regionname | pos | ref | alt | annotation | impact | samples | ahapids | achapids | acthapids | actghapids | ac | an | af | len | hgvs_c | hgvs_p | genename | geneid | featuretype | featureid | transcript_biotype | rank | cdna cdna pos length
|
cds cds pos length
|
aa aa pos length
|
distance | status | chr | external |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
CHODL_chr21_18239833_18272370 | 18268956 | AAAT | A | downstream_gene_variant | MODIFIER | HG00280.hp2 HG00597.hp1 HG00597.hp2 others(64): Show |
a0001 | a0001c0001a0001c0002 | a0001c0001t0001a0001c0001t0002a0001c0001t0004others(7): Show | a0001c0001t0001g0077a0001c0001t0001g0102a0001c0001t0002g0005others(45): Show | 67 | 402 | 0.1667 | -3 | c.*29 others(14): Show |
CHODL | ENSG00000154645.14 | transcript | ENST00000299295.7 | protein_coding | 1587 | chr21 | TogoVar | ||||||
CHODL_chr21_18239833_18272370 | 18271978 | TTGA | T | downstream_gene_variant | MODIFIER | HG00639.hp1 HG00741.hp2 HG01192.hp2 others(8): Show |
a0001 | a0001c0001a0001c0002 | a0001c0001t0006a0001c0001t0014a0001c0001t0020others(4): Show | a0001c0001t0006g0141a0001c0001t0014g0304a0001c0001t0014g0305others(5): Show | 11 | 402 | 0.0274 | -3 | c.*59 others(14): Show |
CHODL | ENSG00000154645.14 | transcript | ENST00000299295.7 | protein_coding | 4609 | chr21 | TogoVar | ||||||
CHORDC1_chr11_90195429_90228049 | 90205098 | GGTC | G | intron_variant | MODIFIER | HG00544.hp2 HG00639.hp2 HG00642.hp1 others(41): Show |
a0001 | a0001c0001 | a0001c0001t0004a0001c0001t0010a0001c0001t0021 | a0001c0001t0004g0003a0001c0001t0004g0015a0001c0001t0004g0034others(19): Show | 44 | 412 | 0.1068 | -3 | c.669 others(18): Show |
CHORDC1 | ENSG00000110172.12 | transcript | ENST00000320585.11 | protein_coding | 8/10 | chr11 | TogoVar | ||||||
CHORDC1_chr11_90195429_90228049 | 90213334 | CAAA | C | intron_variant | MODIFIER | HG00408.hp2 HG00423.hp2 HG00544.hp2 others(111): Show |
a0001 | a0001c0001 | a0001c0001t0002a0001c0001t0004a0001c0001t0007others(5): Show | a0001c0001t0002g0006a0001c0001t0002g0009a0001c0001t0002g0010others(54): Show | 114 | 412 | 0.2767 | -3 | c.329 others(18): Show |
CHORDC1 | ENSG00000110172.12 | transcript | ENST00000320585.11 | protein_coding | 4/10 | chr11 | TogoVar | ||||||
CHORDC1_chr11_90195429_90228049 | 90217895 | CAAA | C | intron_variant | MODIFIER | HG00099.hp1 HG00140.hp1 HG00323.hp2 others(152): Show |
a0001 | a0001c0001 | a0001c0001t0002a0001c0001t0003a0001c0001t0004others(6): Show | a0001c0001t0002g0006a0001c0001t0002g0009a0001c0001t0002g0010others(74): Show | 155 | 412 | 0.3762 | -3 | c.114 others(18): Show |
CHORDC1 | ENSG00000110172.12 | transcript | ENST00000320585.11 | protein_coding | 2/10 | chr11 | TogoVar | ||||||
CHP1_chr15_41226268_41286887 | 41238710 | ATGG | A | intron_variant | MODIFIER | HG00099.hp1 HG00099.hp2 HG00323.hp1 others(177): Show |
