view | regionname | pos | ref | alt | annotation | impact | samples | ahapids | chapids | thapids | thapids | ac | an | af | len | hgvs_c | hgvs_p | genename | geneid | featuretype | featureid | transcript_biotype | rank | cdna cdna pos length
|
cds cds pos length
|
aa aa pos length
|
distance | status | chr | external |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
SELENOI_chr2_26341143_26400885 | 26348996 | CTTTTT | C | intron_variant | MODIFIER | HG00408.hp2 HG00438.hp2 HG00544.hp1 others(74): Show |
a0001 | a0001c0001a0001c0002a0001c0003others(2): Show | a0001c0001t0002a0001c0001t0007a0001c0001t0008others(8): Show | a0001c0001t0002g0022 a0001c0001t0002g0213 a0001c0001t0002g0216 others(62): Show |
77 | 334 | 0.2305 | -5 | c.57+ others(20): Show |
SELENOI | ENSG00000138018.19 | transcript | ENST00000260585.12 | protein_coding | 1/9 | INFO_REALIGN_3_PRIME | chr2 | TogoVar | ||||||
SELENOI_chr2_26341143_26400885 | 26381198 | CTTTTT | C | intron_variant | MODIFIER | HG00408.hp1 HG00609.hp1 HG00642.hp1 others(27): Show |
a0001 | a0001c0001a0001c0002 | a0001c0001t0007a0001c0001t0029a0001c0001t0030others(3): Show | a0001c0001t0007g0003 a0001c0001t0007g0041 a0001c0001t0007g0042 others(24): Show |
30 | 334 | 0.0898 | -5 | c.683 others(22): Show |
SELENOI | ENSG00000138018.19 | transcript | ENST00000260585.12 | protein_coding | 6/9 | INFO_REALIGN_3_PRIME | chr2 | TogoVar | ||||||
SELENOI_chr2_26341143_26400885 | 26398037 | CTTTTT | C | downstream_gene_variant | MODIFIER | HG00099.hp1 HG00280.hp2 HG00408.hp1 others(42): Show |
a0001 | a0001c0001a0001c0002a0001c0005 | a0001c0001t0003a0001c0001t0005a0001c0001t0006others(6): Show | a0001c0001t0003g0004 a0001c0001t0003g0009 a0001c0001t0003g0052 others(38): Show |
45 | 334 | 0.1347 | -5 | c.*89 others(16): Show |
SELENOI | ENSG00000138018.19 | transcript | ENST00000260585.12 | protein_coding | 2153 | chr2 | TogoVar | |||||||
SELENON_chr1_25795193_25823221 | 25822522 | CTTTTT | C | downstream_gene_variant | MODIFIER | HG00140.hp1 HG00140.hp2 HG00280.hp1 others(303): Show |
a0001a0002a0003others(2): Show | a0001c0001a0001c0004a0001c0005others(22): Show | a0001c0001t0001a0001c0001t0002a0001c0001t0004others(45): Show | a0001c0001t0001g0001 a0001c0001t0001g0002 a0001c0001t0001g0003 others(197): Show |
306 | 392 | 0.7806 | -5 | c.*68 others(16): Show |
SELENON | ENSG00000162430.18 | transcript | ENST00000361547.7 | protein_coding | 4302 | WARNING_TRANSCRIPT_MULTIPLE_STOP_CODONS | chr1 | TogoVar | ||||||
SELENOT_chr3_150598321_150635436 | 150611325 | ATATGT | A | intron_variant | MODIFIER | HG00280.hp2 HG00323.hp2 HG00408.hp1 others(144): Show |
a0001 | a0001c0001 | a0001c0001t0001a0001c0001t0010a0001c0001t0013others(6): Show | a0001c0001t0001g0001 a0001c0001t0001g0004 a0001c0001t0001g0006 others(83): Show |
147 | 380 | 0.3868 | -5 | c.137 others(22): Show |
SELENOT | ENSG00000198843.14 | transcript | ENST00000471696.6 | protein_coding | 1/5 | INFO_REALIGN_3_PRIME | chr3 | TogoVar | ||||||
SELENOT_chr3_150598321_150635436 | 150631202 | CAAAAA | C | downstream_gene_variant | MODIFIER | HG01106.hp1 HG01361.hp2 HG01516.hp2 others(3): Show |
