regionname | pos | ref | alt | annotation | impact | samples | ahapids | achapids | acthapids | actghapids | ac | an | af | len | hgvs_c | hgvs_p | genename | geneid | featuretype | featureid | transcript_biotype | rank | cdna cdna pos length
|
cds cds pos length
|
aa aa pos length
|
distance | status | chr | external |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
CHRNA3_chr15_78590309_78625996 | 78624364 | AGAG | A | upstream_gene_variant | MODIFIER | HG01109.hp1 HG02145.hp2 HG02257.hp1 others(2): Show |
a0002 | a0002c0002 | a0002c0002t0002 | a0002c0002t0002g0023a0002c0002t0002g0024a0002c0002t0002g0066 | 5 | 410 | 0.0122 | -3 | c.-35 others(14): Show |
CHRNA3 | ENSG00000080644.16 | transcript | ENST00000326828.6 | protein_coding | 3369 | chr15 | TogoVar | ||||||
CHRNA5_chr15_78560520_78600269 | 78563331 | GAAA | G | upstream_gene_variant | MODIFIER | HG00099.hp2 HG00423.hp1 HG00558.hp1 others(141): Show |
a0001a0002a0005 | a0001c0001a0001c0007a0002c0002others(1): Show | a0001c0001t0001a0001c0001t0006a0001c0001t0010others(9): Show | a0001c0001t0001g0005a0001c0001t0001g0007a0001c0001t0001g0012others(126): Show | 144 | 382 | 0.3770 | -3 | c.-23 others(14): Show |
CHRNA5 | ENSG00000169684.13 | transcript | ENST00000299565.9 | protein_coding | 2188 | chr15 | TogoVar | ||||||
CHRNA5_chr15_78560520_78600269 | 78564045 | CTCT | C | upstream_gene_variant | MODIFIER | HG00408.hp1 HG00597.hp1 HG00733.hp2 others(15): Show |
a0001 | a0001c0001 | a0001c0001t0002a0001c0001t0007a0001c0001t0012others(3): Show | a0001c0001t0002g0069a0001c0001t0007g0009a0001c0001t0007g0021others(13): Show | 18 | 382 | 0.0471 | -3 | c.-16 others(14): Show |
CHRNA5 | ENSG00000169684.13 | transcript | ENST00000299565.9 | protein_coding | 1474 | chr15 | TogoVar | ||||||
CHRNA5_chr15_78560520_78600269 | 78568952 | TCTC | T | intron_variant | MODIFIER | HG01243.hp1 HG01346.hp1 HG02055.hp1 others(14): Show |
a0001 | a0001c0001 | a0001c0001t0005 | a0001c0001t0005g0001a0001c0001t0005g0034a0001c0001t0005g0211others(6): Show | 17 | 382 | 0.0445 | -3 | c.106 others(20): Show |
CHRNA5 | ENSG00000169684.13 | transcript | ENST00000299565.9 | protein_coding | 1/5 | chr15 | TogoVar | ||||||
CHRNA5_chr15_78560520_78600269 | 78577926 | CAAA | C | intron_variant | MODIFIER | HG01243.hp1 HG01346.hp1 HG02055.hp1 others(14): Show |
a0001 | a0001c0001 | a0001c0001t0005 | a0001c0001t0005g0001a0001c0001t0005g0034a0001c0001t0005g0211others(6): Show | 17 | 382 | 0.0445 | -3 | c.107 others(20): Show |
CHRNA5 | ENSG00000169684.13 | transcript | ENST00000299565.9 | protein_coding | 1/5 | INFO_REALIGN_3_PRIME | chr15 | TogoVar | |||||
CHRNA5_chr15_78560520_78600269 | 78592784 | GAAT | G | intron_variant | MODIFIER | HG00408.hp1 HG00597.hp1 HG01243.hp1 others(28): Show |
a0001 | a0001c0001 | a0001c0001t0005a0001c0001t0007a0001c0001t0015others(2): Show | a0001c0001t0005g0001a0001c0001t0005g0034a0001c0001t0005g0211others(18): Show | 31 | 382 | 0.0812 | -3 | c.124 others(20): Show |
CHRNA5 | ENSG00000169684.13 | transcript | ENST00000299565.9 | protein_coding | 5/5 | INFO_REALIGN_3_PRIME | chr15 | TogoVar | |||||
