Joint Open Genome and Omics Platform (JoGo)

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ALDH2_chr12_111761933_111822532 / BRCA1_chr17_43039295_43130364 etc.

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Snpeff haplotype class

Snpeff annotation impact

Snpeff annotation impact detail

Hapid

Enter haplotype IDs (e.g., a1c1t1g1, a1c1, a1) separated by commas <= a0001 (zero padding also accept)

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regionname	pos	ref	alt	annotation	impact	samples	ahapids	achapids	acthapids	actghapids	ac	an	af	len	hgvs_c	genename	geneid	featuretype	featureid	transcript_biotype	rank	status	chr	external
CNTN4_chr3_2093866_3062959	2120405	ATTT ATTT	A A	intron_variant intron_variant	MODIFIER	HG00140.hp1 HG00140.hp2 HG01256.hp2 others(20): Show HG00140.hp1 HG00140.hp2 HG01256.hp2 HG01257.hp2 HG01258.hp1 HG01261.hp2 HG01361.hp1 HG01891.hp2 HG02074.hp1 HG02074.hp2 HG02257.hp1 HG02257.hp2 HG02258.hp1 HG02486.hp2 HG02602.hp1 HG02683.hp1 HG02818.hp1 HG03239.hp1 HG03239.hp2 HG03453.hp2 HG03654.hp2 HG03831.hp2 HG06807.hp1	a0001 a0002 a0004 others(2): Show a0001 a0002 a0004 a0006 a0007	a0001c0001 a0001c0002 a0001c0003 others(10): Show a0001c0001 a0001c0002 a0001c0003 a0001c0004 a0001c0006 a0001c0007 a0001c0009 a0001c0021 a0001c0022 a0002c0017 a0004c0011 a0006c0028 a0007c0018	a0001c0001t0001 a0001c0001t0002 a0001c0001t0005 others(15): Show a0001c0001t0001 a0001c0001t0002 a0001c0001t0005 a0001c0001t0008 a0001c0002t0002 a0001c0003t0003 a0001c0004t0001 a0001c0004t0002 a0001c0006t0002 a0001c0006t0003 a0001c0007t0016 a0001c0009t0004 a0001c0021t0002 a0001c0022t0003 a0002c0017t0008 a0004c0011t0003 a0006c0028t0001 a0007c0018t0003	a0001c0001t0001g0099 a0001c0001t0002g0028 a0001c0001t0002g0055 others(20): Show a0001c0001t0001g0099 a0001c0001t0002g0028 a0001c0001t0002g0055 a0001c0001t0005g0098 a0001c0001t0005g0115 a0001c0001t0008g0089 a0001c0002t0002g0063 a0001c0002t0002g0078 a0001c0003t0003g0046 a0001c0004t0001g0097 a0001c0004t0002g0064 a0001c0006t0002g0026 a0001c0006t0002g0060 a0001c0006t0003g0069 a0001c0007t0016g0105 a0001c0009t0004g0005 a0001c0021t0002g0025 a0001c0022t0003g0083 a0002c0017t0008g0067 a0004c0011t0003g0065 a0004c0011t0003g0111 a0006c0028t0001g0023 a0007c0018t0003g0062	23	116	0.1983	-3	c.-14 others(24): Show c.-145+19781_-145+19783delTTT	CNTN4	ENSG00000144619.15	transcript	ENST00000418658.6	protein_coding	2/24	INFO_REALIGN_3_PRIME	chr3	TogoVar
CNTN4_chr3_2093866_3062959	2121496	CAAA CAAA	C C	intron_variant intron_variant	MODIFIER	HG00438.hp1 HG01243.hp2 HG01978.hp1 others(6): Show HG00438.hp1 HG01243.hp2 HG01978.hp1 HG02717.hp2 HG02965.hp1 HG03130.hp1 HG03453.hp1 HG04184.hp1 NA18990.hp2	a0001 a0002 a0001 a0002	a0001c0001 a0001c0002 a0001c0003 others(2): Show a0001c0001 a0001c0002 a0001c0003 a0001c0004 a0002c0016	a0001c0001t0002 a0001c0001t0008 a0001c0002t0001 others(6): Show a0001c0001t0002 a0001c0001t0008 a0001c0002t0001 a0001c0002t0002 a0001c0002t0007 a0001c0003t0001 a0001c0003t0003 a0001c0004t0006 a0002c0016t0003	a0001c0001t0002g0074 a0001c0001t0008g0043 a0001c0002t0001g0027 others(6): Show a0001c0001t0002g0074 a0001c0001t0008g0043 a0001c0002t0001g0027 a0001c0002t0002g0102 a0001c0002t0007g0080 a0001c0003t0001g0075 a0001c0003t0003g0070 a0001c0004t0006g0044 a0002c0016t0003g0079	9	116	0.0776	-3	c.-14 others(24): Show c.-145+20873_-145+20875delAAA	CNTN4	ENSG00000144619.15	transcript	ENST00000418658.6	protein_coding	2/24	INFO_REALIGN_3_PRIME	chr3	TogoVar
CNTN4_chr3_2093866_3062959	2139991	GTCT GTCT	G G	intron_variant intron_variant	MODIFIER	HG02647.hp1 HG02809.hp1 HG02647.hp1 HG02809.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0003 a0001c0001t0001 a0001c0001t0003	a0001c0001t0001g0059 a0001c0001t0003g0058 a0001c0001t0001g0059 a0001c0001t0003g0058	2	116	0.0172	-3	c.-14 others(24): Show c.-145+39354_-145+39356delCTT	CNTN4	ENSG00000144619.15	transcript	ENST00000418658.6	protein_coding	2/24	INFO_REALIGN_3_PRIME	chr3	TogoVar
CNTN4_chr3_2093866_3062959	2166538	AATT AATT	A A	intron_variant intron_variant	MODIFIER	HG00140.hp2 HG00738.hp2 HG02559.hp1 others(2): Show HG00140.hp2 HG00738.hp2 HG02559.hp1 HG03540.hp1 HG03654.hp2	a0001 a0006 a0001 a0006	a0001c0001 a0001c0002 a0001c0005 others(1): Show a0001c0001 a0001c0002 a0001c0005 a0006c0028	a0001c0001t0002 a0001c0001t0005 a0001c0002t0003 others(2): Show a0001c0001t0002 a0001c0001t0005 a0001c0002t0003 a0001c0005t0001 a0006c0028t0001	a0001c0001t0002g0028 a0001c0001t0005g0054 a0001c0002t0003g0024 others(2): Show a0001c0001t0002g0028 a0001c0001t0005g0054 a0001c0002t0003g0024 a0001c0005t0001g0104 a0006c0028t0001g0023	5	116	0.0431	-3	c.-14 others(24): Show c.-145+65906_-145+65908delATT	CNTN4	ENSG00000144619.15	transcript	ENST00000418658.6	protein_coding	2/24	INFO_REALIGN_3_PRIME	chr3	TogoVar
CNTN4_chr3_2093866_3062959	2169513	TCTC TCTC	T T	intron_variant intron_variant	MODIFIER	HG00438.hp2 HG02074.hp2 HG02132.hp2 others(8): Show HG00438.hp2 HG02074.hp2 HG02132.hp2 HG02165.hp2 HG02622.hp1 HG02809.hp2 HG02818.hp2 HG02886.hp2 HG02897.hp1 HG03927.hp1 HG03927.hp2	a0001 a0002 a0003 others(1): Show a0001 a0002 a0003 a0008	a0001c0001 a0001c0002 a0001c0003 others(6): Show a0001c0001 a0001c0002 a0001c0003 a0001c0007 a0001c0013 a0001c0020 a0002c0014 a0003c0019 a0008c0026	a0001c0001t0001 a0001c0001t0002 a0001c0002t0002 others(8): Show a0001c0001t0001 a0001c0001t0002 a0001c0002t0002 a0001c0002t0005 a0001c0003t0011 a0001c0007t0016 a0001c0013t0007 a0001c0020t0002 a0002c0014t0001 a0003c0019t0002 a0008c0026t0017	a0001c0001t0001g0050 a0001c0001t0002g0030 a0001c0002t0002g0035 others(8): Show a0001c0001t0001g0050 a0001c0001t0002g0030 a0001c0002t0002g0035 a0001c0002t0005g0002 a0001c0003t0011g0113 a0001c0007t0016g0105 a0001c0013t0007g0056 a0001c0020t0002g0082 a0002c0014t0001g0016 a0003c0019t0002g0031 a0008c0026t0017g0047	11	116	0.0948	-3	c.-14 others(24): Show c.-145+68877_-145+68879delCCT	CNTN4	ENSG00000144619.15	transcript	ENST00000418658.6	protein_coding	2/24	INFO_REALIGN_3_PRIME	chr3	TogoVar
CNTN4_chr3_2093866_3062959	2170329	AAAC AAAC	A A	intron_variant intron_variant	MODIFIER	HG02257.hp1 HG02897.hp2 HG03041.hp1 HG02257.hp1 HG02897.hp2 HG03041.hp1	a0001 a0001	a0001c0001 a0001c0022 a0001c0001 a0001c0022	a0001c0001t0001 a0001c0001t0003 a0001c0022t0003 a0001c0001t0001 a0001c0001t0003 a0001c0022t0003	a0001c0001t0001g0033 a0001c0001t0003g0006 a0001c0022t0003g0083 a0001c0001t0001g0033 a0001c0001t0003g0006 a0001c0022t0003g0083	3	116	0.0259	-3	c.-14 others(24): Show c.-145+69702_-145+69704delCAA	CNTN4	ENSG00000144619.15	transcript	ENST00000418658.6	protein_coding	2/24	INFO_REALIGN_3_PRIME	chr3	TogoVar
CNTN4_chr3_2093866_3062959	2206511	GAAA GAAA	G G	intron_variant intron_variant	MODIFIER	HG01884.hp2 HG02897.hp2 HG03041.hp1 HG01884.hp2 HG02897.hp2 HG03041.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0003 a0001c0001t0009 a0001c0001t0001 a0001c0001t0003 a0001c0001t0009	a0001c0001t0001g0033 a0001c0001t0003g0006 a0001c0001t0009g0052 a0001c0001t0001g0033 a0001c0001t0003g0006 a0001c0001t0009g0052	3	116	0.0259	-3	c.-14 others(26): Show c.-145+105877_-145+105879delAAA	CNTN4	ENSG00000144619.15	transcript	ENST00000418658.6	protein_coding	2/24	INFO_REALIGN_3_PRIME	chr3	TogoVar
CNTN4_chr3_2093866_3062959	2206516	AAAT AAAT	A A	intron_variant intron_variant	MODIFIER	HG02257.hp1 HG02615.hp1 HG02647.hp2 others(3): Show HG02257.hp1 HG02615.hp1 HG02647.hp2 HG03041.hp2 HG03209.hp1 HG03516.hp2	a0001 a0001	a0001c0001 a0001c0005 a0001c0006 others(2): Show a0001c0001 a0001c0005 a0001c0006 a0001c0010 a0001c0022	a0001c0001t0004 a0001c0005t0010 a0001c0006t0004 others(2): Show a0001c0001t0004 a0001c0005t0010 a0001c0006t0004 a0001c0010t0003 a0001c0022t0003	a0001c0001t0004g0042 a0001c0001t0004g0081 a0001c0005t0010g0001 others(3): Show a0001c0001t0004g0042 a0001c0001t0004g0081 a0001c0005t0010g0001 a0001c0006t0004g0004 a0001c0010t0003g0011 a0001c0022t0003g0083	6	116	0.0517	-3	c.-14 others(26): Show c.-145+105880_-145+105882delTAA	CNTN4	ENSG00000144619.15	transcript	ENST00000418658.6	protein_coding	2/24	INFO_REALIGN_3_PRIME	chr3	TogoVar
