view | regionname | pos | ref | alt | annotation | impact | samples | ahapids | chapids | thapids | thapids | ac | an | af | len | hgvs_c | hgvs_p | genename | geneid | featuretype | featureid | transcript_biotype | rank | cdna cdna pos length
|
cds cds pos length
|
aa aa pos length
|
distance | status | chr | external |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
SPPL2B_chr19_2323684_2360095 | 2326310 | TTTTGTGT others(13): Show |
T | upstream_gene_variant | MODIFIER | NA18989.hp1 NA19005.hp1 NA19010.hp2 |
a0001 | a0001c0001 | a0001c0001t0002 | a0001c0001t0002g0050 a0001c0001t0002g0277 |
3 | 375 | 0.0080 | -20 | c.-23 others(31): Show |
SPPL2B | ENSG00000005206.17 | transcript | ENST00000613503.5 | protein_coding | 2373 | chr19 | TogoVar | |||||||
SPPL2B_chr19_2323684_2360095 | 2326312 | TTGTGTGT others(13): Show |
T | upstream_gene_variant | MODIFIER | HG00099.hp1 HG00423.hp1 HG00438.hp1 others(71): Show |
a0001a0002a0011 | a0001c0001a0001c0003a0001c0004others(8): Show | a0001c0001t0016a0001c0003t0001a0001c0003t0023others(11): Show | a0001c0001t0016g0293 a0001c0001t0016g0294 a0001c0003t0001g0001 others(55): Show |
74 | 113 | 0.6549 | -20 | c.-23 others(31): Show |
SPPL2B | ENSG00000005206.17 | transcript | ENST00000613503.5 | protein_coding | 2371 | chr19 | TogoVar | |||||||
SPPL2B_chr19_2323684_2360095 | 2357420 | TCATCCAT others(13): Show |
T | downstream_gene_variant | MODIFIER | HG01109.hp2 HG01884.hp1 HG02055.hp2 others(17): Show |
a0001a0002 | a0001c0001a0002c0005 | a0001c0001t0001a0001c0001t0002a0002c0005t0001others(3): Show | a0001c0001t0001g0121 a0001c0001t0002g0268 a0002c0005t0001g0003 others(8): Show |
20 | 34 | 0.5882 | -20 | c.*42 others(31): Show |
SPPL2B | ENSG00000005206.17 | transcript | ENST00000613503.5 | protein_coding | 2326 | chr19 | TogoVar | |||||||
SPPL3_chr12_120757510_120909358 | 120766098 | GCGCACAC others(13): Show |
G | intron_variant | MODIFIER | HG00099.hp2 NA18971.hp2 |
a0001 | a0001c0001 | a0001c0001t0003a0001c0001t0032 | a0001c0001t0003g0306 a0001c0001t0032g0256 |
2 | 110 | 0.0182 | -20 | c.108 others(37): Show |
SPPL3 | ENSG00000157837.16 | transcript | ENST00000353487.7 | protein_coding | 10/10 | chr12 | TogoVar | |||||||
SPPL3_chr12_120757510_120909358 | 120766100 | GCACACAC others(13): Show |
G | intron_variant | MODIFIER | HG02896.hp2 HG03540.hp2 |
a0001 | a0001c0001 | a0001c0001t0019a0001c0001t0020 | a0001c0001t0019g0003 a0001c0001t0020g0002 |
2 | 187 | 0.0107 | -20 | c.108 others(37): Show |
SPPL3 | ENSG00000157837.16 | transcript | ENST00000353487.7 | protein_coding | 10/10 | chr12 | TogoVar | |||||||
SPPL3_chr12_120757510_120909358 | 120845858 | TTATCTAT others(13): Show |