a0001 | a0001c0001 | a0001c0001t0001a0001c0001t0002a0001c0001t0003others(26): Show | a0001c0001t0001g0002a0001c0001t0001g0018a0001c0001t0001g0025others(175): Show | 180 | 298 | 0.6040 | -3 | c.68- others(18): Show |
CHP1 | ENSG00000187446.12 | transcript | ENST00000334660.10 | protein_coding | 1/6 | INFO_REALIGN_3_PRIME | chr15 | TogoVar | |||||
CHP1_chr15_41226268_41286887 | 41249462 | CTTT | C | intron_variant | MODIFIER | HG00099.hp1 HG00323.hp1 HG00639.hp1 others(44): Show |
a0001 | a0001c0001 | a0001c0001t0001a0001c0001t0002a0001c0001t0003others(9): Show | a0001c0001t0001g0018a0001c0001t0001g0025a0001c0001t0001g0056others(44): Show | 47 | 298 | 0.1577 | -3 | c.140 others(20): Show |
CHP1 | ENSG00000187446.12 | transcript | ENST00000334660.10 | protein_coding | 2/6 | INFO_REALIGN_3_PRIME | chr15 | TogoVar | |||||
CHP1_chr15_41226268_41286887 | 41265363 | CAAA | C | intron_variant | MODIFIER | HG00099.hp2 HG00323.hp1 HG00558.hp2 others(83): Show |
a0001 | a0001c0001 | a0001c0001t0001a0001c0001t0002a0001c0001t0003others(15): Show | a0001c0001t0001g0002a0001c0001t0001g0025a0001c0001t0001g0178others(81): Show | 86 | 298 | 0.2886 | -3 | c.349 others(20): Show |
CHP1 | ENSG00000187446.12 | transcript | ENST00000334660.10 | protein_coding | 4/6 | INFO_REALIGN_3_PRIME | chr15 | TogoVar | |||||
CHP1_chr15_41226268_41286887 | 41273699 | AAAG | A | intron_variant | MODIFIER | HG01884.hp2 HG02055.hp1 HG02451.hp1 others(4): Show |
a0001 | a0001c0001 | a0001c0001t0001a0001c0001t0003a0001c0001t0004others(1): Show | a0001c0001t0001g0025a0001c0001t0003g0263a0001c0001t0004g0250others(4): Show | 7 | 298 | 0.0235 | -3 | c.411 others(20): Show |
CHP1 | ENSG00000187446.12 | transcript | ENST00000334660.10 | protein_coding | 5/6 | INFO_REALIGN_3_PRIME | chr15 | TogoVar | |||||
CHP2_chr16_23750026_23763935 | 23760344 | AAAC | A | downstream_gene_variant | MODIFIER | HG00140.hp1 HG00140.hp2 HG00323.hp1 others(57): Show |
a0001a0003 | a0001c0001a0003c0003 | a0001c0001t0001a0001c0001t0003a0001c0001t0005others(2): Show | a0001c0001t0001g0002a0001c0001t0001g0003a0001c0001t0001g0010others(8): Show | 60 | 392 | 0.1531 | -3 | c.*27 others(14): Show |
CHP2 | ENSG00000166869.3 | transcript | ENST00000300113.3 | protein_coding | 1410 | chr16 | TogoVar | ||||||
CHPF2_chr7_151227483_151243822 | 151234428 | CCTT | C | intron_variant | MODIFIER | HG02109.hp2 HG02258.hp1 HG02572.hp2 others(4): Show |
a0001 | a0001c0001 | a0001c0001t0004a0001c0001t0012 | a0001c0001t0004g0007a0001c0001t0012g0007 | 7 | 382 | 0.0183 | -3 | c.263 others(18): Show |
CHPF2 | ENSG00000033100.17 | transcript | ENST00000035307.7 | protein_coding | 1/3 | INFO_REALIGN_3_PRIME | chr7 | TogoVar | |||||
CHPF_chr2_219533954_219548809 | 219534031 | CAAA | C | downstream_gene_variant | MODIFIER | HG02109.hp1 HG02145.hp1 HG02280.hp2 others(11): Show |
a0001 | a0001c0001a0001c0006 | a0001c0001t0001a0001c0006t0001 | a0001c0001t0001g0004a0001c0006t0001g0010 | 14 | 396 | 0.0354 | -3 | c.*53 others(14): Show |
