view | regionname | pos | ref | alt | annotation | impact | samples | ahapids | chapids | thapids | thapids | ac | an | af | len | hgvs_c | hgvs_p | genename | geneid | featuretype | featureid | transcript_biotype | rank | cdna cdna pos length
|
cds cds pos length
|
aa aa pos length
|
distance | status | chr | external |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
TMPPE_chr3_33085422_33102146 | 33101881 | AAAAAC | A | upstream_gene_variant | MODIFIER | HG00423.hp1 NA18612.hp2 NA19068.hp2 |
a0001 | a0001c0001 | a0001c0001t0002 | a0001c0001t0002g0002 | 3 | 464 | 0.0065 | -5 | c.-52 others(16): Show |
TMPPE | ENSG00000188167.9 | transcript | ENST00000342462.5 | protein_coding | 4736 | chr3 | TogoVar | |||||||
TMPRSS11A_chr4_67904395_67968493 | 67905352 | TTAAGA | T | downstream_gene_variant | MODIFIER | HG01106.hp2 HG01109.hp1 HG01433.hp2 others(10): Show |
a0001a0003 | a0001c0003a0001c0004a0001c0006others(1): Show | a0001c0003t0012a0001c0003t0014a0001c0004t0012others(3): Show | a0001c0003t0012g0133 a0001c0003t0012g0134 a0001c0003t0014g0237 others(10): Show |
13 | 392 | 0.0332 | -5 | c.*59 others(16): Show |
TMPRSS11A | ENSG00000187054.16 | transcript | ENST00000508048.6 | protein_coding | 4042 | chr4 | TogoVar | |||||||
TMPRSS11A_chr4_67904395_67968493 | 67920545 | ATATAT | A | intron_variant | MODIFIER | HG01891.hp1 HG02055.hp1 HG02258.hp2 others(10): Show |
a0001a0003 | a0001c0003a0001c0004a0001c0006others(1): Show | a0001c0003t0018a0001c0004t0010a0001c0004t0015others(3): Show | a0001c0003t0018g0268 a0001c0004t0010g0012 a0001c0004t0010g0031 others(6): Show |
13 | 392 | 0.0332 | -5 | c.693 others(22): Show |
TMPRSS11A | ENSG00000187054.16 | transcript | ENST00000508048.6 | protein_coding | 7/9 | chr4 | TogoVar | |||||||
TMPRSS11B_chr4_68221653_68250694 | 68242216 | AATATT | A | intron_variant | MODIFIER | HG00099.hp1 HG00140.hp1 HG00140.hp2 others(290): Show |
a0001a0002a0003others(3): Show | a0001c0001a0001c0013a0002c0002others(6): Show | a0001c0001t0001a0001c0001t0003a0001c0001t0009others(14): Show | a0001c0001t0001g0001 a0001c0001t0001g0002 a0001c0001t0001g0003 others(107): Show |
293 | 378 | 0.7751 | -5 | c.9-4 others(16): Show |
TMPRSS11B | ENSG00000185873.8 | transcript | ENST00000332644.6 | protein_coding | 1/9 | chr4 | TogoVar | |||||||
TMPRSS11B_chr4_68221653_68250694 | 68242261 | TATATA | T | intron_variant | MODIFIER | HG02145.hp2 HG02258.hp1 HG02486.hp1 others(7): Show |
a0002 | a0002c0002 | a0002c0002t0002a0002c0002t0005 | a0002c0002t0002g0011 a0002c0002t0002g0017 a0002c0002t0002g0141 others(1): Show |
10 | 378 | 0.0265 | -5 | c.9-4 others(16): Show |
TMPRSS11B | ENSG00000185873.8 | transcript | ENST00000332644.6 | protein_coding | 1/9 | chr4 | TogoVar | |||||||
TMPRSS11B_chr4_68221653_68250694 | 68242271 | AATATT | A | intron_variant | MODIFIER | HG01891.hp1 HG02717.hp2 HG03486.hp1 others(1): Show |
a0002 | a0002c0005a0002c0009 | a0002c0005t0008a0002c0009t0014 | a0002c0005t0008g0024 a0002c0005t0008g0047 a0002c0009t0014g0049 |