T | intron_variant | MODIFIER | HG00423.hp1 | a0001 | a0001c0001 | a0001c0001t0002 | a0001c0001t0002g0255 | 1 | 99 | 0.0101 | -20 | c.24- others(37): Show |
SPPL3 | ENSG00000157837.16 | transcript | ENST00000353487.7 | protein_coding | 1/10 | chr12 | TogoVar | |||||||
SPPL3_chr12_120757510_120909358 | 120876808 | TACACACA others(13): Show |
T | intron_variant | MODIFIER | NA19001.hp2 | a0001 | a0001c0001 | a0001c0001t0028 | a0001c0001t0028g0063 | 1 | 28 | 0.0357 | -20 | c.23+ others(37): Show |
SPPL3 | ENSG00000157837.16 | transcript | ENST00000353487.7 | protein_coding | 1/10 | chr12 | TogoVar | |||||||
SPRED1_chr15_38247836_38362249 | 38251697 | AACACACA others(13): Show |
A | upstream_gene_variant | MODIFIER | HG02735.hp1 | a0001 | a0001c0001 | a0001c0001t0004 | a0001c0001t0004g0344 | 1 | 53 | 0.0189 | -20 | c.-14 others(31): Show |
SPRED1 | ENSG00000166068.13 | transcript | ENST00000299084.9 | protein_coding | 1138 | chr15 | TogoVar | |||||||
SPRED1_chr15_38247836_38362249 | 38273519 | TAATATAT others(13): Show |
T | intron_variant | MODIFIER | HG02257.hp1 HG02280.hp2 HG02572.hp2 others(5): Show |
a0001 | a0001c0001 | a0001c0001t0009a0001c0001t0010a0001c0001t0018 | a0001c0001t0009g0316 a0001c0001t0010g0086 a0001c0001t0010g0215 others(5): Show |
8 | 367 | 0.0218 | -20 | c.32+ others(37): Show |
SPRED1 | ENSG00000166068.13 | transcript | ENST00000299084.9 | protein_coding | 1/6 | chr15 | TogoVar | |||||||
SPRED1_chr15_38247836_38362249 | 38273520 | AATATATA others(13): Show |
A | intron_variant | MODIFIER | HG00140.hp1 HG00140.hp2 HG00280.hp2 others(130): Show |
a0001 | a0001c0001 | a0001c0001t0001a0001c0001t0005a0001c0001t0007others(9): Show | a0001c0001t0001g0007 a0001c0001t0001g0008 a0001c0001t0001g0009 others(126): Show |
133 | 157 | 0.8471 | -20 | c.32+ others(37): Show |
SPRED1 | ENSG00000166068.13 | transcript | ENST00000299084.9 | protein_coding | 1/6 | INFO_REALIGN_3_PRIME | chr15 | TogoVar | ||||||
SPRED2_chr2_65305851_65437599 | 65310458 | TACACACA others(13): Show |
T | downstream_gene_variant | MODIFIER | HG01167.hp2 HG02258.hp1 HG02886.hp2 |
a0001 | a0001c0001 | a0001c0001t0002a0001c0001t0021 | a0001c0001t0002g0085 a0001c0001t0002g0086 a0001c0001t0021g0266 |
3 | 84 | 0.0357 | -20 | c.*30 others(31): Show |
SPRED2 | ENSG00000198369.10 | transcript | ENST00000356388.9 | protein_coding | 392 | chr2 | TogoVar | |||||||
SPRED2_chr2_65305851_65437599 | 65360080 | AAAAAAAA others(13): Show |
A | intron_variant | MODIFIER | HG00438.hp2 | a0001 | a0001c0002 | a0001c0002t0017 | a0001c0002t0017g0095 | 1 | 274 | 0.0036 | -20 | c.27- others(37): Show |
SPRED2 | ENSG00000198369.10 | transcript | ENST00000356388.9 | protein_coding | 1/5 | chr2 | TogoVar | |||||||
SPRING1_chr12_116705171_116743069 | 116739268 | TGAAAGGT others(13): Show |