a0001 | a0001c0001 | a0001c0001t0002 | a0001c0001t0002g0005 a0001c0001t0002g0042 a0001c0001t0002g0181 others(2): Show |
6 | 380 | 0.0158 | -5 | c.*35 others(16): Show |
SELENOT | ENSG00000198843.14 | transcript | ENST00000471696.6 | protein_coding | 767 | chr3 | TogoVar | |||||||
SELE_chr1_169717640_169739079 | 169721090 | ATTTTT | A | downstream_gene_variant | MODIFIER | HG00408.hp2 HG00597.hp2 HG00609.hp1 others(61): Show |
a0001a0002a0006others(1): Show | a0001c0001a0002c0002a0002c0011others(2): Show | a0001c0001t0005a0002c0002t0003a0002c0011t0006others(2): Show | a0001c0001t0005g0025 a0002c0002t0003g0004 a0002c0002t0003g0011 others(6): Show |
64 | 438 | 0.1461 | -5 | c.*34 others(16): Show |
SELE | ENSG00000007908.16 | transcript | ENST00000333360.12 | protein_coding | 1549 | chr1 | TogoVar | |||||||
SELL_chr1_169685667_169716620 | 169697442 | ATAACT | A | intron_variant | MODIFIER | HG01884.hp1 HG02559.hp2 HG02647.hp1 others(5): Show |
a0004a0005a0008 | a0004c0005a0005c0007a0008c0012 | a0004c0005t0002a0005c0007t0002a0008c0012t0002 | a0004c0005t0002g0047 a0004c0005t0002g0097 a0004c0005t0002g0159 others(4): Show |
8 | 432 | 0.0185 | -5 | c.108 others(22): Show |
SELL | ENSG00000188404.10 | transcript | ENST00000236147.6 | protein_coding | 7/8 | chr1 | TogoVar | |||||||
SEMA3A_chr7_83950777_84199789 | 83998635 | TTACAA | T | intron_variant | MODIFIER | HG00735.hp1 HG00738.hp1 HG01069.hp2 others(19): Show |
a0001 | a0001c0001a0001c0005 | a0001c0001t0007a0001c0001t0009a0001c0005t0009 | a0001c0001t0007g0092 a0001c0001t0007g0111 a0001c0001t0007g0134 others(19): Show |
22 | 276 | 0.0797 | -5 | c.145 others(24): Show |
SEMA3A | ENSG00000075213.11 | transcript | ENST00000265362.9 | protein_coding | 12/16 | chr7 | TogoVar | |||||||
SEMA3A_chr7_83950777_84199789 | 83999385 | CAATAT | C | intron_variant | MODIFIER | HG00639.hp2 HG02897.hp1 HG03579.hp1 others(1): Show |
a0001 | a0001c0007a0001c0012 | a0001c0007t0001a0001c0012t0016 | a0001c0007t0001g0010 a0001c0007t0001g0078 a0001c0007t0001g0081 others(1): Show |
4 | 276 | 0.0145 | -5 | c.145 others(24): Show |
SEMA3A | ENSG00000075213.11 | transcript | ENST00000265362.9 | protein_coding | 12/16 | chr7 | TogoVar | |||||||
SEMA3A_chr7_83950777_84199789 | 83999430 | TAATTA | T | intron_variant | MODIFIER | HG00544.hp1 HG00639.hp1 HG01106.hp2 others(43): Show |
a0001 | a0001c0001a0001c0003a0001c0004others(1): Show | a0001c0001t0017a0001c0003t0005a0001c0003t0006others(11): Show | a0001c0001t0017g0007 a0001c0001t0017g0263 a0001c0003t0005g0252 others(43): Show |
46 | 276 | 0.1667 | -5 | c.145 others(24): Show |
SEMA3A | ENSG00000075213.11 | transcript | ENST00000265362.9 | protein_coding | 12/16 | chr7 | TogoVar | |||||||
SEMA3A_chr7_83950777_84199789 | 84086553 | ATATAT | A | intron_variant | MODIFIER | HG00639.hp2 HG02145.hp2 HG02717.hp2 others(2): Show |
a0001 | a0001c0001a0001c0004a0001c0007 | a0001c0001t0001a0001c0001t0024a0001c0004t0006others(1): Show | a0001c0001t0001g0239 a0001c0001t0024g0212 a0001c0004t0006g0080 others(2): Show |