CHRNA5_chr15_78560520_78600269 | 78593881 | AAAT | A | 3_prime_UTR_variant | MODIFIER | HG01243.hp1 HG01346.hp1 HG02055.hp1 others(14): Show |
a0001 | a0001c0001 | a0001c0001t0005 | a0001c0001t0005g0001a0001c0001t0005g0034a0001c0001t0005g0211others(6): Show | 17 | 382 | 0.0445 | -3 | c.*63 others(12): Show |
CHRNA5 | ENSG00000169684.13 | transcript | ENST00000299565.9 | protein_coding | 6/6 | 630 | INFO_REALIGN_3_PRIME | chr15 | TogoVar | ||||
CHRNA5_chr15_78560520_78600269 | 78600016 | CAAA | C | downstream_gene_variant | MODIFIER | HG01891.hp1 HG02055.hp2 HG02486.hp1 others(11): Show |
a0001 | a0001c0001a0001c0004 | a0001c0001t0009a0001c0001t0032a0001c0004t0008 | a0001c0001t0009g0042a0001c0001t0009g0298a0001c0001t0009g0299others(9): Show | 14 | 382 | 0.0367 | -3 | c.*67 others(14): Show |
CHRNA5 | ENSG00000169684.13 | transcript | ENST00000299565.9 | protein_coding | 4748 | chr15 | TogoVar | ||||||
CHRNA6_chr8_42747620_42773786 | 42748205 | TTTC | T | downstream_gene_variant | MODIFIER | HG00099.hp2 HG00280.hp2 HG00423.hp1 others(129): Show |
a0001 | a0001c0001a0001c0008 | a0001c0001t0002a0001c0001t0003a0001c0001t0005others(7): Show | a0001c0001t0002g0003a0001c0001t0002g0007a0001c0001t0002g0008others(57): Show | 132 | 350 | 0.3771 | -3 | c.*49 others(14): Show |
CHRNA6 | ENSG00000147434.9 | transcript | ENST00000276410.7 | protein_coding | 4414 | chr8 | TogoVar | ||||||
CHRNA7_chr15_32025515_32178018 | 32052197 | ATTT | A | intron_variant | MODIFIER | HG01081.hp1 HG01255.hp1 HG02257.hp2 others(26): Show |
a0001 | a0001c0001a0001c0002a0001c0004others(4): Show | a0001c0001t0008a0001c0001t0013a0001c0001t0015others(19): Show | a0001c0001t0008g0038a0001c0001t0013g0204a0001c0001t0013g0205others(25): Show | 29 | 307 | 0.0945 | -3 | c.195 others(22): Show |
CHRNA7 | ENSG00000175344.19 | transcript | ENST00000306901.9 | protein_coding | 2/9 | INFO_REALIGN_3_PRIME | chr15 | TogoVar | |||||
CHRNA7_chr15_32025515_32178018 | 32059944 | CAAA | C | intron_variant | MODIFIER | HG01069.hp1 HG01099.hp1 HG01255.hp2 others(14): Show |
a0001 | a0001c0001a0001c0002a0001c0003others(2): Show | a0001c0001t0001a0001c0001t0003a0001c0002t0002others(6): Show | a0001c0001t0001g0092a0001c0001t0001g0095a0001c0001t0003g0089others(14): Show | 17 | 307 | 0.0554 | -3 | c.195 others(22): Show |
CHRNA7 | ENSG00000175344.19 | transcript | ENST00000306901.9 | protein_coding | 2/9 | INFO_REALIGN_3_PRIME | chr15 | TogoVar | |||||
CHRNA7_chr15_32025515_32178018 | 32070669 | CTTT | C | intron_variant | MODIFIER | HG01169.hp2 HG01255.hp1 HG01952.hp2 others(22): Show |
a0001 | a0001c0001a0001c0002a0001c0003others(3): Show | a0001c0001t0001a0001c0001t0008a0001c0001t0015others(13): Show | a0001c0001t0001g0030a0001c0001t0001g0223a0001c0001t0001g0263others(22): Show | 25 | 307 | 0.0814 | -3 | c.196 others(22): Show |
CHRNA7 | ENSG00000175344.19 | transcript | ENST00000306901.9 | protein_coding | 2/9 | INFO_REALIGN_3_PRIME | chr15 | TogoVar | |||||
CHRNA7_chr15_32025515_32178018 | 32074637 | ATAT | A | intron_variant | MODIFIER | HG00099.hp1 HG00099.hp2 HG00323.hp2 others(233): Show |