4 | 366 | 0.0109 | -5 | c.9-4 others(16): Show |
TMPRSS11B | ENSG00000185873.8 | transcript | ENST00000332644.6 | protein_coding | 1/9 | chr4 | TogoVar | |||||||
TMPRSS11B_chr4_68221653_68250694 | 68242418 | CATAAT | C | intron_variant | MODIFIER | HG02630.hp2 HG02970.hp2 HG02976.hp2 others(1): Show |
a0002 | a0002c0002 | a0002c0002t0006 | a0002c0002t0006g0018 a0002c0002t0006g0050 |
4 | 378 | 0.0106 | -5 | c.9-6 others(16): Show |
TMPRSS11B | ENSG00000185873.8 | transcript | ENST00000332644.6 | protein_coding | 1/9 | chr4 | TogoVar | |||||||
TMPRSS11D_chr4_67815876_67889002 | 67855252 | CAAAAA | C | intron_variant | MODIFIER | HG00558.hp1 HG00597.hp2 HG00609.hp2 others(74): Show |
a0001 | a0001c0001 | a0001c0001t0001a0001c0001t0002a0001c0001t0003others(3): Show | a0001c0001t0001g0003 a0001c0001t0001g0010 a0001c0001t0001g0056 others(65): Show |
77 | 91 | 0.8462 | -5 | c.131 others(22): Show |
TMPRSS11D | ENSG00000153802.12 | transcript | ENST00000283916.11 | protein_coding | 2/9 | chr4 | TogoVar | |||||||
TMPRSS11E_chr4_68442463_68502604 | 68444062 | CTTGAT | C | upstream_gene_variant | MODIFIER | HG02280.hp1 HG02486.hp2 HG02615.hp2 others(11): Show |
a0001 | a0001c0001 | a0001c0001t0001a0001c0001t0003 | a0001c0001t0001g0079 a0001c0001t0001g0156 a0001c0001t0001g0177 others(11): Show |
14 | 318 | 0.0440 | -5 | c.-34 others(16): Show |
TMPRSS11E | ENSG00000087128.10 | transcript | ENST00000305363.9 | protein_coding | 3400 | chr4 | TogoVar | |||||||
TMPRSS11F_chr4_68048198_68134869 | 68101451 | TAAAAC | T | intron_variant | MODIFIER | HG00140.hp2 HG00423.hp2 HG00597.hp1 others(121): Show |
a0001a0002a0009 | a0001c0001a0002c0002a0009c0006 | a0001c0001t0001a0001c0001t0003a0002c0002t0001others(4): Show | a0001c0001t0001g0150 a0001c0001t0001g0156 a0001c0001t0001g0157 others(120): Show |
124 | 346 | 0.3584 | -5 | c.12- others(20): Show |
TMPRSS11F | ENSG00000198092.6 | transcript | ENST00000356291.3 | protein_coding | 1/9 | chr4 | TogoVar | |||||||
TMPRSS12_chr12_50837926_50892884 | 50850935 | TGCTGA | T | intron_variant | MODIFIER | HG01109.hp2 HG06807.hp2 NA20129.hp2 |
a0001a0002 | a0001c0001a0002c0002 | a0001c0001t0001a0002c0002t0001 | a0001c0001t0001g0038 a0001c0001t0001g0039 a0002c0002t0001g0061 |
3 | 388 | 0.0077 | -5 | c.383 others(22): Show |
TMPRSS12 | ENSG00000186452.11 | transcript | ENST00000398458.4 | protein_coding | 2/4 | INFO_REALIGN_3_PRIME | chr12 | TogoVar | ||||||
TMPRSS12_chr12_50837926_50892884 | 50882286 | TAAAAA | T | intron_variant | MODIFIER | HG01069.hp2 HG01071.hp1 HG01346.hp1 others(9): Show |
a0002 | a0002c0002 | a0002c0002t0003 | a0002c0002t0003g0136 a0002c0002t0003g0138 a0002c0002t0003g0139 others(9): Show |
12 | 120 | 0.1000 | -5 | c.653 others(22): Show |
TMPRSS12 | ENSG00000186452.11 | transcript | ENST00000398458.4 | protein_coding | 3/4 | INFO_REALIGN_3_PRIME | chr12 | TogoVar | ||||||