5 | 276 | 0.0181 | -5 | c.453 others(24): Show |
SEMA3A | ENSG00000075213.11 | transcript | ENST00000265362.9 | protein_coding | 4/16 | chr7 | TogoVar | |||||||
SEMA3A_chr7_83950777_84199789 | 84104534 | ATTCAG | A | intron_variant | MODIFIER | HG02258.hp2 HG03209.hp2 NA20129.hp2 |
a0001 | a0001c0003 | a0001c0003t0006a0001c0003t0014 | a0001c0003t0006g0151 a0001c0003t0014g0088 a0001c0003t0014g0089 |
3 | 276 | 0.0109 | -5 | c.453 others(22): Show |
SEMA3A | ENSG00000075213.11 | transcript | ENST00000265362.9 | protein_coding | 4/16 | chr7 | TogoVar | |||||||
SEMA3A_chr7_83950777_84199789 | 84132662 | GTTTTT | G | intron_variant | MODIFIER | HG00099.hp2 HG00544.hp1 HG00544.hp2 others(132): Show |
a0001a0004a0005 | a0001c0001a0001c0002a0001c0003others(6): Show | a0001c0001t0001a0001c0001t0003a0001c0001t0004others(31): Show | a0001c0001t0001g0024 a0001c0001t0001g0044 a0001c0001t0001g0064 others(132): Show |
135 | 276 | 0.4891 | -5 | c.270 others(22): Show |
SEMA3A | ENSG00000075213.11 | transcript | ENST00000265362.9 | protein_coding | 2/16 | chr7 | TogoVar | |||||||
SEMA3A_chr7_83950777_84199789 | 84148219 | TTTTTC | T | intron_variant | MODIFIER | HG00673.hp2 HG00735.hp2 HG01069.hp1 others(12): Show |
a0001 | a0001c0001a0001c0002a0001c0003others(1): Show | a0001c0001t0001a0001c0001t0004a0001c0001t0027others(4): Show | a0001c0001t0001g0024 a0001c0001t0001g0026 a0001c0001t0001g0035 others(12): Show |
15 | 276 | 0.0544 | -5 | c.113 others(24): Show |
SEMA3A | ENSG00000075213.11 | transcript | ENST00000265362.9 | protein_coding | 1/16 | chr7 | TogoVar | |||||||
SEMA3A_chr7_83950777_84199789 | 84158148 | CTTTTT | C | intron_variant | MODIFIER | HG01943.hp2 HG01978.hp1 HG02055.hp1 others(7): Show |
a0001a0002a0003 | a0001c0001a0002c0006a0002c0009others(1): Show | a0001c0001t0004a0002c0006t0010a0002c0009t0021others(1): Show | a0001c0001t0004g0214 a0001c0001t0004g0215 a0001c0001t0004g0216 others(7): Show |
10 | 276 | 0.0362 | -5 | c.113 others(24): Show |
SEMA3A | ENSG00000075213.11 | transcript | ENST00000265362.9 | protein_coding | 1/16 | chr7 | TogoVar | |||||||
SEMA3C_chr7_80737538_80924051 | 80790407 | GTTAAA | G | intron_variant | MODIFIER | HG00438.hp1 HG01258.hp2 HG01358.hp1 others(15): Show |
a0001a0002 | a0001c0002a0001c0017a0002c0005others(3): Show | a0001c0002t0001a0001c0017t0003a0002c0005t0001others(4): Show | a0001c0002t0001g0149 a0001c0017t0003g0232 a0002c0005t0001g0071 others(15): Show |
18 | 244 | 0.0738 | -5 | c.113 others(22): Show |
SEMA3C | ENSG00000075223.14 | transcript | ENST00000265361.8 | protein_coding | 11/17 | chr7 | TogoVar | |||||||
SEMA3C_chr7_80737538_80924051 | 80872797 | CAAAAA | C | intron_variant | MODIFIER | HG00423.hp2 HG00438.hp2 HG00558.hp1 others(22): Show |
a0001a0002 | a0001c0001a0001c0002a0001c0003others(3): Show | a0001c0001t0001a0001c0002t0001a0001c0003t0002others(3): Show | a0001c0001t0001g0003 a0001c0001t0001g0008 a0001c0001t0001g0060 others(22): Show |
25 | 244 | 0.1025 | -5 | c.103 others(24): Show |
SEMA3C | ENSG00000075223.14 | transcript | ENST00000265361.8 | protein_coding | 2/17 | chr7 | TogoVar | |||||||