a0001a0002 | a0001c0001a0001c0002a0001c0003others(9): Show | a0001c0001t0001a0001c0001t0003a0001c0001t0008others(57): Show | a0001c0001t0001g0006a0001c0001t0001g0009a0001c0001t0001g0014others(232): Show | 236 | 307 | 0.7687 | -3 | c.196 others(22): Show |
CHRNA7 | ENSG00000175344.19 | transcript | ENST00000306901.9 | protein_coding | 2/9 | INFO_REALIGN_3_PRIME | chr15 | TogoVar | |||||
CHRNA7_chr15_32025515_32178018 | 32075503 | TTTC | T | intron_variant | MODIFIER | HG01169.hp1 HG02055.hp2 HG03453.hp1 others(2): Show |
a0001 | a0001c0001a0001c0004a0001c0006others(2): Show | a0001c0001t0008a0001c0004t0017a0001c0006t0010others(2): Show | a0001c0001t0008g0118a0001c0004t0017g0122a0001c0006t0010g0121others(2): Show | 5 | 307 | 0.0163 | -3 | c.196 others(22): Show |
CHRNA7 | ENSG00000175344.19 | transcript | ENST00000306901.9 | protein_coding | 2/9 | INFO_REALIGN_3_PRIME | chr15 | TogoVar | |||||
CHRNA7_chr15_32025515_32178018 | 32086367 | CAAA | C | intron_variant | MODIFIER | HG00099.hp2 HG00323.hp1 HG00323.hp2 others(233): Show |
a0001a0002a0003 | a0001c0001a0001c0002a0001c0003others(12): Show | a0001c0001t0001a0001c0001t0003a0001c0001t0008others(62): Show | a0001c0001t0001g0006a0001c0001t0001g0009a0001c0001t0001g0014others(231): Show | 236 | 307 | 0.7687 | -3 | c.196 others(22): Show |
CHRNA7 | ENSG00000175344.19 | transcript | ENST00000306901.9 | protein_coding | 2/9 | INFO_REALIGN_3_PRIME | chr15 | TogoVar | |||||
CHRNA7_chr15_32025515_32178018 | 32102572 | GTAT | G | intron_variant | MODIFIER | HG00099.hp2 HG00323.hp2 HG00408.hp1 others(110): Show |
a0001 | a0001c0001a0001c0002a0001c0003others(4): Show | a0001c0001t0001a0001c0001t0003a0001c0001t0010others(28): Show | a0001c0001t0001g0006a0001c0001t0001g0009a0001c0001t0001g0014others(109): Show | 113 | 307 | 0.3681 | -3 | c.240 others(20): Show |
CHRNA7 | ENSG00000175344.19 | transcript | ENST00000306901.9 | protein_coding | 3/9 | INFO_REALIGN_3_PRIME | chr15 | TogoVar | |||||
CHRNA7_chr15_32025515_32178018 | 32103516 | CATT | C | intron_variant | MODIFIER | HG00099.hp1 HG00438.hp1 HG00438.hp2 others(73): Show |
a0001 | a0001c0001a0001c0002a0001c0003others(4): Show | a0001c0001t0001a0001c0001t0003a0001c0001t0020others(15): Show | a0001c0001t0001g0018a0001c0001t0001g0029a0001c0001t0001g0051others(73): Show | 76 | 307 | 0.2476 | -3 | c.240 others(20): Show |
CHRNA7 | ENSG00000175344.19 | transcript | ENST00000306901.9 | protein_coding | 3/9 | INFO_REALIGN_3_PRIME | chr15 | TogoVar | |||||
CHRNA7_chr15_32025515_32178018 | 32105524 | AGAG | A | intron_variant | MODIFIER | HG02258.hp2 HG02615.hp1 HG02622.hp2 others(3): Show |
a0001 | a0001c0004a0001c0007 | a0001c0004t0010a0001c0004t0039a0001c0004t0052others(1): Show | a0001c0004t0010g0003a0001c0004t0010g0188a0001c0004t0039g0180others(2): Show | 6 | 307 | 0.0195 | -3 | c.240 others(20): Show |
CHRNA7 | ENSG00000175344.19 | transcript | ENST00000306901.9 | protein_coding | 3/9 | INFO_REALIGN_3_PRIME | chr15 | TogoVar | |||||
