Joint Open Genome and Omics Platform (JoGo)

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Snpeff annotation impact detail

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regionname	pos	ref	alt	annotation	impact	samples	ahapids	chapids	thapids	thapids	ac	an	af	len	hgvs_c	genename	geneid	featuretype	featureid	transcript_biotype	rank	distance	status	chr	external
TMPO_chr12_98510590_98555351	98520290	CTTCCTTC others(13): Show CTTCCTTCCTTCCTTCCTTCT	C C	intron_variant intron_variant	MODIFIER	HG04228.hp1 HG04228.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0003 a0001c0001t0003	a0001c0001t0003g0240 a0001c0001t0003g0240	1	374	0.0027	-20	c.279 others(37): Show c.279+4145_279+4164delTTCCTTCCTTCCTTCCTTCT	TMPO	ENSG00000120802.14	transcript	ENST00000556029.6	protein_coding	1/8			chr12	TogoVar
TMPPE_chr3_33085422_33102146	33087579	GCACACAC others(13): Show GCACACACACACACACACACA	G G	downstream_gene_variant downstream_gene_variant	MODIFIER	NA20129.hp2 NA20129.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0025 a0001c0001t0025	a0001c0001t0025g0040 a0001c0001t0025g0040	1	31	0.0323	-20	c.52 others(31): Show c.5235_*5254delTGTGTGTGTGTGTGTGTGTG	TMPPE	ENSG00000188167.9	transcript	ENST00000342462.5	protein_coding		2842		chr3	TogoVar
TMPRSS11A_chr4_67904395_67968493	67961477	CTTTTCCT others(13): Show CTTTTCCTTTTTTTTTTTTTT	C C	intron_variant intron_variant	MODIFIER	HG02965.hp2 HG02965.hp2	a0001 a0001	a0001c0003 a0001c0003	a0001c0003t0005 a0001c0003t0005	a0001c0003t0005g0184 a0001c0003t0005g0184	1	392	0.0026	-20	c.11+ others(35): Show c.11+1886_11+1905delAAAAAAAAAAAAAAGGAAAA	TMPRSS11A	ENSG00000187054.16	transcript	ENST00000508048.6	protein_coding	1/9			chr4	TogoVar
TMPRSS11A_chr4_67904395_67968493	67961482	CCTTTTTT others(13): Show CCTTTTTTTTTTTTTTTTTTT	C C	intron_variant intron_variant	MODIFIER	HG00280.hp1 HG00642.hp2 HG01358.hp1 others(22): Show HG00280.hp1 HG00642.hp2 HG01358.hp1 HG01516.hp1 HG02027.hp2 HG02109.hp2 HG02145.hp1 HG02615.hp1 HG02818.hp2 HG03017.hp2 HG03098.hp1 HG03195.hp2 HG03688.hp1 HG03831.hp2 HG03942.hp2 NA18940.hp1 NA18968.hp2 NA18983.hp1 NA18983.hp2 NA18998.hp1 NA18999.hp2 NA19005.hp2 NA19075.hp1 NA20752.hp1 NA20805.hp2	a0001 a0004 a0001 a0004	a0001c0001 a0001c0003 a0004c0007 a0001c0001 a0001c0003 a0004c0007	a0001c0001t0001 a0001c0001t0003 a0001c0001t0006 others(3): Show a0001c0001t0001 a0001c0001t0003 a0001c0001t0006 a0001c0003t0005 a0001c0003t0009 a0004c0007t0008	a0001c0001t0001g0189 a0001c0001t0001g0192 a0001c0001t0001g0194 others(18): Show a0001c0001t0001g0189 a0001c0001t0001g0192 a0001c0001t0001g0194 a0001c0001t0003g0032 a0001c0001t0003g0190 a0001c0001t0003g0191 a0001c0001t0003g0193 a0001c0001t0003g0197 a0001c0001t0003g0198 a0001c0001t0003g0199 a0001c0001t0003g0200 a0001c0001t0003g0201 a0001c0001t0003g0202 a0001c0001t0006g0119 a0001c0001t0006g0120 a0001c0003t0005g0033 a0001c0003t0005g0195 a0001c0003t0005g0196 a0001c0003t0005g0204 a0001c0003t0009g0013 a0004c0007t0008g0203	25	26	0.9615	-20	c.11+ others(35): Show c.11+1881_11+1900delAAAAAAAAAAAAAAAAAAAG	TMPRSS11A	ENSG00000187054.16	transcript	ENST00000508048.6	protein_coding	1/9			chr4	TogoVar
TMPRSS11D_chr4_67815876_67889002	67857310	TATATATA others(13): Show TATATATATATATACACACAC	T T	intron_variant intron_variant	MODIFIER	HG01243.hp2 HG02818.hp2 NA19030.hp2 HG01243.hp2 HG02818.hp2 NA19030.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0093 a0001c0001t0001g0094 a0001c0001t0001g0198 a0001c0001t0001g0093 a0001c0001t0001g0094 a0001c0001t0001g0198	3	337	0.0089	-20	c.130 others(37): Show c.130+2227_130+2246delGTGTGTGTATATATATATAT	TMPRSS11D	ENSG00000153802.12	transcript	ENST00000283916.11	protein_coding	2/9			chr4	TogoVar
TMPRSS11D_chr4_67815876_67889002	67857312	TATATATA others(13): Show TATATATATATACACACACAC	T T	intron_variant intron_variant	MODIFIER	HG03516.hp1 HG03516.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0002 a0001c0001t0002	a0001c0001t0002g0095 a0001c0001t0002g0095	1	336	0.0030	-20	c.130 others(37): Show c.130+2225_130+2244delGTGTGTGTGTATATATATAT	TMPRSS11D	ENSG00000153802.12	transcript	ENST00000283916.11	protein_coding	2/9			chr4	TogoVar
TMPRSS11F_chr4_68048198_68134869	68134686	TAAAAAAA others(13): Show TAAAAAAAAAAAAAAAAAAAA	T T	upstream_gene_variant upstream_gene_variant	MODIFIER	HG00323.hp1 HG00639.hp1 HG00642.hp1 others(17): Show HG00323.hp1 HG00639.hp1 HG00642.hp1 HG00741.hp1 HG01167.hp1 HG01169.hp1 HG01169.hp2 HG01175.hp2 HG01192.hp2 HG01257.hp1 HG01261.hp2 HG02155.hp2 HG02809.hp1 HG03225.hp2 HG03491.hp2 HG03704.hp2 NA18981.hp2 NA20300.hp1 NA20752.hp1 NA20905.hp2	a0001 a0002 a0001 a0002	a0001c0001 a0002c0002 a0001c0001 a0002c0002	a0001c0001t0002 a0002c0002t0003 a0002c0002t0005 a0001c0001t0002 a0002c0002t0003 a0002c0002t0005	a0001c0001t0002g0001 a0001c0001t0002g0006 a0001c0001t0002g0271 others(15): Show a0001c0001t0002g0001 a0001c0001t0002g0006 a0001c0001t0002g0271 a0001c0001t0002g0275 a0001c0001t0002g0282 a0001c0001t0002g0284 a0001c0001t0002g0285 a0001c0001t0002g0286 a0001c0001t0002g0287 a0001c0001t0002g0288 a0001c0001t0002g0315 a0001c0001t0002g0321 a0001c0001t0002g0329 a0002c0002t0003g0027 a0002c0002t0003g0073 a0002c0002t0003g0078 a0002c0002t0003g0084 a0002c0002t0005g0002	20	33	0.6061	-20	c.-48 others(31): Show c.-4886_-4867delTTTTTTTTTTTTTTTTTTTT	TMPRSS11F	ENSG00000198092.6	transcript	ENST00000356291.3	protein_coding		4818		chr4	TogoVar
