Joint Open Genome and Omics Platform (JoGo)

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ALDH2_chr12_111761933_111822532 / BRCA1_chr17_43039295_43130364 etc.

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Snpeff haplotype class

Snpeff annotation impact

Snpeff annotation impact detail

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regionname	pos	ref	alt	annotation	impact	samples	ahapids	achapids	acthapids	actghapids	ac	an	af	len	hgvs_c	genename	geneid	featuretype	featureid	transcript_biotype	rank	status	chr	external
CCSAP_chr1_229316015_229348047	229330750	CAGG CAGG	C C	intron_variant intron_variant	MODIFIER	HG02074.hp1 HG02132.hp2 NA19001.hp2 HG02074.hp1 HG02132.hp2 NA19001.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0009 a0001c0001t0001 a0001c0001t0009	a0001c0001t0001g0083 a0001c0001t0001g0112 a0001c0001t0009g0085 a0001c0001t0001g0083 a0001c0001t0001g0112 a0001c0001t0009g0085	3	436	0.0069	-3	c.368 others(20): Show c.368-3747_368-3745delCCT	CCSAP	ENSG00000154429.11	transcript	ENST00000284617.7	protein_coding	2/3		chr1	TogoVar
CCSAP_chr1_229316015_229348047	229331787	TTTA TTTA	T T	intron_variant intron_variant	MODIFIER	HG00140.hp2 HG00733.hp1 HG00735.hp2 others(23): Show HG00140.hp2 HG00733.hp1 HG00735.hp2 HG02040.hp1 HG02280.hp2 HG02486.hp2 HG02922.hp1 HG02965.hp2 HG02970.hp2 HG03195.hp1 HG03239.hp1 HG03486.hp2 HG03688.hp2 HG03704.hp1 HG04199.hp2 NA18747.hp1 NA18941.hp1 NA18941.hp2 NA18962.hp1 NA18970.hp1 NA18970.hp2 NA18984.hp1 NA18985.hp2 NA19012.hp1 NA19077.hp1 NA20300.hp2	a0001 a0002 a0001 a0002	a0001c0001 a0001c0002 a0002c0004 a0001c0001 a0001c0002 a0002c0004	a0001c0001t0001 a0001c0001t0004 a0001c0001t0006 others(7): Show a0001c0001t0001 a0001c0001t0004 a0001c0001t0006 a0001c0001t0009 a0001c0001t0012 a0001c0001t0018 a0001c0001t0028 a0001c0002t0002 a0001c0002t0023 a0002c0004t0001	a0001c0001t0001g0047 a0001c0001t0001g0101 a0001c0001t0004g0186 others(22): Show a0001c0001t0001g0047 a0001c0001t0001g0101 a0001c0001t0004g0186 a0001c0001t0006g0191 a0001c0001t0006g0192 a0001c0001t0006g0363 a0001c0001t0009g0082 a0001c0001t0012g0348 a0001c0001t0018g0050 a0001c0001t0028g0378 a0001c0002t0002g0031 a0001c0002t0002g0052 a0001c0002t0002g0063 a0001c0002t0002g0088 a0001c0002t0002g0135 a0001c0002t0002g0160 a0001c0002t0002g0162 a0001c0002t0002g0188 a0001c0002t0002g0215 a0001c0002t0002g0306 a0001c0002t0002g0312 a0001c0002t0002g0353 a0001c0002t0002g0356 a0001c0002t0023g0151 a0002c0004t0001g0042	26	436	0.0596	-3	c.368 others(20): Show c.368-4784_368-4782delTAA	CCSAP	ENSG00000154429.11	transcript	ENST00000284617.7	protein_coding	2/3		chr1	TogoVar
CCSAP_chr1_229316015_229348047	229339095	GAAA GAAA	G G	intron_variant intron_variant	MODIFIER	HG02257.hp1 HG02723.hp2 HG02818.hp1 others(7): Show HG02257.hp1 HG02723.hp2 HG02818.hp1 HG02965.hp1 HG02970.hp1 HG03041.hp2 HG03098.hp2 HG03209.hp2 HG03453.hp2 HG03486.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0005 a0001c0001t0006 a0001c0001t0015 others(1): Show a0001c0001t0005 a0001c0001t0006 a0001c0001t0015 a0001c0001t0032	a0001c0001t0005g0271 a0001c0001t0005g0272 a0001c0001t0006g0128 others(7): Show a0001c0001t0005g0271 a0001c0001t0005g0272 a0001c0001t0006g0128 a0001c0001t0006g0138 a0001c0001t0006g0139 a0001c0001t0006g0273 a0001c0001t0006g0279 a0001c0001t0006g0375 a0001c0001t0015g0278 a0001c0001t0032g0274	10	436	0.0229	-3	c.367 others(20): Show c.367+3001_367+3003delTTT	CCSAP	ENSG00000154429.11	transcript	ENST00000284617.7	protein_coding	2/3		chr1	TogoVar
CCSER1_chr4_90122394_91610295	90134041	TAAC TAAC	T T	intron_variant intron_variant	MODIFIER	HG01243.hp1 HG02717.hp1 HG02717.hp2 others(6): Show HG01243.hp1 HG02717.hp1 HG02717.hp2 HG02723.hp1 HG02886.hp1 HG03017.hp2 HG03209.hp1 HG03239.hp2 NA19240.hp2	a0001 a0002 a0003 others(1): Show a0001 a0002 a0003 a0005	a0001c0001 a0002c0002 a0003c0005 others(1): Show a0001c0001 a0002c0002 a0003c0005 a0005c0007	a0001c0001t0001 a0001c0001t0003 a0001c0001t0007 others(6): Show a0001c0001t0001 a0001c0001t0003 a0001c0001t0007 a0002c0002t0001 a0002c0002t0003 a0002c0002t0017 a0002c0002t0018 a0003c0005t0005 a0005c0007t0012	a0001c0001t0001g0001 a0001c0001t0003g0012 a0001c0001t0007g0007 others(6): Show a0001c0001t0001g0001 a0001c0001t0003g0012 a0001c0001t0007g0007 a0002c0002t0001g0006 a0002c0002t0003g0013 a0002c0002t0017g0008 a0002c0002t0018g0009 a0003c0005t0005g0011 a0005c0007t0012g0010	9	38	0.2368	-3	c.-42 others(20): Show c.-42+6216_-42+6218delCAA	CCSER1	ENSG00000184305.16	transcript	ENST00000509176.6	protein_coding	1/10	INFO_REALIGN_3_PRIME	chr4	TogoVar
CCSER1_chr4_90122394_91610295	90144286	GTGC GTGC	G G	intron_variant intron_variant	MODIFIER	HG01099.hp2 HG01192.hp1 HG01192.hp2 others(28): Show HG01099.hp2 HG01192.hp1 HG01192.hp2 HG01243.hp1 HG01243.hp2 HG01884.hp1 HG01884.hp2 HG02109.hp1 HG02109.hp2 HG02258.hp2 HG02717.hp1 HG02717.hp2 HG02723.hp1 HG02723.hp2 HG02809.hp1 HG02809.hp2 HG02886.hp1 HG02886.hp2 HG02897.hp1 HG03017.hp1 HG03017.hp2 HG03130.hp1 HG03130.hp2 HG03139.hp1 HG03209.hp1 HG03209.hp2 HG03239.hp2 HG03516.hp2 NA18906.hp1 NA19240.hp1 NA19240.hp2	a0001 a0002 a0003 others(3): Show a0001 a0002 a0003 a0004 a0005 a0006	a0001c0001 a0001c0003 a0001c0008 others(5): Show a0001c0001 a0001c0003 a0001c0008 a0002c0002 a0003c0005 a0004c0004 a0005c0007 a0006c0006	a0001c0001t0001 a0001c0001t0002 a0001c0001t0003 others(21): Show a0001c0001t0001 a0001c0001t0002 a0001c0001t0003 a0001c0001t0004 a0001c0001t0005 a0001c0001t0007 a0001c0001t0008 a0001c0001t0009 a0001c0001t0011 a0001c0001t0013 a0001c0001t0015 a0001c0001t0020 a0001c0003t0002 a0001c0008t0019 a0002c0002t0001 a0002c0002t0003 a0002c0002t0008 a0002c0002t0017 a0002c0002t0018 a0003c0005t0005 a0003c0005t0010 a0004c0004t0004 a0005c0007t0012 a0006c0006t0016	a0001c0001t0001g0001 a0001c0001t0001g0002 a0001c0001t0001g0016 others(28): Show a0001c0001t0001g0001 a0001c0001t0001g0002 a0001c0001t0001g0016 a0001c0001t0001g0032 a0001c0001t0002g0027 a0001c0001t0003g0012 a0001c0001t0003g0031 a0001c0001t0003g0034 a0001c0001t0004g0005 a0001c0001t0004g0022 a0001c0001t0005g0017 a0001c0001t0007g0007 a0001c0001t0007g0036 a0001c0001t0008g0038 a0001c0001t0009g0037 a0001c0001t0011g0003 a0001c0001t0013g0035 a0001c0001t0015g0019 a0001c0001t0020g0033 a0001c0003t0002g0014 a0001c0008t0019g0029 a0002c0002t0001g0006 a0002c0002t0003g0013 a0002c0002t0008g0030 a0002c0002t0017g0008 a0002c0002t0018g0009 a0003c0005t0005g0011 a0003c0005t0010g0004 a0004c0004t0004g0018 a0005c0007t0012g0010 a0006c0006t0016g0020	31	38	0.8158	-3	c.-42 others(22): Show c.-42+16460_-42+16462delGCT	CCSER1	ENSG00000184305.16	transcript	ENST00000509176.6	protein_coding	1/10	INFO_REALIGN_3_PRIME	chr4	TogoVar