SEMA3C_chr7_80737538_80924051 | 80915147 | CTCTTT | C | intron_variant | MODIFIER | HG00423.hp2 NA18950.hp2 NA18962.hp2 others(3): Show |
a0001 | a0001c0001a0001c0002a0001c0003others(1): Show | a0001c0001t0001a0001c0002t0001a0001c0003t0002others(1): Show | a0001c0001t0001g0003 a0001c0001t0001g0082 a0001c0002t0001g0081 others(3): Show |
6 | 244 | 0.0246 | -5 | c.103 others(22): Show |
SEMA3C | ENSG00000075223.14 | transcript | ENST00000265361.8 | protein_coding | 2/17 | chr7 | TogoVar | |||||||
SEMA3D_chr7_84990553_85192056 | 85003219 | TACATG | T | intron_variant | MODIFIER | HG01891.hp1 HG02109.hp2 HG02896.hp2 others(1): Show |
a0002 | a0002c0005 | a0002c0005t0016a0002c0005t0036 | a0002c0005t0016g0158 a0002c0005t0016g0159 a0002c0005t0016g0160 others(1): Show |
4 | 266 | 0.0150 | -5 | c.190 others(24): Show |
SEMA3D | ENSG00000153993.14 | transcript | ENST00000284136.11 | protein_coding | 18/18 | chr7 | TogoVar | |||||||
SEMA3D_chr7_84990553_85192056 | 85050071 | AAACAC | A | intron_variant | MODIFIER | HG01106.hp1 HG01934.hp1 HG01934.hp2 others(1): Show |
a0001a0002 | a0001c0001a0001c0012a0002c0002 | a0001c0001t0001a0001c0001t0008a0001c0012t0045others(1): Show | a0001c0001t0001g0064 a0001c0001t0008g0260 a0001c0012t0045g0247 others(1): Show |
4 | 266 | 0.0150 | -5 | c.861 others(22): Show |
SEMA3D | ENSG00000153993.14 | transcript | ENST00000284136.11 | protein_coding | 9/18 | chr7 | TogoVar | |||||||
SEMA3D_chr7_84990553_85192056 | 85168848 | AGAAAG | A | intron_variant | MODIFIER | HG01261.hp2 HG02040.hp2 HG02559.hp2 others(4): Show |
a0001a0002 | a0001c0001a0002c0002 | a0001c0001t0011a0001c0001t0032a0002c0002t0010 | a0001c0001t0011g0106 a0001c0001t0011g0115 a0001c0001t0011g0116 others(4): Show |
7 | 266 | 0.0263 | -5 | c.-17 others(26): Show |
SEMA3D | ENSG00000153993.14 | transcript | ENST00000284136.11 | protein_coding | 1/18 | chr7 | TogoVar | |||||||
SEMA3E_chr7_83358238_83654139 | 83368290 | CATTTT | C | intron_variant | MODIFIER | HG00639.hp1 HG01884.hp2 HG01891.hp2 others(22): Show |
a0001 | a0001c0005a0001c0008 | a0001c0005t0006a0001c0005t0013a0001c0005t0015others(9): Show | a0001c0005t0006g0042 a0001c0005t0006g0043 a0001c0005t0006g0044 others(22): Show |
25 | 226 | 0.1106 | -5 | c.187 others(22): Show |
SEMA3E | ENSG00000170381.15 | transcript | ENST00000643230.2 | protein_coding | 16/16 | chr7 | TogoVar | |||||||
SEMA3E_chr7_83358238_83654139 | 83388357 | TATAAC | T | intron_variant | MODIFIER | HG00438.hp1 HG00735.hp2 HG01081.hp2 others(38): Show |
a0001a0002a0005 | a0001c0001a0001c0010a0002c0004others(2): Show | a0001c0001t0029a0001c0001t0051a0001c0001t0052others(22): Show | a0001c0001t0029g0113 a0001c0001t0029g0172 a0001c0001t0051g0046 others(38): Show |
41 | 226 | 0.1814 | -5 | c.166 others(24): Show |
SEMA3E | ENSG00000170381.15 | transcript | ENST00000643230.2 | protein_coding | 14/16 | chr7 | TogoVar | |||||||
SEMA3E_chr7_83358238_83654139 | 83389835 | TATTAC | T | intron_variant | MODIFIER | HG01978.hp1 HG02698.hp2 HG03491.hp1 others(1): Show |