TMPRSS12_chr12_50837926_50892884	50872909	CTATATAT others(13): Show CTATATATGTACATATATGAT	C C	intron_variant intron_variant	MODIFIER	HG04199.hp2 HG04199.hp2	a0002 a0002	a0002c0002 a0002c0002	a0002c0002t0002 a0002c0002t0002	a0002c0002t0002g0129 a0002c0002t0002g0129	1	254	0.0039	-20	c.653 others(39): Show c.653-12336_653-12317delTATATATGTACATATATGAT	TMPRSS12	ENSG00000186452.11	transcript	ENST00000398458.4	protein_coding	3/4			chr12	TogoVar
TMPRSS12_chr12_50837926_50892884	50881986	AAAAAAAA others(13): Show AAAAAAAAAAAAAATATATAT	A A	intron_variant intron_variant	MODIFIER	NA19056.hp2 NA19056.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0197 a0001c0001t0001g0197	1	384	0.0026	-20	c.653 others(37): Show c.653-3258_653-3239delAAAAAAAAAAAATATATATA	TMPRSS12	ENSG00000186452.11	transcript	ENST00000398458.4	protein_coding	3/4		INFO_REALIGN_3_PRIME	chr12	TogoVar
TMPRSS13_chr11_117895641_117934402	117904861	TTATATAT others(13): Show TTATATATATATATATATATA	T T	intron_variant intron_variant	MODIFIER	HG00408.hp2 HG01891.hp1 HG02109.hp1 others(14): Show HG00408.hp2 HG01891.hp1 HG02109.hp1 HG02615.hp2 HG02622.hp1 HG02698.hp1 HG02738.hp1 HG02896.hp1 HG03471.hp1 HG03669.hp2 NA18945.hp1 NA18952.hp2 NA18961.hp1 NA18973.hp2 NA18984.hp1 NA18994.hp1 NA18995.hp1	a0001 a0002 a0001 a0002	a0001c0001 a0001c0004 a0001c0009 others(3): Show a0001c0001 a0001c0004 a0001c0009 a0001c0017 a0001c0041 a0002c0019	a0001c0001t0022 a0001c0001t0051 a0001c0004t0017 others(8): Show a0001c0001t0022 a0001c0001t0051 a0001c0004t0017 a0001c0004t0054 a0001c0009t0014 a0001c0009t0017 a0001c0009t0066 a0001c0009t0069 a0001c0017t0022 a0001c0041t0014 a0002c0019t0017	a0001c0001t0022g0035 a0001c0001t0022g0354 a0001c0001t0051g0102 others(12): Show a0001c0001t0022g0035 a0001c0001t0022g0354 a0001c0001t0051g0102 a0001c0004t0017g0064 a0001c0004t0054g0113 a0001c0009t0014g0042 a0001c0009t0014g0263 a0001c0009t0014g0373 a0001c0009t0017g0058 a0001c0009t0017g0074 a0001c0009t0066g0266 a0001c0009t0069g0392 a0001c0017t0022g0364 a0001c0041t0014g0327 a0002c0019t0017g0162	17	104	0.1635	-20	c.138 others(37): Show c.1381+757_1382-761delTATATATATATATATATATA	TMPRSS13	ENSG00000137747.16	transcript	ENST00000524993.6	protein_coding	10/12			chr11	TogoVar
TMPRSS15_chr21_18264116_18408785	18317837	TCCATCCC others(13): Show TCCATCCCATCCCATCCCATC	T T	intron_variant intron_variant	MODIFIER	NA20129.hp1 NA20129.hp1	a0001 a0001	a0001c0007 a0001c0007	a0001c0007t0002 a0001c0007t0002	a0001c0007t0002g0059 a0001c0007t0002g0059	1	98	0.0102	-20	c.192 others(39): Show c.1922-2601_1922-2582delGATGGGATGGGATGGGATGG	TMPRSS15	ENSG00000154646.9	transcript	ENST00000284885.8	protein_coding	16/24			chr21	TogoVar
TMPRSS2_chr21_41459305_41513158	41474271	GTGAGTGA others(13): Show GTGAGTGAGGGGGTGAGGGCA	G G	intron_variant intron_variant	MODIFIER	NA19065.hp1 NA19065.hp1	a0010 a0010	a0010c0026 a0010c0026	a0010c0026t0003 a0010c0026t0003	a0010c0026t0003g0057 a0010c0026t0003g0057	1	380	0.0026	-20	c.728 others(35): Show c.728-795_728-776delTGCCCTCACCCCCTCACTCA	TMPRSS2	ENSG00000184012.14	transcript	ENST00000332149.10	protein_coding	8/13			chr21	TogoVar
TMPRSS2_chr21_41459305_41513158	41474291	ATGAGTGA others(13): Show ATGAGTGAGGAGGTGAGGGGG	A A	intron_variant intron_variant	MODIFIER	HG02486.hp1 HG02486.hp1	a0008 a0008	a0008c0017 a0008c0017	a0008c0017t0001 a0008c0017t0001	a0008c0017t0001g0252 a0008c0017t0001g0252	1	352	0.0028	-20	c.728 others(35): Show c.728-815_728-796delCCCCCTCACCTCCTCACTCA	TMPRSS2	ENSG00000184012.14	transcript	ENST00000332149.10	protein_coding	8/13			chr21	TogoVar
TMPRSS2_chr21_41459305_41513158	41474374	AGGGAGTG others(13): Show AGGGAGTGAGTGAGGGGGTGG	A A	intron_variant intron_variant	MODIFIER	HG00642.hp2 HG01109.hp2 HG01175.hp1 others(16): Show HG00642.hp2 HG01109.hp2 HG01175.hp1 HG02630.hp1 HG02895.hp2 HG02897.hp1 HG03017.hp2 HG03195.hp1 NA18944.hp2 NA18953.hp2 NA18974.hp2 NA18983.hp2 NA18998.hp2 NA19000.hp1 NA19007.hp1 NA19079.hp2 NA19088.hp1 NA19240.hp1 NA20805.hp1	a0001 a0002 a0001 a0002	a0001c0001 a0001c0002 a0001c0004 others(3): Show a0001c0001 a0001c0002 a0001c0004 a0001c0008 a0002c0013 a0002c0019	a0001c0001t0001 a0001c0002t0001 a0001c0002t0005 others(5): Show a0001c0001t0001 a0001c0002t0001 a0001c0002t0005 a0001c0002t0008 a0001c0004t0001 a0001c0008t0001 a0002c0013t0005 a0002c0019t0005	a0001c0001t0001g0001 a0001c0001t0001g0055 a0001c0001t0001g0078 others(14): Show a0001c0001t0001g0001 a0001c0001t0001g0055 a0001c0001t0001g0078 a0001c0001t0001g0093 a0001c0001t0001g0146 a0001c0001t0001g0269 a0001c0001t0001g0336 a0001c0002t0001g0208 a0001c0002t0005g0214 a0001c0002t0005g0216 a0001c0002t0005g0219 a0001c0002t0008g0298 a0001c0004t0001g0348 a0001c0008t0001g0144 a0002c0013t0005g0349 a0002c0013t0005g0350 a0002c0019t0005g0341	19	366	0.0519	-20	c.728 others(35): Show c.728-898_728-879delCCACCCCCTCACTCACTCCC	TMPRSS2	ENSG00000184012.14	transcript	ENST00000332149.10	protein_coding	8/13			chr21	TogoVar
