regionname | pos | ref | alt | annotation | impact | samples | ahapids | achapids | acthapids | actghapids | ac | an | af | len | hgvs_c | hgvs_p | genename | geneid | featuretype | featureid | transcript_biotype | rank | cdna cdna pos length
|
cds cds pos length
|
aa aa pos length
|
distance | status | chr | external |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
COL25A1_chr4_108803725_109307658 | 109020506 | TGGG | T | intron_variant | MODIFIER | HG00140.hp2 HG00639.hp2 HG00735.hp1 others(16): Show |
a0001 | a0001c0001a0001c0002a0001c0004others(2): Show | a0001c0001t0001a0001c0001t0002a0001c0001t0003others(9): Show | a0001c0001t0001g0041a0001c0001t0001g0062a0001c0001t0002g0085others(16): Show | 19 | 130 | 0.1462 | -3 | c.421 others(22): Show |
COL25A1 | ENSG00000188517.17 | transcript | ENST00000399132.6 | protein_coding | 5/37 | chr4 | TogoVar | ||||||
COL25A1_chr4_108803725_109307658 | 109030754 | TTTG | T | intron_variant | MODIFIER | HG00639.hp2 HG00735.hp1 HG01258.hp2 others(8): Show |
a0001 | a0001c0001a0001c0002a0001c0003others(1): Show | a0001c0001t0001a0001c0001t0006a0001c0001t0019others(5): Show | a0001c0001t0001g0041a0001c0001t0001g0062a0001c0001t0006g0049others(8): Show | 11 | 130 | 0.0846 | -3 | c.420 others(22): Show |
COL25A1 | ENSG00000188517.17 | transcript | ENST00000399132.6 | protein_coding | 5/37 | chr4 | TogoVar | ||||||
COL25A1_chr4_108803725_109307658 | 109051750 | TATA | T | intron_variant | MODIFIER | HG01109.hp1 HG02145.hp1 HG02970.hp1 others(1): Show |
a0001 | a0001c0001a0001c0002a0001c0003 | a0001c0001t0002a0001c0002t0001a0001c0003t0001others(1): Show | a0001c0001t0002g0088a0001c0002t0001g0125a0001c0003t0001g0053others(1): Show | 4 | 130 | 0.0308 | -3 | c.368 others(20): Show |
COL25A1 | ENSG00000188517.17 | transcript | ENST00000399132.6 | protein_coding | 3/37 | chr4 | TogoVar | ||||||
COL25A1_chr4_108803725_109307658 | 109079441 | ATGT | A | intron_variant | MODIFIER | HG02280.hp1 HG02717.hp2 |
a0001 | a0001c0001 | a0001c0001t0001a0001c0001t0005 | a0001c0001t0001g0059a0001c0001t0005g0077 | 2 | 130 | 0.0154 | -3 | c.368 others(22): Show |
COL25A1 | ENSG00000188517.17 | transcript | ENST00000399132.6 | protein_coding | 3/37 | chr4 | TogoVar | ||||||
COL25A1_chr4_108803725_109307658 | 109093079 | TTCC | T | intron_variant | MODIFIER | HG02145.hp2 HG02451.hp1 HG02922.hp2 |
a0001 | a0001c0001a0001c0005 | a0001c0001t0001a0001c0005t0002 | a0001c0001t0001g0037a0001c0005t0002g0123a0001c0005t0002g0124 | 3 | 130 | 0.0231 | -3 | c.368 others(22): Show |
COL25A1 | ENSG00000188517.17 | transcript | ENST00000399132.6 | protein_coding | 3/37 | chr4 | TogoVar | ||||||
COL25A1_chr4_108803725_109307658 | 109105584 | CTTG | C | intron_variant | MODIFIER | HG01243.hp1 HG01981.hp2 HG02071.hp1 others(20): Show |
a0001a0002 | a0001c0001a0001c0002a0001c0003others(1): Show | a0001c0001t0001a0001c0001t0002a0001c0001t0006others(11): Show | a0001c0001t0001g0041a0001c0001t0001g0080a0001c0001t0001g0099others(20): Show | 23 | 130 | 0.1769 | -3 | c.368 others(22): Show |
COL25A1 | ENSG00000188517.17 | transcript | ENST00000399132.6 | protein_coding | 3/37 | chr4 | TogoVar | ||||||