CHPF | ENSG00000123989.15 | transcript | ENST00000243776.11 | protein_coding | 4922 | chr2 | TogoVar | ||||||
CHPT1_chr12_101692640_101734074 | 101694694 | CTGT | C | upstream_gene_variant | MODIFIER | HG02258.hp1 HG02451.hp2 HG02572.hp2 others(3): Show |
a0001 | a0001c0001 | a0001c0001t0001 | a0001c0001t0001g0060a0001c0001t0001g0061a0001c0001t0001g0062others(3): Show | 6 | 402 | 0.0149 | -3 | c.-31 others(14): Show |
CHPT1 | ENSG00000111666.11 | transcript | ENST00000229266.8 | protein_coding | 2945 | chr12 | TogoVar | ||||||
CHPT1_chr12_101692640_101734074 | 101722707 | TAAA | T | intron_variant | MODIFIER | HG00408.hp2 HG00423.hp1 HG00609.hp1 others(132): Show |
a0001a0002 | a0001c0001a0002c0002 | a0001c0001t0001a0001c0001t0002a0001c0001t0003others(4): Show | a0001c0001t0001g0024a0001c0001t0001g0025a0001c0001t0001g0026others(82): Show | 135 | 402 | 0.3358 | -3 | c.781 others(18): Show |
CHPT1 | ENSG00000111666.11 | transcript | ENST00000229266.8 | protein_coding | 5/8 | INFO_REALIGN_3_PRIME | chr12 | TogoVar | |||||
CHPT1_chr12_101692640_101734074 | 101727496 | CAAA | C | intron_variant | MODIFIER | HG00323.hp1 HG00408.hp2 HG00423.hp1 others(173): Show |
a0001a0002a0005 | a0001c0001a0002c0002a0005c0008 | a0001c0001t0001a0001c0001t0002a0001c0001t0003others(6): Show | a0001c0001t0001g0008a0001c0001t0001g0024a0001c0001t0001g0025others(115): Show | 176 | 402 | 0.4378 | -3 | c.117 others(22): Show |
CHPT1 | ENSG00000111666.11 | transcript | ENST00000229266.8 | protein_coding | 8/8 | INFO_REALIGN_3_PRIME | chr12 | TogoVar | |||||
CHPT1_chr12_101692640_101734074 | 101728352 | CATT | C | intron_variant | MODIFIER | HG00609.hp1 HG00621.hp1 HG01496.hp2 others(23): Show |
a0001 | a0001c0001 | a0001c0001t0001a0001c0001t0003 | a0001c0001t0001g0026a0001c0001t0001g0032a0001c0001t0001g0033others(17): Show | 26 | 402 | 0.0647 | -3 | c.117 others(20): Show |
CHPT1 | ENSG00000111666.11 | transcript | ENST00000229266.8 | protein_coding | 8/8 | INFO_REALIGN_3_PRIME | chr12 | TogoVar | |||||
CHRAC1_chr8_140506322_140522154 | 140519851 | CTGA | C | downstream_gene_variant | MODIFIER | HG00099.hp2 HG00408.hp1 HG00438.hp1 others(82): Show |
a0001a0002a0003others(1): Show | a0001c0001a0002c0002a0003c0003others(1): Show | a0001c0001t0001a0001c0001t0002a0001c0001t0003others(11): Show | a0001c0001t0001g0001a0001c0001t0001g0002a0001c0001t0001g0004others(17): Show | 85 | 424 | 0.2005 | -3 | c.*46 others(14): Show |
CHRAC1 | ENSG00000104472.10 | transcript | ENST00000220913.10 | protein_coding | 2698 | chr8 | TogoVar | ||||||
CHRDL1_chrX_110668856_110800817 | 110674189 | TAAC | T | 3_prime_UTR_variant | MODIFIER | NA18982.hp1 NA19012.hp1 NA19086.hp1 |
a0001 | a0001c0001 | a0001c0001t0017a0001c0001t0032 | a0001c0001t0017g0048a0001c0001t0017g0118a0001c0001t0032g0119 | 3 | 172 | 0.0174 | -3 | c.*20 others(14): Show |
CHRDL1 | ENSG00000101938.15 | transcript | ENST00000372042.6 | protein_coding | 12/12 | 2039 | chrX | TogoVar | |||||
