regionname | pos | ref | alt | annotation | impact | samples | ahapids | achapids | acthapids | actghapids | ac | an | af | len | hgvs_c | hgvs_p | genename | geneid | featuretype | featureid | transcript_biotype | rank | cdna cdna pos length
|
cds cds pos length
|
aa aa pos length
|
distance | status | chr | external |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
CHM_chrX_85856180_86052558 | 86050257 | CTTT | C | upstream_gene_variant | MODIFIER | HG02630.hp1 HG02723.hp1 HG02976.hp2 |
a0001 | a0001c0001 | a0001c0001t0007 | a0001c0001t0007g0076a0001c0001t0007g0077a0001c0001t0007g0080 | 3 | 245 | 0.0122 | -3 | c.-27 others(14): Show |
CHM | ENSG00000188419.14 | transcript | ENST00000357749.7 | protein_coding | 2700 | chrX | TogoVar | ||||||
CHN1_chr2_174793809_175010381 | 174805832 | TCTC | T | intron_variant | MODIFIER | HG00099.hp2 HG00140.hp2 HG00280.hp1 others(94): Show |
a0001a0002 | a0001c0001a0002c0002 | a0001c0001t0001a0001c0001t0003a0001c0001t0009others(1): Show | a0001c0001t0001g0036a0001c0001t0001g0094a0001c0001t0001g0095others(94): Show | 97 | 276 | 0.3515 | -3 | c.110 others(22): Show |
CHN1 | ENSG00000128656.15 | transcript | ENST00000409900.9 | protein_coding | 11/12 | chr2 | TogoVar | ||||||
CHN1_chr2_174793809_175010381 | 174842549 | AATT | A | intron_variant | MODIFIER | HG02055.hp1 HG02559.hp1 HG06807.hp1 |
a0001 | a0001c0001 | a0001c0001t0001 | a0001c0001t0001g0254a0001c0001t0001g0255a0001c0001t0001g0256 | 3 | 276 | 0.0109 | -3 | c.627 others(20): Show |
CHN1 | ENSG00000128656.15 | transcript | ENST00000409900.9 | protein_coding | 7/12 | chr2 | TogoVar | ||||||
CHN1_chr2_174793809_175010381 | 174847773 | CAAA | C | intron_variant | MODIFIER | HG01255.hp2 HG02258.hp2 HG03225.hp2 others(9): Show |
a0001a0002 | a0001c0001a0002c0002 | a0001c0001t0001a0001c0001t0003a0001c0001t0009others(1): Show | a0001c0001t0001g0064a0001c0001t0001g0195a0001c0001t0001g0206others(9): Show | 12 | 276 | 0.0435 | -3 | c.550 others(18): Show |
CHN1 | ENSG00000128656.15 | transcript | ENST00000409900.9 | protein_coding | 6/12 | chr2 | TogoVar | ||||||
CHN1_chr2_174793809_175010381 | 174871112 | GGGA | G | intron_variant | MODIFIER | HG02615.hp2 HG02809.hp1 HG02886.hp2 others(6): Show |
a0001 | a0001c0001 | a0001c0001t0004a0001c0001t0016 | a0001c0001t0004g0262a0001c0001t0004g0263a0001c0001t0004g0264others(6): Show | 9 | 276 | 0.0326 | -3 | c.549 others(20): Show |
CHN1 | ENSG00000128656.15 | transcript | ENST00000409900.9 | protein_coding | 6/12 | chr2 | TogoVar | ||||||
CHN1_chr2_174793809_175010381 | 174887316 | TAAC | T | intron_variant | MODIFIER | HG02615.hp2 HG02809.hp1 HG02886.hp2 others(6): Show |
a0001 | a0001c0001 | a0001c0001t0004a0001c0001t0016 | a0001c0001t0004g0262a0001c0001t0004g0263a0001c0001t0004g0264others(6): Show | 9 | 276 | 0.0326 | -3 | c.261 others(20): Show |
CHN1 | ENSG00000128656.15 | transcript | ENST00000409900.9 | protein_coding | 5/12 | chr2 | TogoVar | ||||||