T | upstream_gene_variant | MODIFIER | HG02735.hp2 | a0001 | a0001c0001 | a0001c0001t0001 | a0001c0001t0001g0149 | 1 | 360 | 0.0028 | -20 | c.-13 others(31): Show |
SPRING1 | ENSG00000111412.6 | transcript | ENST00000261318.5 | protein_coding | 1200 | chr12 | TogoVar | |||||||
SPRR5_chr1_152942206_152954255 | 152944624 | TGTGTGTG others(13): Show |
T | upstream_gene_variant | MODIFIER | HG00408.hp2 HG00544.hp1 HG00597.hp2 others(122): Show |
a0001a0002a0003others(3): Show | a0001c0001a0002c0002a0003c0003others(3): Show | a0001c0001t0001a0001c0001t0003a0002c0002t0002others(5): Show | a0001c0001t0001g0001 a0001c0001t0001g0002 a0001c0001t0001g0003 others(12): Show |
125 | 434 | 0.2880 | -20 | c.-26 others(31): Show |
SPRR5 | ENSG00000283227.2 | transcript | ENST00000636302.2 | protein_coding | 2581 | chr1 | TogoVar | |||||||
SPRR5_chr1_152942206_152954255 | 152948602 | CCCCCCAC others(13): Show |
C | frameshift_variant | HIGH | HG03942.hp1 | a0001 | a0001c0010 | a0001c0010t0002 | a0001c0010t0002g0001 | 1 | 428 | 0.0023 | -20 | c.54_ others(25): Show |
p.Pro others(4): Show |
SPRR5 | ENSG00000283227.2 | transcript | ENST00000636302.2 | protein_coding | 2/2 | 115/762 | 54/327 | 18/108 | INFO_REALIGN_3_PRIME | chr1 | TogoVar | ||
SPRR5_chr1_152942206_152954255 | 152948623 | CCCCCCAC others(13): Show |
C | frameshift_variant | HIGH | HG01099.hp1 NA19067.hp2 |
a0008 | a0008c0009 | a0008c0009t0002 | a0008c0009t0002g0001 | 2 | 434 | 0.0046 | -20 | c.75_ others(25): Show |
p.Pro others(4): Show |
SPRR5 | ENSG00000283227.2 | transcript | ENST00000636302.2 | protein_coding | 2/2 | 136/762 | 75/327 | 25/108 | INFO_REALIGN_3_PRIME | chr1 | TogoVar | ||
SPRTN_chr1_231333293_231360023 | 231359053 | ATTATATA others(13): Show |
A | downstream_gene_variant | MODIFIER | HG02647.hp1 | a0002 | a0002c0002 | a0002c0002t0006 | a0002c0002t0006g0013 | 1 | 343 | 0.0029 | -20 | c.*56 others(31): Show |
SPRTN | ENSG00000010072.16 | transcript | ENST00000295050.12 | protein_coding | 4031 | chr1 | TogoVar | |||||||
SPRTN_chr1_231333293_231360023 | 231359054 | TTATATAT others(13): Show |
T | downstream_gene_variant | MODIFIER | HG00099.hp1 HG00323.hp1 HG00423.hp1 others(30): Show |
a0001a0002a0004 | a0001c0001a0002c0002a0004c0006 | a0001c0001t0002a0001c0001t0003a0002c0002t0001others(1): Show | a0001c0001t0002g0001 a0001c0001t0002g0003 a0001c0001t0002g0009 others(19): Show |
33 | 62 | 0.5323 | -20 | c.*56 others(31): Show |
SPRTN | ENSG00000010072.16 | transcript | ENST00000295050.12 | protein_coding | 4032 | chr1 | TogoVar | |||||||
SPRTN_chr1_231333293_231360023 | 231359091 | TATATATA others(13): Show |
T | downstream_gene_variant | MODIFIER | HG02622.hp2 HG03579.hp1 |
a0002 | a0002c0002 | a0002c0002t0004 | a0002c0002t0004g0018 a0002c0002t0004g0042 |