a0001 | a0001c0001a0001c0003 | a0001c0001t0009a0001c0001t0100a0001c0003t0048 | a0001c0001t0009g0092 a0001c0001t0009g0131 a0001c0001t0100g0209 others(1): Show |
4 | 226 | 0.0177 | -5 | c.166 others(24): Show |
SEMA3E | ENSG00000170381.15 | transcript | ENST00000643230.2 | protein_coding | 14/16 | chr7 | TogoVar | |||||||
SEMA3E_chr7_83358238_83654139 | 83389864 | TATTAC | T | intron_variant | MODIFIER | HG03195.hp2 HG03225.hp2 HG03486.hp2 others(2): Show |
a0001 | a0001c0001 | a0001c0001t0023a0001c0001t0076a0001c0001t0077others(1): Show | a0001c0001t0023g0187 a0001c0001t0023g0191 a0001c0001t0076g0158 others(2): Show |
5 | 226 | 0.0221 | -5 | c.166 others(24): Show |
SEMA3E | ENSG00000170381.15 | transcript | ENST00000643230.2 | protein_coding | 14/16 | chr7 | TogoVar | |||||||
SEMA3E_chr7_83358238_83654139 | 83389922 | TATTAC | T | intron_variant | MODIFIER | HG03195.hp2 HG03225.hp2 HG03486.hp2 others(3): Show |
a0001 | a0001c0001 | a0001c0001t0009a0001c0001t0023a0001c0001t0076others(2): Show | a0001c0001t0009g0126 a0001c0001t0023g0187 a0001c0001t0023g0191 others(3): Show |
6 | 226 | 0.0266 | -5 | c.166 others(24): Show |
SEMA3E | ENSG00000170381.15 | transcript | ENST00000643230.2 | protein_coding | 14/16 | chr7 | TogoVar | |||||||
SEMA3E_chr7_83358238_83654139 | 83413303 | TTCTTA | T | intron_variant | MODIFIER | HG03041.hp2 HG06807.hp2 NA18522.hp1 |
a0002 | a0002c0004 | a0002c0004t0018 | a0002c0004t0018g0168 a0002c0004t0018g0169 a0002c0004t0018g0171 |
3 | 226 | 0.0133 | -5 | c.551 others(22): Show |
SEMA3E | ENSG00000170381.15 | transcript | ENST00000643230.2 | protein_coding | 5/16 | chr7 | TogoVar | |||||||
SEMA3E_chr7_83358238_83654139 | 83431089 | AAAAAG | A | intron_variant | MODIFIER | HG00738.hp1 HG01070.hp1 HG01071.hp1 others(21): Show |
a0001a0003 | a0001c0001a0003c0007a0003c0009 | a0001c0001t0001a0001c0001t0002a0001c0001t0003others(15): Show | a0001c0001t0001g0088 a0001c0001t0001g0135 a0001c0001t0001g0138 others(21): Show |
24 | 226 | 0.1062 | -5 | c.457 others(24): Show |
SEMA3E | ENSG00000170381.15 | transcript | ENST00000643230.2 | protein_coding | 4/16 | chr7 | TogoVar | |||||||
SEMA3E_chr7_83358238_83654139 | 83454271 | AAATAT | A | intron_variant | MODIFIER | HG01515.hp1 HG01884.hp2 HG01891.hp2 others(6): Show |
a0001 | a0001c0001a0001c0005 | a0001c0001t0001a0001c0001t0002a0001c0001t0008others(5): Show | a0001c0001t0001g0135 a0001c0001t0002g0147 a0001c0001t0008g0142 others(6): Show |
9 | 226 | 0.0398 | -5 | c.456 others(24): Show |
SEMA3E | ENSG00000170381.15 | transcript | ENST00000643230.2 | protein_coding | 4/16 | chr7 | TogoVar | |||||||
SEMA3E_chr7_83358238_83654139 | 83454273 | ATATAT | A | intron_variant | MODIFIER | HG00738.hp1 HG01167.hp1 HG01261.hp1 others(10): Show |
a0001a0002a0003 | a0001c0001a0001c0006a0002c0004others(1): Show | a0001c0001t0001a0001c0001t0003a0001c0001t0005others(8): Show | a0001c0001t0001g0138 a0001c0001t0001g0139 a0001c0001t0003g0130 others(10): Show |
13 | 226 | 0.0575 | -5 | c.456 others(24): Show |
SEMA3E | ENSG00000170381.15 | transcript | ENST00000643230.2 | protein_coding | 4/16 | chr7 | TogoVar | |||||||