CHN1_chr2_174793809_175010381 | 174894134 | ACTT | A | intron_variant | MODIFIER | HG00099.hp2 HG00140.hp2 HG00280.hp1 others(88): Show |
a0001a0002 | a0001c0001a0002c0002 | a0001c0001t0001a0001c0001t0003a0001c0001t0009others(2): Show | a0001c0001t0001g0036a0001c0001t0001g0094a0001c0001t0001g0095others(88): Show | 91 | 276 | 0.3297 | -3 | c.261 others(22): Show |
CHN1 | ENSG00000128656.15 | transcript | ENST00000409900.9 | protein_coding | 5/12 | chr2 | TogoVar | ||||||
CHN1_chr2_174793809_175010381 | 174910899 | CAAA | C | intron_variant | MODIFIER | HG01081.hp2 HG02055.hp1 HG02451.hp2 others(9): Show |
a0001 | a0001c0001 | a0001c0001t0001a0001c0001t0006 | a0001c0001t0001g0046a0001c0001t0001g0047a0001c0001t0001g0048others(9): Show | 12 | 276 | 0.0435 | -3 | c.260 others(20): Show |
CHN1 | ENSG00000128656.15 | transcript | ENST00000409900.9 | protein_coding | 5/12 | chr2 | TogoVar | ||||||
CHN1_chr2_174793809_175010381 | 174976126 | CAAA | C | intron_variant | MODIFIER | HG01891.hp2 HG02486.hp2 HG02735.hp1 others(4): Show |
a0001 | a0001c0001 | a0001c0001t0001a0001c0001t0004a0001c0001t0007 | a0001c0001t0001g0169a0001c0001t0001g0170a0001c0001t0001g0195others(4): Show | 7 | 276 | 0.0254 | -3 | c.20- others(20): Show |
CHN1 | ENSG00000128656.15 | transcript | ENST00000409900.9 | protein_coding | 1/12 | chr2 | TogoVar | ||||||
CHN2_chr7_29189775_29519328 | 29240798 | CTCT | C | intron_variant | MODIFIER | HG00642.hp2 HG03041.hp2 HG03453.hp2 |
a0001a0003 | a0001c0001a0001c0002a0003c0007 | a0001c0001t0011a0001c0002t0014a0003c0007t0013 | a0001c0001t0011g0073a0001c0002t0014g0019a0003c0007t0013g0135 | 3 | 232 | 0.0129 | -3 | c.49+ others(20): Show |
CHN2 | ENSG00000106069.26 | transcript | ENST00000222792.11 | protein_coding | 1/12 | INFO_REALIGN_3_PRIME | chr7 | TogoVar | |||||
CHN2_chr7_29189775_29519328 | 29240816 | TTCG | T | intron_variant | MODIFIER | HG02922.hp2 HG03139.hp1 |
a0001a0002 | a0001c0002a0002c0003 | a0001c0002t0016a0002c0003t0018 | a0001c0002t0016g0048a0002c0003t0018g0047 | 2 | 232 | 0.0086 | -3 | c.49+ others(20): Show |
CHN2 | ENSG00000106069.26 | transcript | ENST00000222792.11 | protein_coding | 1/12 | INFO_REALIGN_3_PRIME | chr7 | TogoVar | |||||
CHN2_chr7_29189775_29519328 | 29240834 | GTCT | G | intron_variant | MODIFIER | HG01069.hp1 HG01071.hp1 |
a0001 | a0001c0001 | a0001c0001t0012 | a0001c0001t0012g0055a0001c0001t0012g0056 | 2 | 232 | 0.0086 | -3 | c.49+ others(20): Show |
CHN2 | ENSG00000106069.26 | transcript | ENST00000222792.11 | protein_coding | 1/12 | INFO_REALIGN_3_PRIME | chr7 | TogoVar | |||||
CHN2_chr7_29189775_29519328 | 29250704 | ACTT | A | intron_variant | MODIFIER | HG01433.hp1 HG01928.hp1 HG01981.hp2 others(1): Show |
a0001a0002 | a0001c0001a0002c0003 | a0001c0001t0006a0001c0001t0008a0002c0003t0004 | a0001c0001t0006g0020a0001c0001t0006g0036a0001c0001t0008g0011others(1): Show | 4 | 232 | 0.0172 | -3 | c.49+ others(20): Show |
CHN2 | ENSG00000106069.26 | transcript | ENST00000222792.11 | protein_coding | 1/12 | INFO_REALIGN_3_PRIME | chr7 | TogoVar | |||||