CCSER1_chr4_90122394_91610295	90157442	TCTC TCTC	T T	intron_variant intron_variant	MODIFIER	HG01192.hp2 HG02109.hp2 HG01192.hp2 HG02109.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0003 a0001c0001t0001 a0001c0001t0003	a0001c0001t0001g0032 a0001c0001t0003g0031 a0001c0001t0001g0032 a0001c0001t0003g0031	2	38	0.0526	-3	c.-42 others(22): Show c.-42+29614_-42+29616delCCT	CCSER1	ENSG00000184305.16	transcript	ENST00000509176.6	protein_coding	1/10	INFO_REALIGN_3_PRIME	chr4	TogoVar
CCSER1_chr4_90122394_91610295	90163534	CTAT CTAT	C C	intron_variant intron_variant	MODIFIER	HG01243.hp2 HG02897.hp1 HG03130.hp1 HG01243.hp2 HG02897.hp1 HG03130.hp1	a0001 a0006 a0001 a0006	a0001c0001 a0001c0003 a0006c0006 a0001c0001 a0001c0003 a0006c0006	a0001c0001t0020 a0001c0003t0002 a0006c0006t0016 a0001c0001t0020 a0001c0003t0002 a0006c0006t0016	a0001c0001t0020g0033 a0001c0003t0002g0014 a0006c0006t0016g0020 a0001c0001t0020g0033 a0001c0003t0002g0014 a0006c0006t0016g0020	3	38	0.0790	-3	c.-42 others(22): Show c.-42+35712_-42+35714delTTA	CCSER1	ENSG00000184305.16	transcript	ENST00000509176.6	protein_coding	1/10	INFO_REALIGN_3_PRIME	chr4	TogoVar
CCSER1_chr4_90122394_91610295	90167022	ATCT ATCT	A A	intron_variant intron_variant	MODIFIER	HG02809.hp1 HG02897.hp2 HG02809.hp1 HG02897.hp2	a0001 a0002 a0001 a0002	a0001c0001 a0002c0002 a0001c0001 a0002c0002	a0001c0001t0001 a0002c0002t0006 a0001c0001t0001 a0002c0002t0006	a0001c0001t0001g0002 a0002c0002t0006g0025 a0001c0001t0001g0002 a0002c0002t0006g0025	2	38	0.0526	-3	c.-42 others(22): Show c.-42+39196_-42+39198delCTT	CCSER1	ENSG00000184305.16	transcript	ENST00000509176.6	protein_coding	1/10	INFO_REALIGN_3_PRIME	chr4	TogoVar
CCSER1_chr4_90122394_91610295	90255645	AACT AACT	A A	intron_variant intron_variant	MODIFIER	HG01192.hp1 HG01884.hp1 HG02109.hp1 others(5): Show HG01192.hp1 HG01884.hp1 HG02109.hp1 HG02258.hp2 HG02886.hp2 HG03209.hp2 HG03516.hp1 NA19240.hp1	a0001 a0003 a0001 a0003	a0001c0001 a0001c0003 a0003c0005 a0001c0001 a0001c0003 a0003c0005	a0001c0001t0002 a0001c0001t0003 a0001c0001t0007 others(5): Show a0001c0001t0002 a0001c0001t0003 a0001c0001t0007 a0001c0001t0009 a0001c0001t0011 a0001c0001t0013 a0001c0003t0002 a0003c0005t0010	a0001c0001t0002g0027 a0001c0001t0003g0034 a0001c0001t0007g0036 others(5): Show a0001c0001t0002g0027 a0001c0001t0003g0034 a0001c0001t0007g0036 a0001c0001t0009g0037 a0001c0001t0011g0003 a0001c0001t0013g0035 a0001c0003t0002g0026 a0003c0005t0010g0004	8	38	0.2105	-3	c.-41 others(22): Show c.-41-52595_-41-52593delACT	CCSER1	ENSG00000184305.16	transcript	ENST00000509176.6	protein_coding	1/10	INFO_REALIGN_3_PRIME	chr4	TogoVar
CCSER1_chr4_90122394_91610295	90271754	TTAA TTAA	T T	intron_variant intron_variant	MODIFIER	HG02109.hp1 HG02886.hp2 HG03130.hp1 others(3): Show HG02109.hp1 HG02886.hp2 HG03130.hp1 HG03209.hp2 HG03516.hp1 NA19240.hp1	a0001 a0001	a0001c0001 a0001c0003 a0001c0001 a0001c0003	a0001c0001t0003 a0001c0001t0007 a0001c0001t0009 others(2): Show a0001c0001t0003 a0001c0001t0007 a0001c0001t0009 a0001c0001t0013 a0001c0003t0002	a0001c0001t0003g0034 a0001c0001t0007g0036 a0001c0001t0009g0037 others(3): Show a0001c0001t0003g0034 a0001c0001t0007g0036 a0001c0001t0009g0037 a0001c0001t0013g0035 a0001c0003t0002g0014 a0001c0003t0002g0026	6	38	0.1579	-3	c.-41 others(22): Show c.-41-36486_-41-36484delTAA	CCSER1	ENSG00000184305.16	transcript	ENST00000509176.6	protein_coding	1/10	INFO_REALIGN_3_PRIME	chr4	TogoVar
CCSER1_chr4_90122394_91610295	90275619	CAAG CAAG	C C	intron_variant intron_variant	MODIFIER	HG02109.hp1 HG02886.hp2 HG03130.hp1 others(3): Show HG02109.hp1 HG02886.hp2 HG03130.hp1 HG03209.hp2 HG03516.hp1 NA19240.hp1	a0001 a0001	a0001c0001 a0001c0003 a0001c0001 a0001c0003	a0001c0001t0003 a0001c0001t0007 a0001c0001t0009 others(2): Show a0001c0001t0003 a0001c0001t0007 a0001c0001t0009 a0001c0001t0013 a0001c0003t0002	a0001c0001t0003g0034 a0001c0001t0007g0036 a0001c0001t0009g0037 others(3): Show a0001c0001t0003g0034 a0001c0001t0007g0036 a0001c0001t0009g0037 a0001c0001t0013g0035 a0001c0003t0002g0014 a0001c0003t0002g0026	6	38	0.1579	-3	c.-41 others(22): Show c.-41-32618_-41-32616delAAG	CCSER1	ENSG00000184305.16	transcript	ENST00000509176.6	protein_coding	1/10	INFO_REALIGN_3_PRIME	chr4	TogoVar
CCSER1_chr4_90122394_91610295	90276315	CTTT CTTT	C C	intron_variant intron_variant	MODIFIER	HG02258.hp2 HG03130.hp1 HG03516.hp1 HG02258.hp2 HG03130.hp1 HG03516.hp1	a0001 a0001	a0001c0001 a0001c0003 a0001c0001 a0001c0003	a0001c0001t0002 a0001c0003t0002 a0001c0001t0002 a0001c0003t0002	a0001c0001t0002g0027 a0001c0003t0002g0014 a0001c0003t0002g0026 a0001c0001t0002g0027 a0001c0003t0002g0014 a0001c0003t0002g0026	3	38	0.0790	-3	c.-41 others(22): Show c.-41-31926_-41-31924delTTT	CCSER1	ENSG00000184305.16	transcript	ENST00000509176.6	protein_coding	1/10	INFO_REALIGN_3_PRIME	chr4	TogoVar
CCSER1_chr4_90122394_91610295	90293198	AAAC AAAC	A A	intron_variant intron_variant	MODIFIER	HG01243.hp1 HG02717.hp2 HG02723.hp1 others(4): Show HG01243.hp1 HG02717.hp2 HG02723.hp1 HG02897.hp2 HG03017.hp2 HG03209.hp1 NA18906.hp1	a0002 a0005 a0002 a0005	a0002c0002 a0005c0007 a0002c0002 a0005c0007	a0002c0002t0001 a0002c0002t0003 a0002c0002t0006 others(4): Show a0002c0002t0001 a0002c0002t0003 a0002c0002t0006 a0002c0002t0008 a0002c0002t0017 a0002c0002t0018 a0005c0007t0012	a0002c0002t0001g0006 a0002c0002t0003g0013 a0002c0002t0006g0025 others(4): Show a0002c0002t0001g0006 a0002c0002t0003g0013 a0002c0002t0006g0025 a0002c0002t0008g0030 a0002c0002t0017g0008 a0002c0002t0018g0009 a0005c0007t0012g0010	7	38	0.1842	-3	c.-41 others(22): Show c.-41-15040_-41-15038delCAA	CCSER1	ENSG00000184305.16	transcript	ENST00000509176.6	protein_coding	1/10	INFO_REALIGN_3_PRIME	chr4	TogoVar