COL25A1_chr4_108803725_109307658 | 109117099 | CAAT | C | intron_variant | MODIFIER | HG00558.hp2 HG01258.hp2 HG01993.hp2 others(3): Show |
a0001 | a0001c0001a0001c0002a0001c0004 | a0001c0001t0001a0001c0001t0004a0001c0001t0028others(2): Show | a0001c0001t0001g0103a0001c0001t0001g0114a0001c0001t0004g0008others(3): Show | 6 | 130 | 0.0462 | -3 | c.368 others(22): Show |
COL25A1 | ENSG00000188517.17 | transcript | ENST00000399132.6 | protein_coding | 3/37 | chr4 | TogoVar | ||||||
COL25A1_chr4_108803725_109307658 | 109135024 | CAAA | C | intron_variant | MODIFIER | HG00140.hp1 HG00558.hp1 HG00639.hp1 others(54): Show |
a0001a0002 | a0001c0001a0001c0002a0001c0003others(3): Show | a0001c0001t0001a0001c0001t0002a0001c0001t0003others(28): Show | a0001c0001t0001g0037a0001c0001t0001g0041a0001c0001t0001g0074others(54): Show | 57 | 130 | 0.4385 | -3 | c.368 others(22): Show |
COL25A1 | ENSG00000188517.17 | transcript | ENST00000399132.6 | protein_coding | 3/37 | chr4 | TogoVar | ||||||
COL25A1_chr4_108803725_109307658 | 109144817 | CATT | C | intron_variant | MODIFIER | HG00140.hp2 HG01884.hp1 HG02109.hp2 others(19): Show |
a0001 | a0001c0001a0001c0002a0001c0003others(2): Show | a0001c0001t0001a0001c0001t0002a0001c0001t0014others(6): Show | a0001c0001t0001g0059a0001c0001t0001g0062a0001c0001t0001g0069others(19): Show | 22 | 130 | 0.1692 | -3 | c.368 others(22): Show |
COL25A1 | ENSG00000188517.17 | transcript | ENST00000399132.6 | protein_coding | 3/37 | chr4 | TogoVar | ||||||
COL25A1_chr4_108803725_109307658 | 109231924 | AAAG | A | intron_variant | MODIFIER | HG02976.hp2 HG03209.hp2 HG03453.hp1 |
a0001 | a0001c0001a0001c0003 | a0001c0001t0006a0001c0001t0011a0001c0003t0004 | a0001c0001t0006g0072a0001c0001t0011g0047a0001c0003t0004g0001 | 3 | 130 | 0.0231 | -3 | c.367 others(22): Show |
COL25A1 | ENSG00000188517.17 | transcript | ENST00000399132.6 | protein_coding | 3/37 | chr4 | TogoVar | ||||||
COL25A1_chr4_108803725_109307658 | 109232353 | CAAG | C | intron_variant | MODIFIER | HG00140.hp2 HG00323.hp1 HG00639.hp1 others(74): Show |
a0001a0002 | a0001c0001a0001c0002a0001c0003others(4): Show | a0001c0001t0001a0001c0001t0002a0001c0001t0003others(31): Show | a0001c0001t0001g0037a0001c0001t0001g0041a0001c0001t0001g0059others(74): Show | 77 | 130 | 0.5923 | -3 | c.367 others(22): Show |
COL25A1 | ENSG00000188517.17 | transcript | ENST00000399132.6 | protein_coding | 3/37 | chr4 | TogoVar | ||||||
COL25A1_chr4_108803725_109307658 | 109263130 | AAAC | A | intron_variant | MODIFIER | HG00140.hp2 HG00323.hp1 HG00639.hp1 others(68): Show |
a0001a0002 | a0001c0001a0001c0002a0001c0003others(3): Show | a0001c0001t0001a0001c0001t0002a0001c0001t0003others(29): Show | a0001c0001t0001g0037a0001c0001t0001g0041a0001c0001t0001g0062others(68): Show | 71 | 130 | 0.5462 | -3 | c.367 others(22): Show |
COL25A1 | ENSG00000188517.17 | transcript | ENST00000399132.6 | protein_coding | 3/37 | chr4 | TogoVar | ||||||
COL25A1_chr4_108803725_109307658 | 109297862 | CTTT | C | intron_variant | MODIFIER | HG00323.hp2 HG00558.hp2 HG00741.hp1 others(40): Show |
a0001 | a0001c0001a0001c0002a0001c0003others(2): Show | a0001c0001t0001a0001c0001t0002a0001c0001t0005others(13): Show | a0001c0001t0001g0074a0001c0001t0001g0079a0001c0001t0001g0080others(40): Show | 43 | 130 | 0.3308 | -3 | c.367 others(20): Show |