CHRNA7_chr15_32025515_32178018 | 32131967 | TCTC | T | intron_variant | MODIFIER | HG00323.hp2 HG00408.hp1 HG00438.hp2 others(57): Show |
a0001 | a0001c0001a0001c0002a0001c0003others(5): Show | a0001c0001t0001a0001c0001t0008a0001c0001t0012others(21): Show | a0001c0001t0001g0006a0001c0001t0001g0009a0001c0001t0001g0014others(57): Show | 60 | 307 | 0.1954 | -3 | c.350 others(22): Show |
CHRNA7 | ENSG00000175344.19 | transcript | ENST00000306901.9 | protein_coding | 4/9 | INFO_REALIGN_3_PRIME | chr15 | TogoVar | |||||
CHRNA7_chr15_32025515_32178018 | 32136497 | CAAA | C | intron_variant | MODIFIER | HG01496.hp1 HG02257.hp1 HG02258.hp2 others(28): Show |
a0001a0002 | a0001c0001a0001c0002a0001c0004others(5): Show | a0001c0001t0001a0001c0001t0008a0001c0001t0013others(16): Show | a0001c0001t0001g0082a0001c0001t0001g0085a0001c0001t0001g0212others(27): Show | 31 | 307 | 0.1010 | -3 | c.351 others(22): Show |
CHRNA7 | ENSG00000175344.19 | transcript | ENST00000306901.9 | protein_coding | 4/9 | INFO_REALIGN_3_PRIME | chr15 | TogoVar | |||||
CHRNA7_chr15_32025515_32178018 | 32141854 | TGTC | T | intron_variant | MODIFIER | HG00323.hp2 HG00408.hp1 HG00438.hp2 others(69): Show |
a0001 | a0001c0001a0001c0002a0001c0003others(5): Show | a0001c0001t0001a0001c0001t0003a0001c0001t0008others(24): Show | a0001c0001t0001g0006a0001c0001t0001g0009a0001c0001t0001g0014others(69): Show | 72 | 307 | 0.2345 | -3 | c.351 others(22): Show |
CHRNA7 | ENSG00000175344.19 | transcript | ENST00000306901.9 | protein_coding | 4/9 | INFO_REALIGN_3_PRIME | chr15 | TogoVar | |||||
CHRNA7_chr15_32025515_32178018 | 32153039 | CCTT | C | intron_variant | MODIFIER | HG00621.hp2 HG01255.hp1 HG01346.hp1 others(14): Show |
a0001 | a0001c0001a0001c0002a0001c0006 | a0001c0001t0001a0001c0002t0005a0001c0002t0006others(5): Show | a0001c0001t0001g0286a0001c0002t0005g0013a0001c0002t0005g0111others(14): Show | 17 | 307 | 0.0554 | -3 | c.351 others(18): Show |
CHRNA7 | ENSG00000175344.19 | transcript | ENST00000306901.9 | protein_coding | 4/9 | INFO_REALIGN_3_PRIME | chr15 | TogoVar | |||||
CHRNA7_chr15_32025515_32178018 | 32158289 | CTTT | C | intron_variant | MODIFIER | HG00408.hp2 HG00558.hp2 HG00597.hp1 others(56): Show |
a0001 | a0001c0002a0001c0006a0001c0009 | a0001c0002t0001a0001c0002t0002a0001c0002t0006others(6): Show | a0001c0002t0001g0020a0001c0002t0002g0015a0001c0002t0002g0023others(56): Show | 59 | 307 | 0.1922 | -3 | c.599 others(18): Show |
CHRNA7 | ENSG00000175344.19 | transcript | ENST00000306901.9 | protein_coding | 6/9 | INFO_REALIGN_3_PRIME | chr15 | TogoVar | |||||
CHRNA7_chr15_32025515_32178018 | 32164913 | TAAA | T | intron_variant | MODIFIER | HG00323.hp2 HG00597.hp2 HG00639.hp2 others(34): Show |
a0001 | a0001c0001a0001c0003a0001c0005 | a0001c0001t0001a0001c0001t0003a0001c0001t0013others(7): Show | a0001c0001t0001g0006a0001c0001t0001g0009a0001c0001t0001g0017others(34): Show | 37 | 307 | 0.1205 | -3 | c.990 others(20): Show |
CHRNA7 | ENSG00000175344.19 | transcript | ENST00000306901.9 | protein_coding | 9/9 | INFO_REALIGN_3_PRIME | chr15 | TogoVar | |||||