CHRDL1_chrX_110668856_110800817 | 110674502 | CACA | C | 3_prime_UTR_variant | MODIFIER | NA18995.hp1 | a0001 | a0001c0001 | a0001c0001t0028 | a0001c0001t0028g0091 | 1 | 172 | 0.0058 | -3 | c.*17 others(14): Show |
CHRDL1 | ENSG00000101938.15 | transcript | ENST00000372042.6 | protein_coding | 12/12 | 1726 | chrX | TogoVar | |||||
CHRDL1_chrX_110668856_110800817 | 110689254 | CTTT | C | intron_variant | MODIFIER | HG00099.hp1 HG00099.hp2 HG00140.hp1 others(164): Show |
a0001a0002a0003 | a0001c0001a0001c0002a0001c0006others(2): Show | a0001c0001t0001a0001c0001t0002a0001c0001t0005others(50): Show | a0001c0001t0001g0002a0001c0001t0001g0025a0001c0001t0001g0026others(163): Show | 167 | 172 | 0.9709 | -3 | c.779 others(18): Show |
CHRDL1 | ENSG00000101938.15 | transcript | ENST00000372042.6 | protein_coding | 8/11 | chrX | TogoVar | ||||||
CHRDL1_chrX_110668856_110800817 | 110689653 | TATC | T | intron_variant | MODIFIER | HG01109.hp1 HG01167.hp1 HG01243.hp1 others(8): Show |
a0001 | a0001c0002a0001c0006 | a0001c0002t0004a0001c0002t0007a0001c0002t0008others(5): Show | a0001c0002t0004g0051a0001c0002t0007g0052a0001c0002t0008g0010others(8): Show | 11 | 172 | 0.0640 | -3 | c.779 others(18): Show |
CHRDL1 | ENSG00000101938.15 | transcript | ENST00000372042.6 | protein_coding | 8/11 | chrX | TogoVar | ||||||
CHRDL1_chrX_110668856_110800817 | 110705478 | ATAC | A | intron_variant | MODIFIER | HG02630.hp1 HG02886.hp2 |
a0001 | a0001c0002 | a0001c0002t0004a0001c0002t0011 | a0001c0002t0004g0043a0001c0002t0011g0042 | 2 | 172 | 0.0116 | -3 | c.542 others(20): Show |
CHRDL1 | ENSG00000101938.15 | transcript | ENST00000372042.6 | protein_coding | 6/11 | chrX | TogoVar | ||||||
CHRDL1_chrX_110668856_110800817 | 110773723 | CAAA | C | intron_variant | MODIFIER | HG02965.hp1 HG03471.hp1 HG03540.hp1 |
a0001 | a0001c0001a0001c0002 | a0001c0001t0046a0001c0002t0003a0001c0002t0007 | a0001c0001t0046g0170a0001c0002t0003g0169a0001c0002t0007g0165 | 3 | 172 | 0.0174 | -3 | c.95- others(20): Show |
CHRDL1 | ENSG00000101938.15 | transcript | ENST00000372042.6 | protein_coding | 2/11 | chrX | TogoVar | ||||||
CHRDL1_chrX_110668856_110800817 | 110780076 | ATTG | A | intron_variant | MODIFIER | HG00140.hp1 | a0001 | a0001c0002 | a0001c0002t0004 | a0001c0002t0004g0157 | 1 | 172 | 0.0058 | -3 | c.94+ others(20): Show |
CHRDL1 | ENSG00000101938.15 | transcript | ENST00000372042.6 | protein_coding | 2/11 | chrX | TogoVar | ||||||
CHRDL1_chrX_110668856_110800817 | 110787640 | TATC | T | intron_variant | MODIFIER | NA18952.hp1 | a0001 | a0001c0001 | a0001c0001t0002 | a0001c0001t0002g0034 | 1 | 172 | 0.0058 | -3 | c.94+ others(18): Show |
CHRDL1 | ENSG00000101938.15 | transcript | ENST00000372042.6 | protein_coding | 2/11 | chrX | TogoVar | ||||||
CHRDL2_chr11_74691429_74736426 | 74695096 | TAAA | T | downstream_gene_variant | MODIFIER | HG01243.hp1 HG02145.hp1 HG02257.hp1 others(16): Show |