CCSER1_chr4_90122394_91610295	90314837	CTTT CTTT	C C	intron_variant intron_variant	MODIFIER	HG03130.hp1 HG03139.hp2 HG03516.hp1 HG03130.hp1 HG03139.hp2 HG03516.hp1	a0001 a0001	a0001c0003 a0001c0003	a0001c0003t0002 a0001c0003t0002	a0001c0003t0002g0014 a0001c0003t0002g0015 a0001c0003t0002g0026 a0001c0003t0002g0014 a0001c0003t0002g0015 a0001c0003t0002g0026	3	38	0.0790	-3	c.150 others(22): Show c.1509+1815_1509+1817delTTT	CCSER1	ENSG00000184305.16	transcript	ENST00000509176.6	protein_coding	3/10	INFO_REALIGN_3_PRIME	chr4	TogoVar
CCSER1_chr4_90122394_91610295	90360579	CAAA CAAA	C C	intron_variant intron_variant	MODIFIER	HG01884.hp2 HG02109.hp2 HG02717.hp1 HG01884.hp2 HG02109.hp2 HG02717.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0003 a0001c0001t0005 a0001c0001t0001 a0001c0001t0003 a0001c0001t0005	a0001c0001t0001g0032 a0001c0001t0003g0012 a0001c0001t0005g0017 a0001c0001t0001g0032 a0001c0001t0003g0012 a0001c0001t0005g0017	3	38	0.0790	-3	c.151 others(24): Show c.1510-39436_1510-39434delAAA	CCSER1	ENSG00000184305.16	transcript	ENST00000509176.6	protein_coding	3/10	INFO_REALIGN_3_PRIME	chr4	TogoVar
CCSER1_chr4_90122394_91610295	90364082	TTTC TTTC	T T	intron_variant intron_variant	MODIFIER	HG02723.hp2 HG02809.hp2 HG02897.hp1 HG02723.hp2 HG02809.hp2 HG02897.hp1	a0001 a0006 a0001 a0006	a0001c0001 a0006c0006 a0001c0001 a0006c0006	a0001c0001t0004 a0001c0001t0008 a0006c0006t0016 a0001c0001t0004 a0001c0001t0008 a0006c0006t0016	a0001c0001t0004g0022 a0001c0001t0008g0038 a0006c0006t0016g0020 a0001c0001t0004g0022 a0001c0001t0008g0038 a0006c0006t0016g0020	3	38	0.0790	-3	c.151 others(24): Show c.1510-35946_1510-35944delTCT	CCSER1	ENSG00000184305.16	transcript	ENST00000509176.6	protein_coding	3/10	INFO_REALIGN_3_PRIME	chr4	TogoVar
CCSER1_chr4_90122394_91610295	90369267	AAAG AAAG	A A	intron_variant intron_variant	MODIFIER	HG01099.hp2 HG01192.hp1 HG01884.hp1 others(15): Show HG01099.hp2 HG01192.hp1 HG01884.hp1 HG01884.hp2 HG02109.hp1 HG02109.hp2 HG02717.hp1 HG02809.hp1 HG02886.hp1 HG02886.hp2 HG03130.hp1 HG03130.hp2 HG03139.hp1 HG03139.hp2 HG03209.hp2 HG03239.hp1 HG03516.hp2 NA19240.hp1	a0001 a0003 a0004 a0001 a0003 a0004	a0001c0001 a0001c0003 a0001c0008 others(2): Show a0001c0001 a0001c0003 a0001c0008 a0003c0005 a0004c0004	a0001c0001t0001 a0001c0001t0003 a0001c0001t0004 others(12): Show a0001c0001t0001 a0001c0001t0003 a0001c0001t0004 a0001c0001t0005 a0001c0001t0006 a0001c0001t0007 a0001c0001t0009 a0001c0001t0011 a0001c0001t0013 a0001c0001t0015 a0001c0003t0002 a0001c0008t0019 a0003c0005t0005 a0003c0005t0010 a0004c0004t0004	a0001c0001t0001g0002 a0001c0001t0001g0032 a0001c0001t0003g0012 others(15): Show a0001c0001t0001g0002 a0001c0001t0001g0032 a0001c0001t0003g0012 a0001c0001t0003g0034 a0001c0001t0004g0005 a0001c0001t0005g0017 a0001c0001t0006g0023 a0001c0001t0007g0036 a0001c0001t0009g0037 a0001c0001t0011g0003 a0001c0001t0013g0035 a0001c0001t0015g0019 a0001c0003t0002g0014 a0001c0003t0002g0015 a0001c0008t0019g0029 a0003c0005t0005g0011 a0003c0005t0010g0004 a0004c0004t0004g0018	18	38	0.4737	-3	c.151 others(24): Show c.1510-30757_1510-30755delGAA	CCSER1	ENSG00000184305.16	transcript	ENST00000509176.6	protein_coding	3/10	INFO_REALIGN_3_PRIME	chr4	TogoVar
CCSER1_chr4_90122394_91610295	90369349	AAAG AAAG	A A	intron_variant intron_variant	MODIFIER	HG01099.hp2 HG01192.hp1 HG01884.hp1 others(15): Show HG01099.hp2 HG01192.hp1 HG01884.hp1 HG01884.hp2 HG02109.hp1 HG02109.hp2 HG02717.hp1 HG02809.hp1 HG02886.hp1 HG02886.hp2 HG03130.hp1 HG03130.hp2 HG03139.hp1 HG03139.hp2 HG03209.hp2 HG03239.hp1 HG03516.hp2 NA19240.hp1	a0001 a0003 a0004 a0001 a0003 a0004	a0001c0001 a0001c0003 a0001c0008 others(2): Show a0001c0001 a0001c0003 a0001c0008 a0003c0005 a0004c0004	a0001c0001t0001 a0001c0001t0003 a0001c0001t0004 others(12): Show a0001c0001t0001 a0001c0001t0003 a0001c0001t0004 a0001c0001t0005 a0001c0001t0006 a0001c0001t0007 a0001c0001t0009 a0001c0001t0011 a0001c0001t0013 a0001c0001t0015 a0001c0003t0002 a0001c0008t0019 a0003c0005t0005 a0003c0005t0010 a0004c0004t0004	a0001c0001t0001g0002 a0001c0001t0001g0032 a0001c0001t0003g0012 others(15): Show a0001c0001t0001g0002 a0001c0001t0001g0032 a0001c0001t0003g0012 a0001c0001t0003g0034 a0001c0001t0004g0005 a0001c0001t0005g0017 a0001c0001t0006g0023 a0001c0001t0007g0036 a0001c0001t0009g0037 a0001c0001t0011g0003 a0001c0001t0013g0035 a0001c0001t0015g0019 a0001c0003t0002g0014 a0001c0003t0002g0015 a0001c0008t0019g0029 a0003c0005t0005g0011 a0003c0005t0010g0004 a0004c0004t0004g0018	18	38	0.4737	-3	c.151 others(24): Show c.1510-30685_1510-30683delAGA	CCSER1	ENSG00000184305.16	transcript	ENST00000509176.6	protein_coding	3/10	INFO_REALIGN_3_PRIME	chr4	TogoVar
CCSER1_chr4_90122394_91610295	90461053	ATTT ATTT	A A	intron_variant intron_variant	MODIFIER	HG02717.hp1 HG02809.hp2 HG02886.hp1 others(3): Show HG02717.hp1 HG02809.hp2 HG02886.hp1 HG03130.hp2 HG03516.hp1 NA18906.hp1	a0001 a0002 a0003 a0001 a0002 a0003	a0001c0001 a0001c0003 a0002c0002 others(1): Show a0001c0001 a0001c0003 a0002c0002 a0003c0005	a0001c0001t0003 a0001c0001t0004 a0001c0001t0008 others(3): Show a0001c0001t0003 a0001c0001t0004 a0001c0001t0008 a0001c0003t0002 a0002c0002t0008 a0003c0005t0005	a0001c0001t0003g0012 a0001c0001t0004g0005 a0001c0001t0008g0038 others(3): Show a0001c0001t0003g0012 a0001c0001t0004g0005 a0001c0001t0008g0038 a0001c0003t0002g0026 a0002c0002t0008g0030 a0003c0005t0005g0011	6	38	0.1579	-3	c.160 others(22): Show c.1604-7153_1604-7151delTTT	CCSER1	ENSG00000184305.16	transcript	ENST00000509176.6	protein_coding	4/10	INFO_REALIGN_3_PRIME	chr4	TogoVar
CCSER1_chr4_90122394_91610295	90547160	TGAC TGAC	T T	intron_variant intron_variant	MODIFIER	HG01192.hp1 HG01243.hp2 HG02258.hp1 others(4): Show HG01192.hp1 HG01243.hp2 HG02258.hp1 HG02717.hp1 HG03139.hp2 HG03209.hp1 NA19240.hp2	a0001 a0002 a0001 a0002	a0001c0001 a0001c0003 a0002c0002 a0001c0001 a0001c0003 a0002c0002	a0001c0001t0001 a0001c0001t0003 a0001c0001t0007 others(4): Show a0001c0001t0001 a0001c0001t0003 a0001c0001t0007 a0001c0001t0011 a0001c0001t0020 a0001c0003t0002 a0002c0002t0018	a0001c0001t0001g0024 a0001c0001t0003g0012 a0001c0001t0007g0007 others(4): Show a0001c0001t0001g0024 a0001c0001t0003g0012 a0001c0001t0007g0007 a0001c0001t0011g0003 a0001c0001t0020g0033 a0001c0003t0002g0015 a0002c0002t0018g0009	7	38	0.1842	-3	c.172 others(24): Show c.1724+78807_1724+78809delGAC	CCSER1	ENSG00000184305.16	transcript	ENST00000509176.6	protein_coding	5/10		chr4	TogoVar