COL25A1 | ENSG00000188517.17 | transcript | ENST00000399132.6 | protein_coding | 3/37 | chr4 | TogoVar | ||||||
COL26A1_chr7_101357875_101564024 | 101366474 | ATTT | A | intron_variant | MODIFIER | HG00741.hp1 HG01074.hp1 HG01346.hp2 others(9): Show |
a0001a0002 | a0001c0002a0001c0012a0001c0013others(1): Show | a0001c0002t0003a0001c0002t0006a0001c0002t0016others(3): Show | a0001c0002t0003g0029a0001c0002t0003g0031a0001c0002t0003g0056others(9): Show | 12 | 174 | 0.0690 | -3 | c.158 others(20): Show |
COL26A1 | ENSG00000160963.14 | transcript | ENST00000313669.12 | protein_coding | 1/12 | INFO_REALIGN_3_PRIME | chr7 | TogoVar | |||||
COL26A1_chr7_101357875_101564024 | 101367671 | GAAA | G | intron_variant | MODIFIER | HG00140.hp1 HG00140.hp2 HG00280.hp2 others(83): Show |
a0001a0002a0003others(1): Show | a0001c0001a0001c0005a0001c0008others(5): Show | a0001c0001t0001a0001c0001t0002a0001c0001t0005others(20): Show | a0001c0001t0001g0114a0001c0001t0002g0061a0001c0001t0002g0062others(83): Show | 86 | 174 | 0.4943 | -3 | c.158 others(20): Show |
COL26A1 | ENSG00000160963.14 | transcript | ENST00000313669.12 | protein_coding | 1/12 | INFO_REALIGN_3_PRIME | chr7 | TogoVar | |||||
COL26A1_chr7_101357875_101564024 | 101368640 | CATG | C | intron_variant | MODIFIER | HG01884.hp2 HG02615.hp2 HG02809.hp1 others(4): Show |
a0001a0002 | a0001c0001a0001c0005a0002c0004 | a0001c0001t0002a0001c0005t0002a0001c0005t0005others(3): Show | a0001c0001t0002g0174a0001c0005t0002g0149a0001c0005t0005g0144others(4): Show | 7 | 174 | 0.0402 | -3 | c.158 others(20): Show |
COL26A1 | ENSG00000160963.14 | transcript | ENST00000313669.12 | protein_coding | 1/12 | chr7 | TogoVar | ||||||
COL26A1_chr7_101357875_101564024 | 101376137 | CAAA | C | intron_variant | MODIFIER | HG00280.hp1 HG00558.hp1 HG00597.hp1 others(45): Show |
a0001a0002a0005others(1): Show | a0001c0002a0001c0009a0001c0012others(5): Show | a0001c0002t0003a0001c0002t0006a0001c0002t0016others(11): Show | a0001c0002t0003g0015a0001c0002t0003g0021a0001c0002t0003g0023others(45): Show | 48 | 174 | 0.2759 | -3 | c.158 others(22): Show |
COL26A1 | ENSG00000160963.14 | transcript | ENST00000313669.12 | protein_coding | 1/12 | INFO_REALIGN_3_PRIME | chr7 | TogoVar | |||||
COL26A1_chr7_101357875_101564024 | 101376577 | TCTC | T | intron_variant | MODIFIER | HG02965.hp2 NA20129.hp1 |
a0002 | a0002c0007 | a0002c0007t0004 | a0002c0007t0004g0007a0002c0007t0004g0008 | 2 | 174 | 0.0115 | -3 | c.158 others(22): Show |
COL26A1 | ENSG00000160963.14 | transcript | ENST00000313669.12 | protein_coding | 1/12 | INFO_REALIGN_3_PRIME | chr7 | TogoVar | |||||
COL26A1_chr7_101357875_101564024 | 101387543 | TTTC | T | intron_variant | MODIFIER | HG00621.hp2 HG02109.hp2 HG02809.hp2 others(14): Show |
a0001a0002a0003 | a0001c0001a0001c0002a0001c0005others(3): Show | a0001c0001t0001a0001c0001t0002a0001c0001t0008others(8): Show | a0001c0001t0001g0114a0001c0001t0002g0111a0001c0001t0002g0113others(14): Show | 17 | 174 | 0.0977 | -3 | c.158 others(22): Show |
COL26A1 | ENSG00000160963.14 | transcript | ENST00000313669.12 | protein_coding | 1/12 | INFO_REALIGN_3_PRIME | chr7 | TogoVar | |||||