SEMA3E_chr7_83358238_83654139 | 83498077 | TTTCTC | T | intron_variant | MODIFIER | HG00408.hp2 HG00438.hp1 HG00597.hp1 others(35): Show |
a0001a0002 | a0001c0002a0001c0003a0002c0004 | a0001c0002t0001a0001c0002t0002a0001c0002t0008others(21): Show | a0001c0002t0001g0097 a0001c0002t0001g0104 a0001c0002t0001g0109 others(35): Show |
38 | 226 | 0.1681 | -5 | c.116 others(22): Show |
SEMA3E | ENSG00000170381.15 | transcript | ENST00000643230.2 | protein_coding | 1/16 | chr7 | TogoVar | |||||||
SEMA3E_chr7_83358238_83654139 | 83533554 | GATAAA | G | intron_variant | MODIFIER | HG02723.hp2 HG03491.hp2 HG03492.hp1 others(1): Show |
a0001a0002 | a0001c0001a0002c0004a0002c0012 | a0001c0001t0024a0002c0004t0031a0002c0004t0089others(1): Show | a0001c0001t0024g0004 a0002c0004t0031g0178 a0002c0004t0089g0179 others(1): Show |
4 | 226 | 0.0177 | -5 | c.116 others(24): Show |
SEMA3E | ENSG00000170381.15 | transcript | ENST00000643230.2 | protein_coding | 1/16 | chr7 | TogoVar | |||||||
SEMA3E_chr7_83358238_83654139 | 83545897 | AATATT | A | intron_variant | MODIFIER | HG00408.hp1 HG00597.hp2 HG00609.hp1 others(93): Show |
a0001a0002a0003 | a0001c0001a0001c0002a0001c0003others(8): Show | a0001c0001t0019a0001c0001t0022a0001c0001t0023others(59): Show | a0001c0001t0019g0163 a0001c0001t0019g0165 a0001c0001t0019g0166 others(93): Show |
96 | 226 | 0.4248 | -5 | c.116 others(24): Show |
SEMA3E | ENSG00000170381.15 | transcript | ENST00000643230.2 | protein_coding | 1/16 | chr7 | TogoVar | |||||||
SEMA3E_chr7_83358238_83654139 | 83569301 | TAGACA | T | intron_variant | MODIFIER | HG00408.hp1 HG00597.hp2 HG00609.hp1 others(142): Show |
a0001a0002a0003 | a0001c0001a0001c0002a0001c0003others(10): Show | a0001c0001t0001a0001c0001t0002a0001c0001t0003others(86): Show | a0001c0001t0001g0135 a0001c0001t0001g0138 a0001c0001t0001g0139 others(142): Show |
145 | 226 | 0.6416 | -5 | c.116 others(24): Show |
SEMA3E | ENSG00000170381.15 | transcript | ENST00000643230.2 | protein_coding | 1/16 | chr7 | TogoVar | |||||||
SEMA3E_chr7_83358238_83654139 | 83574471 | AGAGAG | A | intron_variant | MODIFIER | HG00408.hp1 HG00597.hp2 HG00609.hp1 others(119): Show |
a0001a0002a0003 | a0001c0001a0001c0002a0001c0003others(9): Show | a0001c0001t0001a0001c0001t0002a0001c0001t0003others(72): Show | a0001c0001t0001g0135 a0001c0001t0001g0138 a0001c0001t0001g0139 others(119): Show |
122 | 226 | 0.5398 | -5 | c.115 others(24): Show |
SEMA3E | ENSG00000170381.15 | transcript | ENST00000643230.2 | protein_coding | 1/16 | chr7 | TogoVar | |||||||
SEMA3E_chr7_83358238_83654139 | 83649269 | TGGGGA | T | upstream_gene_variant | MODIFIER | HG00438.hp2 HG00597.hp2 HG00733.hp1 others(36): Show |
a0001a0002 | a0001c0001a0001c0002a0001c0003others(4): Show | a0001c0001t0001a0001c0001t0009a0001c0001t0019others(20): Show | a0001c0001t0001g0088 a0001c0001t0009g0092 a0001c0001t0019g0163 others(36): Show |
39 | 226 | 0.1726 | -5 | c.-73 others(14): Show |
SEMA3E | ENSG00000170381.15 | transcript | ENST00000643230.2 | protein_coding | 131 | chr7 | TogoVar | |||||||
