
A | intron_variant | MODIFIER | HG00639.hp1 HG02818.hp1 |
a0001 | a0001c0001 | a0001c0001t0001a0001c0001t0046 | a0001c0001t0001g0023 a0001c0001t0046g0217 |
2 | 168 | 0.0119 | -20 | c.778 others(39): Show |
SOX6 | ENSG00000110693.19 | transcript | ENST00000683767.1 | protein_coding | 6/15 | chr11 | TogoVar |