COL26A1_chr7_101357875_101564024 | 101390148 | GTTT | G | intron_variant | MODIFIER | HG00597.hp1 HG01109.hp1 HG01243.hp1 others(18): Show |
a0001a0002a0003 | a0001c0001a0001c0002a0001c0005others(5): Show | a0001c0001t0002a0001c0001t0008a0001c0001t0011others(11): Show | a0001c0001t0002g0064a0001c0001t0002g0084a0001c0001t0002g0136others(18): Show | 21 | 174 | 0.1207 | -3 | c.158 others(22): Show |
COL26A1 | ENSG00000160963.14 | transcript | ENST00000313669.12 | protein_coding | 1/12 | INFO_REALIGN_3_PRIME | chr7 | TogoVar | |||||
COL26A1_chr7_101357875_101564024 | 101399819 | AAAC | A | intron_variant | MODIFIER | HG00673.hp2 NA19060.hp1 |
a0001a0002 | a0001c0001a0002c0003 | a0001c0001t0002a0002c0003t0001 | a0001c0001t0002g0093a0002c0003t0001g0102 | 2 | 174 | 0.0115 | -3 | c.159 others(22): Show |
COL26A1 | ENSG00000160963.14 | transcript | ENST00000313669.12 | protein_coding | 1/12 | INFO_REALIGN_3_PRIME | chr7 | TogoVar | |||||
COL26A1_chr7_101357875_101564024 | 101401581 | AAAG | A | intron_variant | MODIFIER | HG00140.hp1 HG00280.hp2 HG01074.hp2 others(35): Show |
a0001a0002a0003others(1): Show | a0001c0001a0001c0005a0001c0008others(7): Show | a0001c0001t0002a0001c0001t0005a0001c0001t0008others(13): Show | a0001c0001t0002g0084a0001c0001t0002g0132a0001c0001t0002g0136others(35): Show | 38 | 174 | 0.2184 | -3 | c.159 others(22): Show |
COL26A1 | ENSG00000160963.14 | transcript | ENST00000313669.12 | protein_coding | 1/12 | chr7 | TogoVar | ||||||
COL26A1_chr7_101357875_101564024 | 101401717 | AGAG | A | intron_variant | MODIFIER | HG02647.hp2 HG02818.hp1 HG02965.hp1 others(2): Show |
a0001a0002 | a0001c0005a0001c0014a0002c0003others(1): Show | a0001c0005t0002a0001c0005t0008a0001c0014t0009others(2): Show | a0001c0005t0002g0149a0001c0005t0008g0128a0001c0014t0009g0117others(2): Show | 5 | 174 | 0.0287 | -3 | c.159 others(22): Show |
COL26A1 | ENSG00000160963.14 | transcript | ENST00000313669.12 | protein_coding | 1/12 | INFO_REALIGN_3_PRIME | chr7 | TogoVar | |||||
COL26A1_chr7_101357875_101564024 | 101410433 | AAAG | A | intron_variant | MODIFIER | HG00140.hp1 HG00280.hp2 HG01074.hp2 others(16): Show |
a0001a0002 | a0001c0001a0001c0008a0001c0013others(2): Show | a0001c0001t0002a0001c0001t0005a0001c0008t0007others(4): Show | a0001c0001t0002g0084a0001c0001t0002g0136a0001c0001t0005g0059others(16): Show | 19 | 174 | 0.1092 | -3 | c.159 others(20): Show |
COL26A1 | ENSG00000160963.14 | transcript | ENST00000313669.12 | protein_coding | 1/12 | INFO_REALIGN_3_PRIME | chr7 | TogoVar | |||||
COL26A1_chr7_101357875_101564024 | 101412644 | CAAA | C | intron_variant | MODIFIER | HG01243.hp2 HG02615.hp2 HG02809.hp1 others(5): Show |
a0001a0002a0007 | a0001c0001a0001c0002a0001c0005others(3): Show | a0001c0001t0002a0001c0002t0003a0001c0005t0005others(4): Show | a0001c0001t0002g0132a0001c0002t0003g0048a0001c0005t0005g0106others(5): Show | 8 | 174 | 0.0460 | -3 | c.159 others(20): Show |
COL26A1 | ENSG00000160963.14 | transcript | ENST00000313669.12 | protein_coding | 1/12 | INFO_REALIGN_3_PRIME | chr7 | TogoVar | |||||
COL26A1_chr7_101357875_101564024 | 101422372 | GAAA | G | intron_variant | MODIFIER | HG00140.hp2 HG00280.hp1 HG00323.hp1 others(103): Show |