a0001a0003 | a0001c0002a0001c0003a0001c0004others(4): Show | a0001c0002t0001a0001c0002t0003a0001c0003t0001others(7): Show | a0001c0002t0001g0200a0001c0002t0001g0213a0001c0002t0003g0236others(14): Show | 19 | 392 | 0.0485 | -3 | c.*14 others(14): Show |
CHRDL2 | ENSG00000054938.17 | transcript | ENST00000376332.8 | protein_coding | 1332 | chr11 | TogoVar | ||||||
CHRDL2_chr11_74691429_74736426 | 74695502 | TTTA | T | downstream_gene_variant | MODIFIER | HG02970.hp1 HG03540.hp2 NA19030.hp1 |
a0001 | a0001c0003a0001c0004 | a0001c0003t0001a0001c0004t0002 | a0001c0003t0001g0110a0001c0004t0002g0257a0001c0004t0002g0259 | 3 | 392 | 0.0077 | -3 | c.*10 others(14): Show |
CHRDL2 | ENSG00000054938.17 | transcript | ENST00000376332.8 | protein_coding | 926 | chr11 | TogoVar | ||||||
CHRDL2_chr11_74691429_74736426 | 74720502 | CCTT | C | intron_variant | MODIFIER | HG02257.hp1 HG02280.hp1 HG02559.hp1 others(3): Show |
a0001a0003 | a0001c0002a0003c0008 | a0001c0002t0001a0003c0008t0001 | a0001c0002t0001g0200a0003c0008t0001g0203a0003c0008t0001g0204others(3): Show | 6 | 392 | 0.0153 | -3 | c.83- others(18): Show |
CHRDL2 | ENSG00000054938.17 | transcript | ENST00000376332.8 | protein_coding | 1/10 | chr11 | TogoVar | ||||||
CHRDL2_chr11_74691429_74736426 | 74720602 | CCTT | C | intron_variant | MODIFIER | HG00099.hp1 HG00280.hp1 HG00408.hp1 others(132): Show |
a0001a0002a0005others(2): Show | a0001c0001a0001c0002a0001c0003others(11): Show | a0001c0001t0001a0001c0001t0002a0001c0001t0006others(17): Show | a0001c0001t0001g0015a0001c0001t0001g0042a0001c0001t0001g0099others(114): Show | 135 | 392 | 0.3444 | -3 | c.83- others(18): Show |
CHRDL2 | ENSG00000054938.17 | transcript | ENST00000376332.8 | protein_coding | 1/10 | chr11 | TogoVar | ||||||
CHRDL2_chr11_74691429_74736426 | 74728528 | TTTG | T | intron_variant | MODIFIER | HG00323.hp1 HG00323.hp2 HG00408.hp2 others(163): Show |
a0001a0002a0003 | a0001c0001a0001c0002a0001c0003others(12): Show | a0001c0001t0001a0001c0001t0002a0001c0002t0001others(17): Show | a0001c0001t0001g0042a0001c0001t0001g0146a0001c0001t0001g0152others(149): Show | 166 | 392 | 0.4235 | -3 | c.82+ others(18): Show |
CHRDL2 | ENSG00000054938.17 | transcript | ENST00000376332.8 | protein_coding | 1/10 | chr11 | TogoVar | ||||||
CHRD_chr3_184375054_184394829 | 184376855 | AAAG | A | upstream_gene_variant | MODIFIER | HG00741.hp2 HG01070.hp2 HG01106.hp2 others(44): Show |
a0001a0002 | a0001c0001a0001c0008a0001c0015others(4): Show | a0001c0001t0001a0001c0008t0001a0001c0015t0001others(4): Show | a0001c0001t0001g0001a0001c0001t0001g0031a0001c0001t0001g0039others(25): Show | 47 | 428 | 0.1098 | -3 | c.-34 others(14): Show |
CHRD | ENSG00000090539.16 | transcript | ENST00000204604.6 | protein_coding | 3198 | chr3 | TogoVar | ||||||
CHRD_chr3_184375054_184394829 | 184385666 | CAAA | C | intron_variant | MODIFIER | HG00423.hp1 HG00423.hp2 HG00741.hp2 others(60): Show |