CCSER1_chr4_90122394_91610295	90572573	GTTA GTTA	G G	intron_variant intron_variant	MODIFIER	HG02109.hp1 HG02258.hp2 HG02723.hp2 others(6): Show HG02109.hp1 HG02258.hp2 HG02723.hp2 HG02809.hp1 HG02809.hp2 HG03209.hp2 HG03239.hp2 HG03516.hp2 NA19240.hp1	a0001 a0004 a0001 a0004	a0001c0001 a0004c0004 a0001c0001 a0004c0004	a0001c0001t0001 a0001c0001t0002 a0001c0001t0003 others(5): Show a0001c0001t0001 a0001c0001t0002 a0001c0001t0003 a0001c0001t0004 a0001c0001t0007 a0001c0001t0008 a0001c0001t0013 a0004c0004t0004	a0001c0001t0001g0001 a0001c0001t0001g0002 a0001c0001t0002g0027 others(6): Show a0001c0001t0001g0001 a0001c0001t0001g0002 a0001c0001t0002g0027 a0001c0001t0003g0034 a0001c0001t0004g0022 a0001c0001t0007g0036 a0001c0001t0008g0038 a0001c0001t0013g0035 a0004c0004t0004g0018	9	38	0.2368	-3	c.172 others(24): Show c.1725-55432_1725-55430delTAT	CCSER1	ENSG00000184305.16	transcript	ENST00000509176.6	protein_coding	5/10	INFO_REALIGN_3_PRIME	chr4	TogoVar
CCSER1_chr4_90122394_91610295	90574251	ATTT ATTT	A A	intron_variant intron_variant	MODIFIER	HG01192.hp2 HG03017.hp1 HG03139.hp1 others(2): Show HG01192.hp2 HG03017.hp1 HG03139.hp1 NA18906.hp1 NA19240.hp2	a0001 a0002 a0001 a0002	a0001c0001 a0001c0008 a0002c0002 a0001c0001 a0001c0008 a0002c0002	a0001c0001t0001 a0001c0001t0003 a0001c0001t0007 others(2): Show a0001c0001t0001 a0001c0001t0003 a0001c0001t0007 a0001c0008t0019 a0002c0002t0008	a0001c0001t0001g0016 a0001c0001t0003g0031 a0001c0001t0007g0007 others(2): Show a0001c0001t0001g0016 a0001c0001t0003g0031 a0001c0001t0007g0007 a0001c0008t0019g0029 a0002c0002t0008g0030	5	38	0.1316	-3	c.172 others(24): Show c.1725-53748_1725-53746delTTT	CCSER1	ENSG00000184305.16	transcript	ENST00000509176.6	protein_coding	5/10	INFO_REALIGN_3_PRIME	chr4	TogoVar
CCSER1_chr4_90122394_91610295	90593676	ATAT ATAT	A A	intron_variant intron_variant	MODIFIER	HG01099.hp2 HG01192.hp1 HG01192.hp2 others(27): Show HG01099.hp2 HG01192.hp1 HG01192.hp2 HG01243.hp1 HG01243.hp2 HG01884.hp1 HG02109.hp1 HG02717.hp1 HG02717.hp2 HG02723.hp1 HG02809.hp1 HG02809.hp2 HG02886.hp1 HG02886.hp2 HG02897.hp1 HG02897.hp2 HG03017.hp1 HG03130.hp1 HG03130.hp2 HG03139.hp1 HG03139.hp2 HG03209.hp1 HG03209.hp2 HG03239.hp2 HG03516.hp1 HG03516.hp2 NA18906.hp1 NA18906.hp2 NA19240.hp1 NA19240.hp2	a0001 a0002 a0003 others(3): Show a0001 a0002 a0003 a0004 a0005 a0006	a0001c0001 a0001c0003 a0001c0008 others(5): Show a0001c0001 a0001c0003 a0001c0008 a0002c0002 a0003c0005 a0004c0004 a0005c0007 a0006c0006	a0001c0001t0001 a0001c0001t0003 a0001c0001t0004 others(20): Show a0001c0001t0001 a0001c0001t0003 a0001c0001t0004 a0001c0001t0007 a0001c0001t0008 a0001c0001t0009 a0001c0001t0011 a0001c0001t0013 a0001c0001t0015 a0001c0001t0020 a0001c0003t0002 a0001c0008t0019 a0002c0002t0001 a0002c0002t0003 a0002c0002t0006 a0002c0002t0008 a0002c0002t0018 a0003c0005t0005 a0003c0005t0010 a0004c0004t0001 a0004c0004t0004 a0005c0007t0012 a0006c0006t0016	a0001c0001t0001g0001 a0001c0001t0001g0002 a0001c0001t0001g0016 others(27): Show a0001c0001t0001g0001 a0001c0001t0001g0002 a0001c0001t0001g0016 a0001c0001t0003g0012 a0001c0001t0003g0031 a0001c0001t0003g0034 a0001c0001t0004g0005 a0001c0001t0007g0007 a0001c0001t0007g0036 a0001c0001t0008g0038 a0001c0001t0009g0037 a0001c0001t0011g0003 a0001c0001t0013g0035 a0001c0001t0015g0019 a0001c0001t0020g0033 a0001c0003t0002g0014 a0001c0003t0002g0015 a0001c0003t0002g0026 a0001c0008t0019g0029 a0002c0002t0001g0006 a0002c0002t0003g0013 a0002c0002t0006g0025 a0002c0002t0008g0030 a0002c0002t0018g0009 a0003c0005t0005g0011 a0003c0005t0010g0004 a0004c0004t0001g0021 a0004c0004t0004g0018 a0005c0007t0012g0010 a0006c0006t0016g0020	30	38	0.7895	-3	c.172 others(24): Show c.1725-34344_1725-34342delATT	CCSER1	ENSG00000184305.16	transcript	ENST00000509176.6	protein_coding	5/10	INFO_REALIGN_3_PRIME	chr4	TogoVar
CCSER1_chr4_90122394_91610295	90608772	TTTC TTTC	T T	intron_variant intron_variant	MODIFIER	HG02258.hp2 HG02717.hp2 NA19240.hp2 HG02258.hp2 HG02717.hp2 NA19240.hp2	a0001 a0002 a0001 a0002	a0001c0001 a0002c0002 a0001c0001 a0002c0002	a0001c0001t0002 a0001c0001t0007 a0002c0002t0001 a0001c0001t0002 a0001c0001t0007 a0002c0002t0001	a0001c0001t0002g0027 a0001c0001t0007g0007 a0002c0002t0001g0006 a0001c0001t0002g0027 a0001c0001t0007g0007 a0002c0002t0001g0006	3	38	0.0790	-3	c.172 others(24): Show c.1725-19247_1725-19245delCTT	CCSER1	ENSG00000184305.16	transcript	ENST00000509176.6	protein_coding	5/10	INFO_REALIGN_3_PRIME	chr4	TogoVar
CCSER1_chr4_90122394_91610295	90626278	TAGC TAGC	T T	intron_variant intron_variant	MODIFIER	HG03130.hp2 HG03209.hp1 HG03130.hp2 HG03209.hp1	a0001 a0002 a0001 a0002	a0001c0001 a0002c0002 a0001c0001 a0002c0002	a0001c0001t0004 a0002c0002t0018 a0001c0001t0004 a0002c0002t0018	a0001c0001t0004g0005 a0002c0002t0018g0009 a0001c0001t0004g0005 a0002c0002t0018g0009	2	38	0.0526	-3	c.172 others(22): Show c.1725-1744_1725-1742delCAG	CCSER1	ENSG00000184305.16	transcript	ENST00000509176.6	protein_coding	5/10	INFO_REALIGN_3_PRIME	chr4	TogoVar
CCSER1_chr4_90122394_91610295	90630868	GATT GATT	G G	intron_variant intron_variant	MODIFIER	HG01192.hp1 HG02886.hp1 HG03516.hp1 HG01192.hp1 HG02886.hp1 HG03516.hp1	a0001 a0003 a0001 a0003	a0001c0001 a0001c0003 a0003c0005 a0001c0001 a0001c0003 a0003c0005	a0001c0001t0011 a0001c0003t0002 a0003c0005t0005 a0001c0001t0011 a0001c0003t0002 a0003c0005t0005	a0001c0001t0011g0003 a0001c0003t0002g0026 a0003c0005t0005g0011 a0001c0001t0011g0003 a0001c0003t0002g0026 a0003c0005t0005g0011	3	38	0.0790	-3	c.193 others(22): Show c.1932+2676_1932+2678delATT	CCSER1	ENSG00000184305.16	transcript	ENST00000509176.6	protein_coding	6/10	INFO_REALIGN_3_PRIME	chr4	TogoVar