CHRNA7_chr15_32025515_32178018 | 32174693 | CTTT | C | downstream_gene_variant | MODIFIER | HG02895.hp2 HG02976.hp1 HG02976.hp2 others(4): Show |
a0001 | a0001c0001a0001c0003 | a0001c0001t0001a0001c0001t0016a0001c0001t0040others(1): Show | a0001c0001t0001g0085a0001c0001t0001g0145a0001c0001t0001g0223others(4): Show | 7 | 307 | 0.0228 | -3 | c.*62 others(14): Show |
CHRNA7 | ENSG00000175344.19 | transcript | ENST00000306901.9 | protein_coding | 1676 | chr15 | TogoVar | ||||||
CHRNA7_chr15_32025515_32178018 | 32177778 | GCCT | G | downstream_gene_variant | MODIFIER | HG01070.hp2 HG01071.hp1 HG01496.hp1 others(13): Show |
a0001a0003 | a0001c0001a0001c0004a0001c0010others(1): Show | a0001c0001t0009a0001c0004t0008a0001c0004t0009others(6): Show | a0001c0001t0009g0203a0001c0004t0008g0194a0001c0004t0009g0078others(13): Show | 16 | 307 | 0.0521 | -3 | c.*93 others(14): Show |
CHRNA7 | ENSG00000175344.19 | transcript | ENST00000306901.9 | protein_coding | 4761 | chr15 | TogoVar | ||||||
CHRNA9_chr4_40330333_40360217 | 40339279 | CAAA | C | intron_variant | MODIFIER | HG01074.hp1 HG01884.hp2 HG01891.hp1 others(22): Show |
a0001a0003a0004others(2): Show | a0001c0002a0001c0004a0003c0006others(6): Show | a0001c0002t0001a0001c0002t0002a0001c0004t0002others(7): Show | a0001c0002t0001g0224a0001c0002t0002g0171a0001c0004t0002g0175others(18): Show | 25 | 420 | 0.0595 | -3 | c.365 others(20): Show |
CHRNA9 | ENSG00000174343.6 | transcript | ENST00000310169.3 | protein_coding | 3/4 | INFO_REALIGN_3_PRIME | chr4 | TogoVar | |||||
CHRNA9_chr4_40330333_40360217 | 40342838 | GAGA | G | intron_variant | MODIFIER | HG00741.hp2 HG01106.hp2 HG01346.hp1 others(6): Show |
a0003 | a0003c0006 | a0003c0006t0004 | a0003c0006t0004g0008a0003c0006t0004g0235a0003c0006t0004g0236 | 9 | 420 | 0.0214 | -3 | c.365 others(20): Show |
CHRNA9 | ENSG00000174343.6 | transcript | ENST00000310169.3 | protein_coding | 3/4 | INFO_REALIGN_3_PRIME | chr4 | TogoVar | |||||
CHRNA9_chr4_40330333_40360217 | 40352639 | CAAT | C | intron_variant | MODIFIER | HG00323.hp2 HG00408.hp1 HG00558.hp2 others(66): Show |
a0002 | a0002c0003a0002c0009a0002c0013 | a0002c0003t0001a0002c0009t0001a0002c0013t0001others(1): Show | a0002c0003t0001g0004a0002c0003t0001g0007a0002c0003t0001g0014others(35): Show | 69 | 420 | 0.1643 | -3 | c.899 others(20): Show |
CHRNA9 | ENSG00000174343.6 | transcript | ENST00000310169.3 | protein_coding | 4/4 | chr4 | TogoVar | ||||||
CHRNB1_chr17_7440061_7462710 | 7454794 | CTTT | C | intron_variant | MODIFIER | HG03041.hp2 HG03927.hp1 NA18957.hp1 others(3): Show |
a0001 | a0001c0001 | a0001c0001t0003 | a0001c0001t0003g0035a0001c0001t0003g0094a0001c0001t0003g0097others(3): Show | 6 | 368 | 0.0163 | -3 | c.104 others(20): Show |
CHRNB1 | ENSG00000170175.11 | transcript | ENST00000306071.7 | protein_coding | 8/10 | INFO_REALIGN_3_PRIME | chr17 | TogoVar | |||||
CHRNB2_chr1_154562778_154585013 | 154566489 | GAAA | G | upstream_gene_variant | MODIFIER | HG01884.hp2 HG01891.hp1 HG02055.hp2 others(33): Show |