TMPRSS2_chr21_41459305_41513158	41474454	AGGGAGTG others(13): Show AGGGAGTGAGTGAGGGGGTGG	A A	intron_variant intron_variant	MODIFIER	HG01192.hp2 NA19054.hp1 HG01192.hp2 NA19054.hp1	a0001 a0002 a0001 a0002	a0001c0002 a0002c0006 a0001c0002 a0002c0006	a0001c0002t0001 a0002c0006t0011 a0001c0002t0001 a0002c0006t0011	a0001c0002t0001g0327 a0002c0006t0011g0027 a0001c0002t0001g0327 a0002c0006t0011g0027	2	359	0.0056	-20	c.728 others(35): Show c.728-978_728-959delCCACCCCCTCACTCACTCCC	TMPRSS2	ENSG00000184012.14	transcript	ENST00000332149.10	protein_coding	8/13			chr21	TogoVar
TMPRSS2_chr21_41459305_41513158	41474704	GTGAGGGG others(13): Show GTGAGGGGGTGAGTGAGGAGA	G G	intron_variant intron_variant	MODIFIER	HG02486.hp1 HG03139.hp2 HG02486.hp1 HG03139.hp2	a0002 a0008 a0002 a0008	a0002c0003 a0008c0017 a0002c0003 a0008c0017	a0002c0003t0001 a0008c0017t0001 a0002c0003t0001 a0008c0017t0001	a0002c0003t0001g0253 a0008c0017t0001g0252 a0002c0003t0001g0253 a0008c0017t0001g0252	2	360	0.0056	-20	c.728 others(37): Show c.728-1228_728-1209delTCTCCTCACTCACCCCCTCA	TMPRSS2	ENSG00000184012.14	transcript	ENST00000332149.10	protein_coding	8/13			chr21	TogoVar
TMPRSS2_chr21_41459305_41513158	41475003	AGGGGGGT others(13): Show AGGGGGGTGAGGGGTAAGGAG	A A	intron_variant intron_variant	MODIFIER	NA19043.hp2 NA19043.hp2	a0001 a0001	a0001c0002 a0001c0002	a0001c0002t0005 a0001c0002t0005	a0001c0002t0005g0065 a0001c0002t0005g0065	1	345	0.0029	-20	c.728 others(37): Show c.728-1527_728-1508delCTCCTTACCCCTCACCCCCC	TMPRSS2	ENSG00000184012.14	transcript	ENST00000332149.10	protein_coding	8/13			chr21	TogoVar
TMPRSS2_chr21_41459305_41513158	41475431	AAGGGGTG others(13): Show AAGGGGTGAGTGAGGGGGTGC	A A	intron_variant intron_variant	MODIFIER	HG01069.hp2 HG01070.hp1 HG01123.hp1 others(24): Show HG01069.hp2 HG01070.hp1 HG01123.hp1 HG01168.hp1 HG01256.hp2 HG01358.hp2 HG01433.hp2 HG01891.hp1 HG01934.hp2 HG02129.hp2 HG02273.hp1 HG02683.hp2 HG03654.hp2 HG03831.hp1 HG04115.hp1 HG04184.hp1 NA18906.hp2 NA18952.hp1 NA18953.hp2 NA18961.hp2 NA18970.hp2 NA18974.hp2 NA18983.hp2 NA18995.hp2 NA19007.hp2 NA19060.hp1 NA19082.hp1	a0001 a0001	a0001c0001 a0001c0002 a0001c0001 a0001c0002	a0001c0001t0001 a0001c0001t0016 a0001c0002t0001 others(2): Show a0001c0001t0001 a0001c0001t0016 a0001c0002t0001 a0001c0002t0006 a0001c0002t0008	a0001c0001t0001g0001 a0001c0001t0001g0024 a0001c0001t0001g0025 others(22): Show a0001c0001t0001g0001 a0001c0001t0001g0024 a0001c0001t0001g0025 a0001c0001t0001g0111 a0001c0001t0001g0129 a0001c0001t0001g0140 a0001c0001t0001g0143 a0001c0001t0001g0180 a0001c0001t0001g0182 a0001c0001t0001g0238 a0001c0001t0001g0292 a0001c0001t0001g0300 a0001c0001t0001g0347 a0001c0001t0001g0353 a0001c0001t0001g0366 a0001c0001t0016g0312 a0001c0002t0001g0006 a0001c0002t0001g0007 a0001c0002t0001g0189 a0001c0002t0006g0372 a0001c0002t0008g0270 a0001c0002t0008g0297 a0001c0002t0008g0302 a0001c0002t0008g0303 a0001c0002t0008g0315	27	379	0.0712	-20	c.727 others(37): Show c.727+1126_727+1145delGCACCCCCTCACTCACCCCT	TMPRSS2	ENSG00000184012.14	transcript	ENST00000332149.10	protein_coding	8/13			chr21	TogoVar
TMPRSS3_chr21_42366890_42401052	42399354	TAAAAAAA others(13): Show TAAAAAAAAAAAAAAAAAAAA	T T	upstream_gene_variant upstream_gene_variant	MODIFIER	HG02040.hp2 HG02280.hp1 HG02622.hp2 others(1): Show HG02040.hp2 HG02280.hp1 HG02622.hp2 HG02630.hp1	a0001 a0002 a0003 others(1): Show a0001 a0002 a0003 a0005	a0001c0002 a0002c0003 a0003c0005 others(1): Show a0001c0002 a0002c0003 a0003c0005 a0005c0008	a0001c0002t0002 a0002c0003t0001 a0003c0005t0002 others(1): Show a0001c0002t0002 a0002c0003t0001 a0003c0005t0002 a0005c0008t0002	a0001c0002t0002g0015 a0002c0003t0001g0158 a0003c0005t0002g0328 others(1): Show a0001c0002t0002g0015 a0002c0003t0001g0158 a0003c0005t0002g0328 a0005c0008t0002g0229	4	28	0.1429	-20	c.-34 others(31): Show c.-3484_-3465delTTTTTTTTTTTTTTTTTTTT	TMPRSS3	ENSG00000160183.17	transcript	ENST00000644384.2	protein_coding		3303		chr21	TogoVar
TMPRSS4_chr11_118072078_118126890	118096818	AGAAAGAG others(13): Show AGAAAGAGAGAAAGAAAGAAG	A A	intron_variant intron_variant	MODIFIER	HG00423.hp2 HG00544.hp1 HG00597.hp1 others(29): Show HG00423.hp2 HG00544.hp1 HG00597.hp1 HG00597.hp2 HG01074.hp2 HG01928.hp2 HG02004.hp2 HG02040.hp1 HG02071.hp2 HG02145.hp2 HG02615.hp1 HG02717.hp2 HG02886.hp1 HG02886.hp2 HG03041.hp1 HG03209.hp1 HG03239.hp2 HG03453.hp1 HG03491.hp1 HG03492.hp1 HG03669.hp1 HG03927.hp2 HG04199.hp1 HG04228.hp1 NA18968.hp2 NA18980.hp1 NA18990.hp1 NA19065.hp1 NA19066.hp1 NA19067.hp1 NA19079.hp2 NA19086.hp1	a0001 a0003 a0005 a0001 a0003 a0005	a0001c0001 a0001c0002 a0001c0012 others(2): Show a0001c0001 a0001c0002 a0001c0012 a0003c0007 a0005c0006	a0001c0001t0001 a0001c0001t0003 a0001c0001t0011 others(8): Show a0001c0001t0001 a0001c0001t0003 a0001c0001t0011 a0001c0002t0002 a0001c0002t0006 a0001c0002t0009 a0001c0002t0017 a0001c0002t0039 a0001c0012t0002 