2 | 349 | 0.0057 | -20 | c.*57 others(31): Show |
SPRTN | ENSG00000010072.16 | transcript | ENST00000295050.12 | protein_coding | 4069 | chr1 | TogoVar | |||||||
SPRY3_chrX_155607586_155787459 | 155638293 | AATATATA others(13): Show |
A | intron_variant | MODIFIER | HG02896.hp1 | a0001 | a0001c0001 | a0001c0001t0041 | a0001c0001t0041g0050 | 1 | 9 | 0.1111 | -20 | c.-28 others(41): Show |
SPRY3 | ENSG00000168939.13 | transcript | ENST00000695325.1 | protein_coding | 1/2 | INFO_REALIGN_3_PRIME | chrX | TogoVar | ||||||
SPRY3_chrX_155607586_155787459 | 155751924 | GAAATAAA others(13): Show |
G | intron_variant | MODIFIER | HG00673.hp1 HG01074.hp1 HG01081.hp1 others(69): Show |
a0001a0002a0003 | a0001c0001a0001c0002a0002c0003others(1): Show | a0001c0001t0001a0001c0001t0002a0001c0001t0003others(53): Show | a0001c0001t0001g0026 a0001c0001t0001g0047 a0001c0001t0002g0195 others(68): Show |
72 | 99 | 0.7273 | -20 | c.-28 others(41): Show |
SPRY3 | ENSG00000168939.13 | transcript | ENST00000695325.1 | protein_coding | 1/2 | INFO_REALIGN_3_PRIME | chrX | TogoVar | ||||||
SPSB1_chr1_9287894_9374532 | 9295197 | TGTGTGTG others(13): Show |
T | intron_variant | MODIFIER | HG00280.hp1 HG00408.hp2 HG00733.hp2 others(19): Show |
a0001 | a0001c0001a0001c0002a0001c0003 | a0001c0001t0001a0001c0001t0003a0001c0001t0015others(6): Show | a0001c0001t0001g0010 a0001c0001t0001g0011 a0001c0001t0001g0018 others(18): Show |
22 | 368 | 0.0598 | -20 | c.-15 others(39): Show |
SPSB1 | ENSG00000171621.14 | transcript | ENST00000328089.11 | protein_coding | 1/2 | INFO_REALIGN_3_PRIME | chr1 | TogoVar | ||||||
SPSB1_chr1_9287894_9374532 | 9309291 | AGAGAGAG others(13): Show |
A | intron_variant | MODIFIER | HG01256.hp1 HG01258.hp2 HG02622.hp1 others(4): Show |
a0001 | a0001c0001a0001c0003 | a0001c0001t0001a0001c0001t0011a0001c0001t0035others(1): Show | a0001c0001t0001g0139 a0001c0001t0011g0199 a0001c0001t0035g0217 others(3): Show |
7 | 358 | 0.0196 | -20 | c.-15 others(41): Show |
SPSB1 | ENSG00000171621.14 | transcript | ENST00000328089.11 | protein_coding | 1/2 | INFO_REALIGN_3_PRIME | chr1 | TogoVar | ||||||
SPSB4_chr3_141046347_141153611 | 141071270 | GCAGGCGG others(13): Show |
G | intron_variant | MODIFIER | NA18941.hp1 NA18959.hp1 NA18972.hp2 others(2): Show |
a0001 | a0001c0001 | a0001c0001t0002a0001c0001t0006 | a0001c0001t0002g0059 a0001c0001t0002g0065 a0001c0001t0002g0066 others(2): Show |
5 | 252 | 0.0198 | -20 | c.694 others(37): Show |
SPSB4 | ENSG00000175093.5 | transcript | ENST00000310546.3 | protein_coding | 2/2 | chr3 | TogoVar | |||||||
SPSB4_chr3_141046347_141153611 | 141151357 | TGTGTGTG others(13): Show |
T | downstream_gene_variant | MODIFIER | HG00738.hp2 HG01243.hp2 HG02559.hp1 others(5): Show |