CNTN4_chr3_2093866_3062959	2206519	TAAG TAAG	T T	intron_variant intron_variant	MODIFIER	HG01361.hp1 HG02683.hp1 HG02818.hp1 HG01361.hp1 HG02683.hp1 HG02818.hp1	a0001 a0002 a0004 a0001 a0002 a0004	a0001c0002 a0002c0017 a0004c0011 a0001c0002 a0002c0017 a0004c0011	a0001c0002t0002 a0002c0017t0008 a0004c0011t0003 a0001c0002t0002 a0002c0017t0008 a0004c0011t0003	a0001c0002t0002g0063 a0002c0017t0008g0067 a0004c0011t0003g0065 a0001c0002t0002g0063 a0002c0017t0008g0067 a0004c0011t0003g0065	3	116	0.0259	-3	c.-14 others(26): Show c.-145+105885_-145+105887delAGA	CNTN4	ENSG00000144619.15	transcript	ENST00000418658.6	protein_coding	2/24	INFO_REALIGN_3_PRIME	chr3	TogoVar
CNTN4_chr3_2093866_3062959	2207023	CTTA CTTA	C C	intron_variant intron_variant	MODIFIER	HG00438.hp1 HG01175.hp1 HG01891.hp2 others(6): Show HG00438.hp1 HG01175.hp1 HG01891.hp2 HG02074.hp1 HG03139.hp2 HG03927.hp1 HG04184.hp1 NA18906.hp1 NA18990.hp2	a0001 a0002 a0001 a0002	a0001c0001 a0001c0002 a0001c0003 others(4): Show a0001c0001 a0001c0002 a0001c0003 a0001c0006 a0001c0009 a0001c0010 a0002c0015	a0001c0001t0001 a0001c0001t0002 a0001c0002t0001 others(6): Show a0001c0001t0001 a0001c0001t0002 a0001c0002t0001 a0001c0003t0001 a0001c0003t0003 a0001c0006t0003 a0001c0009t0004 a0001c0010t0003 a0002c0015t0003	a0001c0001t0001g0050 a0001c0001t0002g0074 a0001c0002t0001g0088 others(6): Show a0001c0001t0001g0050 a0001c0001t0002g0074 a0001c0002t0001g0088 a0001c0003t0001g0075 a0001c0003t0003g0070 a0001c0006t0003g0069 a0001c0009t0004g0005 a0001c0010t0003g0077 a0002c0015t0003g0103	9	116	0.0776	-3	c.-14 others(26): Show c.-145+106392_-145+106394delTAT	CNTN4	ENSG00000144619.15	transcript	ENST00000418658.6	protein_coding	2/24	INFO_REALIGN_3_PRIME	chr3	TogoVar
CNTN4_chr3_2093866_3062959	2213828	TTTG TTTG	T T	intron_variant intron_variant	MODIFIER	HG02615.hp1 HG03041.hp2 HG03209.hp1 HG02615.hp1 HG03041.hp2 HG03209.hp1	a0001 a0001	a0001c0001 a0001c0005 a0001c0006 a0001c0001 a0001c0005 a0001c0006	a0001c0001t0004 a0001c0005t0010 a0001c0006t0004 a0001c0001t0004 a0001c0005t0010 a0001c0006t0004	a0001c0001t0004g0081 a0001c0005t0010g0001 a0001c0006t0004g0004 a0001c0001t0004g0081 a0001c0005t0010g0001 a0001c0006t0004g0004	3	116	0.0259	-3	c.-14 others(26): Show c.-145+113201_-145+113203delGTT	CNTN4	ENSG00000144619.15	transcript	ENST00000418658.6	protein_coding	2/24	INFO_REALIGN_3_PRIME	chr3	TogoVar
CNTN4_chr3_2093866_3062959	2215883	CAAA CAAA	C C	intron_variant intron_variant	MODIFIER	HG00140.hp2 HG01175.hp2 HG01884.hp2 others(5): Show HG00140.hp2 HG01175.hp2 HG01884.hp2 HG02451.hp2 HG02559.hp1 HG02572.hp2 HG02809.hp1 HG03471.hp1	a0001 a0001	a0001c0001 a0001c0002 a0001c0003 others(2): Show a0001c0001 a0001c0002 a0001c0003 a0001c0004 a0001c0005	a0001c0001t0002 a0001c0001t0003 a0001c0001t0009 others(5): Show a0001c0001t0002 a0001c0001t0003 a0001c0001t0009 a0001c0002t0005 a0001c0003t0006 a0001c0004t0006 a0001c0005t0001 a0001c0005t0010	a0001c0001t0002g0028 a0001c0001t0003g0058 a0001c0001t0009g0052 others(5): Show a0001c0001t0002g0028 a0001c0001t0003g0058 a0001c0001t0009g0052 a0001c0002t0005g0003 a0001c0003t0006g0040 a0001c0004t0006g0068 a0001c0005t0001g0104 a0001c0005t0010g0085	8	116	0.0690	-3	c.-14 others(26): Show c.-145+115266_-145+115268delAAA	CNTN4	ENSG00000144619.15	transcript	ENST00000418658.6	protein_coding	2/24	INFO_REALIGN_3_PRIME	chr3	TogoVar
CNTN4_chr3_2093866_3062959	2224504	CTTA CTTA	C C	intron_variant intron_variant	MODIFIER	HG02683.hp1 HG02818.hp1 HG02683.hp1 HG02818.hp1	a0001 a0002 a0001 a0002	a0001c0002 a0002c0017 a0001c0002 a0002c0017	a0001c0002t0002 a0002c0017t0008 a0001c0002t0002 a0002c0017t0008	a0001c0002t0002g0063 a0002c0017t0008g0067 a0001c0002t0002g0063 a0002c0017t0008g0067	2	116	0.0172	-3	c.-14 others(26): Show c.-144-114668_-144-114666delATT	CNTN4	ENSG00000144619.15	transcript	ENST00000418658.6	protein_coding	2/24	INFO_REALIGN_3_PRIME	chr3	TogoVar
CNTN4_chr3_2093866_3062959	2234370	CAAA CAAA	C C	intron_variant intron_variant	MODIFIER	HG02559.hp1 HG02572.hp1 HG02615.hp1 others(4): Show HG02559.hp1 HG02572.hp1 HG02615.hp1 HG02809.hp1 HG03041.hp2 HG03209.hp1 HG03471.hp1	a0001 a0001	a0001c0001 a0001c0002 a0001c0005 others(1): Show a0001c0001 a0001c0002 a0001c0005 a0001c0006	a0001c0001t0003 a0001c0001t0004 a0001c0002t0001 others(3): Show a0001c0001t0003 a0001c0001t0004 a0001c0002t0001 a0001c0005t0001 a0001c0005t0010 a0001c0006t0004	a0001c0001t0003g0058 a0001c0001t0004g0081 a0001c0002t0001g0110 others(4): Show a0001c0001t0003g0058 a0001c0001t0004g0081 a0001c0002t0001g0110 a0001c0005t0001g0104 a0001c0005t0010g0001 a0001c0005t0010g0085 a0001c0006t0004g0004	7	116	0.0603	-3	c.-14 others(26): Show c.-144-104789_-144-104787delAAA	CNTN4	ENSG00000144619.15	transcript	ENST00000418658.6	protein_coding	2/24	INFO_REALIGN_3_PRIME	chr3	TogoVar
CNTN4_chr3_2093866_3062959	2239688	GTCT GTCT	G G	intron_variant intron_variant	MODIFIER	HG03139.hp2 NA18906.hp1 HG03139.hp2 NA18906.hp1	a0001 a0002 a0001 a0002	a0001c0002 a0002c0015 a0001c0002 a0002c0015	a0001c0002t0001 a0002c0015t0003 a0001c0002t0001 a0002c0015t0003	a0001c0002t0001g0088 a0002c0015t0003g0103 a0001c0002t0001g0088 a0002c0015t0003g0103	2	116	0.0172	-3	c.-14 others(24): Show c.-144-99482_-144-99480delCTT	CNTN4	ENSG00000144619.15	transcript	ENST00000418658.6	protein_coding	2/24	INFO_REALIGN_3_PRIME	chr3	TogoVar
CNTN4_chr3_2093866_3062959	2241914	ATCT ATCT	A A	intron_variant intron_variant	MODIFIER	HG00140.hp1 HG00639.hp2 HG00738.hp1 others(8): Show HG00140.hp1 HG00639.hp2 HG00738.hp1 HG01256.hp2 HG01257.hp2 HG01258.hp1 HG01978.hp1 HG02165.hp2 HG02486.hp2 HG02523.hp2 HG03239.hp1	a0001 a0007 a0001 a0007	a0001c0001 a0001c0002 a0001c0003 others(2): Show a0001c0001 a0001c0002 a0001c0003 a0001c0004 a0007c0018	a0001c0001t0001 a0001c0001t0002 a0001c0001t0005 others(7): Show a0001c0001t0001 a0001c0001t0002 a0001c0001t0005 a0001c0002t0007 a0001c0003t0002 a0001c0003t0011 a0001c0004t0001 a0001c0004t0002 a0001c0004t0006 a0007c0018t0003	a0001c0001t0001g0099 a0001c0001t0002g0055 a0001c0001t0005g0098 others(8): Show a0001c0001t0001g0099 a0001c0001t0002g0055 a0001c0001t0005g0098 a0001c0002t0007g0112 a0001c0003t0002g0061 a0001c0003t0011g0113 a0001c0004t0001g0097 a0001c0004t0002g0064 a0001c0004t0002g0076 a0001c0004t0006g0044 a0007c0018t0003g0062	11	116	0.0948	-3	c.-14 others(24): Show c.-144-97259_-144-97257delCTT	CNTN4	ENSG00000144619.15	transcript	ENST00000418658.6	protein_coding	2/24	INFO_REALIGN_3_PRIME	chr3	TogoVar
CNTN4_chr3_2093866_3062959	2259912	CTCT CTCT	C C	intron_variant intron_variant	MODIFIER	HG01243.hp1 HG01891.hp1 HG02451.hp1 others(12): Show HG01243.hp1 HG01891.hp1 HG02451.hp1 HG02486.hp1 HG02559.hp2 HG02615.hp2 HG02717.hp2 HG03130.hp2 HG03139.hp1 HG03453.hp1 HG03471.hp2 HG03540.hp1 HG03654.hp2 HG06807.hp2 NA18906.hp2	a0001 a0003 a0005 others(2): Show a0001 a0003 a0005 a0006 a0009	a0001c0001 a0001c0002 a0001c0006 others(4): Show a0001c0001 a0001c0002 a0001c0006 a0003c0008 a0005c0012 a0006c0028 a0009c0027	a0001c0001t0003 a0001c0001t0008 a0001c0002t0001 others(6): Show a0001c0001t0003 a0001c0001t0008 a0001c0002t0001 a0001c0002t0003 a0001c0006t0002 a0003c0008t0013 a0005c0012t0009 a0006c0028t0001 a0009c0027t0001	a0001c0001t0003g0008 a0001c0001t0003g0101 a0001c0001t0008g0043 others(12): Show a0001c0001t0003g0008 a0001c0001t0003g0101 a0001c0001t0008g0043 a0001c0001t0008g0053 a0001c0002t0001g0021 a0001c0002t0001g0027 a0001c0002t0001g0029 a0001c0002t0001g0108 a0001c0002t0003g0024 a0001c0002t0003g0114 a0001c0006t0002g0051 a0003c0008t0013g0109 a0005c0012t0009g0093 a0006c0028t0001g0023 a0009c0027t0001g0007	15	116	0.1293	-3	c.-14 others(24): Show c.-144-79261_-144-79259delCTT	CNTN4	ENSG00000144619.15	transcript	ENST00000418658.6	protein_coding	2/24	INFO_REALIGN_3_PRIME	chr3	TogoVar