a0003c0007t0001 a0005c0006t0005	a0001c0001t0001g0165 a0001c0001t0001g0177 a0001c0001t0003g0140 others(27): Show a0001c0001t0001g0165 a0001c0001t0001g0177 a0001c0001t0003g0140 a0001c0001t0003g0242 a0001c0001t0003g0243 a0001c0001t0003g0295 a0001c0001t0003g0313 a0001c0001t0003g0314 a0001c0001t0003g0337 a0001c0001t0011g0017 a0001c0002t0002g0058 a0001c0002t0002g0087 a0001c0002t0002g0118 a0001c0002t0002g0119 a0001c0002t0002g0120 a0001c0002t0002g0122 a0001c0002t0002g0130 a0001c0002t0002g0135 a0001c0002t0002g0198 a0001c0002t0002g0342 a0001c0002t0002g0362 a0001c0002t0006g0009 a0001c0002t0009g0309 a0001c0002t0017g0151 a0001c0002t0039g0136 a0001c0012t0002g0113 a0001c0012t0002g0123 a0003c0007t0001g0098 a0005c0006t0005g0055 a0005c0006t0005g0121	32	402	0.0796	-20	c.43+ others(35): Show c.43+1970_43+1989delGAGAAAGAAAGAAGGAAAGA	TMPRSS4	ENSG00000137648.19	transcript	ENST00000437212.8	protein_coding	2/12		INFO_REALIGN_3_PRIME	chr11	TogoVar
TMPRSS4_chr11_118072078_118126890	118096846	GGAAAGAA others(13): Show GGAAAGAAAGAAAGAAAGAAA	G G	intron_variant intron_variant	MODIFIER	HG06807.hp1 HG06807.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0003 a0001c0001t0003	a0001c0001t0003g0082 a0001c0001t0003g0082	1	68	0.0147	-20	c.43+ others(35): Show c.43+2037_43+2056delAAAGAAAGAAAGAAAGAAAG	TMPRSS4	ENSG00000137648.19	transcript	ENST00000437212.8	protein_coding	2/12		INFO_REALIGN_3_PRIME	chr11	TogoVar
TMPRSS4_chr11_118072078_118126890	118096967	GGAAAGAA others(13): Show GGAAAGAAAGAAAGAAAGAAA	G G	intron_variant intron_variant	MODIFIER	HG02451.hp2 HG03516.hp2 NA18974.hp2 others(2): Show HG02451.hp2 HG03516.hp2 NA18974.hp2 NA18980.hp2 NA19056.hp2	a0002 a0004 a0010 a0002 a0004 a0010	a0002c0003 a0004c0005 a0010c0016 a0002c0003 a0004c0005 a0010c0016	a0002c0003t0005 a0004c0005t0010 a0010c0016t0001 a0002c0003t0005 a0004c0005t0010 a0010c0016t0001	a0002c0003t0005g0023 a0004c0005t0010g0247 a0004c0005t0010g0279 others(1): Show a0002c0003t0005g0023 a0004c0005t0010g0247 a0004c0005t0010g0279 a0010c0016t0001g0338	5	165	0.0303	-20	c.44- others(35): Show c.44-1969_44-1950delGAAAGAAAGAAAGAAAGAAA	TMPRSS4	ENSG00000137648.19	transcript	ENST00000437212.8	protein_coding	2/12		INFO_REALIGN_3_PRIME	chr11	TogoVar
TMPRSS5_chr11_113682550_113711308	113699203	GTCTGTCT others(13): Show GTCTGTCTGTCTCTCTCTCTC	G G	intron_variant intron_variant	MODIFIER	HG02135.hp2 NA18947.hp2 HG02135.hp2 NA18947.hp2	a0001 a0001	a0001c0002 a0001c0002	a0001c0002t0001 a0001c0002t0001	a0001c0002t0001g0006 a0001c0002t0001g0116 a0001c0002t0001g0006 a0001c0002t0001g0116	2	328	0.0061	-20	c.206 others(35): Show c.206-196_206-177delGAGAGAGAGAGACAGACAGA	TMPRSS5	ENSG00000166682.13	transcript	ENST00000299882.11	protein_coding	3/12			chr11	TogoVar
TMPRSS5_chr11_113682550_113711308	113699207	GTCTGTCT others(13): Show GTCTGTCTCTCTCTCTCTCTC	G G	intron_variant intron_variant	MODIFIER	HG02717.hp1 HG02717.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0002 a0001c0001t0002	a0001c0001t0002g0129 a0001c0001t0002g0129	1	415	0.0024	-20	c.206 others(35): Show c.206-200_206-181delGAGAGAGAGAGAGAGACAGA	TMPRSS5	ENSG00000166682.13	transcript	ENST00000299882.11	protein_coding	3/12			chr11	TogoVar
TMPRSS6_chr22_37060436_37114713	37078947	AGGAGAAA others(13): Show AGGAGAAAAAGAGAAAGAAAG	A A	intron_variant intron_variant	MODIFIER	HG00639.hp2 HG01175.hp1 NA20752.hp1 HG00639.hp2 HG01175.hp1 NA20752.hp1	a0001 a0003 a0001 a0003	a0001c0005 a0003c0018 a0003c0057 a0001c0005 a0003c0018 a0003c0057	a0001c0005t0002 a0003c0018t0001 a0003c0057t0001 a0001c0005t0002 a0003c0018t0001 a0003c0057t0001	a0001c0005t0002g0329 a0003c0018t0001g0200 a0003c0057t0001g0119 a0001c0005t0002g0329 a0003c0018t0001g0200 a0003c0057t0001g0119	3	306	0.0098	-20	c.119 others(39): Show c.1197-3687_1197-3668delCTTTCTTTCTCTTTTTCTCC	TMPRSS6	ENSG00000187045.19	transcript	ENST00000676104.1	protein_coding	10/17			chr22	TogoVar
TMPRSS9_chr19_2355265_2431261	2357420	TCATCCAT others(13): Show TCATCCATCCATCCATCCATC	T T	upstream_gene_variant upstream_gene_variant	MODIFIER	HG02809.hp1 HG03209.hp1 HG03486.hp2 others(1): Show HG02809.hp1 HG03209.hp1 HG03486.hp2 HG03540.hp2	a0002 a0007 a0020 a0002 a0007 a0020	a0002c0005 a0007c0024 a0020c0029 a0002c0005 a0007c0024 a0020c0029	a0002c0005t0002 a0007c0024t0002 a0020c0029t0003 a0002c0005t0002 a0007c0024t0002 a0020c0029t0003	a0002c0005t0002g0112 a0002c0005t0002g0113 a0007c0024t0002g0114 others(1): Show a0002c0005t0002g0112 a0002c0005t0002g0113 a0007c0024t0002g0114 a0020c0029t0003g0008	4	6	0.6667	-20	c.-29 others(31): Show c.-2965_-2946delCATCCATCCATCCATCCATC	TMPRSS9	ENSG00000178297.15	transcript	ENST00000696167.1	protein_coding		2844		chr19	TogoVar
TMPRSS9_chr19_2355265_2431261	2362543	GATGGCTT others(13): Show GATGGCTTTGTGTGGTTGTGT	G G	intron_variant intron_variant	MODIFIER	HG02622.hp1 HG02622.hp1	a0002 a0002	a0002c0005 a0002c0005	a0002c0005t0002 a0002c0005t0002	a0002c0005t0002g0002 a0002c0005t0002g0002	1	112	0.0089	-20	c.-26 others(37): Show c.-26+2188_-26+2207delCTTTGTGTGGTTGTGTATGG	TMPRSS9	ENSG00000178297.15	transcript	ENST00000696167.1	protein_coding	1/18		INFO_REALIGN_3_PRIME	chr19	TogoVar