TMPRSS12_chr12_50837926_50892884 | 50887782 | ATATTT | A | 3_prime_UTR_variant | MODIFIER | HG00140.hp1 HG01167.hp1 HG01169.hp2 others(12): Show |
a0001a0002a0007 | a0001c0001a0001c0007a0002c0002others(1): Show | a0001c0001t0004a0001c0007t0004a0002c0002t0004others(1): Show | a0001c0001t0004g0031 a0001c0001t0004g0032 a0001c0001t0004g0033 others(12): Show |
15 | 388 | 0.0387 | -5 | c.*27 others(14): Show |
TMPRSS12 | ENSG00000186452.11 | transcript | ENST00000398458.4 | protein_coding | 5/5 | 273 | INFO_REALIGN_3_PRIME | chr12 | TogoVar | |||||
TMPRSS12_chr12_50837926_50892884 | 50892714 | CAAAAA | C | downstream_gene_variant | MODIFIER | HG02155.hp1 HG02451.hp2 HG02976.hp2 others(19): Show |
a0001a0002a0003others(1): Show | a0001c0001a0002c0002a0003c0003others(1): Show | a0001c0001t0001a0002c0002t0001a0003c0003t0001others(1): Show | a0001c0001t0001g0004 a0001c0001t0001g0010 a0001c0001t0001g0167 others(16): Show |
22 | 98 | 0.2245 | -5 | c.*52 others(16): Show |
TMPRSS12 | ENSG00000186452.11 | transcript | ENST00000398458.4 | protein_coding | 4831 | chr12 | TogoVar | |||||||
TMPRSS13_chr11_117895641_117934402 | 117924177 | CAAAGA | C | intron_variant | MODIFIER | HG00323.hp2 HG00408.hp1 HG00438.hp2 others(83): Show |
a0001a0002a0009others(1): Show | a0001c0001a0001c0004a0001c0007others(12): Show | a0001c0001t0001a0001c0001t0002a0001c0001t0005others(29): Show | a0001c0001t0001g0041 a0001c0001t0001g0205 a0001c0001t0001g0220 others(68): Show |
86 | 90 | 0.9556 | -5 | c.21+ others(20): Show |
TMPRSS13 | ENSG00000137747.16 | transcript | ENST00000524993.6 | protein_coding | 1/12 | chr11 | TogoVar | |||||||
TMPRSS15_chr21_18264116_18408785 | 18276755 | CTTTTT | C | intron_variant | MODIFIER | HG01243.hp1 HG01358.hp1 HG01891.hp2 others(33): Show |
a0001a0002a0003others(14): Show | a0001c0007a0001c0046a0001c0052others(21): Show | a0001c0007t0002a0001c0046t0002a0001c0052t0002others(21): Show | a0001c0007t0002g0023 a0001c0007t0002g0059 a0001c0007t0002g0095 others(33): Show |
36 | 248 | 0.1452 | -5 | c.276 others(24): Show |
TMPRSS15 | ENSG00000154646.9 | transcript | ENST00000284885.8 | protein_coding | 23/24 | chr21 | TogoVar | |||||||
TMPRSS15_chr21_18264116_18408785 | 18301156 | CATAAG | C | intron_variant | MODIFIER | HG02055.hp1 HG02280.hp1 HG02451.hp2 |
a0001a0012a0025 | a0001c0001a0012c0044a0025c0028 | a0001c0001t0001a0012c0044t0001a0025c0028t0001 | a0001c0001t0001g0049 a0012c0044t0001g0083 a0025c0028t0001g0111 |
3 | 312 | 0.0096 | -5 | c.216 others(24): Show |
TMPRSS15 | ENSG00000154646.9 | transcript | ENST00000284885.8 | protein_coding | 18/24 | chr21 | TogoVar | |||||||
TMPRSS15_chr21_18264116_18408785 | 18305183 | CTTTTT | C | intron_variant | MODIFIER | HG00639.hp2 HG01243.hp1 HG02258.hp2 others(12): Show |
a0002a0005a0006others(5): Show | a0002c0011a0002c0045a0005c0033others(7): Show | a0002c0011t0002a0002c0045t0002a0005c0033t0002others(7): Show | a0002c0011t0002g0061 a0002c0011t0002g0203 a0002c0011t0002g0204 others(12): Show |
15 | 79 | 0.1899 | -5 | c.216 others(24): Show |