a0001a0002a0003others(3): Show | a0001c0001a0001c0002a0001c0005others(16): Show | a0001c0001t0001a0001c0001t0002a0001c0001t0008others(36): Show | a0001c0001t0001g0114a0001c0001t0002g0064a0001c0001t0002g0084others(103): Show | 106 | 174 | 0.6092 | -3 | c.281 others(20): Show |
COL26A1 | ENSG00000160963.14 | transcript | ENST00000313669.12 | protein_coding | 2/12 | INFO_REALIGN_3_PRIME | chr7 | TogoVar | |||||
COL26A1_chr7_101357875_101564024 | 101455041 | CTTT | C | intron_variant | MODIFIER | HG01884.hp1 HG01884.hp2 HG02615.hp2 others(13): Show |
a0001a0002a0003 | a0001c0001a0001c0002a0001c0005others(4): Show | a0001c0001t0002a0001c0001t0011a0001c0002t0006others(7): Show | a0001c0001t0002g0174a0001c0001t0011g0108a0001c0002t0006g0010others(13): Show | 16 | 174 | 0.0920 | -3 | c.385 others(20): Show |
COL26A1 | ENSG00000160963.14 | transcript | ENST00000313669.12 | protein_coding | 3/12 | INFO_REALIGN_3_PRIME | chr7 | TogoVar | |||||
COL26A1_chr7_101357875_101564024 | 101457912 | TTTG | T | intron_variant | MODIFIER | HG00140.hp1 HG01074.hp2 HG01109.hp2 others(25): Show |
a0001a0002a0003 | a0001c0001a0001c0005a0001c0008others(9): Show | a0001c0001t0002a0001c0001t0005a0001c0005t0002others(11): Show | a0001c0001t0002g0064a0001c0001t0002g0084a0001c0001t0002g0132others(25): Show | 28 | 174 | 0.1609 | -3 | c.385 others(22): Show |
COL26A1 | ENSG00000160963.14 | transcript | ENST00000313669.12 | protein_coding | 3/12 | chr7 | TogoVar | ||||||
COL26A1_chr7_101357875_101564024 | 101465691 | CAAA | C | intron_variant | MODIFIER | HG00621.hp2 HG00673.hp1 HG01167.hp2 others(10): Show |
a0001a0002 | a0001c0001a0001c0002a0001c0005others(1): Show | a0001c0001t0002a0001c0001t0005a0001c0001t0008others(4): Show | a0001c0001t0002g0074a0001c0001t0002g0093a0001c0001t0002g0098others(10): Show | 13 | 174 | 0.0747 | -3 | c.385 others(22): Show |
COL26A1 | ENSG00000160963.14 | transcript | ENST00000313669.12 | protein_coding | 3/12 | INFO_REALIGN_3_PRIME | chr7 | TogoVar | |||||
COL26A1_chr7_101357875_101564024 | 101468772 | ACTT | A | intron_variant | MODIFIER | HG03516.hp2 NA20300.hp1 |
a0003 | a0003c0010a0003c0018 | a0003c0010t0022a0003c0018t0019 | a0003c0010t0022g0166a0003c0018t0019g0005 | 2 | 174 | 0.0115 | -3 | c.385 others(22): Show |
COL26A1 | ENSG00000160963.14 | transcript | ENST00000313669.12 | protein_coding | 3/12 | INFO_REALIGN_3_PRIME | chr7 | TogoVar | |||||
COL26A1_chr7_101357875_101564024 | 101489751 | TGTC | T | intron_variant | MODIFIER | HG00140.hp2 HG01884.hp2 HG03041.hp1 others(2): Show |
a0001a0002 | a0001c0001a0001c0005a0002c0003others(1): Show | a0001c0001t0002a0001c0005t0005a0001c0005t0023others(2): Show | a0001c0001t0002g0154a0001c0005t0005g0144a0001c0005t0023g0116others(2): Show | 5 | 174 | 0.0287 | -3 | c.385 others(22): Show |
COL26A1 | ENSG00000160963.14 | transcript | ENST00000313669.12 | protein_coding | 3/12 | chr7 | TogoVar | ||||||
COL26A1_chr7_101357875_101564024 | 101489767 | TTTC | T | intron_variant | MODIFIER | HG01346.hp2 HG01978.hp1 NA18942.hp1 others(2): Show |
a0001a0002 | a0001c0001a0001c0002a0002c0006 | a0001c0001t0002a0001c0002t0003a0002c0006t0004 | a0001c0001t0002g0113a0001c0001t0002g0124a0001c0002t0003g0029others(2): Show | 5 | 174 | 0.0287 | -3 | c.385 others(22): Show |