TMPRSS9_chr19_2355265_2431261	2374248	CTTTTTTT others(13): Show CTTTTTTTTTTTTTTTTTTTT	C C	intron_variant intron_variant	MODIFIER	HG01934.hp1 NA19066.hp2 HG01934.hp1 NA19066.hp2	a0002 a0022 a0002 a0022	a0002c0002 a0022c0023 a0002c0002 a0022c0023	a0002c0002t0001 a0022c0023t0002 a0002c0002t0001 a0022c0023t0002	a0002c0002t0001g0101 a0022c0023t0002g0013 a0002c0002t0001g0101 a0022c0023t0002g0013	2	22	0.0909	-20	c.-26 others(39): Show c.-26+13906_-26+13925delTTTTTTTTTTTTTTTTTTTT	TMPRSS9	ENSG00000178297.15	transcript	ENST00000696167.1	protein_coding	1/18		INFO_REALIGN_3_PRIME	chr19	TogoVar
TMPRSS9_chr19_2355265_2431261	2377243	CTGTATGT others(13): Show CTGTATGTATGTATGTATGTA	C C	intron_variant intron_variant	MODIFIER	HG02630.hp2 HG02647.hp2 HG02809.hp2 others(6): Show HG02630.hp2 HG02647.hp2 HG02809.hp2 HG03041.hp1 HG03041.hp2 HG03453.hp1 HG03453.hp2 HG03486.hp1 HG03540.hp2	a0001 a0012 a0014 others(4): Show a0001 a0012 a0014 a0015 a0016 a0019 a0020	a0001c0001 a0001c0027 a0012c0018 others(5): Show a0001c0001 a0001c0027 a0012c0018 a0014c0031 a0015c0016 a0016c0026 a0019c0030 a0020c0029	a0001c0001t0001 a0001c0027t0002 a0012c0018t0002 others(5): Show a0001c0001t0001 a0001c0027t0002 a0012c0018t0002 a0014c0031t0003 a0015c0016t0001 a0016c0026t0002 a0019c0030t0003 a0020c0029t0003	a0001c0001t0001g0079 a0001c0001t0001g0107 a0001c0027t0002g0066 others(6): Show a0001c0001t0001g0079 a0001c0001t0001g0107 a0001c0027t0002g0066 a0012c0018t0002g0001 a0014c0031t0003g0108 a0015c0016t0001g0109 a0016c0026t0002g0102 a0019c0030t0003g0105 a0020c0029t0003g0008	9	36	0.2500	-20	c.-25 others(39): Show c.-25-12488_-25-12469delGTATGTATGTATGTATGTAT	TMPRSS9	ENSG00000178297.15	transcript	ENST00000696167.1	protein_coding	1/18		INFO_REALIGN_3_PRIME	chr19	TogoVar
TMSB4Y_chrY_13698899_13711024	13703456	CAAAAAAA others(13): Show CAAAAAAAAAAAAAAAAAAAA	C C	upstream_gene_variant upstream_gene_variant	MODIFIER	HG02602.hp1 HG02738.hp1 HG02602.hp1 HG02738.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0001 a0001c0001t0001g0001	2	3	0.6667	-20	c.-87 others(29): Show c.-879_-860delAAAAAAAAAAAAAAAAAAAA	TMSB4Y	ENSG00000154620.6	transcript	ENST00000284856.4	protein_coding		442		chrY	TogoVar
TMTC1_chr12_29495840_29788942	29675589	TACACACA others(13): Show TACACACACACACACACACAC	T T	intron_variant intron_variant	MODIFIER	HG00140.hp2 HG00323.hp1 HG00558.hp1 others(69): Show HG00140.hp2 HG00323.hp1 HG00558.hp1 HG00597.hp2 HG01081.hp2 HG01123.hp1 HG01167.hp1 HG01169.hp1 HG01192.hp2 HG01256.hp2 HG01257.hp1 HG01258.hp1 HG01258.hp2 HG01884.hp2 HG01891.hp1 HG01934.hp1 HG02055.hp2 HG02056.hp1 HG02074.hp2 HG02080.hp1 HG02083.hp2 HG02145.hp2 HG02257.hp1 HG02258.hp1 HG02451.hp2 HG02523.hp1 HG02572.hp2 HG02602.hp1 HG02602.hp2 HG02647.hp2 HG02717.hp1 HG02809.hp1 HG02818.hp1 HG02818.hp2 HG02886.hp1 HG02922.hp2 HG02965.hp1 HG02965.hp2 HG03098.hp1 HG03130.hp2 HG03139.hp2 HG03209.hp1 HG03239.hp2 HG03486.hp1 HG03486.hp2 HG03492.hp2 HG03516.hp1 HG03669.hp1 HG03710.hp1 HG03834.hp1 HG04184.hp1 HG04228.hp1 HG04228.hp2 NA18522.hp1 NA18940.hp1 NA18953.hp2 NA18966.hp2 NA18999.hp2 NA19002.hp2 NA19012.hp1 NA19062.hp1 NA19063.hp1 NA19074.hp2 NA19076.hp2 NA19077.hp2 NA19084.hp2 NA19240.hp1 NA20129.hp2 NA20300.hp1 NA20752.hp1 NA20805.hp1 NA20905.hp1	a0001 a0002 a0003 others(1): Show a0001 a0002 a0003 a0004	a0001c0001 a0001c0002 a0001c0005 others(12): Show a0001c0001 a0001c0002 a0001c0005 a0001c0006 a0001c0007 a0001c0008 a0001c0015 a0001c0017 a0002c0003 a0002c0004 a0002c0009 a0002c0011 a0002c0029 a0003c0023 a0004c0016	a0001c0001t0001 a0001c0001t0002 a0001c0001t0003 others(56): Show a0001c0001t0001 a0001c0001t0002 a0001c0001t0003 a0001c0001t0004 a0001c0001t0005 a0001c0001t0009 a0001c0001t0011 a0001c0001t0027 a0001c0001t0029 a0001c0001t0031 a0001c0001t0035 a0001c0001t0050 a0001c0001t0066 a0001c0001t0078 a0001c0002t0002 a0001c0002t0003 a0001c0002t0004 a0001c0002t0005 a0001c0002t0011 a0001c0002t0013 a0001c0002t0019 a0001c0002t0034 a0001c0002t0049 a0001c0002t0051 a0001c0002t0060 a0001c0005t0002 a0001c0005t0003 a0001c0006t0001 a0001c0006t0003 a0001c0006t0018 a0001c0006t0024 a0001c0006t0075 a0001c0007t0006 a0001c0007t0025 a0001c0007t0035 a0001c0007t0058 a0001c0008t0032 a0001c0015t0019 a0001c0017t0009 a0002c0003t0017 a0002c0003t0022 a0002c0003t0038 a0002c0003t0085 a0002c0003t0087 a0002c0003t0097 a0002c0004t0008 a0002c0004t0012 a0002c0004t0017 a0002c0004t0040 a0002c0004t0081 a0002c0004t0084 a0002c0009t0023 a0002c0009t0028 a0002c0009t0040 a0002c0011t0006 a0002c0011t0025 a0002c0029t0089 a0003c0023t0005 a0004c0016t0002	a0001c0001t0001g0147 a0001c0001t0002g0149 a0001c0001t0003g0134 others(69): Show a0001c0001t0001g0147 a0001c0001t0002g0149 a0001c0001t0003g0134 a0001c0001t0004g0206 a0001c0001t0005g0069 a0001c0001t0009g0159 a0001c0001t0009g0160 a0001c0001t0011g0098 a0001c0001t0027g0101 a0001c0001t0029g0047 a0001c0001t0029g0048 a0001c0001t0031g0065 a0001c0001t0031g0066 a0001c0001t0035g0082 a0001c0001t0050g0143 a0001c0001t0066g0064 a0001c0001t0078g0199 a0001c0002t0002g0170 a0001c0002t0003g0040 