CHN2_chr7_29189775_29519328 | 29264924 | AAGG | A | intron_variant | MODIFIER | HG00140.hp1 HG00140.hp2 HG00280.hp2 others(86): Show |
a0001a0002a0003 | a0001c0001a0001c0002a0001c0005others(4): Show | a0001c0001t0001a0001c0001t0003a0001c0001t0005others(20): Show | a0001c0001t0001g0005a0001c0001t0001g0026a0001c0001t0001g0034others(86): Show | 89 | 232 | 0.3836 | -3 | c.49+ others(20): Show |
CHN2 | ENSG00000106069.26 | transcript | ENST00000222792.11 | protein_coding | 1/12 | INFO_REALIGN_3_PRIME | chr7 | TogoVar | |||||
CHN2_chr7_29189775_29519328 | 29266946 | CCCT | C | intron_variant | MODIFIER | HG00140.hp1 HG00140.hp2 HG00280.hp2 others(115): Show |
a0001a0002a0003 | a0001c0001a0001c0002a0001c0005others(6): Show | a0001c0001t0001a0001c0001t0003a0001c0001t0005others(27): Show | a0001c0001t0001g0005a0001c0001t0001g0026a0001c0001t0001g0034others(115): Show | 118 | 232 | 0.5086 | -3 | c.49+ others(20): Show |
CHN2 | ENSG00000106069.26 | transcript | ENST00000222792.11 | protein_coding | 1/12 | INFO_REALIGN_3_PRIME | chr7 | TogoVar | |||||
CHN2_chr7_29189775_29519328 | 29271883 | TCTC | T | intron_variant | MODIFIER | HG02055.hp2 HG02615.hp1 HG03209.hp1 others(1): Show |
a0001a0002a0003 | a0001c0001a0002c0004a0003c0007 | a0001c0001t0006a0001c0001t0012a0002c0004t0005others(1): Show | a0001c0001t0006g0217a0001c0001t0012g0172a0002c0004t0005g0211others(1): Show | 4 | 232 | 0.0172 | -3 | c.49+ others(20): Show |
CHN2 | ENSG00000106069.26 | transcript | ENST00000222792.11 | protein_coding | 1/12 | INFO_REALIGN_3_PRIME | chr7 | TogoVar | |||||
CHN2_chr7_29189775_29519328 | 29280383 | CATA | C | intron_variant | MODIFIER | HG00140.hp1 HG00140.hp2 HG00280.hp2 others(140): Show |
a0001a0002a0003 | a0001c0001a0001c0002a0001c0005others(6): Show | a0001c0001t0001a0001c0001t0003a0001c0001t0005others(38): Show | a0001c0001t0001g0005a0001c0001t0001g0009a0001c0001t0001g0015others(140): Show | 143 | 232 | 0.6164 | -3 | c.50- others(20): Show |
CHN2 | ENSG00000106069.26 | transcript | ENST00000222792.11 | protein_coding | 1/12 | INFO_REALIGN_3_PRIME | chr7 | TogoVar | |||||
CHN2_chr7_29189775_29519328 | 29283922 | CTTT | C | intron_variant | MODIFIER | HG00140.hp1 HG01071.hp2 HG01109.hp2 others(16): Show |
a0001a0002 | a0001c0001a0001c0002a0001c0005others(1): Show | a0001c0001t0001a0001c0001t0005a0001c0001t0006others(9): Show | a0001c0001t0001g0005a0001c0001t0001g0034a0001c0001t0001g0103others(16): Show | 19 | 232 | 0.0819 | -3 | c.50- others(20): Show |
CHN2 | ENSG00000106069.26 | transcript | ENST00000222792.11 | protein_coding | 1/12 | INFO_REALIGN_3_PRIME | chr7 | TogoVar | |||||
CHN2_chr7_29189775_29519328 | 29288604 | TTTC | T | intron_variant | MODIFIER | HG02280.hp1 HG02723.hp2 HG02897.hp2 others(3): Show |
a0001 | a0001c0001a0001c0002 | a0001c0001t0001a0001c0001t0006a0001c0001t0011others(1): Show | a0001c0001t0001g0064a0001c0001t0001g0166a0001c0001t0006g0217others(3): Show | 6 | 232 | 0.0259 | -3 | c.50- others(20): Show |