CCSER1_chr4_90122394_91610295	90652836	TAGA TAGA	T T	intron_variant intron_variant	MODIFIER	HG01099.hp1 HG01884.hp1 HG02109.hp1 others(18): Show HG01099.hp1 HG01884.hp1 HG02109.hp1 HG02109.hp2 HG02258.hp1 HG02258.hp2 HG02717.hp2 HG02723.hp2 HG02886.hp2 HG02897.hp1 HG03017.hp2 HG03130.hp1 HG03130.hp2 HG03139.hp1 HG03139.hp2 HG03209.hp1 HG03209.hp2 HG03239.hp2 HG03516.hp2 NA18906.hp2 NA19240.hp1	a0001 a0002 a0003 others(2): Show a0001 a0002 a0003 a0004 a0006	a0001c0001 a0001c0003 a0001c0008 others(4): Show a0001c0001 a0001c0003 a0001c0008 a0002c0002 a0003c0005 a0004c0004 a0006c0006	a0001c0001t0001 a0001c0001t0002 a0001c0001t0003 others(14): Show a0001c0001t0001 a0001c0001t0002 a0001c0001t0003 a0001c0001t0004 a0001c0001t0007 a0001c0001t0009 a0001c0001t0013 a0001c0001t0014 a0001c0003t0002 a0001c0008t0019 a0002c0002t0001 a0002c0002t0017 a0002c0002t0018 a0003c0005t0010 a0004c0004t0001 a0004c0004t0004 a0006c0006t0016	a0001c0001t0001g0001 a0001c0001t0001g0024 a0001c0001t0001g0032 others(18): Show a0001c0001t0001g0001 a0001c0001t0001g0024 a0001c0001t0001g0032 a0001c0001t0002g0027 a0001c0001t0003g0034 a0001c0001t0004g0005 a0001c0001t0004g0022 a0001c0001t0007g0036 a0001c0001t0009g0037 a0001c0001t0013g0035 a0001c0001t0014g0028 a0001c0003t0002g0014 a0001c0003t0002g0015 a0001c0008t0019g0029 a0002c0002t0001g0006 a0002c0002t0017g0008 a0002c0002t0018g0009 a0003c0005t0010g0004 a0004c0004t0001g0021 a0004c0004t0004g0018 a0006c0006t0016g0020	21	38	0.5526	-3	c.193 others(24): Show c.1932+24609_1932+24611delGAA	CCSER1	ENSG00000184305.16	transcript	ENST00000509176.6	protein_coding	6/10	INFO_REALIGN_3_PRIME	chr4	TogoVar
CCSER1_chr4_90122394_91610295	90660661	TTTA TTTA	T T	intron_variant intron_variant	MODIFIER	HG01099.hp1 HG01884.hp1 HG02109.hp1 others(18): Show HG01099.hp1 HG01884.hp1 HG02109.hp1 HG02109.hp2 HG02258.hp1 HG02258.hp2 HG02717.hp2 HG02723.hp2 HG02886.hp2 HG02897.hp1 HG03017.hp2 HG03130.hp1 HG03130.hp2 HG03139.hp1 HG03139.hp2 HG03209.hp1 HG03209.hp2 HG03239.hp2 HG03516.hp2 NA18906.hp2 NA19240.hp1	a0001 a0002 a0003 others(2): Show a0001 a0002 a0003 a0004 a0006	a0001c0001 a0001c0003 a0001c0008 others(4): Show a0001c0001 a0001c0003 a0001c0008 a0002c0002 a0003c0005 a0004c0004 a0006c0006	a0001c0001t0001 a0001c0001t0002 a0001c0001t0003 others(14): Show a0001c0001t0001 a0001c0001t0002 a0001c0001t0003 a0001c0001t0004 a0001c0001t0007 a0001c0001t0009 a0001c0001t0013 a0001c0001t0014 a0001c0003t0002 a0001c0008t0019 a0002c0002t0001 a0002c0002t0017 a0002c0002t0018 a0003c0005t0010 a0004c0004t0001 a0004c0004t0004 a0006c0006t0016	a0001c0001t0001g0001 a0001c0001t0001g0024 a0001c0001t0001g0032 others(18): Show a0001c0001t0001g0001 a0001c0001t0001g0024 a0001c0001t0001g0032 a0001c0001t0002g0027 a0001c0001t0003g0034 a0001c0001t0004g0005 a0001c0001t0004g0022 a0001c0001t0007g0036 a0001c0001t0009g0037 a0001c0001t0013g0035 a0001c0001t0014g0028 a0001c0003t0002g0014 a0001c0003t0002g0015 a0001c0008t0019g0029 a0002c0002t0001g0006 a0002c0002t0017g0008 a0002c0002t0018g0009 a0003c0005t0010g0004 a0004c0004t0001g0021 a0004c0004t0004g0018 a0006c0006t0016g0020	21	38	0.5526	-3	c.193 others(24): Show c.1932+32431_1932+32433delTAT	CCSER1	ENSG00000184305.16	transcript	ENST00000509176.6	protein_coding	6/10	INFO_REALIGN_3_PRIME	chr4	TogoVar
CCSER1_chr4_90122394_91610295	90707529	TAAA TAAA	T T	intron_variant intron_variant	MODIFIER	HG02717.hp1 HG02886.hp1 HG02897.hp2 others(2): Show HG02717.hp1 HG02886.hp1 HG02897.hp2 HG03130.hp1 HG03516.hp2	a0001 a0002 a0003 others(1): Show a0001 a0002 a0003 a0004	a0001c0001 a0001c0003 a0002c0002 others(2): Show a0001c0001 a0001c0003 a0002c0002 a0003c0005 a0004c0004	a0001c0001t0003 a0001c0003t0002 a0002c0002t0006 others(2): Show a0001c0001t0003 a0001c0003t0002 a0002c0002t0006 a0003c0005t0005 a0004c0004t0004	a0001c0001t0003g0012 a0001c0003t0002g0014 a0002c0002t0006g0025 others(2): Show a0001c0001t0003g0012 a0001c0003t0002g0014 a0002c0002t0006g0025 a0003c0005t0005g0011 a0004c0004t0004g0018	5	38	0.1316	-3	c.193 others(24): Show c.1933-16377_1933-16375delAAA	CCSER1	ENSG00000184305.16	transcript	ENST00000509176.6	protein_coding	6/10	INFO_REALIGN_3_PRIME	chr4	TogoVar
CCSER1_chr4_90122394_91610295	90758339	TTGA TTGA	T T	intron_variant intron_variant	MODIFIER	HG01099.hp2 HG02717.hp1 HG02886.hp1 others(2): Show HG01099.hp2 HG02717.hp1 HG02886.hp1 HG02897.hp2 HG03516.hp2	a0001 a0002 a0003 others(1): Show a0001 a0002 a0003 a0004	a0001c0001 a0002c0002 a0003c0005 others(1): Show a0001c0001 a0002c0002 a0003c0005 a0004c0004	a0001c0001t0003 a0001c0001t0015 a0002c0002t0006 others(2): Show a0001c0001t0003 a0001c0001t0015 a0002c0002t0006 a0003c0005t0005 a0004c0004t0004	a0001c0001t0003g0012 a0001c0001t0015g0019 a0002c0002t0006g0025 others(2): Show a0001c0001t0003g0012 a0001c0001t0015g0019 a0002c0002t0006g0025 a0003c0005t0005g0011 a0004c0004t0004g0018	5	38	0.1316	-3	c.201 others(24): Show c.2010+34350_2010+34352delGAT	CCSER1	ENSG00000184305.16	transcript	ENST00000509176.6	protein_coding	7/10	INFO_REALIGN_3_PRIME	chr4	TogoVar
CCSER1_chr4_90122394_91610295	90796417	TTAA TTAA	T T	intron_variant intron_variant	MODIFIER	HG01192.hp1 HG01243.hp1 HG01243.hp2 others(15): Show HG01192.hp1 HG01243.hp1 HG01243.hp2 HG02109.hp1 HG02258.hp1 HG02258.hp2 HG02723.hp2 HG02809.hp1 HG02809.hp2 HG02886.hp2 HG02897.hp1 HG03139.hp1 HG03139.hp2 HG03209.hp1 HG03209.hp2 NA18906.hp1 NA18906.hp2 NA19240.hp1	a0001 a0002 a0004 others(2): Show a0001 a0002 a0004 a0005 a0006	a0001c0001 a0001c0003 a0001c0008 others(4): Show a0001c0001 a0001c0003 a0001c0008 a0002c0002 a0004c0004 a0005c0007 a0006c0006	a0001c0001t0001 a0001c0001t0002 a0001c0001t0003 others(14): Show a0001c0001t0001 a0001c0001t0002 a0001c0001t0003 a0001c0001t0004 a0001c0001t0007 a0001c0001t0008 a0001c0001t0009 a0001c0001t0011 a0001c0001t0013 a0001c0001t0020 a0001c0003t0002 a0001c0008t0019 a0002c0002t0008 a0002c0002t0018 a0004c0004t0001 a0005c0007t0012 a0006c0006t0016	a0001c0001t0001g0002 a0001c0001t0001g0024 a0001c0001t0002g0027 others(15): Show a0001c0001t0001g0002 a0001c0001t0001g0024 a0001c0001t0002g0027 a0001c0001t0003g0034 a0001c0001t0004g0022 a0001c0001t0007g0036 a0001c0001t0008g0038 a0001c0001t0009g0037 a0001c0001t0011g0003 a0001c0001t0013g0035 a0001c0001t0020g0033 a0001c0003t0002g0015 a0001c0008t0019g0029 a0002c0002t0008g0030 a0002c0002t0018g0009 a0004c0004t0001g0021 a0005c0007t0012g0010 a0006c0006t0016g0020	18	38	0.4737	-3	c.201 others(24): Show c.2011-19344_2011-19342delTAA	CCSER1	ENSG00000184305.16	transcript	ENST00000509176.6	protein_coding	7/10		chr4	TogoVar