a0001 | a0001c0001a0001c0002 | a0001c0001t0006a0001c0001t0051a0001c0001t0056others(2): Show | a0001c0001t0006g0017 a0001c0001t0051g0233 a0001c0001t0056g0161 others(5): Show |
8 | 251 | 0.0319 | -20 | c.*40 others(31): Show |
SPSB4 | ENSG00000175093.5 | transcript | ENST00000310546.3 | protein_coding | 2747 | chr3 | TogoVar | |||||||
SPSB4_chr3_141046347_141153611 | 141151359 | TGTGTGTG others(13): Show |
T | downstream_gene_variant | MODIFIER | NA19012.hp2 | a0001 | a0001c0002 | a0001c0002t0021 | a0001c0002t0021g0089 | 1 | 241 | 0.0041 | -20 | c.*40 others(31): Show |
SPSB4 | ENSG00000175093.5 | transcript | ENST00000310546.3 | protein_coding | 2749 | chr3 | TogoVar | |||||||
SPTAN1_chr9_128547587_128638662 | 128562983 | CATGTATG others(13): Show |
C | intron_variant | MODIFIER | HG00735.hp2 HG01257.hp2 HG01258.hp2 others(29): Show |
a0001 | a0001c0001a0001c0003a0001c0012others(1): Show | a0001c0001t0001a0001c0001t0007a0001c0003t0001others(2): Show | a0001c0001t0001g0029 a0001c0001t0001g0044 a0001c0001t0001g0046 others(28): Show |
32 | 188 | 0.1702 | -20 | c.-3- others(35): Show |
SPTAN1 | ENSG00000197694.19 | transcript | ENST00000372739.7 | protein_coding | 1/56 | INFO_REALIGN_3_PRIME | chr9 | TogoVar | ||||||
SPTBN1_chr2_54451327_54676446 | 54466561 | CAAAAAAA others(13): Show |
C | intron_variant | MODIFIER | HG02717.hp1 | a0001 | a0001c0001 | a0001c0001t0002 | a0001c0001t0002g0249 | 1 | 251 | 0.0040 | -20 | c.-48 others(39): Show |
SPTBN1 | ENSG00000115306.17 | transcript | ENST00000356805.9 | protein_coding | 1/35 | INFO_REALIGN_3_PRIME | chr2 | TogoVar | ||||||
SPTBN1_chr2_54451327_54676446 | 54571556 | CACACACA others(13): Show |
C | intron_variant | MODIFIER | HG02055.hp2 HG02818.hp1 HG03540.hp2 |
a0001 | a0001c0001a0001c0005 | a0001c0001t0018a0001c0005t0031 | a0001c0001t0018g0189 a0001c0001t0018g0303 a0001c0005t0031g0182 |
3 | 368 | 0.0082 | -20 | c.149 others(39): Show |
SPTBN1 | ENSG00000115306.17 | transcript | ENST00000356805.9 | protein_coding | 2/35 | INFO_REALIGN_3_PRIME | chr2 | TogoVar | ||||||
SPTBN1_chr2_54451327_54676446 | 54640597 | GCTGGAAT others(13): Show |
G | intron_variant | MODIFIER | HG01361.hp2 | a0001 | a0001c0001 | a0001c0001t0005 | a0001c0001t0005g0340 | 1 | 368 | 0.0027 | -20 | c.385 others(39): Show |
SPTBN1 | ENSG00000115306.17 | transcript | ENST00000356805.9 | protein_coding | 18/35 | INFO_REALIGN_3_PRIME | chr2 | TogoVar | ||||||
SPTBN2_chr11_66677497_66734216 | 66728353 | GGCGGCGG others(13): Show |
G | intron_variant | MODIFIER | HG00735.hp2 | a0001 | a0001c0001 | a0001c0001t0034 | a0001c0001t0034g0037 | 1 | 326 | 0.0031 | -20 | c.-11 others(37): Show |
SPTBN2 | ENSG00000173898.15 | transcript | ENST00000533211.6 | protein_coding | 1/37 | chr11 | TogoVar | |||||||