CHN2 | ENSG00000106069.26 | transcript | ENST00000222792.11 | protein_coding | 1/12 | chr7 | TogoVar | ||||||
CHN2_chr7_29189775_29519328 | 29293362 | GCCC | G | intron_variant | MODIFIER | HG00597.hp1 HG00738.hp2 HG01167.hp2 others(25): Show |
a0001a0002a0003 | a0001c0001a0001c0002a0002c0003others(2): Show | a0001c0001t0001a0001c0001t0003a0001c0001t0005others(10): Show | a0001c0001t0001g0026a0001c0001t0001g0034a0001c0001t0001g0160others(25): Show | 28 | 232 | 0.1207 | -3 | c.50- others(20): Show |
CHN2 | ENSG00000106069.26 | transcript | ENST00000222792.11 | protein_coding | 1/12 | INFO_REALIGN_3_PRIME | chr7 | TogoVar | |||||
CHN2_chr7_29189775_29519328 | 29296084 | ATTT | A | intron_variant | MODIFIER | HG00738.hp2 HG01169.hp2 HG01175.hp2 others(38): Show |
a0001a0002a0003 | a0001c0001a0001c0002a0001c0005others(4): Show | a0001c0001t0001a0001c0001t0003a0001c0001t0005others(20): Show | a0001c0001t0001g0026a0001c0001t0001g0076a0001c0001t0001g0130others(38): Show | 41 | 232 | 0.1767 | -3 | c.50- others(20): Show |
CHN2 | ENSG00000106069.26 | transcript | ENST00000222792.11 | protein_coding | 1/12 | INFO_REALIGN_3_PRIME | chr7 | TogoVar | |||||
CHN2_chr7_29189775_29519328 | 29299630 | GTAT | G | intron_variant | MODIFIER | HG00140.hp2 HG00280.hp1 HG00558.hp1 others(70): Show |
a0001a0002a0003 | a0001c0001a0001c0002a0001c0005others(4): Show | a0001c0001t0001a0001c0001t0003a0001c0001t0005others(23): Show | a0001c0001t0001g0012a0001c0001t0001g0029a0001c0001t0001g0064others(70): Show | 73 | 232 | 0.3147 | -3 | c.50- others(20): Show |
CHN2 | ENSG00000106069.26 | transcript | ENST00000222792.11 | protein_coding | 1/12 | INFO_REALIGN_3_PRIME | chr7 | TogoVar | |||||
CHN2_chr7_29189775_29519328 | 29305819 | TCTC | T | intron_variant | MODIFIER | HG01192.hp2 HG02258.hp1 HG02615.hp2 others(4): Show |
a0001a0002 | a0001c0001a0001c0002a0001c0005others(1): Show | a0001c0001t0001a0001c0001t0005a0001c0002t0001others(3): Show | a0001c0001t0001g0015a0001c0001t0001g0130a0001c0001t0005g0221others(4): Show | 7 | 232 | 0.0302 | -3 | c.50- others(20): Show |
CHN2 | ENSG00000106069.26 | transcript | ENST00000222792.11 | protein_coding | 1/12 | INFO_REALIGN_3_PRIME | chr7 | TogoVar | |||||
CHN2_chr7_29189775_29519328 | 29334049 | CTTT | C | intron_variant | MODIFIER | HG00140.hp2 HG00280.hp1 HG00558.hp1 others(63): Show |
a0001a0002a0003 | a0001c0001a0001c0002a0001c0005others(5): Show | a0001c0001t0001a0001c0001t0003a0001c0001t0005others(24): Show | a0001c0001t0001g0012a0001c0001t0001g0026a0001c0001t0001g0034others(63): Show | 66 | 232 | 0.2845 | -3 | c.50- others(20): Show |
CHN2 | ENSG00000106069.26 | transcript | ENST00000222792.11 | protein_coding | 1/12 | INFO_REALIGN_3_PRIME | chr7 | TogoVar | |||||
CHN2_chr7_29189775_29519328 | 29336759 | CAAA | C | intron_variant | MODIFIER | HG01496.hp1 HG02922.hp2 HG02976.hp2 others(5): Show |
a0001a0002 | a0001c0001a0001c0002a0002c0003 | a0001c0001t0001a0001c0001t0005a0001c0001t0007others(3): Show | a0001c0001t0001g0166a0001c0001t0001g0192a0001c0001t0005g0129others(5): Show | 8 | 232 | 0.0345 | -3 | c.50- others(20): Show |