CCSER1_chr4_90122394_91610295	90800256	TTTC TTTC	T T	intron_variant intron_variant	MODIFIER	HG01884.hp1 HG02717.hp2 HG02723.hp1 others(1): Show HG01884.hp1 HG02717.hp2 HG02723.hp1 NA18906.hp2	a0002 a0003 a0004 a0002 a0003 a0004	a0002c0002 a0003c0005 a0004c0004 a0002c0002 a0003c0005 a0004c0004	a0002c0002t0001 a0002c0002t0003 a0003c0005t0010 others(1): Show a0002c0002t0001 a0002c0002t0003 a0003c0005t0010 a0004c0004t0001	a0002c0002t0001g0006 a0002c0002t0003g0013 a0003c0005t0010g0004 others(1): Show a0002c0002t0001g0006 a0002c0002t0003g0013 a0003c0005t0010g0004 a0004c0004t0001g0021	4	38	0.1053	-3	c.201 others(24): Show c.2011-15497_2011-15495delCTT	CCSER1	ENSG00000184305.16	transcript	ENST00000509176.6	protein_coding	7/10	INFO_REALIGN_3_PRIME	chr4	TogoVar
CCSER1_chr4_90122394_91610295	90800736	TAGG TAGG	T T	intron_variant intron_variant	MODIFIER	HG01192.hp1 HG01243.hp1 HG01243.hp2 others(13): Show HG01192.hp1 HG01243.hp1 HG01243.hp2 HG02109.hp1 HG02258.hp1 HG02258.hp2 HG02723.hp2 HG02809.hp1 HG02809.hp2 HG02886.hp2 HG02897.hp1 HG03139.hp1 HG03139.hp2 HG03209.hp2 NA18906.hp1 NA19240.hp1	a0001 a0002 a0005 others(1): Show a0001 a0002 a0005 a0006	a0001c0001 a0001c0003 a0001c0008 others(3): Show a0001c0001 a0001c0003 a0001c0008 a0002c0002 a0005c0007 a0006c0006	a0001c0001t0001 a0001c0001t0002 a0001c0001t0003 others(12): Show a0001c0001t0001 a0001c0001t0002 a0001c0001t0003 a0001c0001t0004 a0001c0001t0007 a0001c0001t0008 a0001c0001t0009 a0001c0001t0011 a0001c0001t0013 a0001c0001t0020 a0001c0003t0002 a0001c0008t0019 a0002c0002t0008 a0005c0007t0012 a0006c0006t0016	a0001c0001t0001g0002 a0001c0001t0001g0024 a0001c0001t0002g0027 others(13): Show a0001c0001t0001g0002 a0001c0001t0001g0024 a0001c0001t0002g0027 a0001c0001t0003g0034 a0001c0001t0004g0022 a0001c0001t0007g0036 a0001c0001t0008g0038 a0001c0001t0009g0037 a0001c0001t0011g0003 a0001c0001t0013g0035 a0001c0001t0020g0033 a0001c0003t0002g0015 a0001c0008t0019g0029 a0002c0002t0008g0030 a0005c0007t0012g0010 a0006c0006t0016g0020	16	38	0.4211	-3	c.201 others(24): Show c.2011-15023_2011-15021delGAG	CCSER1	ENSG00000184305.16	transcript	ENST00000509176.6	protein_coding	7/10	INFO_REALIGN_3_PRIME	chr4	TogoVar
CCSER1_chr4_90122394_91610295	90802567	AATT AATT	A A	intron_variant intron_variant	MODIFIER	HG01192.hp1 HG01243.hp1 HG01243.hp2 others(13): Show HG01192.hp1 HG01243.hp1 HG01243.hp2 HG02109.hp1 HG02258.hp1 HG02258.hp2 HG02723.hp2 HG02809.hp1 HG02809.hp2 HG02886.hp2 HG02897.hp1 HG03139.hp1 HG03139.hp2 HG03209.hp2 NA18906.hp1 NA19240.hp1	a0001 a0002 a0005 others(1): Show a0001 a0002 a0005 a0006	a0001c0001 a0001c0003 a0001c0008 others(3): Show a0001c0001 a0001c0003 a0001c0008 a0002c0002 a0005c0007 a0006c0006	a0001c0001t0001 a0001c0001t0002 a0001c0001t0003 others(12): Show a0001c0001t0001 a0001c0001t0002 a0001c0001t0003 a0001c0001t0004 a0001c0001t0007 a0001c0001t0008 a0001c0001t0009 a0001c0001t0011 a0001c0001t0013 a0001c0001t0020 a0001c0003t0002 a0001c0008t0019 a0002c0002t0008 a0005c0007t0012 a0006c0006t0016	a0001c0001t0001g0002 a0001c0001t0001g0024 a0001c0001t0002g0027 others(13): Show a0001c0001t0001g0002 a0001c0001t0001g0024 a0001c0001t0002g0027 a0001c0001t0003g0034 a0001c0001t0004g0022 a0001c0001t0007g0036 a0001c0001t0008g0038 a0001c0001t0009g0037 a0001c0001t0011g0003 a0001c0001t0013g0035 a0001c0001t0020g0033 a0001c0003t0002g0015 a0001c0008t0019g0029 a0002c0002t0008g0030 a0005c0007t0012g0010 a0006c0006t0016g0020	16	38	0.4211	-3	c.201 others(24): Show c.2011-13190_2011-13188delTTA	CCSER1	ENSG00000184305.16	transcript	ENST00000509176.6	protein_coding	7/10	INFO_REALIGN_3_PRIME	chr4	TogoVar
CCSER1_chr4_90122394_91610295	90810644	TCAA TCAA	T T	intron_variant intron_variant	MODIFIER	HG01099.hp1 HG01192.hp2 HG03017.hp1 others(2): Show HG01099.hp1 HG01192.hp2 HG03017.hp1 HG03239.hp1 HG03516.hp1	a0001 a0001	a0001c0001 a0001c0003 a0001c0001 a0001c0003	a0001c0001t0001 a0001c0001t0003 a0001c0001t0006 others(2): Show a0001c0001t0001 a0001c0001t0003 a0001c0001t0006 a0001c0001t0014 a0001c0003t0002	a0001c0001t0001g0016 a0001c0001t0003g0031 a0001c0001t0006g0023 others(2): Show a0001c0001t0001g0016 a0001c0001t0003g0031 a0001c0001t0006g0023 a0001c0001t0014g0028 a0001c0003t0002g0026	5	38	0.1316	-3	c.201 others(22): Show c.2011-5083_2011-5081delAAC	CCSER1	ENSG00000184305.16	transcript	ENST00000509176.6	protein_coding	7/10	INFO_REALIGN_3_PRIME	chr4	TogoVar
CCSER1_chr4_90122394_91610295	90838029	TTTA TTTA	T T	intron_variant intron_variant	MODIFIER	HG01099.hp2 HG02886.hp1 HG02897.hp2 others(4): Show HG01099.hp2 HG02886.hp1 HG02897.hp2 HG03130.hp1 HG03209.hp1 HG03516.hp2 NA18906.hp2	a0001 a0002 a0003 others(1): Show a0001 a0002 a0003 a0004	a0001c0001 a0001c0003 a0002c0002 others(2): Show a0001c0001 a0001c0003 a0002c0002 a0003c0005 a0004c0004	a0001c0001t0015 a0001c0003t0002 a0002c0002t0006 others(4): Show a0001c0001t0015 a0001c0003t0002 a0002c0002t0006 a0002c0002t0018 a0003c0005t0005 a0004c0004t0001 a0004c0004t0004	a0001c0001t0015g0019 a0001c0003t0002g0014 a0002c0002t0006g0025 others(4): Show a0001c0001t0015g0019 a0001c0003t0002g0014 a0002c0002t0006g0025 a0002c0002t0018g0009 a0003c0005t0005g0011 a0004c0004t0001g0021 a0004c0004t0004g0018	7	38	0.1842	-3	c.209 others(24): Show c.2094+22187_2094+22189delATT	CCSER1	ENSG00000184305.16	transcript	ENST00000509176.6	protein_coding	8/10	INFO_REALIGN_3_PRIME	chr4	TogoVar
CCSER1_chr4_90122394_91610295	90875055	AAAC AAAC	A A	intron_variant intron_variant	MODIFIER	HG02109.hp1 HG02717.hp1 HG02723.hp2 others(3): Show HG02109.hp1 HG02717.hp1 HG02723.hp2 HG02809.hp2 HG03209.hp2 NA19240.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0003 a0001c0001t0004 a0001c0001t0007 others(2): Show a0001c0001t0003 a0001c0001t0004 a0001c0001t0007 a0001c0001t0008 a0001c0001t0013	a0001c0001t0003g0012 a0001c0001t0003g0034 a0001c0001t0004g0022 others(3): Show a0001c0001t0003g0012 a0001c0001t0003g0034 a0001c0001t0004g0022 a0001c0001t0007g0036 a0001c0001t0008g0038 a0001c0001t0013g0035	6	38	0.1579	-3	c.209 others(24): Show c.2095-48301_2095-48299delACA	CCSER1	ENSG00000184305.16	transcript	ENST00000509176.6	protein_coding	8/10	INFO_REALIGN_3_PRIME	chr4	TogoVar