a0001c0002t0003g0084 a0001c0002t0003g0094 a0001c0002t0003g0119 a0001c0002t0004g0138 a0001c0002t0005g0135 a0001c0002t0011g0127 a0001c0002t0011g0200 a0001c0002t0013g0115 a0001c0002t0019g0052 a0001c0002t0034g0133 a0001c0002t0049g0099 a0001c0002t0051g0061 a0001c0002t0060g0169 a0001c0005t0002g0116 a0001c0005t0003g0132 a0001c0006t0001g0003 a0001c0006t0001g0031 a0001c0006t0003g0024 a0001c0006t0018g0032 a0001c0006t0024g0023 a0001c0006t0075g0004 a0001c0007t0006g0006 a0001c0007t0025g0010 a0001c0007t0035g0021 a0001c0007t0058g0022 a0001c0008t0032g0125 a0001c0015t0019g0044 a0001c0017t0009g0150 a0002c0003t0017g0234 a0002c0003t0022g0252 a0002c0003t0022g0253 a0002c0003t0038g0245 a0002c0003t0085g0226 a0002c0003t0087g0248 a0002c0003t0097g0246 a0002c0004t0008g0265 a0002c0004t0012g0241 a0002c0004t0012g0266 a0002c0004t0012g0275 a0002c0004t0017g0229 a0002c0004t0040g0274 a0002c0004t0081g0222 a0002c0004t0084g0236 a0002c0009t0023g0216 a0002c0009t0028g0215 a0002c0009t0040g0267 a0002c0011t0006g0217 a0002c0011t0006g0219 a0002c0011t0025g0218 a0002c0029t0089g0268 a0003c0023t0005g0129 a0004c0016t0002g0049 a0004c0016t0002g0050	72	112	0.6429	-20	c.939 others(39): Show c.939-42273_939-42254delGTGTGTGTGTGTGTGTGTGT	TMTC1	ENSG00000133687.16	transcript	ENST00000539277.6	protein_coding	5/17			chr12	TogoVar
TMTC2_chr12_82681906_83139866	82963792	CATATATA others(13): Show CATATATATATATATATATAT	C C	intron_variant intron_variant	MODIFIER	HG01255.hp2 HG01255.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0032 a0001c0001t0032	a0001c0001t0032g0013 a0001c0001t0032g0013	1	16	0.0625	-20	c.159 others(39): Show c.1599-1193_1599-1174delATATATATATATATATATAT	TMTC2	ENSG00000179104.9	transcript	ENST00000321196.8	protein_coding	4/11		INFO_REALIGN_3_PRIME	chr12	TogoVar
TMTC2_chr12_82681906_83139866	83004722	ATTTTTTT others(13): Show ATTTTTTTTTTTTTTTTTTTT	A A	intron_variant intron_variant	MODIFIER	NA19030.hp2 NA19030.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0002 a0001c0001t0002	a0001c0001t0002g0038 a0001c0001t0002g0038	1	8	0.1250	-20	c.207 others(41): Show c.2070+18702_2070+18721delTTTTTTTTTTTTTTTTTTTT	TMTC2	ENSG00000179104.9	transcript	ENST00000321196.8	protein_coding	8/11		INFO_REALIGN_3_PRIME	chr12	TogoVar
TMTC2_chr12_82681906_83139866	83032257	TTATATAT others(13): Show TTATATATATATATATATATA	T T	intron_variant intron_variant	MODIFIER	HG02559.hp2 HG02559.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0005 a0001c0001t0005	a0001c0001t0005g0084 a0001c0001t0005g0084	1	18	0.0556	-20	c.215 others(39): Show c.2152+1397_2152+1416delTATATATATATATATATATA	TMTC2	ENSG00000179104.9	transcript	ENST00000321196.8	protein_coding	9/11		INFO_REALIGN_3_PRIME	chr12	TogoVar
TMTC4_chr13_100598625_100679795	100612654	TACACACA others(13): Show TACACACACACACACACACAC	T T	intron_variant intron_variant	MODIFIER	NA19082.hp2 NA19082.hp2	a0001 a0001	a0001c0002 a0001c0002	a0001c0002t0003 a0001c0002t0003	a0001c0002t0003g0181 a0001c0002t0003g0181	1	112	0.0089	-20	c.195 others(37): Show c.1952-164_1952-145delGTGTGTGTGTGTGTGTGTGT	TMTC4	ENSG00000125247.16	transcript	ENST00000342624.10	protein_coding	16/18			chr13	TogoVar
TMTC4_chr13_100598625_100679795	100668917	ACAATTTG others(13): Show ACAATTTGAAGCTGTGCTTCC	A A	intron_variant intron_variant	MODIFIER	HG00621.hp2 HG00621.hp2	a0001 a0001	a0001c0002 a0001c0002	a0001c0002t0001 a0001c0002t0001	a0001c0002t0001g0165 a0001c0002t0001g0165	1	344	0.0029	-20	c.4-1 others(31): Show c.4-143_4-124delGGAAGCACAGCTTCAAATTG	TMTC4	ENSG00000125247.16	transcript	ENST00000342624.10	protein_coding	2/18			chr13	TogoVar
TMX3_chr18_68668688_68720108	68708027	GTATATGT others(13): Show GTATATGTGTATATATGTGTA	G G	intron_variant intron_variant	MODIFIER	HG01255.hp2 HG02258.hp1 HG02572.hp1 others(8): Show HG01255.hp2 HG02258.hp1 HG02572.hp1 HG02630.hp2 HG02896.hp2 HG02970.hp1 HG03453.hp1 HG03540.hp1 NA18906.hp1 NA19030.hp2 NA21309.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0009 a0001c0001t0013 a0001c0001t0017 a0001c0001t0009 a0001c0001t0013 a0001c0001t0017	a0001c0001t0009g0019 a0001c0001t0009g0037 a0001c0001t0009g0149 others(3): Show a0001c0001t0009g0019 a0001c0001t0009g0037 a0001c0001t0009g0149 a0001c0001t0013g0020 a0001c0001t0013g0151 a0001c0001t0017g0044	11	315	0.0349	-20	c.265 others(37): Show c.265+1974_265+1993delTACACATATATACACATATA	TMX3	ENSG00000166479.10	transcript	ENST00000299608.7	protein_coding	4/15			chr18	TogoVar
TNC_chr9_115014575_115123157	115028924	GAAAAAAA others(13): Show GAAAAAAAAAAAAAAAAAAAA	G G	intron_variant intron_variant	MODIFIER	HG01884.hp2 HG01891.hp1 HG01891.hp2 others(10): Show HG01884.hp2 HG01891.hp1 HG01891.hp2 HG02055.hp2 HG02559.hp1 HG02572.hp1 HG02615.hp1 HG02622.hp2 HG02738.hp1 HG02809.hp2 HG03209.hp1 HG03471.hp2 NA20129.hp2	a0004 a0005 a0015 others(2): Show a0004 a0005 a0015 a0022 a0026	a0004c0073 a0004c0074 a0005c0037 others(3): Show a0004c0073 a0004c0074 a0005c0037 a0015c0021 a0022c0033 a0026c0046	a0004c0073t0002 a0004c0074t0002 a0005c0037t0004 others(3): Show a0004c0073t0002 a0004c0074t0002 a0005c0037t0004 a0015c0021t0004 a0022c0033t0001 a0026c0046t0004	a0004c0073t0002g0274 a0004c0074t0002g0286 a0005c0037t0004g0152 others(10): Show a0004c0073t0002g0274 a0004c0074t0002g0286 a0005c0037t0004g0152 a0005c0037t0004g0271 a0015c0021t0004g0129 a0015c0021t0004g0254 a0015c0021t0004g0255 a0015c0021t0004g0256 a0022c0033t0001g0126 a0022c0033t0001g0127 a0022c0033t0001g0338 a0026c0046t0004g0339 a0026c0046t0004g0340	13	51	0.2549	-20	c.616 others(37): Show c.6169+416_6169+435delTTTTTTTTTTTTTTTTTTTT	TNC	ENSG00000041982.17	transcript	ENST00000350763.9	protein_coding	25/27			chr9	TogoVar