TMPRSS15 | ENSG00000154646.9 | transcript | ENST00000284885.8 | protein_coding | 18/24 | chr21 | TogoVar | |||||||
TMPRSS15_chr21_18264116_18408785 | 18317755 | TTCCCA | T | intron_variant | MODIFIER | HG00140.hp1 HG00140.hp2 HG00280.hp1 others(187): Show |
a0001a0002a0003others(24): Show | a0001c0001a0001c0006a0001c0007others(45): Show | a0001c0001t0001a0001c0001t0003a0001c0001t0009others(61): Show | a0001c0001t0001g0010 a0001c0001t0001g0012 a0001c0001t0001g0019 others(187): Show |
190 | 305 | 0.6230 | -5 | c.192 others(24): Show |
TMPRSS15 | ENSG00000154646.9 | transcript | ENST00000284885.8 | protein_coding | 16/24 | chr21 | TogoVar | |||||||
TMPRSS15_chr21_18264116_18408785 | 18317837 | TCCATC | T | intron_variant | MODIFIER | HG00544.hp1 HG00544.hp2 HG00597.hp1 others(67): Show |
a0001a0002a0003others(9): Show | a0001c0001a0001c0006a0001c0007others(17): Show | a0001c0001t0001a0001c0001t0010a0001c0001t0017others(21): Show | a0001c0001t0001g0010 a0001c0001t0001g0012 a0001c0001t0001g0021 others(67): Show |
70 | 167 | 0.4192 | -5 | c.192 others(24): Show |
TMPRSS15 | ENSG00000154646.9 | transcript | ENST00000284885.8 | protein_coding | 16/24 | chr21 | TogoVar | |||||||
TMPRSS2_chr21_41459305_41513158 | 41491151 | ATTTTT | A | intron_variant | MODIFIER | HG00280.hp2 HG00323.hp1 HG00323.hp2 others(76): Show |
a0001a0002a0009others(1): Show | a0001c0001a0001c0002a0001c0004others(11): Show | a0001c0001t0001a0001c0001t0002a0001c0002t0001others(24): Show | a0001c0001t0001g0196 a0001c0001t0001g0244 a0001c0001t0002g0215 others(74): Show |
79 | 164 | 0.4817 | -5 | c.239 others(22): Show |
TMPRSS2 | ENSG00000184012.14 | transcript | ENST00000332149.10 | protein_coding | 3/13 | chr21 | TogoVar | |||||||
TMPRSS2_chr21_41459305_41513158 | 41496829 | CTTTTT | C | intron_variant | MODIFIER | HG00597.hp1 HG00639.hp2 HG01109.hp1 others(12): Show |
a0001a0002 | a0001c0001a0001c0004a0001c0010others(2): Show | a0001c0001t0001a0001c0001t0002a0001c0001t0003others(4): Show | a0001c0001t0001g0001 a0001c0001t0001g0093 a0001c0001t0001g0094 others(10): Show |
15 | 93 | 0.1613 | -5 | c.15+ others(20): Show |
TMPRSS2 | ENSG00000184012.14 | transcript | ENST00000332149.10 | protein_coding | 2/13 | chr21 | TogoVar | |||||||
TMPRSS3_chr21_42366890_42401052 | 42392281 | AAGAAG | A | intron_variant | MODIFIER | HG01081.hp1 HG01257.hp2 HG01258.hp2 others(17): Show |
a0001a0002a0006 | a0001c0002a0002c0007a0006c0010 | a0001c0002t0005a0001c0002t0012a0001c0002t0014others(3): Show | a0001c0002t0005g0013 a0001c0002t0005g0046 a0001c0002t0005g0378 others(14): Show |
20 | 470 | 0.0426 | -5 | c.95- others(20): Show |
TMPRSS3 | ENSG00000160183.17 | transcript | ENST00000644384.2 | protein_coding | 2/12 | chr21 | TogoVar | |||||||
TMPRSS3_chr21_42366890_42401052 | 42399354 | TAAAAA | T | upstream_gene_variant | MODIFIER | HG00323.hp1 HG02622.hp1 HG02922.hp2 others(4): Show |