SPTBN4_chr19_40462001_40581464 | 40515930 | CACACATA others(13): Show |
C | intron_variant | MODIFIER | HG00741.hp2 HG01074.hp2 HG01516.hp1 others(15): Show |
a0001a0002a0004others(3): Show | a0001c0001a0001c0017a0002c0004others(5): Show | a0001c0001t0001a0001c0017t0001a0002c0004t0001others(5): Show | a0001c0001t0001g0042 a0001c0001t0001g0053 a0001c0001t0001g0063 others(15): Show |
18 | 232 | 0.0776 | -20 | c.290 others(37): Show |
SPTBN4 | ENSG00000160460.17 | transcript | ENST00000598249.6 | protein_coding | 15/35 | INFO_REALIGN_3_PRIME | chr19 | TogoVar | ||||||
SPTBN4_chr19_40462001_40581464 | 40569955 | CACACACA others(13): Show |
C | intron_variant | MODIFIER | NA20300.hp2 | a0001 | a0001c0010 | a0001c0010t0008 | a0001c0010t0008g0080 | 1 | 232 | 0.0043 | -20 | c.702 others(37): Show |
SPTBN4 | ENSG00000160460.17 | transcript | ENST00000598249.6 | protein_coding | 32/35 | INFO_REALIGN_3_PRIME | chr19 | TogoVar | ||||||
SPTBN4_chr19_40462001_40581464 | 40569969 | CACACAGA others(13): Show |
C | intron_variant | MODIFIER | HG02486.hp1 | a0017 | a0017c0052 | a0017c0052t0001 | a0017c0052t0001g0125 | 1 | 231 | 0.0043 | -20 | c.702 others(37): Show |
SPTBN4 | ENSG00000160460.17 | transcript | ENST00000598249.6 | protein_coding | 32/35 | INFO_REALIGN_3_PRIME | chr19 | TogoVar | ||||||
SPTBN4_chr19_40462001_40581464 | 40577948 | TACACACA others(13): Show |
T | downstream_gene_variant | MODIFIER | HG03516.hp2 | a0008 | a0008c0013 | a0008c0013t0001 | a0008c0013t0001g0142 | 1 | 70 | 0.0143 | -20 | c.*23 others(31): Show |
SPTBN4 | ENSG00000160460.17 | transcript | ENST00000598249.6 | protein_coding | 1485 | chr19 | TogoVar | |||||||
SPTB_chr14_64741283_64884907 | 64759229 | AAGGCAGG others(13): Show |
A | intron_variant | MODIFIER | HG01106.hp2 HG01175.hp2 HG01261.hp2 others(33): Show |
a0001a0002a0003others(6): Show | a0001c0001a0002c0003a0002c0005others(14): Show | a0001c0001t0005a0002c0003t0005a0002c0003t0006others(23): Show | a0001c0001t0005g0261 a0002c0003t0005g0105 a0002c0003t0005g0110 others(33): Show |
36 | 266 | 0.1353 | -20 | c.634 others(39): Show |
SPTB | ENSG00000070182.21 | transcript | ENST00000644917.1 | protein_coding | 32/35 | chr14 | TogoVar | |||||||
SPTB_chr14_64741283_64884907 | 64768684 | ACCCCTCC others(13): Show |
A | intron_variant | MODIFIER | HG00438.hp1 HG00597.hp1 HG01074.hp1 others(12): Show |
a0001a0002a0003others(1): Show | a0001c0001a0002c0007a0003c0030others(2): Show | a0001c0001t0001a0001c0001t0006a0002c0007t0001others(6): Show | a0001c0001t0001g0065 a0001c0001t0006g0002 a0002c0007t0001g0085 others(12): Show |
15 | 266 | 0.0564 | -20 | c.602 others(37): Show |
SPTB | ENSG00000070182.21 | transcript | ENST00000644917.1 | protein_coding | 29/35 | chr14 | TogoVar | |||||||