a0001a0002a0004 | a0001c0001a0001c0017a0002c0002others(8): Show | a0001c0001t0001a0001c0017t0001a0002c0002t0001others(11): Show | a0001c0001t0001g0104a0001c0017t0001g0060a0002c0002t0001g0003others(24): Show | 63 | 428 | 0.1472 | -3 | c.181 others(20): Show |
CHRD | ENSG00000090539.16 | transcript | ENST00000204604.6 | protein_coding | 14/22 | INFO_REALIGN_3_PRIME | chr3 | TogoVar | |||||
CHRD_chr3_184375054_184394829 | 184391996 | TGTA | T | downstream_gene_variant | MODIFIER | HG00423.hp1 HG00423.hp2 HG00438.hp2 others(62): Show |
a0001a0002 | a0001c0003a0002c0002a0002c0004others(3): Show | a0001c0003t0001a0002c0002t0001a0002c0002t0003others(4): Show | a0001c0003t0001g0009a0001c0003t0001g0175a0002c0002t0001g0003others(22): Show | 65 | 428 | 0.1519 | -3 | c.*25 others(14): Show |
CHRD | ENSG00000090539.16 | transcript | ENST00000204604.6 | protein_coding | 2168 | chr3 | TogoVar | ||||||
CHRFAM7A_chr15_30355566_30398540 | 30361700 | CTTT | C | 3_prime_UTR_variant | MODIFIER | HG02572.hp2 HG02735.hp2 HG02895.hp2 others(5): Show |
a0002 | a0002c0006a0002c0008a0002c0010others(2): Show | a0002c0006t0032a0002c0008t0010a0002c0010t0010others(2): Show | a0002c0006t0032g0109a0002c0008t0010g0119a0002c0008t0010g0120others(5): Show | 8 | 133 | 0.0602 | -3 | c.*59 others(12): Show |
CHRFAM7A | ENSG00000166664.15 | transcript | ENST00000299847.7 | protein_coding | 10/10 | 590 | chr15 | TogoVar | |||||
CHRFAM7A_chr15_30355566_30398540 | 30379813 | CATT | C | intron_variant | MODIFIER | HG00140.hp1 HG00280.hp1 HG00738.hp1 others(10): Show |
a0002a0003 | a0002c0010a0003c0003a0003c0019others(1): Show | a0002c0010t0021a0003c0003t0002a0003c0003t0019others(4): Show | a0002c0010t0021g0016a0003c0003t0002g0006a0003c0003t0002g0008others(10): Show | 13 | 133 | 0.0977 | -3 | c.80+ others(16): Show |
CHRFAM7A | ENSG00000166664.15 | transcript | ENST00000299847.7 | protein_coding | 4/9 | chr15 | TogoVar | ||||||
CHRFAM7A_chr15_30355566_30398540 | 30389426 | ATTT | A | intron_variant | MODIFIER | HG02647.hp2 HG02897.hp2 HG03041.hp2 others(3): Show |
a0002a0008 | a0002c0002a0002c0008a0002c0015others(1): Show | a0002c0002t0004a0002c0008t0017a0002c0015t0012others(1): Show | a0002c0002t0004g0062a0002c0002t0004g0063a0002c0008t0017g0126others(3): Show | 6 | 133 | 0.0451 | -3 | c.-15 others(22): Show |
CHRFAM7A | ENSG00000166664.15 | transcript | ENST00000299847.7 | protein_coding | 1/9 | chr15 | TogoVar | ||||||
CHRFAM7A_chr15_30355566_30398540 | 30394440 | AAAG | A | upstream_gene_variant | MODIFIER | HG01993.hp1 HG03490.hp2 |
a0001 | a0001c0001a0001c0007 | a0001c0001t0001a0001c0007t0001 | a0001c0001t0001g0087a0001c0007t0001g0080 | 2 | 133 | 0.0150 | -3 | c.-13 others(14): Show |
CHRFAM7A | ENSG00000166664.15 | transcript | ENST00000299847.7 | protein_coding | 901 | chr15 | TogoVar | ||||||
CHRM2_chr7_136863652_137025213 | 136867609 | TATA | T | upstream_gene_variant | MODIFIER | HG00323.hp1 HG00733.hp2 HG01496.hp1 others(10): Show |