a0001a0002 | a0001c0001a0001c0002a0002c0003others(1): Show | a0001c0001t0003a0001c0002t0001a0001c0002t0003others(3): Show | a0001c0001t0003g0119 a0001c0002t0001g0100 a0001c0002t0001g0106 others(4): Show |
7 | 31 | 0.2258 | -5 | c.-34 others(16): Show |
TMPRSS3 | ENSG00000160183.17 | transcript | ENST00000644384.2 | protein_coding | 3303 | chr21 | TogoVar | |||||||
TMPRSS4_chr11_118072078_118126890 | 118078044 | AGAAAG | A | intron_variant | MODIFIER | HG00099.hp1 HG00140.hp2 HG00280.hp2 others(145): Show |
a0001a0002a0003others(6): Show | a0001c0001a0001c0002a0001c0009others(10): Show | a0001c0001t0001a0001c0001t0002a0001c0001t0003others(34): Show | a0001c0001t0001g0001 a0001c0001t0001g0018 a0001c0001t0001g0234 others(131): Show |
148 | 399 | 0.3709 | -5 | c.3+7 others(16): Show |
TMPRSS4 | ENSG00000137648.19 | transcript | ENST00000437212.8 | protein_coding | 1/12 | chr11 | TogoVar | |||||||
TMPRSS4_chr11_118072078_118126890 | 118124388 | AAAAAC | A | downstream_gene_variant | MODIFIER | HG00280.hp2 HG00423.hp1 HG00609.hp1 others(33): Show |
a0002a0003a0005 | a0002c0003a0003c0007a0005c0006 | a0002c0003t0005a0002c0003t0023a0003c0007t0010others(2): Show | a0002c0003t0005g0007 a0002c0003t0005g0023 a0002c0003t0005g0042 others(31): Show |
36 | 404 | 0.0891 | -5 | c.*64 others(16): Show |
TMPRSS4 | ENSG00000137648.19 | transcript | ENST00000437212.8 | protein_coding | 2499 | chr11 | TogoVar | |||||||
TMPRSS5_chr11_113682550_113711308 | 113699265 | CTCTCT | C | intron_variant | MODIFIER | HG02602.hp1 NA18977.hp2 NA18984.hp1 others(1): Show |
a0001 | a0001c0004 | a0001c0004t0001 | a0001c0004t0001g0005 a0001c0004t0001g0064 a0001c0004t0001g0065 others(1): Show |
4 | 423 | 0.0095 | -5 | c.206 others(20): Show |
TMPRSS5 | ENSG00000166682.13 | transcript | ENST00000299882.11 | protein_coding | 3/12 | chr11 | TogoVar | |||||||
TMPRSS6_chr22_37060436_37114713 | 37069345 | CTGGGG | C | splice_acceptor_variant others(2): Show |
HIGH | HG00099.hp2 HG00140.hp2 HG00280.hp1 others(122): Show |
a0001a0002a0003others(2): Show | a0001c0005a0001c0006a0001c0009others(21): Show | a0001c0005t0001a0001c0005t0002a0001c0006t0001others(22): Show | a0001c0005t0001g0005 a0001c0005t0001g0088 a0001c0005t0001g0149 others(112): Show |
125 | 306 | 0.4085 | -5 | c.184 others(18): Show |
TMPRSS6 | ENSG00000187045.19 | transcript | ENST00000676104.1 | protein_coding | 15/17 | chr22 | TogoVar | |||||||
TMPRSS6_chr22_37060436_37114713 | 37078697 | GAGGAA | G | intron_variant | MODIFIER | HG00099.hp2 HG00140.hp2 HG00280.hp1 others(155): Show |
a0001a0002a0003others(5): Show | a0001c0004a0001c0005a0001c0006others(36): Show | a0001c0004t0002a0001c0005t0001a0001c0005t0002others(39): Show | a0001c0004t0002g0313 a0001c0005t0001g0250 a0001c0005t0002g0016 others(147): Show |
158 | 346 | 0.4566 | -5 | c.119 others(24): Show |
TMPRSS6 | ENSG00000187045.19 | transcript | ENST00000676104.1 | protein_coding | 10/17 | chr22 | TogoVar | |||||||
TMPRSS6_chr22_37060436_37114713 | 37078932 | AGAAGG | A | intron_variant | MODIFIER | HG01099.hp2 HG02818.hp1 HG02886.hp2 others(8): Show |