CNTN4_chr3_2093866_3062959	2275935	AAAC AAAC	A A	intron_variant intron_variant	MODIFIER	HG00438.hp2 HG00639.hp1 HG00642.hp1 others(27): Show HG00438.hp2 HG00639.hp1 HG00642.hp1 HG00642.hp2 HG00735.hp2 HG01169.hp2 HG01257.hp1 HG02132.hp1 HG02132.hp2 HG02257.hp2 HG02258.hp1 HG02258.hp2 HG02451.hp2 HG02602.hp2 HG02622.hp1 HG02647.hp1 HG02818.hp2 HG02886.hp2 HG02897.hp1 HG02965.hp2 HG03209.hp2 HG03239.hp2 HG03486.hp1 HG03654.hp1 HG03831.hp1 HG03927.hp2 HG04184.hp2 HG06807.hp1 NA20300.hp1 NA20300.hp2	a0001 a0002 a0008 a0001 a0002 a0008	a0001c0001 a0001c0002 a0001c0003 others(11): Show a0001c0001 a0001c0002 a0001c0003 a0001c0004 a0001c0005 a0001c0006 a0001c0007 a0001c0009 a0001c0013 a0001c0020 a0001c0021 a0001c0023 a0002c0014 a0008c0026	a0001c0001t0001 a0001c0001t0002 a0001c0001t0005 others(23): Show a0001c0001t0001 a0001c0001t0002 a0001c0001t0005 a0001c0001t0008 a0001c0002t0002 a0001c0002t0005 a0001c0002t0006 a0001c0002t0012 a0001c0003t0001 a0001c0003t0002 a0001c0003t0003 a0001c0004t0001 a0001c0004t0002 a0001c0004t0006 a0001c0005t0001 a0001c0005t0006 a0001c0006t0002 a0001c0007t0003 a0001c0007t0004 a0001c0009t0014 a0001c0013t0007 a0001c0020t0002 a0001c0021t0002 a0001c0023t0004 a0002c0014t0001 a0008c0026t0017	a0001c0001t0001g0012 a0001c0001t0001g0049 a0001c0001t0001g0059 others(27): Show a0001c0001t0001g0012 a0001c0001t0001g0049 a0001c0001t0001g0059 a0001c0001t0002g0030 a0001c0001t0005g0115 a0001c0001t0008g0089 a0001c0002t0002g0035 a0001c0002t0005g0002 a0001c0002t0006g0071 a0001c0002t0012g0013 a0001c0003t0001g0045 a0001c0003t0002g0107 a0001c0003t0003g0015 a0001c0004t0001g0106 a0001c0004t0002g0022 a0001c0004t0002g0048 a0001c0004t0006g0068 a0001c0005t0001g0092 a0001c0005t0001g0096 a0001c0005t0006g0032 a0001c0006t0002g0026 a0001c0007t0003g0034 a0001c0007t0004g0066 a0001c0009t0014g0039 a0001c0013t0007g0056 a0001c0020t0002g0082 a0001c0021t0002g0025 a0001c0023t0004g0041 a0002c0014t0001g0016 a0008c0026t0017g0047	30	116	0.2586	-3	c.-14 others(24): Show c.-144-63240_-144-63238delCAA	CNTN4	ENSG00000144619.15	transcript	ENST00000418658.6	protein_coding	2/24	INFO_REALIGN_3_PRIME	chr3	TogoVar
CNTN4_chr3_2093866_3062959	2287629	AAGG AAGG	A A	intron_variant intron_variant	MODIFIER	HG01169.hp2 HG01891.hp2 HG01169.hp2 HG01891.hp2	a0001 a0001	a0001c0001 a0001c0006 a0001c0001 a0001c0006	a0001c0001t0001 a0001c0006t0003 a0001c0001t0001 a0001c0006t0003	a0001c0001t0001g0049 a0001c0006t0003g0069 a0001c0001t0001g0049 a0001c0006t0003g0069	2	116	0.0172	-3	c.-14 others(24): Show c.-144-51546_-144-51544delGAG	CNTN4	ENSG00000144619.15	transcript	ENST00000418658.6	protein_coding	2/24	INFO_REALIGN_3_PRIME	chr3	TogoVar
CNTN4_chr3_2093866_3062959	2287632	GAGA GAGA	G G	intron_variant intron_variant	MODIFIER	HG01257.hp2 HG01258.hp1 HG03239.hp1 HG01257.hp2 HG01258.hp1 HG03239.hp1	a0001 a0001	a0001c0001 a0001c0004 a0001c0001 a0001c0004	a0001c0001t0005 a0001c0004t0001 a0001c0004t0002 a0001c0001t0005 a0001c0004t0001 a0001c0004t0002	a0001c0001t0005g0098 a0001c0004t0001g0097 a0001c0004t0002g0064 a0001c0001t0005g0098 a0001c0004t0001g0097 a0001c0004t0002g0064	3	116	0.0259	-3	c.-14 others(24): Show c.-144-51488_-144-51486delAGA	CNTN4	ENSG00000144619.15	transcript	ENST00000418658.6	protein_coding	2/24	INFO_REALIGN_3_PRIME	chr3	TogoVar
CNTN4_chr3_2093866_3062959	2287690	AGAG AGAG	A A	intron_variant intron_variant	MODIFIER	HG02559.hp2 HG06807.hp2 NA19043.hp1 HG02559.hp2 HG06807.hp2 NA19043.hp1	a0001 a0001	a0001c0001 a0001c0002 a0001c0006 a0001c0001 a0001c0002 a0001c0006	a0001c0001t0003 a0001c0002t0003 a0001c0006t0002 a0001c0001t0003 a0001c0002t0003 a0001c0006t0002	a0001c0001t0003g0095 a0001c0002t0003g0114 a0001c0006t0002g0051 a0001c0001t0003g0095 a0001c0002t0003g0114 a0001c0006t0002g0051	3	116	0.0259	-3	c.-14 others(24): Show c.-144-51485_-144-51483delGGA	CNTN4	ENSG00000144619.15	transcript	ENST00000418658.6	protein_coding	2/24	INFO_REALIGN_3_PRIME	chr3	TogoVar
CNTN4_chr3_2093866_3062959	2287711	GGAA GGAA	G G	intron_variant intron_variant	MODIFIER	HG01243.hp1 HG01891.hp1 HG02559.hp2 others(3): Show HG01243.hp1 HG01891.hp1 HG02559.hp2 HG02717.hp1 HG02818.hp1 NA19043.hp2	a0001 a0002 a0001 a0002	a0001c0001 a0001c0002 a0001c0006 others(1): Show a0001c0001 a0001c0002 a0001c0006 a0002c0017	a0001c0001t0002 a0001c0001t0008 a0001c0002t0001 others(3): Show a0001c0001t0002 a0001c0001t0008 a0001c0002t0001 a0001c0002t0007 a0001c0006t0002 a0002c0017t0008	a0001c0001t0002g0086 a0001c0001t0008g0053 a0001c0002t0001g0029 others(3): Show a0001c0001t0002g0086 a0001c0001t0008g0053 a0001c0002t0001g0029 a0001c0002t0007g0009 a0001c0006t0002g0051 a0002c0017t0008g0067	6	116	0.0517	-3	c.-14 others(24): Show c.-144-51402_-144-51400delAAG	CNTN4	ENSG00000144619.15	transcript	ENST00000418658.6	protein_coding	2/24	INFO_REALIGN_3_PRIME	chr3	TogoVar
CNTN4_chr3_2093866_3062959	2296798	AAAC AAAC	A A	intron_variant intron_variant	MODIFIER	HG00438.hp2 HG00735.hp2 HG01169.hp2 others(22): Show HG00438.hp2 HG00735.hp2 HG01169.hp2 HG01361.hp1 HG02074.hp1 HG02165.hp1 HG02257.hp1 HG02451.hp1 HG02486.hp2 HG02559.hp1 HG02572.hp1 HG02572.hp2 HG02615.hp2 HG02886.hp2 HG03041.hp2 HG03130.hp1 HG03471.hp1 HG03486.hp2 HG03516.hp1 HG03540.hp1 HG04184.hp1 HG04184.hp2 NA18990.hp1 NA18990.hp2 NA20300.hp2	a0001 a0002 a0004 others(2): Show a0001 a0002 a0004 a0007 a0009	a0001c0001 a0001c0002 a0001c0003 others(10): Show a0001c0001 a0001c0002 a0001c0003 a0001c0004 a0001c0005 a0001c0009 a0001c0020 a0001c0022 a0001c0024 a0002c0016 a0004c0011 a0007c0018 a0009c0027	a0001c0001t0001 a0001c0001t0002 a0001c0001t0003 others(19): Show a0001c0001t0001 a0001c0001t0002 a0001c0001t0003 a0001c0002t0001 a0001c0002t0003 a0001c0002t0005 a0001c0002t0006 a0001c0003t0001 a0001c0003t0003 a0001c0004t0001 a0001c0004t0002 a0001c0005t0001 a0001c0005t0010 a0001c0009t0004 a0001c0009t0014 a0001c0020t0002 a0001c0022t0003 a0001c0024t0015 a0002c0016t0003 a0004c0011t0003 a0007c0018t0003 a0009c0027t0001	a0001c0001t0001g0049 a0001c0001t0002g0030 a0001c0001t0003g0101 others(22): Show a0001c0001t0001g0049 a0001c0001t0002g0030 a0001c0001t0003g0101 a0001c0002t0001g0110 a0001c0002t0003g0024 a0001c0002t0005g0003 a0001c0002t0006g0071 a0001c0003t0001g0075 a0001c0003t0001g0116 a0001c0003t0003g0070 a0001c0004t0001g0020 a0001c0004t0002g0048 a0001c0005t0001g0090 a0001c0005t0001g0104 a0001c0005t0010g0001 a0001c0005t0010g0085 a0001c0009t0004g0005 a0001c0009t0014g0039 a0001c0020t0002g0082 a0001c0022t0003g0083 a0001c0024t0015g0057 a0002c0016t0003g0079 a0004c0011t0003g0065 a0007c0018t0003g0062 a0009c0027t0001g0007	25	116	0.2155	-3	c.-14 others(24): Show c.-144-42374_-144-42372delCAA	CNTN4	ENSG00000144619.15	transcript	ENST00000418658.6	protein_coding	2/24	INFO_REALIGN_3_PRIME	chr3	TogoVar
CNTN4_chr3_2093866_3062959	2300560	CTTT CTTT	C C	intron_variant intron_variant	MODIFIER	HG00140.hp1 HG01256.hp2 HG02486.hp2 others(1): Show HG00140.hp1 HG01256.hp2 HG02486.hp2 HG02818.hp1	a0001 a0002 a0007 a0001 a0002 a0007	a0001c0001 a0002c0017 a0007c0018 a0001c0001 a0002c0017 a0007c0018	a0001c0001t0001 a0001c0001t0002 a0002c0017t0008 others(1): Show a0001c0001t0001 a0001c0001t0002 a0002c0017t0008 a0007c0018t0003	a0001c0001t0001g0099 a0001c0001t0002g0055 a0002c0017t0008g0067 others(1): Show a0001c0001t0001g0099 a0001c0001t0002g0055 a0002c0017t0008g0067 a0007c0018t0003g0062	4	116	0.0345	-3	c.-14 others(24): Show c.-144-38590_-144-38588delTTT	CNTN4	ENSG00000144619.15	transcript	ENST00000418658.6	protein_coding	2/24	INFO_REALIGN_3_PRIME	chr3	TogoVar