a0001a0002 | a0001c0001a0001c0002a0002c0003 | a0001c0001t0006a0001c0001t0014a0001c0001t0019others(5): Show | a0001c0001t0006g0003a0001c0001t0006g0005a0001c0001t0006g0046others(11): Show | 36 | 424 | 0.0849 | -3 | c.-15 others(14): Show |
CHRNB2 | ENSG00000160716.6 | transcript | ENST00000368476.4 | protein_coding | 1288 | chr1 | TogoVar | ||||||
CHRNB3_chr8_42692366_42742407 | 42720111 | CTTT | C | intron_variant | MODIFIER | HG00140.hp2 HG00438.hp1 HG00544.hp1 others(25): Show |
a0001 | a0001c0001 | a0001c0001t0002a0001c0001t0006 | a0001c0001t0002g0145a0001c0001t0002g0147a0001c0001t0002g0152others(25): Show | 28 | 282 | 0.0993 | -3 | c.249 others(20): Show |
CHRNB3 | ENSG00000147432.7 | transcript | ENST00000289957.3 | protein_coding | 3/5 | INFO_REALIGN_3_PRIME | chr8 | TogoVar | |||||
CHRNB3_chr8_42692366_42742407 | 42725089 | CTTT | C | intron_variant | MODIFIER | HG02055.hp1 HG02258.hp1 HG02451.hp2 others(8): Show |
a0001a0002 | a0001c0004a0002c0002 | a0001c0004t0007a0002c0002t0004 | a0001c0004t0007g0025a0001c0004t0007g0026a0002c0002t0004g0119others(8): Show | 11 | 282 | 0.0390 | -3 | c.250 others(20): Show |
CHRNB3 | ENSG00000147432.7 | transcript | ENST00000289957.3 | protein_coding | 3/5 | INFO_REALIGN_3_PRIME | chr8 | TogoVar | |||||
CHRNB4_chr15_78619111_78646210 | 78620725 | ACAG | A | downstream_gene_variant | MODIFIER | HG00099.hp1 HG00099.hp2 HG00140.hp1 others(313): Show |
a0001a0002a0003others(6): Show | a0001c0001a0001c0005a0001c0010others(12): Show | a0001c0001t0001a0001c0001t0002a0001c0001t0003others(26): Show | a0001c0001t0001g0001a0001c0001t0001g0004a0001c0001t0001g0005others(173): Show | 316 | 416 | 0.7596 | -3 | c.*44 others(14): Show |
CHRNB4 | ENSG00000117971.12 | transcript | ENST00000261751.8 | protein_coding | 3385 | chr15 | TogoVar | ||||||
CHRNB4_chr15_78619111_78646210 | 78622847 | CAAA | C | downstream_gene_variant | MODIFIER | HG00099.hp1 HG00140.hp1 HG00140.hp2 others(154): Show |
a0001a0002a0003others(5): Show | a0001c0001a0001c0005a0001c0010others(11): Show | a0001c0001t0001a0001c0001t0002a0001c0001t0003others(18): Show | a0001c0001t0001g0001a0001c0001t0001g0004a0001c0001t0001g0010others(85): Show | 157 | 416 | 0.3774 | -3 | c.*22 others(14): Show |
CHRNB4 | ENSG00000117971.12 | transcript | ENST00000261751.8 | protein_coding | 1263 | chr15 | TogoVar | ||||||
CHRNB4_chr15_78619111_78646210 | 78624364 | AGAG | A | 3_prime_UTR_variant | MODIFIER | HG01109.hp2 HG02145.hp2 HG02257.hp2 others(3): Show |
a0001 | a0001c0001 | a0001c0001t0005 | a0001c0001t0005g0022a0001c0001t0005g0090a0001c0001t0005g0168others(1): Show | 6 | 416 | 0.0144 | -3 | c.*76 others(12): Show |
CHRNB4 | ENSG00000117971.12 | transcript | ENST00000261751.8 | protein_coding | 6/6 | 766 | chr15 | TogoVar | |||||
CHRNB4_chr15_78619111_78646210 | 78643993 | CAAA | C | upstream_gene_variant | MODIFIER | HG01109.hp2 HG01255.hp1 HG01884.hp1 others(29): Show |
a0001a0002a0005 | a0001c0001a0001c0005a0001c0006others(3): Show | a0001c0001t0001a0001c0001t0002a0001c0001t0003others(9): Show | a0001c0001t0001g0043a0001c0001t0001g0140a0001c0001t0001g0161others(27): Show | 32 | 416 | 0.0769 | -3 | c.-28 others(14): Show |