a0001a0003a0008others(1): Show | a0001c0004a0001c0005a0001c0007others(4): Show | a0001c0004t0006a0001c0004t0012a0001c0005t0001others(5): Show | a0001c0004t0006g0007 a0001c0004t0006g0138 a0001c0004t0012g0330 others(7): Show |
11 | 346 | 0.0318 | -5 | c.119 others(24): Show |
TMPRSS6 | ENSG00000187045.19 | transcript | ENST00000676104.1 | protein_coding | 10/17 | chr22 | TogoVar | |||||||
TMPRSS7_chr3_112029736_112086269 | 112054729 | CTTTTT | C | intron_variant | MODIFIER | HG02015.hp1 HG02055.hp2 HG03139.hp1 others(8): Show |
a0004a0008a0011others(1): Show | a0004c0009a0004c0012a0008c0022others(2): Show | a0004c0009t0004a0004c0009t0005a0004c0012t0001others(6): Show | a0004c0009t0004g0099 a0004c0009t0005g0287 a0004c0009t0005g0293 others(8): Show |
11 | 32 | 0.3438 | -5 | c.120 others(24): Show |
TMPRSS7 | ENSG00000176040.14 | transcript | ENST00000452346.7 | protein_coding | 9/17 | INFO_REALIGN_3_PRIME | chr3 | TogoVar | ||||||
TMPRSS7_chr3_112029736_112086269 | 112073089 | CTTTTT | C | intron_variant | MODIFIER | HG02015.hp1 HG02109.hp2 HG02572.hp1 others(28): Show |
a0001a0004a0012others(2): Show | a0001c0001a0001c0006a0001c0011others(7): Show | a0001c0001t0001a0001c0006t0004a0001c0006t0007others(11): Show | a0001c0001t0001g0214 a0001c0006t0004g0001 a0001c0006t0004g0005 others(22): Show |
31 | 352 | 0.0881 | -5 | c.166 others(24): Show |
TMPRSS7 | ENSG00000176040.14 | transcript | ENST00000452346.7 | protein_coding | 13/17 | INFO_REALIGN_3_PRIME | chr3 | TogoVar | ||||||
TMPRSS9_chr19_2355265_2431261 | 2361468 | GAGTAA | G | intron_variant | MODIFIER | HG02071.hp1 HG02135.hp1 NA18970.hp1 |
a0004a0008 | a0004c0014a0008c0007 | a0004c0014t0003a0008c0007t0003 | a0004c0014t0003g0042 a0004c0014t0003g0044 a0008c0007t0003g0043 |
3 | 112 | 0.0268 | -5 | c.-26 others(22): Show |
TMPRSS9 | ENSG00000178297.15 | transcript | ENST00000696167.1 | protein_coding | 1/18 | INFO_REALIGN_3_PRIME | chr19 | TogoVar | ||||||
TMPRSS9_chr19_2355265_2431261 | 2418438 | TCCCTC | T | intron_variant | MODIFIER | HG00741.hp2 HG01346.hp1 HG03654.hp2 others(2): Show |
a0001 | a0001c0001a0001c0004 | a0001c0001t0001a0001c0004t0002 | a0001c0001t0001g0074 a0001c0001t0001g0093 a0001c0004t0002g0035 others(2): Show |
5 | 110 | 0.0455 | -5 | c.215 others(22): Show |
TMPRSS9 | ENSG00000178297.15 | transcript | ENST00000696167.1 | protein_coding | 14/18 | INFO_REALIGN_3_PRIME | chr19 | TogoVar | ||||||
TMPRSS9_chr19_2355265_2431261 | 2418521 | CCCTCT | C | intron_variant | MODIFIER | HG02809.hp1 HG03209.hp1 HG03486.hp2 |
a0002a0007 | a0002c0005a0007c0024 | a0002c0005t0002a0007c0024t0002 | a0002c0005t0002g0112 a0002c0005t0002g0113 a0007c0024t0002g0114 |
3 | 107 | 0.0280 | -5 | c.215 others(22): Show |
TMPRSS9 | ENSG00000178297.15 | transcript | ENST00000696167.1 | protein_coding | 14/18 | INFO_REALIGN_3_PRIME | chr19 | TogoVar | ||||||
TMPRSS9_chr19_2355265_2431261 | 2418857 | TCCTTC | T | intron_variant | MODIFIER | HG02647.hp2 HG03453.hp2 |