CNTN4_chr3_2093866_3062959	2335584	GTTT GTTT	G G	intron_variant intron_variant	MODIFIER	HG00140.hp2 HG00438.hp1 HG00438.hp2 others(66): Show HG00140.hp2 HG00438.hp1 HG00438.hp2 HG00639.hp1 HG00639.hp2 HG00642.hp2 HG00735.hp1 HG00735.hp2 HG01169.hp1 HG01169.hp2 HG01243.hp1 HG01243.hp2 HG01256.hp1 HG01257.hp2 HG01258.hp1 HG01258.hp2 HG01261.hp1 HG01261.hp2 HG01361.hp1 HG01361.hp2 HG01884.hp1 HG01884.hp2 HG01978.hp1 HG01978.hp2 HG02074.hp1 HG02132.hp1 HG02132.hp2 HG02165.hp1 HG02165.hp2 HG02257.hp1 HG02258.hp1 HG02258.hp2 HG02451.hp2 HG02486.hp1 HG02523.hp1 HG02523.hp2 HG02559.hp2 HG02572.hp1 HG02602.hp1 HG02602.hp2 HG02615.hp1 HG02615.hp2 HG02622.hp1 HG02647.hp2 HG02683.hp2 HG02717.hp1 HG02738.hp1 HG02818.hp2 HG02897.hp1 HG02897.hp2 HG02965.hp1 HG02965.hp2 HG03041.hp2 HG03130.hp2 HG03209.hp2 HG03239.hp1 HG03516.hp1 HG03654.hp1 HG03654.hp2 HG03831.hp1 HG04184.hp1 HG04184.hp2 HG06807.hp1 HG06807.hp2 NA18906.hp2 NA18990.hp1 NA18990.hp2 NA19043.hp1 NA20300.hp2	a0001 a0002 a0004 others(3): Show a0001 a0002 a0004 a0005 a0006 a0008	a0001c0001 a0001c0002 a0001c0003 others(16): Show a0001c0001 a0001c0002 a0001c0003 a0001c0004 a0001c0005 a0001c0006 a0001c0007 a0001c0009 a0001c0010 a0001c0013 a0001c0020 a0001c0021 a0001c0022 a0001c0025 a0002c0014 a0004c0011 a0005c0012 a0006c0028 a0008c0026	a0001c0001t0001 a0001c0001t0002 a0001c0001t0003 others(37): Show a0001c0001t0001 a0001c0001t0002 a0001c0001t0003 a0001c0001t0004 a0001c0001t0005 a0001c0001t0008 a0001c0001t0009 a0001c0002t0001 a0001c0002t0002 a0001c0002t0003 a0001c0002t0004 a0001c0002t0005 a0001c0002t0006 a0001c0002t0007 a0001c0003t0001 a0001c0003t0002 a0001c0003t0003 a0001c0003t0011 a0001c0004t0001 a0001c0004t0002 a0001c0004t0006 a0001c0005t0001 a0001c0005t0006 a0001c0005t0010 a0001c0006t0002 a0001c0007t0003 a0001c0007t0004 a0001c0009t0004 a0001c0009t0014 a0001c0010t0003 a0001c0013t0007 a0001c0020t0002 a0001c0021t0002 a0001c0022t0003 a0001c0025t0001 a0002c0014t0001 a0004c0011t0003 a0005c0012t0009 a0006c0028t0001 a0008c0026t0017	a0001c0001t0001g0012 a0001c0001t0001g0049 a0001c0001t0002g0028 others(66): Show a0001c0001t0001g0012 a0001c0001t0001g0049 a0001c0001t0002g0028 a0001c0001t0002g0074 a0001c0001t0003g0006 a0001c0001t0003g0008 a0001c0001t0003g0095 a0001c0001t0003g0101 a0001c0001t0004g0081 a0001c0001t0005g0018 a0001c0001t0005g0019 a0001c0001t0005g0098 a0001c0001t0008g0053 a0001c0001t0009g0052 a0001c0002t0001g0038 a0001c0002t0001g0108 a0001c0002t0001g0110 a0001c0002t0002g0102 a0001c0002t0003g0114 a0001c0002t0004g0017 a0001c0002t0005g0002 a0001c0002t0006g0071 a0001c0002t0007g0009 a0001c0002t0007g0080 a0001c0003t0001g0014 a0001c0003t0001g0037 a0001c0003t0001g0045 a0001c0003t0001g0075 a0001c0003t0001g0094 a0001c0003t0001g0116 a0001c0003t0002g0061 a0001c0003t0002g0073 a0001c0003t0002g0107 a0001c0003t0003g0015 a0001c0003t0003g0046 a0001c0003t0003g0070 a0001c0003t0011g0113 a0001c0004t0001g0020 a0001c0004t0001g0036 a0001c0004t0001g0097 a0001c0004t0002g0022 a0001c0004t0002g0048 a0001c0004t0002g0064 a0001c0004t0002g0076 a0001c0004t0006g0044 a0001c0004t0006g0068 a0001c0005t0001g0090 a0001c0005t0001g0092 a0001c0005t0006g0010 a0001c0005t0006g0032 a0001c0005t0010g0001 a0001c0006t0002g0026 a0001c0006t0002g0051 a0001c0007t0003g0034 a0001c0007t0004g0066 a0001c0009t0004g0005 a0001c0009t0014g0039 a0001c0010t0003g0011 a0001c0013t0007g0056 a0001c0020t0002g0082 a0001c0021t0002g0025 a0001c0022t0003g0083 a0001c0025t0001g0100 a0002c0014t0001g0016 a0004c0011t0003g0065 a0004c0011t0003g0111 a0005c0012t0009g0093 a0006c0028t0001g0023 a0008c0026t0017g0047	69	116	0.5948	-3	c.-14 others(22): Show c.-144-3578_-144-3576delTTT	CNTN4	ENSG00000144619.15	transcript	ENST00000418658.6	protein_coding	2/24	INFO_REALIGN_3_PRIME	chr3	TogoVar
CNTN4_chr3_2093866_3062959	2347142	CATT CATT	C C	intron_variant intron_variant	MODIFIER	HG00140.hp1 HG00140.hp2 HG00438.hp1 others(55): Show HG00140.hp1 HG00140.hp2 HG00438.hp1 HG00639.hp1 HG00639.hp2 HG00642.hp2 HG00735.hp1 HG00738.hp1 HG01175.hp1 HG01175.hp2 HG01243.hp1 HG01256.hp1 HG01256.hp2 HG01257.hp2 HG01258.hp1 HG01258.hp2 HG01261.hp1 HG01261.hp2 HG01361.hp1 HG01361.hp2 HG01891.hp2 HG01978.hp1 HG02074.hp2 HG02257.hp1 HG02257.hp2 HG02258.hp1 HG02486.hp2 HG02523.hp1 HG02559.hp2 HG02602.hp1 HG02615.hp1 HG02615.hp2 HG02622.hp1 HG02622.hp2 HG02647.hp2 HG02683.hp1 HG02683.hp2 HG02717.hp1 HG02738.hp1 HG02818.hp1 HG02818.hp2 HG02897.hp1 HG02897.hp2 HG02965.hp1 HG02965.hp2 HG03041.hp1 HG03139.hp2 HG03239.hp1 HG03453.hp2 HG03471.hp2 HG03516.hp1 HG03516.hp2 HG03654.hp1 HG03831.hp2 HG06807.hp1 HG06807.hp2 NA19043.hp1 NA20300.hp2	a0001 a0002 a0003 others(2): Show a0001 a0002 a0003 a0004 a0007	a0001c0001 a0001c0002 a0001c0003 others(13): Show a0001c0001 a0001c0002 a0001c0003 a0001c0004 a0001c0005 a0001c0006 a0001c0007 a0001c0010 a0001c0013 a0001c0021 a0001c0022 a0002c0014 a0002c0017 a0003c0008 a0004c0011 a0007c0018	a0001c0001t0001 a0001c0001t0002 a0001c0001t0003 others(30): Show a0001c0001t0001 a0001c0001t0002 a0001c0001t0003 a0001c0001t0004 a0001c0001t0005 a0001c0001t0008 a0001c0002t0001 a0001c0002t0002 a0001c0002t0003 a0001c0002t0004 a0001c0002t0005 a0001c0002t0006 a0001c0002t0007 a0001c0003t0001 a0001c0003t0002 a0001c0003t0003 a0001c0003t0006 a0001c0004t0001 a0001c0004t0002 a0001c0004t0006 a0001c0005t0001 a0001c0006t0002 a0001c0006t0003 a0001c0007t0016 a0001c0010t0003 a0001c0013t0007 a0001c0021t0002 a0001c0022t0003 a0002c0014t0001 a0002c0017t0008 a0003c0008t0001 a0004c0011t0003 a0007c0018t0003	a0001c0001t0001g0033 a0001c0001t0001g0099 a0001c0001t0002g0028 others(55): Show a0001c0001t0001g0033 a0001c0001t0001g0099 a0001c0001t0002g0028 a0001c0001t0002g0055 a0001c0001t0002g0074 a0001c0001t0003g0006 a0001c0001t0003g0095 a0001c0001t0003g0101 a0001c0001t0004g0042 a0001c0001t0004g0081 a0001c0001t0005g0018 a0001c0001t0005g0019 a0001c0001t0005g0098 a0001c0001t0008g0053 a0001c0001t0008g0089 a0001c0002t0001g0021 a0001c0002t0001g0038 a0001c0002t0001g0088 a0001c0002t0002g0063 a0001c0002t0002g0078 a0001c0002t0003g0114 a0001c0002t0004g0017 a0001c0002t0005g0002 a0001c0002t0006g0071 a0001c0002t0007g0009 a0001c0002t0007g0080 a0001c0002t0007g0112 a0001c0003t0001g0014 a0001c0003t0001g0037 a0001c0003t0001g0045 a0001c0003t0001g0094 a0001c0003t0002g0061 a0001c0003t0002g0107 a0001c0003t0003g0015 a0001c0003t0003g0046 a0001c0003t0006g0040 a0001c0004t0001g0036 a0001c0004t0001g0097 a0001c0004t0002g0064 a0001c0004t0006g0044 a0001c0005t0001g0090 a0001c0005t0001g0092 a0001c0006t0002g0026 a0001c0006t0002g0051 a0001c0006t0002g0060 a0001c0006t0003g0069 a0001c0007t0016g0105 a0001c0010t0003g0011 a0001c0010t0003g0077 a0001c0013t0007g0056 a0001c0021t0002g0025 a0001c0022t0003g0083 a0002c0014t0001g0016 a0002c0017t0008g0067 a0003c0008t0001g0084 a0004c0011t0003g0065 a0004c0011t0003g0111 a0007c0018t0003g0062	58	116	0.5000	-3	c.-89 others(20): Show c.-89+7914_-89+7916delTTA	CNTN4	ENSG00000144619.15	transcript	ENST00000418658.6	protein_coding	3/24	INFO_REALIGN_3_PRIME	chr3	TogoVar
CNTN4_chr3_2093866_3062959	2347685	CAAG CAAG	C C	intron_variant intron_variant	MODIFIER	HG00140.hp2 HG00438.hp1 HG00639.hp1 others(47): Show HG00140.hp2 HG00438.hp1 HG00639.hp1 HG00639.hp2 HG00642.hp2 HG00735.hp1 HG01175.hp1 HG01243.hp1 HG01256.hp1 HG01257.hp2 HG01258.hp1 HG01258.hp2 HG01261.hp1 HG01261.hp2 HG01361.hp1 HG01361.hp2 HG01891.hp2 HG01978.hp1 HG02257.hp1 HG02257.hp2 HG02258.hp1 HG02523.hp1 HG02559.hp2 HG02602.hp1 HG02615.hp1 HG02615.hp2 HG02622.hp1 HG02622.hp2 HG02647.hp2 HG02683.hp1 HG02683.hp2 HG02717.hp1 HG02738.hp1 HG02818.hp2 HG02897.hp1 HG02897.hp2 HG02965.hp1 HG02965.hp2 HG03041.hp1 HG03139.hp2 HG03239.hp1 HG03453.hp2 HG03471.hp2 HG03516.hp1 HG03516.hp2 HG03654.hp1 HG06807.hp1 HG06807.hp2 NA19043.hp1 NA20300.hp2	a0001 a0002 a0003 others(1): Show a0001 a0002 a0003 a0004	a0001c0001 a0001c0002 a0001c0003 others(10): Show a0001c0001 a0001c0002 a0001c0003 a0001c0004 a0001c0005 a0001c0006 a0001c0010 a0001c0013 a0001c0021 a0001c0022 a0002c0014 a0003c0008 a0004c0011	a0001c0001t0001 a0001c0001t0002 a0001c0001t0003 others(26): Show a0001c0001t0001 a0001c0001t0002 a0001c0001t0003 a0001c0001t0004 a0001c0001t0005 a0001c0001t0008 a0001c0002t0001 a0001c0002t0002 a0001c0002t0003 a0001c0002t0004 a0001c0002t0005 a0001c0002t0006 a0001c0002t0007 a0001c0003t0001 a0001c0003t0002 a0001c0003t0003 a0001c0004t0001 a0001c0004t0002 a0001c0004t0006 a0001c0005t0001 a0001c0006t0002 a0001c0006t0003 a0001c0010t0003 a0001c0013t0007 a0001c0021t0002 a0001c0022t0003 a0002c0014t0001 a0003c0008t0001 a0004c0011t0003	a0001c0001t0001g0033 a0001c0001t0002g0028 a0001c0001t0002g0074 others(47): Show a0001c0001t0001g0033 a0001c0001t0002g0028 a0001c0001t0002g0074 a0001c0001t0003g0006 a0001c0001t0003g0095 a0001c0001t0003g0101 a0001c0001t0004g0042 a0001c0001t0004g0081 a0001c0001t0005g0018 a0001c0001t0005g0019 a0001c0001t0005g0098 a0001c0001t0008g0053 a0001c0001t0008g0089 a0001c0002t0001g0021 a0001c0002t0001g0038 a0001c0002t0001g0088 a0001c0002t0002g0063 a0001c0002t0003g0114 a0001c0002t0004g0017 a0001c0002t0005g0002 a0001c0002t0006g0071 a0001c0002t0007g0009 a0001c0002t0007g0080 a0001c0003t0001g0014 a0001c0003t0001g0037 a0001c0003t0001g0045 a0001c0003t0001g0094 a0001c0003t0002g0061 a0001c0003t0002g0107 a0001c0003t0003g0015 a0001c0003t0003g0046 a0001c0004t0001g0036 a0001c0004t0001g0097 a0001c0004t0002g0064 a0001c0004t0006g0044 a0001c0005t0001g0090 a0001c0005t0001g0092 a0001c0006t0002g0026 a0001c0006t0002g0051 a0001c0006t0002g0060 a0001c0006t0003g0069 a0001c0010t0003g0011 a0001c0010t0003g0077 a0001c0013t0007g0056 a0001c0021t0002g0025 a0001c0022t0003g0083 a0002c0014t0001g0016 a0003c0008t0001g0084 a0004c0011t0003g0065 a0004c0011t0003g0111	50	116	0.4310	-3	c.-89 others(20): Show c.-89+8453_-89+8455delAAG	CNTN4	ENSG00000144619.15	transcript	ENST00000418658.6	protein_coding	3/24		chr3	TogoVar