TNC_chr9_115014575_115123157	115069722	TCCTTCCT others(13): Show TCCTTCCTCCCTTCCTCCCTC	T T	intron_variant intron_variant	MODIFIER	HG03471.hp2 HG03471.hp2	a0026 a0026	a0026c0046 a0026c0046	a0026c0046t0004 a0026c0046t0004	a0026c0046t0004g0340 a0026c0046t0004g0340	1	284	0.0035	-20	c.321 others(39): Show c.3214+3861_3214+3880delGAGGGAGGAAGGGAGGAAGG	TNC	ENSG00000041982.17	transcript	ENST00000350763.9	protein_coding	10/27			chr9	TogoVar
TNC_chr9_115014575_115123157	115069726	TCCTCCCT others(13): Show TCCTCCCTTCCTCCCTCCCTC	T T	intron_variant intron_variant	MODIFIER	HG01070.hp1 HG02109.hp2 HG04199.hp1 HG01070.hp1 HG02109.hp2 HG04199.hp1	a0008 a0033 a0035 a0008 a0033 a0035	a0008c0005 a0033c0090 a0035c0065 a0008c0005 a0033c0090 a0035c0065	a0008c0005t0001 a0033c0090t0001 a0035c0065t0005 a0008c0005t0001 a0033c0090t0001 a0035c0065t0005	a0008c0005t0001g0121 a0033c0090t0001g0116 a0035c0065t0005g0326 a0008c0005t0001g0121 a0033c0090t0001g0116 a0035c0065t0005g0326	3	313	0.0096	-20	c.321 others(39): Show c.3214+3857_3214+3876delGAGGGAGGGAGGAAGGGAGG	TNC	ENSG00000041982.17	transcript	ENST00000350763.9	protein_coding	10/27			chr9	TogoVar
TNC_chr9_115014575_115123157	115094814	CCTCTGTG others(13): Show CCTCTGTGTGTGTGTGTGTGT	C C	intron_variant intron_variant	MODIFIER	HG00323.hp1 HG00621.hp2 HG00741.hp1 others(12): Show HG00323.hp1 HG00621.hp2 HG00741.hp1 HG01074.hp1 HG01358.hp2 HG01928.hp1 HG01928.hp2 HG02273.hp2 HG03942.hp2 NA18612.hp2 NA18983.hp2 NA19058.hp1 NA19063.hp2 NA19080.hp1 NA21309.hp2	a0001 a0003 a0004 others(6): Show a0001 a0003 a0004 a0006 a0031 a0032 a0034 a0055 a0056	a0001c0009 a0003c0052 a0003c0055 others(7): Show a0001c0009 a0003c0052 a0003c0055 a0004c0045 a0006c0015 a0031c0053 a0032c0056 a0034c0054 a0055c0048 a0056c0049	a0001c0009t0001 a0003c0052t0001 a0003c0055t0001 others(8): Show a0001c0009t0001 a0003c0052t0001 a0003c0055t0001 a0004c0045t0002 a0006c0015t0002 a0006c0015t0005 a0031c0053t0018 a0032c0056t0001 a0034c0054t0005 a0055c0048t0005 a0056c0049t0002	a0001c0009t0001g0244 a0003c0052t0001g0234 a0003c0055t0001g0238 others(11): Show a0001c0009t0001g0244 a0003c0052t0001g0234 a0003c0055t0001g0238 a0004c0045t0002g0230 a0004c0045t0002g0231 a0006c0015t0002g0241 a0006c0015t0005g0004 a0006c0015t0005g0235 a0006c0015t0005g0236 a0031c0053t0018g0245 a0032c0056t0001g0232 a0034c0054t0005g0237 a0055c0048t0005g0243 a0056c0049t0002g0242	15	281	0.0534	-20	c.-13 others(39): Show c.-136-3680_-136-3661delACACACACACACACACAGAG	TNC	ENSG00000041982.17	transcript	ENST00000350763.9	protein_coding	1/27			chr9	TogoVar
TNFAIP2_chr14_103118461_103142439	103131983	AGAGGGGC others(13): Show AGAGGGGCCGCCTGGGGCTGG	A A	intron_variant intron_variant	MODIFIER	HG00099.hp2 HG00323.hp1 HG00738.hp1 others(13): Show HG00099.hp2 HG00323.hp1 HG00738.hp1 HG01081.hp2 HG01167.hp1 HG01261.hp2 HG01358.hp2 HG01943.hp1 HG01981.hp1 HG01993.hp1 HG01993.hp2 HG02723.hp2 NA18950.hp1 NA18959.hp1 NA18992.hp1 NA18995.hp2	a0002 a0010 a0002 a0010	a0002c0002 a0010c0013 a0002c0002 a0010c0013	a0002c0002t0002 a0002c0002t0004 a0002c0002t0005 others(3): Show a0002c0002t0002 a0002c0002t0004 a0002c0002t0005 a0002c0002t0013 a0002c0002t0027 a0010c0013t0036	a0002c0002t0002g0003 a0002c0002t0002g0087 a0002c0002t0004g0003 others(4): Show a0002c0002t0002g0003 a0002c0002t0002g0087 a0002c0002t0004g0003 a0002c0002t0005g0003 a0002c0002t0013g0003 a0002c0002t0027g0003 a0010c0013t0036g0042	16	92	0.1739	-20	c.142 others(37): Show c.1422+287_1422+306delGCCGCCTGGGGCTGGGAGGG	TNFAIP2	ENSG00000185215.11	transcript	ENST00000560869.6	protein_coding	8/11		INFO_REALIGN_3_PRIME	chr14	TogoVar
TNFAIP3_chr6_137862259_137888312	137869376	TGGACGGA others(13): Show TGGACGGACGGACGGACGGAC	T T	intron_variant intron_variant	MODIFIER	HG01081.hp2 HG01884.hp1 HG01928.hp2 others(14): Show HG01081.hp2 HG01884.hp1 HG01928.hp2 HG01978.hp2 HG01981.hp2 HG02280.hp2 HG02602.hp2 HG02683.hp2 HG02809.hp2 HG03471.hp2 HG03486.hp1 HG03669.hp2 HG03688.hp1 HG03927.hp1 HG04184.hp2 HG06807.hp2 NA19001.hp1	a0001 a0003 a0001 a0003	a0001c0001 a0003c0004 a0001c0001 a0003c0004	a0001c0001t0001 a0003c0004t0001 a0001c0001t0001 a0003c0004t0001	a0001c0001t0001g0013 a0001c0001t0001g0044 a0001c0001t0001g0094 others(2): Show a0001c0001t0001g0013 a0001c0001t0001g0044 a0001c0001t0001g0094 a0001c0001t0001g0095 a0003c0004t0001g0005	17	295	0.0576	-20	c.-15 others(37): Show c.-15-1833_-15-1814delCGGACGGACGGACGGACGGA	TNFAIP3	ENSG00000118503.18	transcript	ENST00000612899.5	protein_coding	1/8		INFO_REALIGN_3_PRIME	chr6	TogoVar