SPTB_chr14_64741283_64884907 | 64884184 | AGCTACAC others(13): Show |
A | upstream_gene_variant | MODIFIER | HG02027.hp2 | a0004 | a0004c0008 | a0004c0008t0001 | a0004c0008t0001g0004 | 1 | 266 | 0.0038 | -20 | c.-44 others(31): Show |
SPTB | ENSG00000070182.21 | transcript | ENST00000644917.1 | protein_coding | 4278 | chr14 | TogoVar | |||||||
SPTLC2_chr14_77500997_77621637 | 77534164 | TTTCTCTC others(13): Show |
T | intron_variant | MODIFIER | HG02572.hp1 HG02615.hp1 HG03195.hp2 others(2): Show |
a0001 | a0001c0002 | a0001c0002t0005a0001c0002t0020 | a0001c0002t0005g0075 a0001c0002t0005g0076 a0001c0002t0005g0187 others(2): Show |
5 | 241 | 0.0207 | -20 | c.130 others(41): Show |
SPTLC2 | ENSG00000100596.8 | transcript | ENST00000216484.7 | protein_coding | 9/11 | chr14 | TogoVar | |||||||
SPTLC2_chr14_77500997_77621637 | 77564400 | TACACACA others(13): Show |
T | intron_variant | MODIFIER | HG00099.hp2 HG00280.hp1 HG00323.hp1 others(46): Show |
a0001 | a0001c0001a0001c0005a0001c0008 | a0001c0001t0001a0001c0001t0002a0001c0001t0009others(12): Show | a0001c0001t0001g0009 a0001c0001t0001g0018 a0001c0001t0001g0030 others(46): Show |
49 | 65 | 0.7538 | -20 | c.757 others(37): Show |
SPTLC2 | ENSG00000100596.8 | transcript | ENST00000216484.7 | protein_coding | 5/11 | chr14 | TogoVar | |||||||
SPTSSA_chr14_34427788_34467240 | 34462922 | ACACACAC others(13): Show |
A | upstream_gene_variant | MODIFIER | HG01346.hp2 | a0001 | a0001c0001 | a0001c0001t0002 | a0001c0001t0002g0082 | 1 | 342 | 0.0029 | -20 | c.-73 others(29): Show |
SPTSSA | ENSG00000165389.7 | transcript | ENST00000298130.5 | protein_coding | 683 | chr14 | TogoVar | |||||||
SPTSSB_chr3_161339798_161376517 | 161348251 | GCAAAACA others(13): Show |
G | intron_variant | MODIFIER | HG01074.hp2 HG01255.hp2 HG01975.hp1 others(2): Show |
a0001 | a0001c0001 | a0001c0001t0001a0001c0001t0004 | a0001c0001t0001g0049 a0001c0001t0001g0064 a0001c0001t0004g0198 others(1): Show |
5 | 145 | 0.0345 | -20 | c.-32 others(37): Show |
SPTSSB | ENSG00000196542.9 | transcript | ENST00000620149.2 | protein_coding | 2/2 | chr3 | TogoVar | |||||||
SPTY2D1_chr11_18601403_18639342 | 18611399 | CAATGGTG others(13): Show |
C | intron_variant | MODIFIER | HG01243.hp1 HG01891.hp1 HG02257.hp1 others(6): Show |
a0001 | a0001c0001 | a0001c0001t0001 | a0001c0001t0001g0002 a0001c0001t0001g0035 a0001c0001t0001g0287 |
9 | 442 | 0.0204 | -20 | c.196 others(35): Show |
SPTY2D1 | ENSG00000179119.15 | transcript | ENST00000336349.6 | protein_coding | 5/5 | chr11 | TogoVar | |||||||
SPTY2D1_chr11_18601403_18639342 | 18621323 | CAGAAAAG others(13): Show |
C | intron_variant | MODIFIER | HG00408.hp1 HG00558.hp2 HG02572.hp1 others(4): Show |