CNTN4_chr3_2093866_3062959	2368029	CTTT CTTT	C C	intron_variant intron_variant	MODIFIER	HG00642.hp1 HG00642.hp2 HG00735.hp2 others(32): Show HG00642.hp1 HG00642.hp2 HG00735.hp2 HG00738.hp2 HG01169.hp1 HG01243.hp1 HG01243.hp2 HG01257.hp1 HG01257.hp2 HG01258.hp1 HG01884.hp1 HG01884.hp2 HG01891.hp1 HG02132.hp2 HG02258.hp1 HG02258.hp2 HG02451.hp2 HG02486.hp1 HG02572.hp1 HG02602.hp2 HG02738.hp2 HG03041.hp1 HG03041.hp2 HG03130.hp2 HG03139.hp1 HG03209.hp1 HG03239.hp2 HG03654.hp2 HG03927.hp1 HG03927.hp2 HG06807.hp1 HG06807.hp2 NA18906.hp2 NA18990.hp1 NA19043.hp1	a0001 a0003 a0005 others(2): Show a0001 a0003 a0005 a0006 a0008	a0001c0001 a0001c0002 a0001c0003 others(11): Show a0001c0001 a0001c0002 a0001c0003 a0001c0004 a0001c0005 a0001c0006 a0001c0007 a0001c0009 a0001c0021 a0001c0025 a0003c0008 a0005c0012 a0006c0028 a0008c0026	a0001c0001t0001 a0001c0001t0003 a0001c0001t0005 others(23): Show a0001c0001t0001 a0001c0001t0003 a0001c0001t0005 a0001c0001t0008 a0001c0001t0009 a0001c0002t0001 a0001c0002t0002 a0001c0002t0003 a0001c0003t0001 a0001c0003t0002 a0001c0004t0001 a0001c0004t0006 a0001c0005t0001 a0001c0005t0006 a0001c0005t0010 a0001c0006t0002 a0001c0006t0004 a0001c0007t0003 a0001c0007t0004 a0001c0009t0014 a0001c0021t0002 a0001c0025t0001 a0003c0008t0013 a0005c0012t0009 a0006c0028t0001 a0008c0026t0017	a0001c0001t0001g0033 a0001c0001t0001g0050 a0001c0001t0003g0008 others(32): Show a0001c0001t0001g0033 a0001c0001t0001g0050 a0001c0001t0003g0008 a0001c0001t0003g0095 a0001c0001t0005g0054 a0001c0001t0005g0098 a0001c0001t0005g0115 a0001c0001t0008g0053 a0001c0001t0009g0052 a0001c0002t0001g0029 a0001c0002t0001g0108 a0001c0002t0001g0110 a0001c0002t0002g0035 a0001c0002t0002g0102 a0001c0002t0003g0114 a0001c0003t0001g0116 a0001c0003t0002g0072 a0001c0003t0002g0107 a0001c0004t0001g0097 a0001c0004t0001g0106 a0001c0004t0006g0068 a0001c0005t0001g0096 a0001c0005t0006g0010 a0001c0005t0010g0001 a0001c0006t0002g0026 a0001c0006t0004g0004 a0001c0007t0003g0034 a0001c0007t0004g0066 a0001c0009t0014g0039 a0001c0021t0002g0025 a0001c0025t0001g0100 a0003c0008t0013g0109 a0005c0012t0009g0093 a0006c0028t0001g0023 a0008c0026t0017g0047	35	116	0.3017	-3	c.-89 others(22): Show c.-89+28815_-89+28817delTTT	CNTN4	ENSG00000144619.15	transcript	ENST00000418658.6	protein_coding	3/24	INFO_REALIGN_3_PRIME	chr3	TogoVar
CNTN4_chr3_2093866_3062959	2444208	TAAA TAAA	T T	intron_variant intron_variant	MODIFIER	HG00140.hp2 HG00438.hp2 HG00642.hp1 others(12): Show HG00140.hp2 HG00438.hp2 HG00642.hp1 HG00738.hp1 HG01243.hp2 HG01256.hp2 HG01257.hp2 HG01258.hp1 HG01891.hp2 HG01978.hp1 HG02132.hp2 HG02523.hp1 HG03540.hp2 HG03831.hp2 HG03927.hp1	a0001 a0008 a0001 a0008	a0001c0001 a0001c0002 a0001c0003 others(5): Show a0001c0001 a0001c0002 a0001c0003 a0001c0004 a0001c0005 a0001c0006 a0001c0020 a0008c0026	a0001c0001t0001 a0001c0001t0002 a0001c0001t0005 others(9): Show a0001c0001t0001 a0001c0001t0002 a0001c0001t0005 a0001c0002t0002 a0001c0002t0007 a0001c0003t0001 a0001c0004t0001 a0001c0004t0006 a0001c0005t0001 a0001c0006t0003 a0001c0020t0002 a0008c0026t0017	a0001c0001t0001g0050 a0001c0001t0002g0028 a0001c0001t0002g0055 others(12): Show a0001c0001t0001g0050 a0001c0001t0002g0028 a0001c0001t0002g0055 a0001c0001t0005g0098 a0001c0002t0002g0078 a0001c0002t0002g0102 a0001c0002t0007g0087 a0001c0002t0007g0112 a0001c0003t0001g0014 a0001c0004t0001g0097 a0001c0004t0006g0044 a0001c0005t0001g0096 a0001c0006t0003g0069 a0001c0020t0002g0082 a0008c0026t0017g0047	15	116	0.1293	-3	c.-89 others(24): Show c.-89+104990_-89+104992delAAA	CNTN4	ENSG00000144619.15	transcript	ENST00000418658.6	protein_coding	3/24	INFO_REALIGN_3_PRIME	chr3	TogoVar
CNTN4_chr3_2093866_3062959	2449614	CAAA CAAA	C C	intron_variant intron_variant	MODIFIER	HG00140.hp1 HG00738.hp2 HG01261.hp1 others(11): Show HG00140.hp1 HG00738.hp2 HG01261.hp1 HG01361.hp1 HG01978.hp2 HG02897.hp1 HG02897.hp2 HG03041.hp1 HG03130.hp2 HG03139.hp1 HG03453.hp2 HG03471.hp2 HG03540.hp1 HG03831.hp1	a0001 a0003 a0004 a0001 a0003 a0004	a0001c0001 a0001c0002 a0001c0003 others(4): Show a0001c0001 a0001c0002 a0001c0003 a0001c0004 a0001c0006 a0003c0008 a0004c0011	a0001c0001t0001 a0001c0001t0003 a0001c0001t0005 others(9): Show a0001c0001t0001 a0001c0001t0003 a0001c0001t0005 a0001c0002t0001 a0001c0002t0003 a0001c0002t0005 a0001c0003t0001 a0001c0003t0002 a0001c0004t0002 a0001c0006t0002 a0003c0008t0013 a0004c0011t0003	a0001c0001t0001g0033 a0001c0001t0001g0099 a0001c0001t0003g0006 others(11): Show a0001c0001t0001g0033 a0001c0001t0001g0099 a0001c0001t0003g0006 a0001c0001t0005g0054 a0001c0002t0001g0021 a0001c0002t0001g0108 a0001c0002t0003g0024 a0001c0002t0005g0002 a0001c0003t0001g0037 a0001c0003t0002g0073 a0001c0004t0002g0022 a0001c0006t0002g0060 a0003c0008t0013g0109 a0004c0011t0003g0065	14	116	0.1207	-3	c.-89 others(24): Show c.-89+110399_-89+110401delAAA	CNTN4	ENSG00000144619.15	transcript	ENST00000418658.6	protein_coding	3/24	INFO_REALIGN_3_PRIME	chr3	TogoVar
CNTN4_chr3_2093866_3062959	2472153	CAAA CAAA	C C	intron_variant intron_variant	MODIFIER	HG02257.hp2 HG02559.hp2 HG02572.hp2 others(4): Show HG02257.hp2 HG02559.hp2 HG02572.hp2 HG02615.hp2 HG02717.hp1 HG02886.hp2 HG02897.hp1	a0001 a0001	a0001c0001 a0001c0002 a0001c0006 a0001c0001 a0001c0002 a0001c0006	a0001c0001t0002 a0001c0001t0003 a0001c0001t0008 others(3): Show a0001c0001t0002 a0001c0001t0003 a0001c0001t0008 a0001c0002t0005 a0001c0002t0007 a0001c0006t0002	a0001c0001t0002g0030 a0001c0001t0003g0101 a0001c0001t0008g0089 others(4): Show a0001c0001t0002g0030 a0001c0001t0003g0101 a0001c0001t0008g0089 a0001c0002t0005g0002 a0001c0002t0005g0003 a0001c0002t0007g0009 a0001c0006t0002g0051	7	116	0.0603	-3	c.-88 others(22): Show c.-88-99247_-88-99245delAAA	CNTN4	ENSG00000144619.15	transcript	ENST00000418658.6	protein_coding	3/24	INFO_REALIGN_3_PRIME	chr3	TogoVar
CNTN4_chr3_2093866_3062959	2504649	ATAT ATAT	A A	intron_variant intron_variant	MODIFIER	HG02451.hp2 HG03041.hp1 HG02451.hp2 HG03041.hp1	a0001 a0001	a0001c0001 a0001c0004 a0001c0001 a0001c0004	a0001c0001t0001 a0001c0004t0006 a0001c0001t0001 a0001c0004t0006	a0001c0001t0001g0033 a0001c0004t0006g0068 a0001c0001t0001g0033 a0001c0004t0006g0068	2	116	0.0172	-3	c.-88 others(22): Show c.-88-66762_-88-66760delATT	CNTN4	ENSG00000144619.15	transcript	ENST00000418658.6	protein_coding	3/24	INFO_REALIGN_3_PRIME	chr3	TogoVar
CNTN4_chr3_2093866_3062959	2580493	TTAC TTAC	T T	intron_variant intron_variant	MODIFIER	HG03654.hp1 HG03831.hp1 HG03654.hp1 HG03831.hp1	a0001 a0001	a0001c0003 a0001c0004 a0001c0003 a0001c0004	a0001c0003t0003 a0001c0004t0002 a0001c0003t0003 a0001c0004t0002	a0001c0003t0003g0015 a0001c0004t0002g0022 a0001c0003t0003g0015 a0001c0004t0002g0022	2	116	0.0172	-3	c.55+ others(18): Show c.55+8937_55+8939delACT	CNTN4	ENSG00000144619.15	transcript	ENST00000418658.6	protein_coding	4/24	INFO_REALIGN_3_PRIME	chr3	TogoVar