CHRNB4 | ENSG00000117971.12 | transcript | ENST00000261751.8 | protein_coding | 2784 | chr15 | TogoVar | ||||||
CHRND_chr2_232521160_232541664 | 232531946 | CAAA | C | intron_variant | MODIFIER | HG00423.hp2 HG00609.hp2 HG01346.hp1 others(28): Show |
a0001a0011 | a0001c0001a0001c0002a0011c0007 | a0001c0001t0003a0001c0001t0010a0001c0002t0002others(2): Show | a0001c0001t0003g0004a0001c0001t0003g0051a0001c0001t0003g0053others(6): Show | 31 | 438 | 0.0708 | -3 | c.104 others(20): Show |
CHRND | ENSG00000135902.10 | transcript | ENST00000258385.8 | protein_coding | 9/11 | INFO_REALIGN_3_PRIME | chr2 | TogoVar | |||||
CHRND_chr2_232521160_232541664 | 232532476 | CAAA | C | intron_variant | MODIFIER | HG01243.hp1 HG01884.hp2 HG02809.hp2 others(8): Show |
a0001 | a0001c0001a0001c0002 | a0001c0001t0002a0001c0001t0003a0001c0001t0004others(2): Show | a0001c0001t0002g0033a0001c0001t0002g0093a0001c0001t0003g0053others(5): Show | 11 | 438 | 0.0251 | -3 | c.104 others(20): Show |
CHRND | ENSG00000135902.10 | transcript | ENST00000258385.8 | protein_coding | 9/11 | INFO_REALIGN_3_PRIME | chr2 | TogoVar | |||||
CHRND_chr2_232521160_232541664 | 232539110 | AAAG | A | downstream_gene_variant | MODIFIER | HG00673.hp2 HG01934.hp1 NA18939.hp1 others(18): Show |
a0001 | a0001c0001a0001c0002 | a0001c0001t0002a0001c0001t0012a0001c0002t0002 | a0001c0001t0002g0012a0001c0001t0002g0055a0001c0001t0012g0012others(5): Show | 21 | 438 | 0.0480 | -3 | c.*37 others(14): Show |
CHRND | ENSG00000135902.10 | transcript | ENST00000258385.8 | protein_coding | 2447 | chr2 | TogoVar | ||||||
CHRND_chr2_232521160_232541664 | 232541095 | CTAT | C | downstream_gene_variant | MODIFIER | HG00323.hp2 HG00423.hp2 HG00609.hp2 others(38): Show |
a0001a0011 | a0001c0001a0001c0002a0011c0007 | a0001c0001t0002a0001c0001t0003a0001c0001t0010others(3): Show | a0001c0001t0002g0033a0001c0001t0002g0093a0001c0001t0003g0004others(10): Show | 41 | 438 | 0.0936 | -3 | c.*57 others(14): Show |
CHRND | ENSG00000135902.10 | transcript | ENST00000258385.8 | protein_coding | 4432 | chr2 | TogoVar | ||||||
CHRND_chr2_232521160_232541664 | 232541117 | TATG | T | downstream_gene_variant | MODIFIER | HG02040.hp1 HG02895.hp1 HG02897.hp2 others(1): Show |
a0001 | a0001c0001a0001c0002 | a0001c0001t0002a0001c0002t0002 | a0001c0001t0002g0092a0001c0002t0002g0040a0001c0002t0002g0099 | 4 | 438 | 0.0091 | -3 | c.*58 others(14): Show |
CHRND | ENSG00000135902.10 | transcript | ENST00000258385.8 | protein_coding | 4454 | chr2 | TogoVar | ||||||
CHRNE_chr17_4892771_4908098 | 4903330 | TCTC | T | upstream_gene_variant | MODIFIER | HG01358.hp2 HG01884.hp1 HG02109.hp1 others(2): Show |
a0001 | a0001c0001 | a0001c0001t0007a0001c0001t0034 | a0001c0001t0007g0069a0001c0001t0007g0072a0001c0001t0007g0088others(1): Show | 5 | 446 | 0.0112 | -3 | c.-27 others(12): Show |
CHRNE | ENSG00000108556.10 | transcript | ENST00000649488.2 | protein_coding | 233 | chr17 | TogoVar | ||||||
CHRNG_chr2_232534692_232553115 | 232539110 | AAAG | A | upstream_gene_variant | MODIFIER | HG00673.hp2 HG01934.hp1 NA18939.hp1 others(13): Show |