COL26A1 | ENSG00000160963.14 | transcript | ENST00000313669.12 | protein_coding | 3/12 | INFO_REALIGN_3_PRIME | chr7 | TogoVar | |||||
COL26A1_chr7_101357875_101564024 | 101489775 | TTTC | T | intron_variant | MODIFIER | HG00438.hp1 HG00597.hp2 HG01261.hp1 |
a0001 | a0001c0001a0001c0002 | a0001c0001t0002a0001c0001t0015a0001c0002t0003 | a0001c0001t0002g0096a0001c0001t0015g0127a0001c0002t0003g0021 | 3 | 174 | 0.0172 | -3 | c.385 others(22): Show |
COL26A1 | ENSG00000160963.14 | transcript | ENST00000313669.12 | protein_coding | 3/12 | INFO_REALIGN_3_PRIME | chr7 | TogoVar | |||||
COL26A1_chr7_101357875_101564024 | 101489918 | CTTG | C | intron_variant | MODIFIER | HG02615.hp1 NA20129.hp1 NA21309.hp1 |
a0002 | a0002c0004a0002c0007 | a0002c0004t0001a0002c0004t0030a0002c0007t0004 | a0002c0004t0001g0156a0002c0004t0030g0170a0002c0007t0004g0008 | 3 | 174 | 0.0172 | -3 | c.385 others(22): Show |
COL26A1 | ENSG00000160963.14 | transcript | ENST00000313669.12 | protein_coding | 3/12 | INFO_REALIGN_3_PRIME | chr7 | TogoVar | |||||
COL26A1_chr7_101357875_101564024 | 101503861 | TCTC | T | intron_variant | MODIFIER | HG03130.hp1 HG03516.hp2 NA20300.hp1 |
a0001a0003 | a0001c0001a0003c0010a0003c0018 | a0001c0001t0011a0003c0010t0022a0003c0018t0019 | a0001c0001t0011g0108a0003c0010t0022g0166a0003c0018t0019g0005 | 3 | 174 | 0.0172 | -3 | c.386 others(22): Show |
COL26A1 | ENSG00000160963.14 | transcript | ENST00000313669.12 | protein_coding | 3/12 | INFO_REALIGN_3_PRIME | chr7 | TogoVar | |||||
COL26A1_chr7_101357875_101564024 | 101512996 | TTTA | T | intron_variant | MODIFIER | HG00140.hp2 HG00438.hp2 HG00609.hp1 others(47): Show |
a0001a0002a0003others(3): Show | a0001c0001a0001c0002a0001c0005others(11): Show | a0001c0001t0001a0001c0001t0002a0001c0001t0008others(22): Show | a0001c0001t0001g0114a0001c0001t0002g0062a0001c0001t0002g0111others(47): Show | 50 | 174 | 0.2874 | -3 | c.386 others(22): Show |
COL26A1 | ENSG00000160963.14 | transcript | ENST00000313669.12 | protein_coding | 3/12 | INFO_REALIGN_3_PRIME | chr7 | TogoVar | |||||
COL26A1_chr7_101357875_101564024 | 101525171 | CTTT | C | intron_variant | MODIFIER | HG01081.hp2 HG01168.hp2 HG02451.hp2 others(6): Show |
a0001a0002 | a0001c0001a0001c0005a0001c0008others(3): Show | a0001c0001t0002a0001c0001t0011a0001c0005t0029others(4): Show | a0001c0001t0002g0132a0001c0001t0011g0108a0001c0005t0029g0092others(6): Show | 9 | 174 | 0.0517 | -3 | c.386 others(20): Show |
COL26A1 | ENSG00000160963.14 | transcript | ENST00000313669.12 | protein_coding | 3/12 | INFO_REALIGN_3_PRIME | chr7 | TogoVar | |||||
COL26A1_chr7_101357875_101564024 | 101546401 | ATTT | A | intron_variant | MODIFIER | HG01257.hp2 HG02258.hp2 HG02280.hp1 others(6): Show |
a0001a0002 | a0001c0001a0001c0014a0002c0003others(2): Show | a0001c0001t0002a0001c0001t0005a0001c0001t0011others(5): Show | a0001c0001t0002g0062a0001c0001t0002g0174a0001c0001t0005g0079others(6): Show | 9 | 174 | 0.0517 | -3 | c.857 others(18): Show |
COL26A1 | ENSG00000160963.14 | transcript | ENST00000313669.12 | protein_coding | 7/12 | INFO_REALIGN_3_PRIME | chr7 | TogoVar | |||||