CCSER1_chr4_90122394_91610295	90879488	GGAA GGAA	G G	intron_variant intron_variant	MODIFIER	HG01243.hp2 HG01884.hp1 HG02109.hp1 others(20): Show HG01243.hp2 HG01884.hp1 HG02109.hp1 HG02717.hp1 HG02717.hp2 HG02723.hp1 HG02723.hp2 HG02809.hp1 HG02809.hp2 HG02886.hp1 HG02886.hp2 HG02897.hp1 HG02897.hp2 HG03130.hp1 HG03130.hp2 HG03139.hp1 HG03139.hp2 HG03209.hp1 HG03209.hp2 HG03516.hp2 NA18906.hp1 NA18906.hp2 NA19240.hp1	a0001 a0002 a0003 others(2): Show a0001 a0002 a0003 a0004 a0006	a0001c0001 a0001c0003 a0001c0008 others(4): Show a0001c0001 a0001c0003 a0001c0008 a0002c0002 a0003c0005 a0004c0004 a0006c0006	a0001c0001t0001 a0001c0001t0003 a0001c0001t0004 others(17): Show a0001c0001t0001 a0001c0001t0003 a0001c0001t0004 a0001c0001t0007 a0001c0001t0008 a0001c0001t0009 a0001c0001t0013 a0001c0001t0020 a0001c0003t0002 a0001c0008t0019 a0002c0002t0001 a0002c0002t0003 a0002c0002t0006 a0002c0002t0008 a0002c0002t0018 a0003c0005t0005 a0003c0005t0010 a0004c0004t0001 a0004c0004t0004 a0006c0006t0016	a0001c0001t0001g0002 a0001c0001t0003g0012 a0001c0001t0003g0034 others(20): Show a0001c0001t0001g0002 a0001c0001t0003g0012 a0001c0001t0003g0034 a0001c0001t0004g0005 a0001c0001t0004g0022 a0001c0001t0007g0036 a0001c0001t0008g0038 a0001c0001t0009g0037 a0001c0001t0013g0035 a0001c0001t0020g0033 a0001c0003t0002g0014 a0001c0003t0002g0015 a0001c0008t0019g0029 a0002c0002t0001g0006 a0002c0002t0003g0013 a0002c0002t0006g0025 a0002c0002t0008g0030 a0002c0002t0018g0009 a0003c0005t0005g0011 a0003c0005t0010g0004 a0004c0004t0001g0021 a0004c0004t0004g0018 a0006c0006t0016g0020	23	38	0.6053	-3	c.209 others(24): Show c.2095-43855_2095-43853delAGA	CCSER1	ENSG00000184305.16	transcript	ENST00000509176.6	protein_coding	8/10	INFO_REALIGN_3_PRIME	chr4	TogoVar
CCSER1_chr4_90122394_91610295	90879606	AGAG AGAG	A A	intron_variant intron_variant	MODIFIER	HG01192.hp1 HG01243.hp1 HG01243.hp2 others(19): Show HG01192.hp1 HG01243.hp1 HG01243.hp2 HG01884.hp1 HG02109.hp1 HG02109.hp2 HG02258.hp2 HG02717.hp1 HG02717.hp2 HG02723.hp1 HG02723.hp2 HG02809.hp2 HG02886.hp1 HG02897.hp2 HG03130.hp1 HG03139.hp1 HG03209.hp1 HG03209.hp2 HG03239.hp2 NA18906.hp2 NA19240.hp1 NA19240.hp2	a0001 a0002 a0003 others(2): Show a0001 a0002 a0003 a0004 a0005	a0001c0001 a0001c0003 a0001c0008 others(4): Show a0001c0001 a0001c0003 a0001c0008 a0002c0002 a0003c0005 a0004c0004 a0005c0007	a0001c0001t0001 a0001c0001t0002 a0001c0001t0003 others(16): Show a0001c0001t0001 a0001c0001t0002 a0001c0001t0003 a0001c0001t0004 a0001c0001t0007 a0001c0001t0008 a0001c0001t0011 a0001c0001t0013 a0001c0001t0020 a0001c0003t0002 a0001c0008t0019 a0002c0002t0001 a0002c0002t0003 a0002c0002t0006 a0002c0002t0018 a0003c0005t0005 a0003c0005t0010 a0004c0004t0001 a0005c0007t0012	a0001c0001t0001g0001 a0001c0001t0001g0032 a0001c0001t0002g0027 others(19): Show a0001c0001t0001g0001 a0001c0001t0001g0032 a0001c0001t0002g0027 a0001c0001t0003g0012 a0001c0001t0003g0034 a0001c0001t0004g0022 a0001c0001t0007g0007 a0001c0001t0007g0036 a0001c0001t0008g0038 a0001c0001t0011g0003 a0001c0001t0013g0035 a0001c0001t0020g0033 a0001c0003t0002g0014 a0001c0008t0019g0029 a0002c0002t0001g0006 a0002c0002t0003g0013 a0002c0002t0006g0025 a0002c0002t0018g0009 a0003c0005t0005g0011 a0003c0005t0010g0004 a0004c0004t0001g0021 a0005c0007t0012g0010	22	38	0.5790	-3	c.209 others(24): Show c.2095-43743_2095-43741delGGA	CCSER1	ENSG00000184305.16	transcript	ENST00000509176.6	protein_coding	8/10	INFO_REALIGN_3_PRIME	chr4	TogoVar
CCSER1_chr4_90122394_91610295	90919089	TAAA TAAA	T T	intron_variant intron_variant	MODIFIER	HG02809.hp1 HG02886.hp1 HG03130.hp1 others(3): Show HG02809.hp1 HG02886.hp1 HG03130.hp1 HG03130.hp2 NA18906.hp1 NA19240.hp2	a0001 a0002 a0003 a0001 a0002 a0003	a0001c0001 a0001c0003 a0002c0002 others(1): Show a0001c0001 a0001c0003 a0002c0002 a0003c0005	a0001c0001t0001 a0001c0001t0004 a0001c0001t0007 others(3): Show a0001c0001t0001 a0001c0001t0004 a0001c0001t0007 a0001c0003t0002 a0002c0002t0008 a0003c0005t0005	a0001c0001t0001g0002 a0001c0001t0004g0005 a0001c0001t0007g0007 others(3): Show a0001c0001t0001g0002 a0001c0001t0004g0005 a0001c0001t0007g0007 a0001c0003t0002g0014 a0002c0002t0008g0030 a0003c0005t0005g0011	6	38	0.1579	-3	c.209 others(22): Show c.2095-4259_2095-4257delAAA	CCSER1	ENSG00000184305.16	transcript	ENST00000509176.6	protein_coding	8/10	INFO_REALIGN_3_PRIME	chr4	TogoVar
CCSER1_chr4_90122394_91610295	90933089	AAAG AAAG	A A	intron_variant intron_variant	MODIFIER	HG02897.hp2 HG03516.hp2 HG02897.hp2 HG03516.hp2	a0002 a0004 a0002 a0004	a0002c0002 a0004c0004 a0002c0002 a0004c0004	a0002c0002t0006 a0004c0004t0004 a0002c0002t0006 a0004c0004t0004	a0002c0002t0006g0025 a0004c0004t0004g0018 a0002c0002t0006g0025 a0004c0004t0004g0018	2	38	0.0526	-3	c.217 others(22): Show c.2172+9645_2172+9647delGAA	CCSER1	ENSG00000184305.16	transcript	ENST00000509176.6	protein_coding	9/10	INFO_REALIGN_3_PRIME	chr4	TogoVar
CCSER1_chr4_90122394_91610295	90943729	ATTT ATTT	A A	intron_variant intron_variant	MODIFIER	HG01243.hp1 HG02897.hp2 HG03516.hp2 HG01243.hp1 HG02897.hp2 HG03516.hp2	a0002 a0004 a0005 a0002 a0004 a0005	a0002c0002 a0004c0004 a0005c0007 a0002c0002 a0004c0004 a0005c0007	a0002c0002t0006 a0004c0004t0004 a0005c0007t0012 a0002c0002t0006 a0004c0004t0004 a0005c0007t0012	a0002c0002t0006g0025 a0004c0004t0004g0018 a0005c0007t0012g0010 a0002c0002t0006g0025 a0004c0004t0004g0018 a0005c0007t0012g0010	3	38	0.0790	-3	c.217 others(24): Show c.2172+20309_2172+20311delTTT	CCSER1	ENSG00000184305.16	transcript	ENST00000509176.6	protein_coding	9/10	INFO_REALIGN_3_PRIME	chr4	TogoVar
CCSER1_chr4_90122394_91610295	90966157	TAAG TAAG	T T	intron_variant intron_variant	MODIFIER	HG02109.hp1 HG02897.hp1 HG03209.hp1 HG02109.hp1 HG02897.hp1 HG03209.hp1	a0001 a0002 a0006 a0001 a0002 a0006	a0001c0001 a0002c0002 a0006c0006 a0001c0001 a0002c0002 a0006c0006	a0001c0001t0003 a0002c0002t0018 a0006c0006t0016 a0001c0001t0003 a0002c0002t0018 a0006c0006t0016	a0001c0001t0003g0034 a0002c0002t0018g0009 a0006c0006t0016g0020 a0001c0001t0003g0034 a0002c0002t0018g0009 a0006c0006t0016g0020	3	38	0.0790	-3	c.217 others(24): Show c.2172+42714_2172+42716delAAG	CCSER1	ENSG00000184305.16	transcript	ENST00000509176.6	protein_coding	9/10	INFO_REALIGN_3_PRIME	chr4	TogoVar