a0001 | a0001c0001 | a0001c0001t0002a0001c0001t0008a0001c0001t0009 | a0001c0001t0002g0001a0001c0001t0002g0027a0001c0001t0008g0001others(1): Show | 16 | 434 | 0.0369 | -3 | c.-63 others(12): Show |
CHRNG | ENSG00000196811.13 | transcript | ENST00000651502.1 | protein_coding | 581 | chr2 | TogoVar | ||||||
CHRNG_chr2_232534692_232553115 | 232541095 | CTAT | C | intron_variant | MODIFIER | HG00323.hp2 HG00423.hp2 HG00558.hp1 others(39): Show |
a0002 | a0002c0003a0002c0004 | a0002c0003t0001a0002c0003t0004a0002c0003t0010others(6): Show | a0002c0003t0001g0068a0002c0003t0004g0004a0002c0003t0004g0071others(11): Show | 42 | 434 | 0.0968 | -3 | c.351 others(18): Show |
CHRNG | ENSG00000196811.13 | transcript | ENST00000651502.1 | protein_coding | 4/11 | INFO_REALIGN_3_PRIME | chr2 | TogoVar | |||||
CHRNG_chr2_232534692_232553115 | 232541117 | TATG | T | intron_variant | MODIFIER | HG02040.hp1 HG02895.hp1 HG02897.hp2 others(1): Show |
a0001a0002 | a0001c0001a0002c0003 | a0001c0001t0006a0001c0001t0009a0002c0003t0010 | a0001c0001t0006g0038a0001c0001t0006g0098a0001c0001t0009g0038others(1): Show | 4 | 434 | 0.0092 | -3 | c.351 others(18): Show |
CHRNG | ENSG00000196811.13 | transcript | ENST00000651502.1 | protein_coding | 4/11 | INFO_REALIGN_3_PRIME | chr2 | TogoVar | |||||
CHRNG_chr2_232534692_232553115 | 232542694 | GATA | G | intron_variant | MODIFIER | HG02486.hp2 HG03471.hp2 NA19240.hp1 |
a0001 | a0001c0001 | a0001c0001t0013 | a0001c0001t0013g0025 | 3 | 434 | 0.0069 | -3 | c.604 others(18): Show |
CHRNG | ENSG00000196811.13 | transcript | ENST00000651502.1 | protein_coding | 6/11 | INFO_REALIGN_3_PRIME | chr2 | TogoVar | |||||
CHST11_chr12_104451948_104767014 | 104453362 | TTTC | T | upstream_gene_variant | MODIFIER | HG00738.hp1 HG01109.hp2 HG02572.hp2 others(10): Show |
a0001 | a0001c0001a0001c0003 | a0001c0001t0001a0001c0001t0002a0001c0001t0007others(6): Show | a0001c0001t0001g0023a0001c0001t0001g0211a0001c0001t0002g0141others(10): Show | 13 | 240 | 0.0542 | -3 | c.-40 others(14): Show |
CHST11 | ENSG00000171310.11 | transcript | ENST00000303694.6 | protein_coding | 3585 | chr12 | TogoVar | ||||||
CHST11_chr12_104451948_104767014 | 104462167 | CAAA | C | intron_variant | MODIFIER | HG00099.hp1 HG00408.hp2 HG00423.hp1 others(41): Show |
a0001 | a0001c0001 | a0001c0001t0001a0001c0001t0002a0001c0001t0003others(13): Show | a0001c0001t0001g0007a0001c0001t0001g0018a0001c0001t0001g0019others(41): Show | 44 | 240 | 0.1833 | -3 | c.118 others(20): Show |
CHST11 | ENSG00000171310.11 | transcript | ENST00000303694.6 | protein_coding | 1/2 | INFO_REALIGN_3_PRIME | chr12 | TogoVar | |||||
CHST11_chr12_104451948_104767014 | 104472138 | TTTC | T | intron_variant | MODIFIER | HG02559.hp1 HG02572.hp2 HG02886.hp2 others(3): Show |
a0001 | a0001c0001 | a0001c0001t0025a0001c0001t0028a0001c0001t0033others(3): Show | a0001c0001t0025g0181a0001c0001t0028g0151a0001c0001t0033g0055others(3): Show | 6 | 240 | 0.0250 | -3 | c.118 others(22): Show |
CHST11 | ENSG00000171310.11 | transcript | ENST00000303694.6 | protein_coding | 1/2 | INFO_REALIGN_3_PRIME | chr12 | TogoVar |