CNTN4_chr3_2093866_3062959	2584697	CAAA CAAA	C C	intron_variant intron_variant	MODIFIER	HG00140.hp1 HG01169.hp2 HG01243.hp1 others(2): Show HG00140.hp1 HG01169.hp2 HG01243.hp1 HG02886.hp2 NA20300.hp2	a0001 a0001	a0001c0001 a0001c0002 a0001c0001 a0001c0002	a0001c0001t0001 a0001c0001t0002 a0001c0001t0008 others(1): Show a0001c0001t0001 a0001c0001t0002 a0001c0001t0008 a0001c0002t0006	a0001c0001t0001g0049 a0001c0001t0001g0099 a0001c0001t0002g0030 others(2): Show a0001c0001t0001g0049 a0001c0001t0001g0099 a0001c0001t0002g0030 a0001c0001t0008g0053 a0001c0002t0006g0071	5	116	0.0431	-3	c.55+ others(20): Show c.55+13161_55+13163delAAA	CNTN4	ENSG00000144619.15	transcript	ENST00000418658.6	protein_coding	4/24	INFO_REALIGN_3_PRIME	chr3	TogoVar
CNTN4_chr3_2093866_3062959	2600002	ATTC ATTC	A A	intron_variant intron_variant	MODIFIER	HG02559.hp1 HG03209.hp2 HG02559.hp1 HG03209.hp2	a0001 a0001	a0001c0005 a0001c0005	a0001c0005t0001 a0001c0005t0006 a0001c0005t0001 a0001c0005t0006	a0001c0005t0001g0104 a0001c0005t0006g0032 a0001c0005t0001g0104 a0001c0005t0006g0032	2	116	0.0172	-3	c.55+ others(20): Show c.55+28450_55+28452delCTT	CNTN4	ENSG00000144619.15	transcript	ENST00000418658.6	protein_coding	4/24	INFO_REALIGN_3_PRIME	chr3	TogoVar
CNTN4_chr3_2093866_3062959	2620013	AAGT AAGT	A A	intron_variant intron_variant	MODIFIER	HG00140.hp1 HG00140.hp2 HG00438.hp1 others(113): Show HG00140.hp1 HG00140.hp2 HG00438.hp1 HG00438.hp2 HG00639.hp1 HG00639.hp2 HG00642.hp1 HG00642.hp2 HG00735.hp1 HG00735.hp2 HG00738.hp1 HG00738.hp2 HG01169.hp1 HG01169.hp2 HG01175.hp1 HG01175.hp2 HG01243.hp1 HG01243.hp2 HG01256.hp1 HG01256.hp2 HG01257.hp1 HG01257.hp2 HG01258.hp1 HG01258.hp2 HG01261.hp1 HG01261.hp2 HG01361.hp1 HG01361.hp2 HG01884.hp1 HG01884.hp2 HG01891.hp1 HG01891.hp2 HG01978.hp1 HG01978.hp2 HG02074.hp1 HG02074.hp2 HG02132.hp1 HG02132.hp2 HG02165.hp1 HG02165.hp2 HG02257.hp1 HG02257.hp2 HG02258.hp1 HG02258.hp2 HG02451.hp1 HG02451.hp2 HG02486.hp1 HG02486.hp2 HG02523.hp1 HG02523.hp2 HG02559.hp1 HG02559.hp2 HG02572.hp1 HG02572.hp2 HG02602.hp1 HG02602.hp2 HG02615.hp1 HG02615.hp2 HG02622.hp1 HG02622.hp2 HG02647.hp1 HG02647.hp2 HG02683.hp1 HG02683.hp2 HG02717.hp1 HG02717.hp2 HG02738.hp1 HG02738.hp2 HG02809.hp1 HG02809.hp2 HG02818.hp1 HG02818.hp2 HG02886.hp1 HG02886.hp2 HG02897.hp1 HG02897.hp2 HG02965.hp1 HG02965.hp2 HG03041.hp1 HG03041.hp2 HG03130.hp1 HG03130.hp2 HG03139.hp1 HG03139.hp2 HG03209.hp1 HG03209.hp2 HG03239.hp1 HG03239.hp2 HG03453.hp1 HG03453.hp2 HG03471.hp1 HG03471.hp2 HG03486.hp1 HG03486.hp2 HG03516.hp1 HG03516.hp2 HG03540.hp1 HG03540.hp2 HG03654.hp1 HG03654.hp2 HG03831.hp1 HG03831.hp2 HG03927.hp1 HG03927.hp2 HG04184.hp1 HG04184.hp2 HG06807.hp1 HG06807.hp2 NA18906.hp1 NA18906.hp2 NA18990.hp1 NA18990.hp2 NA19043.hp1 NA19043.hp2 NA20300.hp1 NA20300.hp2	a0001 a0002 a0003 others(6): Show a0001 a0002 a0003 a0004 a0005 a0006 a0007 a0008 a0009	a0001c0001 a0001c0002 a0001c0003 others(25): Show a0001c0001 a0001c0002 a0001c0003 a0001c0004 a0001c0005 a0001c0006 a0001c0007 a0001c0009 a0001c0010 a0001c0013 a0001c0020 a0001c0021 a0001c0022 a0001c0023 a0001c0024 a0001c0025 a0002c0014 a0002c0015 a0002c0016 a0002c0017 a0003c0008 a0003c0019 a0004c0011 a0005c0012 a0006c0028 a0007c0018 a0008c0026 a0009c0027	a0001c0001t0001 a0001c0001t0002 a0001c0001t0003 others(53): Show a0001c0001t0001 a0001c0001t0002 a0001c0001t0003 a0001c0001t0004 a0001c0001t0005 a0001c0001t0008 a0001c0001t0009 a0001c0002t0001 a0001c0002t0002 a0001c0002t0003 a0001c0002t0004 a0001c0002t0005 a0001c0002t0006 a0001c0002t0007 a0001c0002t0012 a0001c0003t0001 a0001c0003t0002 a0001c0003t0003 a0001c0003t0006 a0001c0003t0011 a0001c0004t0001 a0001c0004t0002 a0001c0004t0006 a0001c0005t0001 a0001c0005t0006 a0001c0005t0009 a0001c0005t0010 a0001c0006t0002 a0001c0006t0003 a0001c0006t0004 a0001c0007t0003 a0001c0007t0004 a0001c0007t0016 a0001c0009t0004 a0001c0009t0014 a0001c0010t0003 a0001c0013t0007 a0001c0020t0002 a0001c0021t0002 a0001c0022t0003 a0001c0023t0004 a0001c0024t0015 a0001c0025t0001 a0002c0014t0001 a0002c0015t0003 a0002c0016t0003 a0002c0017t0008 a0003c0008t0001 a0003c0008t0013 a0003c0019t0002 a0004c0011t0003 a0005c0012t0009 a0006c0028t0001 a0007c0018t0003 a0008c0026t0017 a0009c0027t0001	a0001c0001t0001g0012 a0001c0001t0001g0033 a0001c0001t0001g0049 others(113): Show a0001c0001t0001g0012 a0001c0001t0001g0033 a0001c0001t0001g0049 a0001c0001t0001g0050 a0001c0001t0001g0059 a0001c0001t0001g0099 a0001c0001t0002g0028 a0001c0001t0002g0030 a0001c0001t0002g0055 a0001c0001t0002g0074 a0001c0001t0002g0086 a0001c0001t0003g0006 a0001c0001t0003g0008 a0001c0001t0003g0058 a0001c0001t0003g0095 a0001c0001t0003g0101 a0001c0001t0004g0042 a0001c0001t0004g0081 a0001c0001t0005g0018 a0001c0001t0005g0019 a0001c0001t0005g0054 a0001c0001t0005g0098 a0001c0001t0005g0115 a0001c0001t0008g0043 a0001c0001t0008g0053 a0001c0001t0008g0089 a0001c0001t0009g0052 a0001c0002t0001g0021 a0001c0002t0001g0027 a0001c0002t0001g0029 a0001c0002t0001g0038 a0001c0002t0001g0088 a0001c0002t0001g0108 a0001c0002t0001g0110 a0001c0002t0002g0035 a0001c0002t0002g0063 a0001c0002t0002g0078 a0001c0002t0002g0102 a0001c0002t0003g0024 a0001c0002t0003g0114 a0001c0002t0004g0017 a0001c0002t0005g0002 a0001c0002t0005g0003 a0001c0002t0006g0071 a0001c0002t0007g0009 a0001c0002t0007g0080 a0001c0002t0007g0087 a0001c0002t0007g0112 a0001c0002t0012g0013 a0001c0003t0001g0014 a0001c0003t0001g0037 a0001c0003t0001g0045 a0001c0003t0001g0075 a0001c0003t0001g0094 a0001c0003t0001g0116 a0001c0003t0002g0061 a0001c0003t0002g0072 a0001c0003t0002g0073 a0001c0003t0002g0107 a0001c0003t0003g0015 a0001c0003t0003g0046 a0001c0003t0003g0070 a0001c0003t0006g0040 a0001c0003t0011g0113 a0001c0004t0001g0020 a0001c0004t0001g0036 a0001c0004t0001g0097 a0001c0004t0001g0106 a0001c0004t0002g0022 a0001c0004t0002g0048 a0001c0004t0002g0064 a0001c0004t0002g0076 a0001c0004t0006g0044 a0001c0004t0006g0068 a0001c0005t0001g0090 a0001c0005t0001g0092 a0001c0005t0001g0096 a0001c0005t0001g0104 a0001c0005t0006g0010 a0001c0005t0006g0032 a0001c0005t0009g0091 a0001c0005t0010g0001 a0001c0005t0010g0085 a0001c0006t0002g0026 a0001c0006t0002g0051 a0001c0006t0002g0060 a0001c0006t0003g0069 a0001c0006t0004g0004 a0001c0007t0003g0034 a0001c0007t0004g0066 a0001c0007t0016g0105 a0001c0009t0004g0005 a0001c0009t0014g0039 a0001c0010t0003g0011 a0001c0010t0003g0077 a0001c0013t0007g0056 a0001c0020t0002g0082 a0001c0021t0002g0025 a0001c0022t0003g0083 a0001c0023t0004g0041 a0001c0024t0015g0057 a0001c0025t0001g0100 a0002c0014t0001g0016 a0002c0015t0003g0103 a0002c0016t0003g0079 a0002c0017t0008g0067 a0003c0008t0001g0084 a0003c0008t0013g0109 a0003c0019t0002g0031 a0004c0011t0003g0065 a0004c0011t0003g0111 a0005c0012t0009g0093 a0006c0028t0001g0023 a0007c0018t0003g0062 a0008c0026t0017g0047 a0009c0027t0001g0007	116	116	1.0000	-3	c.55+ others(20): Show c.55+48463_55+48465delGTA	CNTN4	ENSG00000144619.15	transcript	ENST00000418658.6	protein_coding	4/24	INFO_REALIGN_3_PRIME	chr3	TogoVar
CNTN4_chr3_2093866_3062959	2634676	GAAA GAAA	G G	intron_variant intron_variant	MODIFIER	HG01891.hp1 HG02257.hp2 HG02258.hp1 others(2): Show HG01891.hp1 HG02257.hp2 HG02258.hp1 HG02451.hp1 NA18906.hp1	a0001 a0002 a0009 a0001 a0002 a0009	a0001c0001 a0001c0002 a0001c0006 others(2): Show a0001c0001 a0001c0002 a0001c0006 a0002c0015 a0009c0027	a0001c0001t0008 a0001c0002t0001 a0001c0006t0002 others(2): Show a0001c0001t0008 a0001c0002t0001 a0001c0006t0002 a0002c0015t0003 a0009c0027t0001	a0001c0001t0008g0089 a0001c0002t0001g0029 a0001c0006t0002g0026 others(2): Show a0001c0001t0008g0089 a0001c0002t0001g0029 a0001c0006t0002g0026 a0002c0015t0003g0103 a0009c0027t0001g0007	5	116	0.0431	-3	c.55+ others(20): Show c.55+63128_55+63130delAAA	CNTN4	ENSG00000144619.15	transcript	ENST00000418658.6	protein_coding	4/24	INFO_REALIGN_3_PRIME	chr3	TogoVar
CNTN4_chr3_2093866_3062959	2639542	ACTT ACTT	A A	intron_variant intron_variant	MODIFIER	HG03139.hp1 HG03453.hp1 HG03486.hp1 HG03139.hp1 HG03453.hp1 HG03486.hp1	a0001 a0003 a0001 a0003	a0001c0002 a0001c0023 a0003c0008 a0001c0002 a0001c0023 a0003c0008	a0001c0002t0001 a0001c0023t0004 a0003c0008t0013 a0001c0002t0001 a0001c0023t0004 a0003c0008t0013	a0001c0002t0001g0027 a0001c0023t0004g0041 a0003c0008t0013g0109 a0001c0002t0001g0027 a0001c0023t0004g0041 a0003c0008t0013g0109	3	116	0.0259	-3	c.55+ others(20): Show c.55+67987_55+67989delTCT	CNTN4	ENSG00000144619.15	transcript	ENST00000418658.6	protein_coding	4/24	INFO_REALIGN_3_PRIME	chr3	TogoVar