TNFRSF8_chr1_12058303_12149207	12087074	TATCCATC others(13): Show TATCCATCCATCCATCCATCC	T T	intron_variant intron_variant	MODIFIER	HG00280.hp2 HG00642.hp1 HG00738.hp2 others(21): Show HG00280.hp2 HG00642.hp1 HG00738.hp2 HG00741.hp2 HG01069.hp2 HG01074.hp2 HG01099.hp1 HG01167.hp1 HG01168.hp2 HG01169.hp2 HG01192.hp2 HG01516.hp2 HG01517.hp2 HG02040.hp1 HG02074.hp1 HG02293.hp1 HG02683.hp2 HG03017.hp2 HG03098.hp1 HG04115.hp2 NA18939.hp1 NA19010.hp1 NA19065.hp1 NA20129.hp1	a0001 a0003 a0004 a0001 a0003 a0004	a0001c0001 a0001c0002 a0001c0003 others(2): Show a0001c0001 a0001c0002 a0001c0003 a0003c0019 a0004c0022	a0001c0001t0001 a0001c0002t0001 a0001c0003t0001 others(2): Show a0001c0001t0001 a0001c0002t0001 a0001c0003t0001 a0003c0019t0004 a0004c0022t0001	a0001c0001t0001g0001 a0001c0001t0001g0006 a0001c0001t0001g0008 others(21): Show a0001c0001t0001g0001 a0001c0001t0001g0006 a0001c0001t0001g0008 a0001c0001t0001g0012 a0001c0001t0001g0014 a0001c0001t0001g0093 a0001c0001t0001g0098 a0001c0001t0001g0099 a0001c0001t0001g0100 a0001c0001t0001g0114 a0001c0001t0001g0115 a0001c0001t0001g0156 a0001c0001t0001g0157 a0001c0001t0001g0158 a0001c0001t0001g0244 a0001c0002t0001g0004 a0001c0002t0001g0015 a0001c0002t0001g0016 a0001c0002t0001g0134 a0001c0003t0001g0007 a0001c0003t0001g0076 a0001c0003t0001g0077 a0003c0019t0004g0017 a0004c0022t0001g0002	24	77	0.3117	-20	c.151 others(37): Show c.151+2559_151+2578delCATCCATCCATCCATCCATC	TNFRSF8	ENSG00000120949.15	transcript	ENST00000263932.7	protein_coding	2/14		INFO_REALIGN_3_PRIME	chr1	TogoVar
TNFSF10_chr3_172500508_172528430	172524394	CTTCTTTC others(13): Show CTTCTTTCTTTCTTTCTTTCT	C C	upstream_gene_variant upstream_gene_variant	MODIFIER	HG00738.hp2 HG01433.hp1 HG01928.hp1 others(9): Show HG00738.hp2 HG01433.hp1 HG01928.hp1 HG01934.hp2 HG01952.hp2 HG02886.hp2 HG03471.hp2 NA18906.hp1 NA18942.hp1 NA18993.hp1 NA19086.hp2 NA20752.hp1	a0001 a0001	a0001c0001 a0001c0002 a0001c0001 a0001c0002	a0001c0001t0001 a0001c0001t0005 a0001c0002t0002 a0001c0001t0001 a0001c0001t0005 a0001c0002t0002	a0001c0001t0001g0001 a0001c0001t0001g0011 a0001c0001t0001g0021 others(6): Show a0001c0001t0001g0001 a0001c0001t0001g0011 a0001c0001t0001g0021 a0001c0001t0001g0152 a0001c0001t0005g0009 a0001c0002t0002g0002 a0001c0002t0002g0034 a0001c0002t0002g0051 a0001c0002t0002g0175	12	94	0.1277	-20	c.-10 others(31): Show c.-1030_-1011delAGAAAGAAAGAAAGAAAGAA	TNFSF10	ENSG00000121858.11	transcript	ENST00000241261.7	protein_coding		965		chr3	TogoVar
TNFSF12_chr17_7544058_7562881	7553023	CTTTTTTT others(13): Show CTTTTTTTTTTTTTTTTTTTT	C C	intron_variant intron_variant	MODIFIER	NA19010.hp1 NA19083.hp1 NA19087.hp2 NA19010.hp1 NA19083.hp1 NA19087.hp2	a0001 a0001	a0001c0002 a0001c0002	a0001c0002t0001 a0001c0002t0001	a0001c0002t0001g0104 a0001c0002t0001g0105 a0001c0002t0001g0139 a0001c0002t0001g0104 a0001c0002t0001g0105 a0001c0002t0001g0139	3	37	0.0811	-20	c.373 others(37): Show c.373+2065_373+2084delTTTTTTTTTTTTTTTTTTTT	TNFSF12	ENSG00000239697.12	transcript	ENST00000293825.11	protein_coding	5/6		INFO_REALIGN_3_PRIME	chr17	TogoVar
TNFSF12_chr17_7544058_7562881	7562076	AGGCGGCG others(13): Show AGGCGGCGCGGCGGGGTGCTC	A A	downstream_gene_variant downstream_gene_variant	MODIFIER	HG02976.hp2 HG03041.hp1 HG02976.hp2 HG03041.hp1	a0001 a0001	a0001c0001 a0001c0006 a0001c0001 a0001c0006	a0001c0001t0001 a0001c0006t0001 a0001c0001t0001 a0001c0006t0001	a0001c0001t0001g0099 a0001c0006t0001g0079 a0001c0001t0001g0099 a0001c0006t0001g0079	2	434	0.0046	-20	c.47 others(31): Show c.4727_*4746delGGCGGCGCGGCGGGGTGCTC	TNFSF12	ENSG00000239697.12	transcript	ENST00000293825.11	protein_coding		4196		chr17	TogoVar
TNFSF13B_chr13_108264718_108313478	108271444	TCACACAC others(13): Show TCACACACACACACACACACA	T T	intron_variant intron_variant	MODIFIER	HG03225.hp1 HG03225.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0015 a0001c0001t0015	a0001c0001t0015g0309 a0001c0001t0015g0309	1	57	0.0175	-20	c.424 others(37): Show c.424+1046_424+1065delACACACACACACACACACAC	TNFSF13B	ENSG00000102524.12	transcript	ENST00000375887.9	protein_coding	2/5		INFO_REALIGN_3_PRIME	chr13	TogoVar
TNFSF13_chr17_7553750_7566601	7562076	AGGCGGCG others(13): Show AGGCGGCGCGGCGGGGTGCTC	A A	downstream_gene_variant downstream_gene_variant	MODIFIER	HG02976.hp1 HG03041.hp1 HG02976.hp1 HG03041.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0006 a0001c0001t0006	a0001c0001t0006g0001 a0001c0001t0006g0001	2	438	0.0046	-20	c.12 others(31): Show c.1244_*1263delGGCGGCGCGGCGGGGTGCTC	TNFSF13	ENSG00000161955.17	transcript	ENST00000338784.9	protein_coding		476		chr17	TogoVar
TNFSF14_chr19_6656253_6675160	6674188	CAAAATAA others(13): Show CAAAATAAAAGCAAACACAAA	C C	upstream_gene_variant upstream_gene_variant	MODIFIER	NA19065.hp2 NA19065.hp2	a0001 a0001	a0001c0002 a0001c0002	a0001c0002t0003 a0001c0002t0003	a0001c0002t0003g0217 a0001c0002t0003g0217	1	464	0.0022	-20	c.-41 others(31): Show c.-4139_-4120delTTTGTGTTTGCTTTTATTTT	TNFSF14	ENSG00000125735.11	transcript	ENST00000675206.1	protein_coding		4029		chr19	TogoVar

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