SEMA4A_chr1_156148585_156182744 | 156155184 | TGGCTG | T | intron_variant | MODIFIER | HG02257.hp2 HG02559.hp2 HG02965.hp1 |
a0001 | a0001c0001 | a0001c0001t0001 | a0001c0001t0001g0278 a0001c0001t0001g0279 a0001c0001t0001g0280 |
3 | 374 | 0.0080 | -5 | c.139 others(20): Show |
SEMA4A | ENSG00000196189.14 | transcript | ENST00000368285.8 | protein_coding | 2/14 | INFO_REALIGN_3_PRIME | chr1 | TogoVar | ||||||
SEMA4B_chr15_90196330_90234660 | 90197902 | ATTTAT | A | upstream_gene_variant | MODIFIER | HG02109.hp1 HG02572.hp1 HG02630.hp1 others(5): Show |
a0001a0003 | a0001c0007a0003c0001 | a0001c0007t0009a0001c0007t0012a0003c0001t0015 | a0001c0007t0009g0046 a0001c0007t0009g0219 a0001c0007t0009g0220 others(4): Show |
8 | 420 | 0.0191 | -5 | c.-36 others(16): Show |
SEMA4B | ENSG00000185033.15 | transcript | ENST00000411539.7 | protein_coding | 3427 | chr15 | TogoVar | |||||||
SEMA4B_chr15_90196330_90234660 | 90229915 | CAAGGG | C | downstream_gene_variant | MODIFIER | HG00099.hp1 HG00099.hp2 HG00323.hp1 others(272): Show |
a0001a0002a0006others(7): Show | a0001c0002a0001c0005a0001c0007others(26): Show | a0001c0002t0001a0001c0005t0003a0001c0005t0011others(38): Show | a0001c0002t0001g0002 a0001c0002t0001g0004 a0001c0002t0001g0014 others(185): Show |
275 | 420 | 0.6548 | -5 | c.*12 others(16): Show |
SEMA4B | ENSG00000185033.15 | transcript | ENST00000411539.7 | protein_coding | 256 | chr15 | TogoVar | |||||||
SEMA4C_chr2_96854718_96875080 | 96872354 | ACAAAC | A | upstream_gene_variant | MODIFIER | HG00408.hp1 HG00408.hp2 HG00423.hp1 others(165): Show |
a0001a0003a0005others(3): Show | a0001c0001a0001c0010a0003c0003others(4): Show | a0001c0001t0001a0001c0001t0002a0001c0001t0003others(11): Show | a0001c0001t0001g0001 a0001c0001t0001g0005 a0001c0001t0001g0006 others(42): Show |
168 | 350 | 0.4800 | -5 | c.-25 others(16): Show |
SEMA4C | ENSG00000168758.11 | transcript | ENST00000305476.10 | protein_coding | 2275 | chr2 | TogoVar | |||||||
SEMA4D_chr9_89372235_89503113 | 89400006 | CAAAAA | C | intron_variant | MODIFIER | HG00408.hp1 HG00438.hp1 HG00438.hp2 others(42): Show |
a0001a0002a0007others(2): Show | a0001c0001a0001c0003a0001c0007others(4): Show | a0001c0001t0001a0001c0001t0002a0001c0001t0003others(15): Show | a0001c0001t0001g0048 a0001c0001t0001g0064 a0001c0001t0001g0203 others(42): Show |
45 | 370 | 0.1216 | -5 | c.253 others(20): Show |
SEMA4D | ENSG00000187764.12 | transcript | ENST00000422704.7 | protein_coding | 4/15 | chr9 | TogoVar | |||||||
SEMA4D_chr9_89372235_89503113 | 89400785 | TTTTTC | T | intron_variant | MODIFIER | HG00642.hp1 HG01106.hp1 HG01261.hp2 others(4): Show |
a0001 | a0001c0001 | a0001c0001t0003 | a0001c0001t0003g0013 a0001c0001t0003g0093 a0001c0001t0003g0098 others(4): Show |
7 | 370 | 0.0189 | -5 | c.253 others(22): Show |
SEMA4D | ENSG00000187764.12 | transcript | ENST00000422704.7 | protein_coding | 4/15 | chr9 | TogoVar | |||||||
SEMA4D_chr9_89372235_89503113 | 89438964 | CTTTTT | C | intron_variant | MODIFIER | HG00099.hp1 HG00323.hp1 HG00738.hp2 others(28): Show |