CNTN4_chr3_2093866_3062959	2661809	CAAA CAAA	C C	intron_variant intron_variant	MODIFIER	HG00735.hp1 HG00735.hp2 HG00738.hp2 others(32): Show HG00735.hp1 HG00735.hp2 HG00738.hp2 HG01243.hp2 HG01884.hp2 HG01978.hp2 HG02074.hp2 HG02258.hp2 HG02451.hp1 HG02451.hp2 HG02572.hp2 HG02602.hp2 HG02622.hp1 HG02717.hp2 HG02738.hp1 HG02738.hp2 HG02897.hp1 HG02965.hp1 HG03139.hp1 HG03139.hp2 HG03209.hp1 HG03239.hp2 HG03453.hp1 HG03486.hp1 HG03516.hp1 HG03540.hp1 HG03540.hp2 HG03654.hp2 HG03831.hp1 HG03831.hp2 HG04184.hp1 HG06807.hp1 NA18906.hp2 NA19043.hp1 NA20300.hp1	a0001 a0002 a0003 others(3): Show a0001 a0002 a0003 a0005 a0006 a0009	a0001c0001 a0001c0002 a0001c0003 others(12): Show a0001c0001 a0001c0002 a0001c0003 a0001c0004 a0001c0005 a0001c0006 a0001c0007 a0001c0009 a0001c0021 a0001c0023 a0002c0014 a0003c0008 a0005c0012 a0006c0028 a0009c0027	a0001c0001t0003 a0001c0001t0005 a0001c0001t0008 others(25): Show a0001c0001t0003 a0001c0001t0005 a0001c0001t0008 a0001c0001t0009 a0001c0002t0001 a0001c0002t0002 a0001c0002t0003 a0001c0002t0005 a0001c0002t0007 a0001c0002t0012 a0001c0003t0002 a0001c0003t0003 a0001c0004t0001 a0001c0004t0002 a0001c0004t0006 a0001c0005t0001 a0001c0006t0004 a0001c0007t0003 a0001c0007t0004 a0001c0007t0016 a0001c0009t0014 a0001c0021t0002 a0001c0023t0004 a0002c0014t0001 a0003c0008t0013 a0005c0012t0009 a0006c0028t0001 a0009c0027t0001	a0001c0001t0003g0095 a0001c0001t0005g0054 a0001c0001t0005g0115 others(32): Show a0001c0001t0003g0095 a0001c0001t0005g0054 a0001c0001t0005g0115 a0001c0001t0008g0043 a0001c0001t0009g0052 a0001c0002t0001g0027 a0001c0002t0001g0038 a0001c0002t0001g0088 a0001c0002t0002g0078 a0001c0002t0002g0102 a0001c0002t0003g0024 a0001c0002t0005g0002 a0001c0002t0005g0003 a0001c0002t0007g0080 a0001c0002t0007g0087 a0001c0002t0012g0013 a0001c0003t0002g0072 a0001c0003t0002g0073 a0001c0003t0003g0070 a0001c0004t0001g0036 a0001c0004t0002g0022 a0001c0004t0006g0068 a0001c0005t0001g0090 a0001c0006t0004g0004 a0001c0007t0003g0034 a0001c0007t0004g0066 a0001c0007t0016g0105 a0001c0009t0014g0039 a0001c0021t0002g0025 a0001c0023t0004g0041 a0002c0014t0001g0016 a0003c0008t0013g0109 a0005c0012t0009g0093 a0006c0028t0001g0023 a0009c0027t0001g0007	35	116	0.3017	-3	c.56- others(20): Show c.56-74384_56-74382delAAA	CNTN4	ENSG00000144619.15	transcript	ENST00000418658.6	protein_coding	4/24	INFO_REALIGN_3_PRIME	chr3	TogoVar
CNTN4_chr3_2093866_3062959	2702088	TTTG TTTG	T T	intron_variant intron_variant	MODIFIER	HG01169.hp2 HG02738.hp2 HG01169.hp2 HG02738.hp2	a0001 a0001	a0001c0001 a0001c0003 a0001c0001 a0001c0003	a0001c0001t0001 a0001c0003t0002 a0001c0001t0001 a0001c0003t0002	a0001c0001t0001g0049 a0001c0003t0002g0072 a0001c0001t0001g0049 a0001c0003t0002g0072	2	116	0.0172	-3	c.56- others(20): Show c.56-34121_56-34119delGTT	CNTN4	ENSG00000144619.15	transcript	ENST00000418658.6	protein_coding	4/24	INFO_REALIGN_3_PRIME	chr3	TogoVar
CNTN4_chr3_2093866_3062959	2704296	CAAA CAAA	C C	intron_variant intron_variant	MODIFIER	HG01243.hp1 HG02165.hp2 HG02602.hp2 others(2): Show HG01243.hp1 HG02165.hp2 HG02602.hp2 HG02818.hp1 HG02897.hp2	a0001 a0002 a0001 a0002	a0001c0001 a0001c0003 a0001c0007 others(1): Show a0001c0001 a0001c0003 a0001c0007 a0002c0017	a0001c0001t0003 a0001c0001t0008 a0001c0003t0011 others(2): Show a0001c0001t0003 a0001c0001t0008 a0001c0003t0011 a0001c0007t0004 a0002c0017t0008	a0001c0001t0003g0006 a0001c0001t0008g0053 a0001c0003t0011g0113 others(2): Show a0001c0001t0003g0006 a0001c0001t0008g0053 a0001c0003t0011g0113 a0001c0007t0004g0066 a0002c0017t0008g0067	5	116	0.0431	-3	c.56- others(20): Show c.56-31896_56-31894delAAA	CNTN4	ENSG00000144619.15	transcript	ENST00000418658.6	protein_coding	4/24	INFO_REALIGN_3_PRIME	chr3	TogoVar
CNTN4_chr3_2093866_3062959	2744348	TAAG TAAG	T T	intron_variant intron_variant	MODIFIER	HG01169.hp2 HG01261.hp2 HG01978.hp1 others(6): Show HG01169.hp2 HG01261.hp2 HG01978.hp1 HG02074.hp1 HG02602.hp1 HG02683.hp1 HG03831.hp2 NA18990.hp1 NA20300.hp2	a0001 a0004 a0001 a0004	a0001c0001 a0001c0002 a0001c0003 others(3): Show a0001c0001 a0001c0002 a0001c0003 a0001c0004 a0001c0009 a0004c0011	a0001c0001t0001 a0001c0002t0002 a0001c0002t0006 others(5): Show a0001c0001t0001 a0001c0002t0002 a0001c0002t0006 a0001c0003t0001 a0001c0003t0003 a0001c0004t0006 a0001c0009t0004 a0004c0011t0003	a0001c0001t0001g0049 a0001c0002t0002g0063 a0001c0002t0002g0078 others(6): Show a0001c0001t0001g0049 a0001c0002t0002g0063 a0001c0002t0002g0078 a0001c0002t0006g0071 a0001c0003t0001g0116 a0001c0003t0003g0046 a0001c0004t0006g0044 a0001c0009t0004g0005 a0004c0011t0003g0111	9	116	0.0776	-3	c.183 others(20): Show c.183-1172_183-1170delAGA	CNTN4	ENSG00000144619.15	transcript	ENST00000418658.6	protein_coding	5/24	INFO_REALIGN_3_PRIME	chr3	TogoVar
CNTN4_chr3_2093866_3062959	2762937	CTTT CTTT	C C	intron_variant intron_variant	MODIFIER	HG00140.hp1 HG00639.hp2 HG00642.hp2 others(37): Show HG00140.hp1 HG00639.hp2 HG00642.hp2 HG00735.hp2 HG01175.hp1 HG01175.hp2 HG01243.hp1 HG01256.hp2 HG01257.hp1 HG01257.hp2 HG01258.hp1 HG01261.hp1 HG01884.hp1 HG01891.hp2 HG01978.hp2 HG02074.hp2 HG02258.hp1 HG02451.hp2 HG02486.hp2 HG02572.hp2 HG02615.hp2 HG02683.hp1 HG02683.hp2 HG02717.hp2 HG02809.hp1 HG02886.hp1 HG02897.hp2 HG02965.hp1 HG03041.hp1 HG03130.hp1 HG03139.hp1 HG03139.hp2 HG03239.hp1 HG03239.hp2 HG03471.hp1 HG03486.hp1 HG03831.hp1 HG03927.hp2 HG06807.hp2 NA19043.hp2	a0001 a0002 a0003 others(1): Show a0001 a0002 a0003 a0007	a0001c0001 a0001c0002 a0001c0003 others(11): Show a0001c0001 a0001c0002 a0001c0003 a0001c0004 a0001c0005 a0001c0006 a0001c0007 a0001c0009 a0001c0010 a0001c0023 a0001c0025 a0002c0016 a0003c0008 a0007c0018	a0001c0001t0001 a0001c0001t0002 a0001c0001t0003 others(25): Show a0001c0001t0001 a0001c0001t0002 a0001c0001t0003 a0001c0001t0005 a0001c0001t0008 a0001c0002t0001 a0001c0002t0002 a0001c0002t0003 a0001c0002t0005 a0001c0002t0007 a0001c0003t0001 a0001c0003t0002 a0001c0003t0006 a0001c0004t0001 a0001c0004t0002 a0001c0004t0006 a0001c0005t0009 a0001c0005t0010 a0001c0006t0002 a0001c0006t0003 a0001c0007t0016 a0001c0009t0014 a0001c0010t0003 a0001c0023t0004 a0001c0025t0001 a0002c0016t0003 a0003c0008t0013 a0007c0018t0003	a0001c0001t0001g0033 a0001c0001t0001g0099 a0001c0001t0002g0055 others(37): Show a0001c0001t0001g0033 a0001c0001t0001g0099 a0001c0001t0002g0055 a0001c0001t0002g0086 a0001c0001t0003g0006 a0001c0001t0003g0058 a0001c0001t0003g0101 a0001c0001t0005g0098 a0001c0001t0005g0115 a0001c0001t0008g0043 a0001c0001t0008g0053 a0001c0002t0001g0088 a0001c0002t0002g0035 a0001c0002t0002g0063 a0001c0002t0003g0114 a0001c0002t0005g0003 a0001c0002t0007g0080 a0001c0003t0001g0037 a0001c0003t0001g0094 a0001c0003t0002g0061 a0001c0003t0002g0073 a0001c0003t0002g0107 a0001c0003t0006g0040 a0001c0004t0001g0097 a0001c0004t0001g0106 a0001c0004t0002g0022 a0001c0004t0002g0064 a0001c0004t0006g0068 a0001c0005t0009g0091 a0001c0005t0010g0085 a0001c0006t0002g0026 a0001c0006t0003g0069 a0001c0007t0016g0105 a0001c0009t0014g0039 a0001c0010t0003g0077 a0001c0023t0004g0041 a0001c0025t0001g0100 a0002c0016t0003g0079 a0003c0008t0013g0109 a0007c0018t0003g0062	40	116	0.3448	-3	c.358 others(22): Show c.358+17261_358+17263delTTT	CNTN4	ENSG00000144619.15	transcript	ENST00000418658.6	protein_coding	6/24	INFO_REALIGN_3_PRIME	chr3	TogoVar