CHN2 | ENSG00000106069.26 | transcript | ENST00000222792.11 | protein_coding | 1/12 | INFO_REALIGN_3_PRIME | chr7 | TogoVar | |||||
CHN2_chr7_29189775_29519328 | 29375190 | CTTT | C | intron_variant | MODIFIER | HG00323.hp1 HG00323.hp2 HG00741.hp2 others(55): Show |
a0001a0002 | a0001c0001a0001c0002a0001c0005others(3): Show | a0001c0001t0001a0001c0001t0003a0001c0001t0005others(21): Show | a0001c0001t0001g0015a0001c0001t0001g0120a0001c0001t0001g0126others(55): Show | 58 | 232 | 0.2500 | -3 | c.144 others(20): Show |
CHN2 | ENSG00000106069.26 | transcript | ENST00000222792.11 | protein_coding | 3/12 | INFO_REALIGN_3_PRIME | chr7 | TogoVar | |||||
CHN2_chr7_29189775_29519328 | 29386588 | GATA | G | intron_variant | MODIFIER | HG02622.hp2 HG02818.hp1 HG02886.hp2 others(2): Show |
a0001a0002 | a0001c0001a0002c0004 | a0001c0001t0001a0001c0001t0011a0002c0004t0001others(1): Show | a0001c0001t0001g0103a0001c0001t0011g0046a0001c0001t0011g0164others(2): Show | 5 | 232 | 0.0216 | -3 | c.145 others(20): Show |
CHN2 | ENSG00000106069.26 | transcript | ENST00000222792.11 | protein_coding | 3/12 | INFO_REALIGN_3_PRIME | chr7 | TogoVar | |||||
CHN2_chr7_29189775_29519328 | 29398058 | AGGG | A | intron_variant | MODIFIER | HG00140.hp2 HG00280.hp1 HG00280.hp2 others(125): Show |
a0001a0002a0003 | a0001c0001a0001c0002a0001c0005others(5): Show | a0001c0001t0001a0001c0001t0003a0001c0001t0005others(33): Show | a0001c0001t0001g0025a0001c0001t0001g0082a0001c0001t0001g0103others(125): Show | 128 | 232 | 0.5517 | -3 | c.177 others(18): Show |
CHN2 | ENSG00000106069.26 | transcript | ENST00000222792.11 | protein_coding | 4/12 | INFO_REALIGN_3_PRIME | chr7 | TogoVar | |||||
CHN2_chr7_29189775_29519328 | 29398761 | ATTT | A | intron_variant | MODIFIER | HG00323.hp1 HG00738.hp2 HG00741.hp2 others(46): Show |
a0001a0002a0003 | a0001c0001a0001c0002a0001c0005others(5): Show | a0001c0001t0001a0001c0001t0003a0001c0001t0005others(26): Show | a0001c0001t0001g0103a0001c0001t0001g0140a0001c0001t0001g0141others(46): Show | 49 | 232 | 0.2112 | -3 | c.290 others(18): Show |
CHN2 | ENSG00000106069.26 | transcript | ENST00000222792.11 | protein_coding | 5/12 | INFO_REALIGN_3_PRIME | chr7 | TogoVar | |||||
CHN2_chr7_29189775_29519328 | 29400979 | ATCT | A | intron_variant | MODIFIER | HG02451.hp2 HG02622.hp1 HG03139.hp2 |
a0001 | a0001c0001a0001c0002 | a0001c0001t0001a0001c0002t0001 | a0001c0001t0001g0120a0001c0001t0001g0126a0001c0002t0001g0085 | 3 | 232 | 0.0129 | -3 | c.576 others(18): Show |
CHN2 | ENSG00000106069.26 | transcript | ENST00000222792.11 | protein_coding | 6/12 | INFO_REALIGN_3_PRIME | chr7 | TogoVar | |||||
CHN2_chr7_29189775_29519328 | 29419631 | TCAA | T | intron_variant | MODIFIER | HG02109.hp2 HG02572.hp2 |
a0001a0002 | a0001c0002a0002c0003 | a0001c0002t0002a0002c0003t0021 | a0001c0002t0002g0171a0002c0003t0021g0112 | 2 | 232 | 0.0086 | -3 | c.576 others(22): Show |