a0001a0002 | a0001c0001a0002c0003 | a0001c0001t0001a0001c0001t0011a0002c0003t0001 | a0001c0001t0001g0309 a0001c0001t0011g0250 a0002c0003t0001g0079 others(4): Show |
7 | 77 | 0.0909 | -20 | c.61- others(35): Show |
SPTY2D1 | ENSG00000179119.15 | transcript | ENST00000336349.6 | protein_coding | 1/5 | chr11 | TogoVar | |||||||
SQOR_chr15_45630029_45696281 | 45694004 | GTGTAATA others(13): Show |
G | downstream_gene_variant | MODIFIER | HG02257.hp1 HG03130.hp1 NA18906.hp2 |
a0001a0005 | a0001c0001a0005c0008 | a0001c0001t0001a0005c0008t0001 | a0001c0001t0001g0095 a0001c0001t0001g0149 a0005c0008t0001g0326 |
3 | 338 | 0.0089 | -20 | c.*29 others(31): Show |
SQOR | ENSG00000137767.14 | transcript | ENST00000260324.12 | protein_coding | 2724 | chr15 | TogoVar | |||||||
SRBD1_chr2_45383680_45616267 | 45415642 | AGGAGGGG others(13): Show |
A | intron_variant | MODIFIER | HG02976.hp2 | a0002 | a0002c0002 | a0002c0002t0001 | a0002c0002t0001g0230 | 1 | 279 | 0.0036 | -20 | c.233 others(39): Show |
SRBD1 | ENSG00000068784.13 | transcript | ENST00000263736.5 | protein_coding | 18/20 | chr2 | TogoVar | |||||||
SRBD1_chr2_45383680_45616267 | 45415738 | CGAGAGGA others(13): Show |
C | intron_variant | MODIFIER | HG02895.hp2 HG03225.hp2 |
a0002 | a0002c0002 | a0002c0002t0001 | a0002c0002t0001g0012 a0002c0002t0001g0016 |
2 | 287 | 0.0070 | -20 | c.233 others(39): Show |
SRBD1 | ENSG00000068784.13 | transcript | ENST00000263736.5 | protein_coding | 18/20 | chr2 | TogoVar | |||||||
SRBD1_chr2_45383680_45616267 | 45415748 | CGAGAGGA others(13): Show |
C | intron_variant | MODIFIER | HG01192.hp2 HG01346.hp2 HG02280.hp1 others(4): Show |
a0001a0007 | a0001c0001a0007c0015 | a0001c0001t0001a0007c0015t0001 | a0001c0001t0001g0237 a0001c0001t0001g0253 a0001c0001t0001g0259 others(4): Show |
7 | 189 | 0.0370 | -20 | c.233 others(39): Show |
SRBD1 | ENSG00000068784.13 | transcript | ENST00000263736.5 | protein_coding | 18/20 | chr2 | TogoVar | |||||||
SRBD1_chr2_45383680_45616267 | 45421506 | CAAACAAA others(13): Show |
C | intron_variant | MODIFIER | HG00733.hp2 | a0001 | a0001c0001 | a0001c0001t0001 | a0001c0001t0001g0266 | 1 | 163 | 0.0061 | -20 | c.205 others(39): Show |
SRBD1 | ENSG00000068784.13 | transcript | ENST00000263736.5 | protein_coding | 16/20 | chr2 | TogoVar | |||||||
SRBD1_chr2_45383680_45616267 | 45449885 | TGCTTCAT others(13): Show |
T | intron_variant | MODIFIER | NA18940.hp1 NA18944.hp2 NA18948.hp1 others(7): Show |
a0001a0002a0003 | a0001c0001a0002c0004a0003c0003 | a0001c0001t0001a0002c0004t0001a0003c0003t0001 | a0001c0001t0001g0064 a0002c0004t0001g0076 a0003c0003t0001g0060 others(7): Show |
10 | 356 | 0.0281 | -20 | c.204 others(41): Show |
SRBD1 | ENSG00000068784.13 | transcript | ENST00000263736.5 | protein_coding | 16/20 | chr2 | TogoVar |