a0001 | a0001c0001 | a0001c0001t0001a0001c0001t0002a0001c0001t0007others(2): Show | a0001c0001t0001g0121a0001c0001t0001g0166a0001c0001t0001g0207others(10): Show | 13 | 320 | 0.0406 | -3 | c.-16 others(14): Show |
CHRM2 | ENSG00000181072.12 | transcript | ENST00000680005.1 | protein_coding | 1042 | chr7 | TogoVar | ||||||
CHRM2_chr7_136863652_137025213 | 136867611 | TATA | T | upstream_gene_variant | MODIFIER | HG00558.hp1 HG00735.hp2 HG00738.hp1 others(21): Show |
a0001 | a0001c0001 | a0001c0001t0001a0001c0001t0002a0001c0001t0005others(7): Show | a0001c0001t0001g0005a0001c0001t0001g0007a0001c0001t0001g0130others(21): Show | 24 | 320 | 0.0750 | -3 | c.-16 others(14): Show |
CHRM2 | ENSG00000181072.12 | transcript | ENST00000680005.1 | protein_coding | 1040 | chr7 | TogoVar | ||||||
CHRM2_chr7_136863652_137025213 | 136867613 | TATA | T | upstream_gene_variant | MODIFIER | HG00099.hp2 HG01074.hp1 HG02723.hp1 others(6): Show |
a0001 | a0001c0001 | a0001c0001t0001a0001c0001t0005a0001c0001t0007others(5): Show | a0001c0001t0001g0008a0001c0001t0001g0312a0001c0001t0005g0294others(6): Show | 9 | 320 | 0.0281 | -3 | c.-16 others(14): Show |
CHRM2 | ENSG00000181072.12 | transcript | ENST00000680005.1 | protein_coding | 1038 | chr7 | TogoVar | ||||||
CHRM2_chr7_136863652_137025213 | 136867614 | ATAT | A | upstream_gene_variant | MODIFIER | HG00733.hp1 HG00741.hp2 HG01258.hp2 others(12): Show |
a0001 | a0001c0001 | a0001c0001t0012a0001c0001t0031a0001c0001t0035others(7): Show | a0001c0001t0012g0055a0001c0001t0012g0060a0001c0001t0012g0061others(12): Show | 15 | 320 | 0.0469 | -3 | c.-16 others(14): Show |
CHRM2 | ENSG00000181072.12 | transcript | ENST00000680005.1 | protein_coding | 1037 | chr7 | TogoVar | ||||||
CHRM2_chr7_136863652_137025213 | 136906240 | ATAT | A | intron_variant | MODIFIER | HG00639.hp1 HG01243.hp1 HG02922.hp1 others(5): Show |
a0001 | a0001c0001a0001c0003 | a0001c0001t0004a0001c0001t0009a0001c0001t0011others(1): Show | a0001c0001t0004g0256a0001c0001t0009g0304a0001c0001t0011g0002others(4): Show | 8 | 320 | 0.0250 | -3 | c.-12 others(24): Show |
CHRM2 | ENSG00000181072.12 | transcript | ENST00000680005.1 | protein_coding | 2/3 | INFO_REALIGN_3_PRIME | chr7 | TogoVar | |||||
CHRM2_chr7_136863652_137025213 | 136939601 | TTAA | T | intron_variant | MODIFIER | HG02818.hp2 HG02922.hp2 NA18522.hp2 |
a0001 | a0001c0001 | a0001c0001t0031a0001c0001t0078a0001c0001t0080 | a0001c0001t0031g0096a0001c0001t0078g0095a0001c0001t0080g0097 | 3 | 320 | 0.0094 | -3 | c.-12 others(24): Show |
CHRM2 | ENSG00000181072.12 | transcript | ENST00000680005.1 | protein_coding | 2/3 | INFO_REALIGN_3_PRIME | chr7 | TogoVar | |||||
CHRM2_chr7_136863652_137025213 | 136950783 | CTGT | C | intron_variant | MODIFIER | HG01168.hp2 HG01258.hp2 HG03098.hp2 others(3): Show |
a0001 | a0001c0001a0001c0002 | a0001c0001t0001a0001c0001t0002a0001c0001t0012others(3): Show | a0001c0001t0001g0190a0001c0001t0002g0161a0001c0001t0012g0055others(3): Show | 6 | 320 | 0.0188 | -3 | c.-12 others(24): Show |