CNTN4_chr3_2093866_3062959	2842505	TCTC TCTC	T T	intron_variant intron_variant	MODIFIER	HG00140.hp2 HG00639.hp1 HG00639.hp2 others(20): Show HG00140.hp2 HG00639.hp1 HG00639.hp2 HG00738.hp1 HG01175.hp2 HG01256.hp1 HG01258.hp2 HG01261.hp2 HG02074.hp1 HG02074.hp2 HG02132.hp2 HG02165.hp2 HG02486.hp2 HG02523.hp2 HG02615.hp2 HG02683.hp2 HG02738.hp1 HG02809.hp1 HG02965.hp2 HG03239.hp1 HG03654.hp2 HG03831.hp2 NA18990.hp1	a0001 a0004 a0006 others(2): Show a0001 a0004 a0006 a0007 a0008	a0001c0001 a0001c0002 a0001c0003 others(8): Show a0001c0001 a0001c0002 a0001c0003 a0001c0004 a0001c0005 a0001c0007 a0001c0009 a0004c0011 a0006c0028 a0007c0018 a0008c0026	a0001c0001t0002 a0001c0001t0003 a0001c0001t0005 others(15): Show a0001c0001t0002 a0001c0001t0003 a0001c0001t0005 a0001c0002t0001 a0001c0002t0002 a0001c0002t0007 a0001c0003t0001 a0001c0003t0002 a0001c0003t0006 a0001c0003t0011 a0001c0004t0002 a0001c0005t0001 a0001c0007t0016 a0001c0009t0004 a0004c0011t0003 a0006c0028t0001 a0007c0018t0003 a0008c0026t0017	a0001c0001t0002g0028 a0001c0001t0003g0058 a0001c0001t0003g0101 others(20): Show a0001c0001t0002g0028 a0001c0001t0003g0058 a0001c0001t0003g0101 a0001c0001t0005g0018 a0001c0001t0005g0019 a0001c0002t0001g0038 a0001c0002t0002g0078 a0001c0002t0007g0112 a0001c0003t0001g0045 a0001c0003t0001g0094 a0001c0003t0001g0116 a0001c0003t0002g0061 a0001c0003t0006g0040 a0001c0003t0011g0113 a0001c0004t0002g0064 a0001c0004t0002g0076 a0001c0005t0001g0092 a0001c0007t0016g0105 a0001c0009t0004g0005 a0004c0011t0003g0111 a0006c0028t0001g0023 a0007c0018t0003g0062 a0008c0026t0017g0047	23	116	0.1983	-3	c.454 others(22): Show c.454+22927_454+22929delCCT	CNTN4	ENSG00000144619.15	transcript	ENST00000418658.6	protein_coding	7/24	INFO_REALIGN_3_PRIME	chr3	TogoVar
CNTN4_chr3_2093866_3062959	2853191	AAAG AAAG	A A	intron_variant intron_variant	MODIFIER	HG00639.hp1 HG00735.hp2 HG00738.hp2 others(18): Show HG00639.hp1 HG00735.hp2 HG00738.hp2 HG01169.hp2 HG01884.hp1 HG01884.hp2 HG02486.hp2 HG02523.hp2 HG02559.hp1 HG02615.hp2 HG02683.hp1 HG02717.hp2 HG02738.hp1 HG02897.hp1 HG03041.hp1 HG03130.hp2 HG03139.hp1 HG03516.hp1 NA18906.hp1 NA19043.hp2 NA20300.hp1	a0001 a0002 a0003 others(1): Show a0001 a0002 a0003 a0007	a0001c0001 a0001c0002 a0001c0003 others(7): Show a0001c0001 a0001c0002 a0001c0003 a0001c0004 a0001c0005 a0001c0009 a0001c0025 a0002c0015 a0003c0008 a0007c0018	a0001c0001t0001 a0001c0001t0002 a0001c0001t0003 others(15): Show a0001c0001t0001 a0001c0001t0002 a0001c0001t0003 a0001c0001t0005 a0001c0001t0008 a0001c0001t0009 a0001c0002t0001 a0001c0002t0002 a0001c0002t0005 a0001c0002t0012 a0001c0003t0001 a0001c0004t0002 a0001c0005t0001 a0001c0009t0014 a0001c0025t0001 a0002c0015t0003 a0003c0008t0013 a0007c0018t0003	a0001c0001t0001g0033 a0001c0001t0001g0049 a0001c0001t0002g0086 others(18): Show a0001c0001t0001g0033 a0001c0001t0001g0049 a0001c0001t0002g0086 a0001c0001t0003g0101 a0001c0001t0005g0054 a0001c0001t0008g0043 a0001c0001t0009g0052 a0001c0002t0001g0038 a0001c0002t0001g0108 a0001c0002t0002g0063 a0001c0002t0005g0002 a0001c0002t0012g0013 a0001c0003t0001g0045 a0001c0004t0002g0076 a0001c0005t0001g0090 a0001c0005t0001g0104 a0001c0009t0014g0039 a0001c0025t0001g0100 a0002c0015t0003g0103 a0003c0008t0013g0109 a0007c0018t0003g0062	21	116	0.1810	-3	c.455 others(22): Show c.455-13558_455-13556delGAA	CNTN4	ENSG00000144619.15	transcript	ENST00000418658.6	protein_coding	7/24	INFO_REALIGN_3_PRIME	chr3	TogoVar
CNTN4_chr3_2093866_3062959	2854259	TTTC TTTC	T T	intron_variant intron_variant	MODIFIER	HG02257.hp1 HG02451.hp1 HG03041.hp2 others(1): Show HG02257.hp1 HG02451.hp1 HG03041.hp2 HG03139.hp2	a0001 a0009 a0001 a0009	a0001c0002 a0001c0005 a0001c0022 others(1): Show a0001c0002 a0001c0005 a0001c0022 a0009c0027	a0001c0002t0001 a0001c0005t0010 a0001c0022t0003 others(1): Show a0001c0002t0001 a0001c0005t0010 a0001c0022t0003 a0009c0027t0001	a0001c0002t0001g0088 a0001c0005t0010g0001 a0001c0022t0003g0083 others(1): Show a0001c0002t0001g0088 a0001c0005t0010g0001 a0001c0022t0003g0083 a0009c0027t0001g0007	4	116	0.0345	-3	c.455 others(22): Show c.455-12484_455-12482delCTT	CNTN4	ENSG00000144619.15	transcript	ENST00000418658.6	protein_coding	7/24	INFO_REALIGN_3_PRIME	chr3	TogoVar
CNTN4_chr3_2093866_3062959	2881059	CAAG CAAG	C C	intron_variant intron_variant	MODIFIER	HG00639.hp1 HG01169.hp1 HG01243.hp1 others(15): Show HG00639.hp1 HG01169.hp1 HG01243.hp1 HG01884.hp1 HG01891.hp2 HG02074.hp1 HG02132.hp1 HG02132.hp2 HG02451.hp2 HG02572.hp2 HG02602.hp1 HG02615.hp2 HG02886.hp2 HG02897.hp2 HG03041.hp1 HG03654.hp1 HG03831.hp2 NA19043.hp2	a0001 a0008 a0001 a0008	a0001c0001 a0001c0002 a0001c0003 others(6): Show a0001c0001 a0001c0002 a0001c0003 a0001c0004 a0001c0005 a0001c0006 a0001c0009 a0001c0025 a0008c0026	a0001c0001t0001 a0001c0001t0002 a0001c0001t0003 others(11): Show a0001c0001t0001 a0001c0001t0002 a0001c0001t0003 a0001c0001t0008 a0001c0002t0002 a0001c0002t0005 a0001c0003t0001 a0001c0003t0003 a0001c0004t0006 a0001c0005t0006 a0001c0006t0003 a0001c0009t0004 a0001c0025t0001 a0008c0026t0017	a0001c0001t0001g0012 a0001c0001t0001g0033 a0001c0001t0002g0030 others(15): Show a0001c0001t0001g0012 a0001c0001t0001g0033 a0001c0001t0002g0030 a0001c0001t0002g0086 a0001c0001t0003g0006 a0001c0001t0003g0101 a0001c0001t0008g0053 a0001c0002t0002g0078 a0001c0002t0005g0003 a0001c0003t0001g0045 a0001c0003t0003g0015 a0001c0003t0003g0046 a0001c0004t0006g0068 a0001c0005t0006g0010 a0001c0006t0003g0069 a0001c0009t0004g0005 a0001c0025t0001g0100 a0008c0026t0017g0047	18	116	0.1552	-3	c.653 others(20): Show c.653-2077_653-2075delGAA	CNTN4	ENSG00000144619.15	transcript	ENST00000418658.6	protein_coding	8/24	INFO_REALIGN_3_PRIME	chr3	TogoVar
CNTN4_chr3_2093866_3062959	2900586	TTTA TTTA	T T	intron_variant intron_variant	MODIFIER	HG01256.hp1 HG01258.hp2 NA18990.hp2 HG01256.hp1 HG01258.hp2 NA18990.hp2	a0001 a0001	a0001c0001 a0001c0003 a0001c0001 a0001c0003	a0001c0001t0005 a0001c0003t0001 a0001c0001t0005 a0001c0003t0001	a0001c0001t0005g0018 a0001c0001t0005g0019 a0001c0003t0001g0075 a0001c0001t0005g0018 a0001c0001t0005g0019 a0001c0003t0001g0075	3	116	0.0259	-3	c.941 others(16): Show c.941-94_941-92delTAT	CNTN4	ENSG00000144619.15	transcript	ENST00000418658.6	protein_coding	10/24	INFO_REALIGN_3_PRIME	chr3	TogoVar
CNTN4_chr3_2093866_3062959	2983213	CAAA CAAA	C C	intron_variant intron_variant	MODIFIER	HG00735.hp2 HG01256.hp1 HG01256.hp2 others(2): Show HG00735.hp2 HG01256.hp1 HG01256.hp2 HG01884.hp1 HG02717.hp2	a0001 a0001	a0001c0001 a0001c0009 a0001c0025 a0001c0001 a0001c0009 a0001c0025	a0001c0001t0002 a0001c0001t0005 a0001c0001t0008 others(2): Show a0001c0001t0002 a0001c0001t0005 a0001c0001t0008 a0001c0009t0014 a0001c0025t0001	a0001c0001t0002g0055 a0001c0001t0005g0019 a0001c0001t0008g0043 others(2): Show a0001c0001t0002g0055 a0001c0001t0005g0019 a0001c0001t0008g0043 a0001c0009t0014g0039 a0001c0025t0001g0100	5	116	0.0431	-3	c.135 others(22): Show c.1359-5092_1359-5090delAAA	CNTN4	ENSG00000144619.15	transcript	ENST00000418658.6	protein_coding	13/24	INFO_REALIGN_3_PRIME	chr3	TogoVar
CNTN4_chr3_2093866_3062959	3011877	CATG CATG	C C	intron_variant intron_variant	MODIFIER	HG00140.hp1 HG00140.hp2 HG00735.hp1 others(18): Show HG00140.hp1 HG00140.hp2 HG00735.hp1 HG01256.hp2 HG01257.hp1 HG01258.hp1 HG01978.hp1 HG02074.hp2 HG02132.hp1 HG02165.hp1 HG02451.hp2 HG02523.hp2 HG02615.hp1 HG02615.hp2 HG02717.hp2 HG03041.hp1 HG03239.hp2 HG03516.hp2 HG03831.hp1 NA19043.hp1 NA19043.hp2	a0001 a0001	a0001c0001 a0001c0004 a0001c0007 a0001c0001 a0001c0004 a0001c0007	a0001c0001t0001 a0001c0001t0002 a0001c0001t0003 others(7): Show a0001c0001t0001 a0001c0001t0002 a0001c0001t0003 a0001c0001t0004 a0001c0001t0005 a0001c0001t0008 a0001c0004t0001 a0001c0004t0002 a0001c0004t0006 a0001c0007t0016	a0001c0001t0001g0012 a0001c0001t0001g0033 a0001c0001t0001g0099 others(18): Show a0001c0001t0001g0012 a0001c0001t0001g0033 a0001c0001t0001g0099 a0001c0001t0002g0028 a0001c0001t0002g0055 a0001c0001t0002g0086 a0001c0001t0003g0095 a0001c0001t0003g0101 a0001c0001t0004g0042 a0001c0001t0004g0081 a0001c0001t0005g0115 a0001c0001t0008g0043 a0001c0004t0001g0020 a0001c0004t0001g0036 a0001c0004t0001g0097 a0001c0004t0001g0106 a0001c0004t0002g0022 a0001c0004t0002g0076 a0001c0004t0006g0044 a0001c0004t0006g0068 a0001c0007t0016g0105	21	116	0.1810	-3	c.148 others(24): Show c.1487-14215_1487-14213delATG	CNTN4	ENSG00000144619.15	transcript	ENST00000418658.6	protein_coding	14/24	INFO_REALIGN_3_PRIME	chr3	TogoVar

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