COL27A1_chr9_114150537_114317511 | 114160155 | ATTT | A | intron_variant | MODIFIER | HG00280.hp2 HG00733.hp2 HG01069.hp1 others(10): Show |
a0012a0013a0026others(3): Show | a0012c0155a0012c0158a0012c0161others(9): Show | a0012c0155t0021a0012c0158t0002a0012c0161t0001others(10): Show | a0012c0155t0021g0167a0012c0158t0002g0223a0012c0161t0001g0170others(10): Show | 13 | 308 | 0.0422 | -3 | c.63- others(18): Show |
COL27A1 | ENSG00000196739.15 | transcript | ENST00000356083.8 | protein_coding | 1/60 | INFO_REALIGN_3_PRIME | chr9 | TogoVar | |||||
COL27A1_chr9_114150537_114317511 | 114179832 | CTTT | C | intron_variant | MODIFIER | HG01978.hp2 HG02027.hp2 HG02074.hp2 others(13): Show |
a0001a0002a0003others(8): Show | a0001c0016a0001c0046a0001c0148others(12): Show | a0001c0016t0001a0001c0046t0003a0001c0148t0001others(12): Show | a0001c0016t0001g0247a0001c0046t0003g0220a0001c0046t0003g0242others(13): Show | 16 | 308 | 0.0520 | -3 | c.196 others(22): Show |
COL27A1 | ENSG00000196739.15 | transcript | ENST00000356083.8 | protein_coding | 4/60 | INFO_REALIGN_3_PRIME | chr9 | TogoVar | |||||
COL27A1_chr9_114150537_114317511 | 114218951 | GTTT | G | intron_variant | MODIFIER | HG00323.hp1 HG00738.hp1 HG01123.hp1 others(28): Show |
a0001a0002a0003others(13): Show | a0001c0003a0001c0016a0001c0017others(25): Show | a0001c0003t0003a0001c0016t0003a0001c0016t0012others(27): Show | a0001c0003t0003g0243a0001c0016t0003g0097a0001c0016t0012g0145others(28): Show | 31 | 308 | 0.1007 | -3 | c.236 others(20): Show |
COL27A1 | ENSG00000196739.15 | transcript | ENST00000356083.8 | protein_coding | 12/60 | INFO_REALIGN_3_PRIME | chr9 | TogoVar | |||||
COL27A1_chr9_114150537_114317511 | 114234212 | TAAA | T | intron_variant | MODIFIER | HG01099.hp1 HG01109.hp2 HG01169.hp1 others(22): Show |
a0001a0002a0003others(14): Show | a0001c0010a0001c0016a0001c0045others(20): Show | a0001c0010t0002a0001c0016t0003a0001c0045t0003others(21): Show | a0001c0010t0002g0132a0001c0016t0003g0097a0001c0045t0003g0059others(22): Show | 25 | 308 | 0.0812 | -3 | c.256 others(22): Show |
COL27A1 | ENSG00000196739.15 | transcript | ENST00000356083.8 | protein_coding | 16/60 | INFO_REALIGN_3_PRIME | chr9 | TogoVar | |||||
COL27A1_chr9_114150537_114317511 | 114236906 | CAGG | C | intron_variant | MODIFIER | HG01884.hp2 HG03209.hp1 NA20129.hp2 others(1): Show |
a0009a0017a0028others(1): Show | a0009c0039a0017c0024a0028c0065others(1): Show | a0009c0039t0008a0017c0024t0003a0028c0065t0006others(1): Show | a0009c0039t0008g0055a0017c0024t0003g0174a0028c0065t0006g0012others(1): Show | 4 | 308 | 0.0130 | -3 | c.262 others(18): Show |
COL27A1 | ENSG00000196739.15 | transcript | ENST00000356083.8 | protein_coding | 17/60 | INFO_REALIGN_3_PRIME | chr9 | TogoVar | |||||
COL27A1_chr9_114150537_114317511 | 114245148 | GTTT | G | intron_variant | MODIFIER | HG00438.hp2 HG00673.hp1 HG02040.hp2 others(11): Show |
a0001a0002a0003others(6): Show | a0001c0017a0001c0143a0002c0001others(10): Show | a0001c0017t0003a0001c0143t0003a0002c0001t0003others(11): Show | a0001c0017t0003g0146a0001c0143t0003g0087a0002c0001t0003g0114others(11): Show | 14 | 308 | 0.0455 | -3 | c.293 others(20): Show |
COL27A1 | ENSG00000196739.15 | transcript | ENST00000356083.8 | protein_coding | 23/60 | INFO_REALIGN_3_PRIME | chr9 | TogoVar | |||||