CHRM2 | ENSG00000181072.12 | transcript | ENST00000680005.1 | protein_coding | 2/3 | INFO_REALIGN_3_PRIME | chr7 | TogoVar | |||||
CHRM2_chr7_136863652_137025213 | 136958448 | CTTT | C | intron_variant | MODIFIER | HG00639.hp2 HG01070.hp2 HG01099.hp2 others(14): Show |
a0001 | a0001c0001 | a0001c0001t0002a0001c0001t0003a0001c0001t0005others(9): Show | a0001c0001t0002g0174a0001c0001t0003g0222a0001c0001t0005g0021others(13): Show | 17 | 320 | 0.0531 | -3 | c.-12 others(24): Show |
CHRM2 | ENSG00000181072.12 | transcript | ENST00000680005.1 | protein_coding | 2/3 | INFO_REALIGN_3_PRIME | chr7 | TogoVar | |||||
CHRM2_chr7_136863652_137025213 | 136973099 | GTGA | G | intron_variant | MODIFIER | HG00639.hp2 HG01358.hp1 HG03834.hp2 others(1): Show |
a0001 | a0001c0001 | a0001c0001t0005a0001c0001t0020a0001c0001t0027 | a0001c0001t0005g0021a0001c0001t0020g0099a0001c0001t0020g0100others(1): Show | 4 | 320 | 0.0125 | -3 | c.-12 others(24): Show |
CHRM2 | ENSG00000181072.12 | transcript | ENST00000680005.1 | protein_coding | 2/3 | INFO_REALIGN_3_PRIME | chr7 | TogoVar | |||||
CHRM2_chr7_136863652_137025213 | 136973256 | GTGA | G | intron_variant | MODIFIER | HG03486.hp2 NA18939.hp2 NA19066.hp2 |
a0001 | a0001c0001a0001c0002 | a0001c0001t0004a0001c0002t0001a0001c0002t0005 | a0001c0001t0004g0256a0001c0002t0001g0027a0001c0002t0005g0030 | 3 | 320 | 0.0094 | -3 | c.-12 others(24): Show |
CHRM2 | ENSG00000181072.12 | transcript | ENST00000680005.1 | protein_coding | 2/3 | INFO_REALIGN_3_PRIME | chr7 | TogoVar | |||||
CHRM2_chr7_136863652_137025213 | 136973359 | TGAC | T | intron_variant | MODIFIER | HG02895.hp2 HG03139.hp2 HG03579.hp1 others(2): Show |
a0001 | a0001c0001 | a0001c0001t0013a0001c0001t0014a0001c0001t0023 | a0001c0001t0013g0068a0001c0001t0013g0070a0001c0001t0013g0247others(2): Show | 5 | 320 | 0.0156 | -3 | c.-12 others(24): Show |
CHRM2 | ENSG00000181072.12 | transcript | ENST00000680005.1 | protein_coding | 2/3 | INFO_REALIGN_3_PRIME | chr7 | TogoVar | |||||
CHRM2_chr7_136863652_137025213 | 136973695 | GTAA | G | intron_variant | MODIFIER | HG00639.hp1 HG02895.hp2 HG02922.hp1 others(9): Show |
a0001 | a0001c0001 | a0001c0001t0011a0001c0001t0013a0001c0001t0014others(2): Show | a0001c0001t0011g0002a0001c0001t0011g0209a0001c0001t0011g0210others(8): Show | 12 | 320 | 0.0375 | -3 | c.-12 others(24): Show |
CHRM2 | ENSG00000181072.12 | transcript | ENST00000680005.1 | protein_coding | 2/3 | INFO_REALIGN_3_PRIME | chr7 | TogoVar | |||||
CHRM2_chr7_136863652_137025213 | 136995082 | AAAT | A | intron_variant | MODIFIER | HG02055.hp2 HG02809.hp1 HG02818.hp1 others(2): Show |
a0001a0004a0005 | a0001c0001a0004c0009a0005c0008 | a0001c0001t0005a0001c0001t0025a0001c0001t0055others(2): Show | a0001c0001t0005g0135a0001c0001t0025g0123a0001c0001t0055g0261others(2): Show | 5 | 320 | 0.0156 | -3 | c.-47 others(20): Show |
CHRM2 | ENSG00000181072.12 | transcript | ENST00000680005.1 | protein_coding | 3/3 | INFO_REALIGN_3_PRIME | chr7 | TogoVar |