CHN2 | ENSG00000106069.26 | transcript | ENST00000222792.11 | protein_coding | 6/12 | INFO_REALIGN_3_PRIME | chr7 | TogoVar | |||||
CHN2_chr7_29189775_29519328 | 29436944 | TTAA | T | intron_variant | MODIFIER | HG00738.hp2 HG01069.hp1 HG01071.hp1 others(21): Show |
a0001a0002a0003 | a0001c0001a0001c0002a0001c0006others(2): Show | a0001c0001t0001a0001c0001t0006a0001c0001t0012others(8): Show | a0001c0001t0001g0029a0001c0001t0001g0076a0001c0001t0001g0126others(21): Show | 24 | 232 | 0.1035 | -3 | c.576 others(22): Show |
CHN2 | ENSG00000106069.26 | transcript | ENST00000222792.11 | protein_coding | 6/12 | INFO_REALIGN_3_PRIME | chr7 | TogoVar | |||||
CHN2_chr7_29189775_29519328 | 29455890 | GAAC | G | intron_variant | MODIFIER | HG02055.hp1 NA18906.hp1 |
a0001a0002 | a0001c0005a0002c0009 | a0001c0005t0001a0002c0009t0002 | a0001c0005t0001g0137a0002c0009t0002g0033 | 2 | 232 | 0.0086 | -3 | c.577 others(22): Show |
CHN2 | ENSG00000106069.26 | transcript | ENST00000222792.11 | protein_coding | 6/12 | INFO_REALIGN_3_PRIME | chr7 | TogoVar | |||||
CHN2_chr7_29189775_29519328 | 29482797 | CTTT | C | intron_variant | MODIFIER | HG00323.hp2 HG00597.hp2 HG02280.hp1 others(6): Show |
a0001 | a0001c0001 | a0001c0001t0001a0001c0001t0003a0001c0001t0006others(1): Show | a0001c0001t0001g0064a0001c0001t0003g0044a0001c0001t0003g0087others(6): Show | 9 | 232 | 0.0388 | -3 | c.654 others(20): Show |
CHN2 | ENSG00000106069.26 | transcript | ENST00000222792.11 | protein_coding | 7/12 | INFO_REALIGN_3_PRIME | chr7 | TogoVar | |||||
CHN2_chr7_29189775_29519328 | 29490125 | TTTG | T | intron_variant | MODIFIER | HG00140.hp1 HG00280.hp1 HG00642.hp2 others(15): Show |
a0001 | a0001c0001a0001c0002a0001c0005 | a0001c0001t0001a0001c0001t0003a0001c0001t0008others(5): Show | a0001c0001t0001g0005a0001c0001t0001g0012a0001c0001t0001g0213others(15): Show | 18 | 232 | 0.0776 | -3 | c.655 others(20): Show |
CHN2 | ENSG00000106069.26 | transcript | ENST00000222792.11 | protein_coding | 7/12 | chr7 | TogoVar | ||||||
CHN2_chr7_29189775_29519328 | 29494950 | TAAA | T | intron_variant | MODIFIER | HG01071.hp2 HG01496.hp2 HG01891.hp1 others(5): Show |
a0001 | a0001c0001a0001c0002 | a0001c0001t0006a0001c0001t0008a0001c0002t0002others(2): Show | a0001c0001t0006g0037a0001c0001t0006g0066a0001c0001t0006g0145others(5): Show | 8 | 232 | 0.0345 | -3 | c.655 others(18): Show |
CHN2 | ENSG00000106069.26 | transcript | ENST00000222792.11 | protein_coding | 7/12 | INFO_REALIGN_3_PRIME | chr7 | TogoVar | |||||
CHN2_chr7_29189775_29519328 | 29498758 | CTTT | C | intron_variant | MODIFIER | HG00323.hp2 HG00438.hp1 HG00558.hp1 others(84): Show |
a0001a0002a0003 | a0001c0001a0001c0002a0001c0005others(6): Show | a0001c0001t0001a0001c0001t0003a0001c0001t0005others(28): Show | a0001c0001t0001g0120a0001c0001t0001g0160a0001c0001t0001g0225others(84): Show | 87 | 232 | 0.3750 | -3 | c.740 others(20): Show |
CHN2 | ENSG00000106069.26 | transcript | ENST00000222792.11 | protein_coding | 8/12 | INFO_REALIGN_3_PRIME | chr7 | TogoVar | |||||