a0001a0002a0003others(3): Show | a0001c0001a0001c0003a0001c0004others(5): Show | a0001c0001t0001a0001c0001t0002a0001c0001t0003others(11): Show | a0001c0001t0001g0077 a0001c0001t0001g0159 a0001c0001t0001g0209 others(28): Show |
31 | 370 | 0.0838 | -5 | c.-24 others(26): Show |
SEMA4D | ENSG00000187764.12 | transcript | ENST00000422704.7 | protein_coding | 2/15 | chr9 | TogoVar | |||||||
SEMA4D_chr9_89372235_89503113 | 89469338 | CATGTT | C | intron_variant | MODIFIER | HG00140.hp2 HG00280.hp1 HG00323.hp1 others(86): Show |
a0001a0002a0003others(1): Show | a0001c0001a0001c0003a0001c0004others(4): Show | a0001c0001t0002a0001c0001t0011a0001c0001t0012others(19): Show | a0001c0001t0002g0291 a0001c0001t0002g0297 a0001c0001t0002g0325 others(86): Show |
89 | 370 | 0.2405 | -5 | c.-30 others(26): Show |
SEMA4D | ENSG00000187764.12 | transcript | ENST00000422704.7 | protein_coding | 1/15 | chr9 | TogoVar | |||||||
SEMA5A_chr5_9030033_9551075 | 9067580 | CATAAA | C | intron_variant | MODIFIER | HG00140.hp1 HG00140.hp2 HG00639.hp1 others(101): Show |
a0001a0002a0003others(2): Show | a0001c0001a0001c0002a0001c0003others(13): Show | a0001c0001t0001a0001c0001t0002a0001c0001t0003others(80): Show | a0001c0001t0001g0010 a0001c0001t0001g0014 a0001c0001t0001g0018 others(101): Show |
104 | 134 | 0.7761 | -5 | c.207 others(22): Show |
SEMA5A | ENSG00000112902.12 | transcript | ENST00000382496.10 | protein_coding | 16/22 | chr5 | TogoVar | |||||||
SEMA5A_chr5_9030033_9551075 | 9119918 | TAAAAA | T | intron_variant | MODIFIER | HG02258.hp1 HG03195.hp1 HG03209.hp1 others(6): Show |
a0001 | a0001c0001a0001c0003a0001c0010 | a0001c0001t0001a0001c0001t0013a0001c0001t0054others(4): Show | a0001c0001t0001g0042 a0001c0001t0001g0043 a0001c0001t0013g0036 others(6): Show |
9 | 134 | 0.0672 | -5 | c.178 others(22): Show |
SEMA5A | ENSG00000112902.12 | transcript | ENST00000382496.10 | protein_coding | 14/22 | chr5 | TogoVar | |||||||
SEMA5A_chr5_9030033_9551075 | 9119952 | TAATTC | T | intron_variant | MODIFIER | NA18961.hp1 NA18966.hp2 |
a0001 | a0001c0005a0001c0009 | a0001c0005t0002a0001c0009t0001 | a0001c0005t0002g0115 a0001c0009t0001g0045 |
2 | 134 | 0.0149 | -5 | c.178 others(22): Show |
SEMA5A | ENSG00000112902.12 | transcript | ENST00000382496.10 | protein_coding | 14/22 | chr5 | TogoVar | |||||||
SEMA5A_chr5_9030033_9551075 | 9145853 | CAGACT | C | intron_variant | MODIFIER | HG03225.hp2 HG03453.hp2 |
a0001 | a0001c0005a0001c0009 | a0001c0005t0007a0001c0009t0002 | a0001c0005t0007g0086 a0001c0009t0002g0113 |
2 | 134 | 0.0149 | -5 | c.148 others(24): Show |
SEMA5A | ENSG00000112902.12 | transcript | ENST00000382496.10 | protein_coding | 12/22 | chr5 | TogoVar | |||||||
SEMA5A_chr5_9030033_9551075 | 9150616 | CGTGTG | C | intron_variant | MODIFIER | HG01123.hp1 HG02486.hp2 HG02976.hp1 others(1): Show |
a0001 | a0001c0007a0001c0022 | a0001c0007t0012a0001c0007t0017a0001c0007t0031others(1): Show | a0001c0007t0012g0064 a0001c0007t0017g0084 a0001c0007t0031g0012 others(1): Show |
4 | 134 | 0.0299 | -5 | c.148 others(24): Show |
SEMA5A | ENSG00000112902.12 | transcript | ENST00000382496.10 | protein_coding | 12/22 | chr5 | TogoVar |