a0014a0019 | a0014c0031a0019c0030 | a0014c0031t0003a0019c0030t0003 | a0014c0031t0003g0108 a0019c0030t0003g0105 |
2 | 109 | 0.0183 | -5 | c.215 others(22): Show |
TMPRSS9 | ENSG00000178297.15 | transcript | ENST00000696167.1 | protein_coding | 14/18 | INFO_REALIGN_3_PRIME | chr19 | TogoVar | ||||||
TMT1A_chr12_50920015_50937508 | 50937475 | TCTGGA | T | downstream_gene_variant | MODIFIER | HG00438.hp1 HG02080.hp1 HG02132.hp1 others(6): Show |
a0001a0002 | a0001c0001a0002c0002 | a0001c0001t0002a0002c0002t0002 | a0001c0001t0002g0027 a0001c0001t0002g0033 a0002c0002t0002g0008 others(1): Show |
9 | 444 | 0.0203 | -5 | c.*73 others(16): Show |
TMT1A | ENSG00000185432.12 | transcript | ENST00000332160.5 | protein_coding | 4968 | chr12 | TogoVar | |||||||
TMTC1_chr12_29495840_29788942 | 29525158 | CTTTTT | C | intron_variant | MODIFIER | HG00099.hp1 HG00099.hp2 HG00140.hp1 others(33): Show |
a0001a0002 | a0001c0001a0001c0002a0001c0005others(2): Show | a0001c0001t0001a0001c0001t0002a0001c0001t0003others(19): Show | a0001c0001t0001g0086 a0001c0001t0001g0147 a0001c0001t0001g0151 others(33): Show |
36 | 37 | 0.9730 | -5 | c.178 others(24): Show |
TMTC1 | ENSG00000133687.16 | transcript | ENST00000539277.6 | protein_coding | 11/17 | chr12 | TogoVar | |||||||
TMTC1_chr12_29495840_29788942 | 29643511 | TATATA | T | intron_variant | MODIFIER | HG00099.hp1 HG00558.hp1 HG00738.hp1 others(49): Show |
a0001a0002 | a0001c0001a0001c0002a0001c0005others(10): Show | a0001c0001t0001a0001c0001t0003a0001c0001t0004others(39): Show | a0001c0001t0001g0080 a0001c0001t0001g0086 a0001c0001t0001g0130 others(49): Show |
52 | 274 | 0.1898 | -5 | c.939 others(24): Show |
TMTC1 | ENSG00000133687.16 | transcript | ENST00000539277.6 | protein_coding | 5/17 | chr12 | TogoVar | |||||||
TMTC1_chr12_29495840_29788942 | 29668454 | CTTTTT | C | intron_variant | MODIFIER | HG00140.hp2 HG00323.hp1 HG00558.hp1 others(78): Show |
a0001a0002a0003others(1): Show | a0001c0001a0001c0002a0001c0005others(14): Show | a0001c0001t0001a0001c0001t0002a0001c0001t0003others(65): Show | a0001c0001t0001g0147 a0001c0001t0002g0149 a0001c0001t0003g0134 others(78): Show |
81 | 115 | 0.7043 | -5 | c.939 others(24): Show |
TMTC1 | ENSG00000133687.16 | transcript | ENST00000539277.6 | protein_coding | 5/17 | chr12 | TogoVar | |||||||
TMTC1_chr12_29495840_29788942 | 29675280 | TAACTC | T | intron_variant | MODIFIER | HG00140.hp1 HG00423.hp2 HG00438.hp1 others(65): Show |
a0001a0002 | a0001c0001a0001c0002a0001c0005others(8): Show | a0001c0001t0001a0001c0001t0002a0001c0001t0003others(44): Show | a0001c0001t0001g0155 a0001c0001t0001g0181 a0001c0001t0002g0089 others(65): Show |
68 | 274 | 0.2482 | -5 | c.939 others(24): Show |
TMTC1 | ENSG00000133687.16 | transcript | ENST00000539277.6 | protein_coding | 5/17 | chr12 | TogoVar | |||||||
TMTC1_chr12_29495840_29788942 | 29693606 | ATTTAT | A | intron_variant | MODIFIER | HG01496.hp1 HG03710.hp2 NA18612.hp1 others(2): Show |