CHN2_chr7_29189775_29519328 | 29508418 | TAAA | T | intron_variant | MODIFIER | HG00741.hp2 HG01928.hp2 HG02280.hp2 others(3): Show |
a0001 | a0001c0002a0001c0005 | a0001c0002t0001a0001c0002t0002a0001c0005t0001 | a0001c0002t0001g0134a0001c0002t0002g0030a0001c0002t0002g0086others(3): Show | 6 | 232 | 0.0259 | -3 | c.113 others(20): Show |
CHN2 | ENSG00000106069.26 | transcript | ENST00000222792.11 | protein_coding | 11/12 | INFO_REALIGN_3_PRIME | chr7 | TogoVar | |||||
CHN2_chr7_29189775_29519328 | 29513180 | ATGT | A | 3_prime_UTR_variant | MODIFIER | HG00673.hp2 HG02040.hp1 NA18612.hp2 others(4): Show |
a0001 | a0001c0001 | a0001c0001t0009 | a0001c0001t0009g0017a0001c0001t0009g0043a0001c0001t0009g0054others(4): Show | 7 | 232 | 0.0302 | -3 | c.*45 others(12): Show |
CHN2 | ENSG00000106069.26 | transcript | ENST00000222792.11 | protein_coding | 13/13 | 450 | INFO_REALIGN_3_PRIME | chr7 | TogoVar | ||||
CHN2_chr7_29189775_29519328 | 29515341 | GAGA | G | downstream_gene_variant | MODIFIER | HG02055.hp2 HG02886.hp1 HG03041.hp2 |
a0003 | a0003c0007 | a0003c0007t0013 | a0003c0007t0013g0013a0003c0007t0013g0035a0003c0007t0013g0135 | 3 | 232 | 0.0129 | -3 | c.*26 others(14): Show |
CHN2 | ENSG00000106069.26 | transcript | ENST00000222792.11 | protein_coding | 1014 | chr7 | TogoVar | ||||||
CHODL_chr21_18239833_18272370 | 18245457 | TCTC | T | intron_variant | MODIFIER | HG02723.hp2 HG03195.hp1 HG03540.hp1 others(1): Show |
a0001 | a0001c0001 | a0001c0001t0007 | a0001c0001t0007g0023a0001c0001t0007g0049a0001c0001t0007g0050 | 4 | 402 | 0.0100 | -3 | c.79+ others(16): Show |
CHODL | ENSG00000154645.14 | transcript | ENST00000299295.7 | protein_coding | 1/5 | INFO_REALIGN_3_PRIME | chr21 | TogoVar | |||||
CHODL_chr21_18239833_18272370 | 18249040 | ATAT | A | intron_variant | MODIFIER | HG00280.hp2 HG02135.hp2 HG03669.hp2 others(1): Show |
a0001 | a0001c0001 | a0001c0001t0001a0001c0001t0002a0001c0001t0004 | a0001c0001t0001g0076a0001c0001t0001g0077a0001c0001t0002g0075others(1): Show | 4 | 402 | 0.0100 | -3 | c.79+ others(18): Show |
CHODL | ENSG00000154645.14 | transcript | ENST00000299295.7 | protein_coding | 1/5 | INFO_REALIGN_3_PRIME | chr21 | TogoVar | |||||
CHODL_chr21_18239833_18272370 | 18251397 | TATA | T | intron_variant | MODIFIER | HG00741.hp2 HG01243.hp2 HG03130.hp2 others(2): Show |
a0001 | a0001c0001 | a0001c0001t0013a0001c0001t0014a0001c0001t0030 | a0001c0001t0013g0048a0001c0001t0014g0304a0001c0001t0014g0305others(1): Show | 5 | 402 | 0.0124 | -3 | c.80- others(18): Show |
CHODL | ENSG00000154645.14 | transcript | ENST00000299295.7 | protein_coding | 1/5 | INFO_REALIGN_3_PRIME | chr21 | TogoVar | |||||
CHODL_chr21_18239833_18272370 | 18251551 | ATAT | A | intron_variant | MODIFIER | HG00639.hp1 HG02258.hp2 HG02280.hp1 others(11): Show |
a0001 | a0001c0001a0001c0002 | a0001c0001t0001a0001c0001t0003a0001c0001t0007others(3): Show | a0001c0001t0001g0109a0001c0001t0003g0273a0001c0001t0003g0274others(8): Show | 14 | 402 | 0.0348 | -3 | c.80- others(18): Show |