CCSER1_chr4_90122394_91610295	90988334	CAAA CAAA	C C	intron_variant intron_variant	MODIFIER	HG01243.hp1 HG02109.hp1 HG02717.hp1 others(10): Show HG01243.hp1 HG02109.hp1 HG02717.hp1 HG02717.hp2 HG02809.hp1 HG02886.hp1 HG02897.hp2 HG03139.hp2 HG03239.hp1 HG03516.hp2 NA18906.hp1 NA18906.hp2 NA19240.hp2	a0001 a0002 a0003 others(2): Show a0001 a0002 a0003 a0004 a0005	a0001c0001 a0001c0003 a0002c0002 others(3): Show a0001c0001 a0001c0003 a0002c0002 a0003c0005 a0004c0004 a0005c0007	a0001c0001t0001 a0001c0001t0003 a0001c0001t0006 others(9): Show a0001c0001t0001 a0001c0001t0003 a0001c0001t0006 a0001c0001t0007 a0001c0003t0002 a0002c0002t0001 a0002c0002t0006 a0002c0002t0008 a0003c0005t0005 a0004c0004t0001 a0004c0004t0004 a0005c0007t0012	a0001c0001t0001g0002 a0001c0001t0003g0012 a0001c0001t0003g0034 others(10): Show a0001c0001t0001g0002 a0001c0001t0003g0012 a0001c0001t0003g0034 a0001c0001t0006g0023 a0001c0001t0007g0007 a0001c0003t0002g0015 a0002c0002t0001g0006 a0002c0002t0006g0025 a0002c0002t0008g0030 a0003c0005t0005g0011 a0004c0004t0001g0021 a0004c0004t0004g0018 a0005c0007t0012g0010	13	38	0.3421	-3	c.217 others(24): Show c.2172+64914_2172+64916delAAA	CCSER1	ENSG00000184305.16	transcript	ENST00000509176.6	protein_coding	9/10	INFO_REALIGN_3_PRIME	chr4	TogoVar
CCSER1_chr4_90122394_91610295	90999879	GTTT GTTT	G G	intron_variant intron_variant	MODIFIER	HG01192.hp1 HG01192.hp2 HG01243.hp1 others(11): Show HG01192.hp1 HG01192.hp2 HG01243.hp1 HG02258.hp2 HG02717.hp2 HG02723.hp2 HG02886.hp1 HG02897.hp2 HG03017.hp1 HG03209.hp2 HG03516.hp2 NA18906.hp2 NA19240.hp1 NA19240.hp2	a0001 a0002 a0003 others(2): Show a0001 a0002 a0003 a0004 a0005	a0001c0001 a0002c0002 a0003c0005 others(2): Show a0001c0001 a0002c0002 a0003c0005 a0004c0004 a0005c0007	a0001c0001t0001 a0001c0001t0002 a0001c0001t0003 others(10): Show a0001c0001t0001 a0001c0001t0002 a0001c0001t0003 a0001c0001t0004 a0001c0001t0007 a0001c0001t0011 a0001c0001t0013 a0002c0002t0001 a0002c0002t0006 a0003c0005t0005 a0004c0004t0001 a0004c0004t0004 a0005c0007t0012	a0001c0001t0001g0016 a0001c0001t0002g0027 a0001c0001t0003g0031 others(11): Show a0001c0001t0001g0016 a0001c0001t0002g0027 a0001c0001t0003g0031 a0001c0001t0004g0022 a0001c0001t0007g0007 a0001c0001t0007g0036 a0001c0001t0011g0003 a0001c0001t0013g0035 a0002c0002t0001g0006 a0002c0002t0006g0025 a0003c0005t0005g0011 a0004c0004t0001g0021 a0004c0004t0004g0018 a0005c0007t0012g0010	14	38	0.3684	-3	c.217 others(24): Show c.2172+76446_2172+76448delTTT	CCSER1	ENSG00000184305.16	transcript	ENST00000509176.6	protein_coding	9/10	INFO_REALIGN_3_PRIME	chr4	TogoVar
CCSER1_chr4_90122394_91610295	91037584	CCTT CCTT	C C	intron_variant intron_variant	MODIFIER	HG01192.hp1 HG01243.hp2 HG02258.hp2 others(8): Show HG01192.hp1 HG01243.hp2 HG02258.hp2 HG02717.hp1 HG02723.hp2 HG02809.hp1 HG02897.hp1 HG03017.hp2 HG03139.hp2 HG03209.hp1 NA18906.hp1	a0001 a0002 a0006 a0001 a0002 a0006	a0001c0001 a0001c0003 a0002c0002 others(1): Show a0001c0001 a0001c0003 a0002c0002 a0006c0006	a0001c0001t0001 a0001c0001t0002 a0001c0001t0003 others(8): Show a0001c0001t0001 a0001c0001t0002 a0001c0001t0003 a0001c0001t0004 a0001c0001t0011 a0001c0001t0020 a0001c0003t0002 a0002c0002t0008 a0002c0002t0017 a0002c0002t0018 a0006c0006t0016	a0001c0001t0001g0002 a0001c0001t0002g0027 a0001c0001t0003g0012 others(8): Show a0001c0001t0001g0002 a0001c0001t0002g0027 a0001c0001t0003g0012 a0001c0001t0004g0022 a0001c0001t0011g0003 a0001c0001t0020g0033 a0001c0003t0002g0015 a0002c0002t0008g0030 a0002c0002t0017g0008 a0002c0002t0018g0009 a0006c0006t0016g0020	11	38	0.2895	-3	c.217 others(24): Show c.2173-48360_2173-48358delTCT	CCSER1	ENSG00000184305.16	transcript	ENST00000509176.6	protein_coding	9/10	INFO_REALIGN_3_PRIME	chr4	TogoVar
CCSER1_chr4_90122394_91610295	91043583	CTTT CTTT	C C	intron_variant intron_variant	MODIFIER	HG01243.hp1 HG02886.hp1 HG03209.hp2 others(3): Show HG01243.hp1 HG02886.hp1 HG03209.hp2 HG03516.hp2 NA19240.hp1 NA19240.hp2	a0001 a0003 a0004 others(1): Show a0001 a0003 a0004 a0005	a0001c0001 a0003c0005 a0004c0004 others(1): Show a0001c0001 a0003c0005 a0004c0004 a0005c0007	a0001c0001t0007 a0001c0001t0013 a0003c0005t0005 others(2): Show a0001c0001t0007 a0001c0001t0013 a0003c0005t0005 a0004c0004t0004 a0005c0007t0012	a0001c0001t0007g0007 a0001c0001t0007g0036 a0001c0001t0013g0035 others(3): Show a0001c0001t0007g0007 a0001c0001t0007g0036 a0001c0001t0013g0035 a0003c0005t0005g0011 a0004c0004t0004g0018 a0005c0007t0012g0010	6	38	0.1579	-3	c.217 others(24): Show c.2173-42345_2173-42343delTTT	CCSER1	ENSG00000184305.16	transcript	ENST00000509176.6	protein_coding	9/10	INFO_REALIGN_3_PRIME	chr4	TogoVar
CCSER1_chr4_90122394_91610295	91074251	AATT AATT	A A	intron_variant intron_variant	MODIFIER	HG01884.hp1 HG02886.hp1 HG01884.hp1 HG02886.hp1	a0003 a0003	a0003c0005 a0003c0005	a0003c0005t0005 a0003c0005t0010 a0003c0005t0005 a0003c0005t0010	a0003c0005t0005g0011 a0003c0005t0010g0004 a0003c0005t0005g0011 a0003c0005t0010g0004	2	38	0.0526	-3	c.217 others(24): Show c.2173-11697_2173-11695delTTA	CCSER1	ENSG00000184305.16	transcript	ENST00000509176.6	protein_coding	9/10	INFO_REALIGN_3_PRIME	chr4	TogoVar
CCSER1_chr4_90122394_91610295	91086462	GCTA GCTA	G G	intron_variant intron_variant	MODIFIER	HG01243.hp2 HG02717.hp1 HG02809.hp1 others(1): Show HG01243.hp2 HG02717.hp1 HG02809.hp1 NA18906.hp1	a0001 a0002 a0001 a0002	a0001c0001 a0002c0002 a0001c0001 a0002c0002	a0001c0001t0001 a0001c0001t0003 a0001c0001t0020 others(1): Show a0001c0001t0001 a0001c0001t0003 a0001c0001t0020 a0002c0002t0008	a0001c0001t0001g0002 a0001c0001t0003g0012 a0001c0001t0020g0033 others(1): Show a0001c0001t0001g0002 a0001c0001t0003g0012 a0001c0001t0020g0033 a0002c0002t0008g0030	4	38	0.1053	-3	c.221 others(20): Show c.2217+469_2217+471delCTA	CCSER1	ENSG00000184305.16	transcript	ENST00000509176.6	protein_coding	10/10		chr4	TogoVar
CCSER1_chr4_90122394_91610295	91111563	TAGG TAGG	T T	intron_variant intron_variant	MODIFIER	HG01243.hp1 HG03130.hp2 HG01243.hp1 HG03130.hp2	a0001 a0005 a0001 a0005	a0001c0001 a0005c0007 a0001c0001 a0005c0007	a0001c0001t0004 a0005c0007t0012 a0001c0001t0004 a0005c0007t0012	a0001c0001t0004g0005 a0005c0007t0012g0010 a0001c0001t0004g0005 a0005c0007t0012g0010	2	38	0.0526	-3	c.221 others(24): Show c.2217+25573_2217+25575delAGG	CCSER1	ENSG00000184305.16	transcript	ENST00000509176.6	protein_coding	10/10	INFO_REALIGN_3_PRIME	chr4	TogoVar

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