COL27A1_chr9_114150537_114317511 | 114278260 | GTGA | G | intron_variant | MODIFIER | HG02723.hp1 HG02723.hp2 HG03471.hp2 others(1): Show |
a0001a0002a0004others(1): Show | a0001c0016a0002c0008a0004c0090others(1): Show | a0001c0016t0001a0002c0008t0003a0004c0090t0001others(1): Show | a0001c0016t0001g0205a0002c0008t0003g0212a0004c0090t0001g0239others(1): Show | 4 | 308 | 0.0130 | -3 | c.371 others(22): Show |
COL27A1 | ENSG00000196739.15 | transcript | ENST00000356083.8 | protein_coding | 37/60 | INFO_REALIGN_3_PRIME | chr9 | TogoVar | |||||
COL27A1_chr9_114150537_114317511 | 114278485 | ATGG | A | intron_variant | MODIFIER | HG02647.hp1 NA19043.hp1 NA20129.hp2 |
a0009a0048 | a0009c0039a0009c0140a0048c0081 | a0009c0039t0008a0009c0140t0019a0048c0081t0006 | a0009c0039t0008g0055a0009c0140t0019g0209a0048c0081t0006g0071 | 3 | 308 | 0.0097 | -3 | c.371 others(22): Show |
COL27A1 | ENSG00000196739.15 | transcript | ENST00000356083.8 | protein_coding | 37/60 | INFO_REALIGN_3_PRIME | chr9 | TogoVar | |||||
COL27A1_chr9_114150537_114317511 | 114278514 | AGTG | A | intron_variant | MODIFIER | HG01109.hp1 NA19043.hp1 NA19240.hp1 others(1): Show |
a0005a0009a0014 | a0005c0030a0009c0039a0009c0140others(1): Show | a0005c0030t0003a0009c0039t0008a0009c0140t0019others(1): Show | a0005c0030t0003g0025a0009c0039t0008g0055a0009c0140t0019g0209others(1): Show | 4 | 308 | 0.0130 | -3 | c.371 others(22): Show |
COL27A1 | ENSG00000196739.15 | transcript | ENST00000356083.8 | protein_coding | 37/60 | INFO_REALIGN_3_PRIME | chr9 | TogoVar | |||||
COL27A1_chr9_114150537_114317511 | 114294082 | CAAA | C | intron_variant | MODIFIER | HG00099.hp2 HG00438.hp2 HG00544.hp1 others(166): Show |
a0001a0002a0003others(40): Show | a0001c0002a0001c0003a0001c0010others(109): Show | a0001c0002t0025a0001c0003t0003a0001c0003t0004others(136): Show | a0001c0002t0025g0111a0001c0003t0003g0107a0001c0003t0003g0115others(166): Show | 169 | 308 | 0.5487 | -3 | c.458 others(22): Show |
COL27A1 | ENSG00000196739.15 | transcript | ENST00000356083.8 | protein_coding | 49/60 | INFO_REALIGN_3_PRIME | chr9 | TogoVar | |||||
COL27A1_chr9_114150537_114317511 | 114302726 | CAAA | C | intron_variant | MODIFIER | HG00642.hp2 HG00738.hp1 HG01069.hp2 others(20): Show |
a0001a0002a0003others(9): Show | a0001c0002a0001c0003a0001c0045others(18): Show | a0001c0002t0002a0001c0003t0002a0001c0045t0002others(18): Show | a0001c0002t0002g0001a0001c0002t0002g0052a0001c0003t0002g0051others(19): Show | 23 | 308 | 0.0747 | -3 | c.487 others(20): Show |
COL27A1 | ENSG00000196739.15 | transcript | ENST00000356083.8 | protein_coding | 56/60 | INFO_REALIGN_3_PRIME | chr9 | TogoVar | |||||
COL28A1_chr7_7352875_7540873 | 7353488 | CCTT | C | downstream_gene_variant | MODIFIER | HG01081.hp1 HG02145.hp2 HG02615.hp1 others(4): Show |
a0001a0002a0007others(1): Show | a0001c0001a0002c0002a0002c0004others(2): Show | a0001c0001t0003a0002c0002t0006a0002c0004t0003others(2): Show | a0001c0001t0003g0173a0002c0002t0006g0002a0002c0004t0003g0032others(4): Show | 7 | 196 | 0.0357 | -3 | c.*51 others(14): Show |
COL28A1 | ENSG00000215018.10 | transcript | ENST00000399429.8 | protein_coding | 4386 | chr7 | TogoVar |