CHODL | ENSG00000154645.14 | transcript | ENST00000299295.7 | protein_coding | 1/5 | INFO_REALIGN_3_PRIME | chr21 | TogoVar | |||||
CHODL_chr21_18239833_18272370 | 18256490 | ATCT | A | intron_variant | MODIFIER | HG02109.hp1 HG02145.hp1 HG02451.hp2 others(13): Show |
a0001 | a0001c0001 | a0001c0001t0005a0001c0001t0009a0001c0001t0012others(6): Show | a0001c0001t0005g0047a0001c0001t0005g0288a0001c0001t0005g0291others(12): Show | 16 | 402 | 0.0398 | -3 | c.80- others(14): Show |
CHODL | ENSG00000154645.14 | transcript | ENST00000299295.7 | protein_coding | 1/5 | INFO_REALIGN_3_PRIME | chr21 | TogoVar | |||||
CHODL_chr21_18239833_18272370 | 18260847 | CAAA | C | intron_variant | MODIFIER | HG02280.hp1 HG02280.hp2 HG02451.hp2 others(3): Show |
a0001 | a0001c0001 | a0001c0001t0012a0001c0001t0015a0001c0001t0020others(3): Show | a0001c0001t0012g0248a0001c0001t0015g0249a0001c0001t0020g0292others(3): Show | 6 | 402 | 0.0149 | -3 | c.634 others(18): Show |
CHODL | ENSG00000154645.14 | transcript | ENST00000299295.7 | protein_coding | 4/5 | INFO_REALIGN_3_PRIME | chr21 | TogoVar | |||||
CHODL_chr21_18239833_18272370 | 18262032 | TTAA | T | intron_variant | MODIFIER | HG00741.hp2 HG01243.hp2 HG02717.hp2 others(1): Show |
a0001 | a0001c0001 | a0001c0001t0012a0001c0001t0014a0001c0001t0026 | a0001c0001t0012g0248a0001c0001t0014g0304a0001c0001t0014g0305others(1): Show | 4 | 402 | 0.0100 | -3 | c.635 others(18): Show |
CHODL | ENSG00000154645.14 | transcript | ENST00000299295.7 | protein_coding | 4/5 | INFO_REALIGN_3_PRIME | chr21 | TogoVar | |||||
CHODL_chr21_18239833_18272370 | 18264601 | CAAA | C | intron_variant | MODIFIER | HG02280.hp1 HG02451.hp2 HG02622.hp1 others(6): Show |
a0001 | a0001c0001 | a0001c0001t0007a0001c0001t0020a0001c0001t0025others(1): Show | a0001c0001t0007g0023a0001c0001t0007g0049a0001c0001t0007g0050others(5): Show | 9 | 402 | 0.0224 | -3 | c.738 others(20): Show |
CHODL | ENSG00000154645.14 | transcript | ENST00000299295.7 | protein_coding | 5/5 | INFO_REALIGN_3_PRIME | chr21 | TogoVar | |||||
CHODL_chr21_18239833_18272370 | 18267880 | GCAA | G | downstream_gene_variant | MODIFIER | HG00280.hp2 HG00597.hp1 HG00597.hp2 others(100): Show |
a0001 | a0001c0001a0001c0002 | a0001c0001t0001a0001c0001t0002a0001c0001t0003others(22): Show | a0001c0001t0001g0102a0001c0001t0002g0005a0001c0001t0002g0013others(78): Show | 103 | 402 | 0.2562 | -3 | c.*18 others(14): Show |
CHODL | ENSG00000154645.14 | transcript | ENST00000299295.7 | protein_coding | 511 | chr21 | TogoVar | ||||||
CHODL_chr21_18239833_18272370 | 18268422 | GGAA | G | downstream_gene_variant | MODIFIER | HG00280.hp2 HG00597.hp1 HG00597.hp2 others(100): Show |
a0001 | a0001c0001a0001c0002 | a0001c0001t0001a0001c0001t0002a0001c0001t0003others(23): Show | a0001c0001t0001g0102a0001c0001t0002g0005a0001c0001t0002g0013others(79): Show | 103 | 402 | 0.2562 | -3 | c.*23 others(14): Show |
CHODL | ENSG00000154645.14 | transcript | ENST00000299295.7 | protein_coding | 1053 | chr21 | TogoVar |