a0001a0002 | a0001c0001a0001c0002a0001c0008others(1): Show | a0001c0001t0014a0001c0002t0001a0001c0002t0003others(2): Show | a0001c0001t0014g0126 a0001c0002t0001g0072 a0001c0002t0003g0070 others(2): Show |
5 | 274 | 0.0182 | -5 | c.938 others(24): Show |
TMTC1 | ENSG00000133687.16 | transcript | ENST00000539277.6 | protein_coding | 5/17 | chr12 | TogoVar | |||||||
TMTC1_chr12_29495840_29788942 | 29694934 | CAACAA | C | intron_variant | MODIFIER | HG00140.hp1 HG00423.hp2 HG00438.hp1 others(65): Show |
a0001a0002 | a0001c0001a0001c0002a0001c0005others(8): Show | a0001c0001t0001a0001c0001t0002a0001c0001t0003others(45): Show | a0001c0001t0001g0155 a0001c0001t0001g0181 a0001c0001t0002g0089 others(65): Show |
68 | 252 | 0.2698 | -5 | c.938 others(24): Show |
TMTC1 | ENSG00000133687.16 | transcript | ENST00000539277.6 | protein_coding | 5/17 | chr12 | TogoVar | |||||||
TMTC1_chr12_29495840_29788942 | 29773420 | AAAAAC | A | intron_variant | MODIFIER | HG00099.hp1 HG00099.hp2 HG00140.hp1 others(231): Show |
a0001a0002a0003others(1): Show | a0001c0001a0001c0002a0001c0005others(17): Show | a0001c0001t0001a0001c0001t0002a0001c0001t0003others(129): Show | a0001c0001t0001g0080 a0001c0001t0001g0086 a0001c0001t0001g0130 others(231): Show |
234 | 274 | 0.8540 | -5 | c.303 others(22): Show |
TMTC1 | ENSG00000133687.16 | transcript | ENST00000539277.6 | protein_coding | 1/17 | chr12 | TogoVar | |||||||
TMTC1_chr12_29495840_29788942 | 29785864 | AAAAAG | A | upstream_gene_variant | MODIFIER | HG01433.hp1 HG02451.hp2 HG02486.hp1 others(4): Show |
a0001 | a0001c0007a0001c0012a0001c0021others(1): Show | a0001c0007t0018a0001c0007t0025a0001c0007t0030others(4): Show | a0001c0007t0018g0017 a0001c0007t0025g0010 a0001c0007t0030g0019 others(4): Show |
7 | 274 | 0.0255 | -5 | c.-21 others(16): Show |
TMTC1 | ENSG00000133687.16 | transcript | ENST00000539277.6 | protein_coding | 1923 | chr12 | TogoVar | |||||||
TMTC2_chr12_82681906_83139866 | 82753452 | AAATAT | A | intron_variant | MODIFIER | HG02809.hp1 NA19030.hp1 |
a0001 | a0001c0001a0001c0005 | a0001c0001t0031a0001c0005t0026 | a0001c0001t0031g0014 a0001c0005t0026g0003 |
2 | 94 | 0.0213 | -5 | c.83+ others(22): Show |
TMTC2 | ENSG00000179104.9 | transcript | ENST00000321196.8 | protein_coding | 1/11 | INFO_REALIGN_3_PRIME | chr12 | TogoVar | ||||||
TMTC2_chr12_82681906_83139866 | 82755865 | AAAAAT | A | intron_variant | MODIFIER | HG01109.hp1 HG02055.hp1 HG02723.hp1 others(4): Show |
a0001a0002 | a0001c0001a0001c0003a0002c0002 | a0001c0001t0003a0001c0001t0010a0001c0003t0001others(2): Show | a0001c0001t0003g0046 a0001c0001t0003g0088 a0001c0001t0010g0017 others(4): Show |
7 | 94 | 0.0745 | -5 | c.83+ others(22): Show |
TMTC2 | ENSG00000179104.9 | transcript | ENST00000321196.8 | protein_coding | 1/11 | INFO_REALIGN_3_PRIME | chr12 | TogoVar | ||||||
TMTC2_chr12_82681906_83139866 | 82765677 | AAAAAC | A | intron_variant | MODIFIER | HG01192.hp2 HG02559.hp2 HG03041.hp2 others(2): Show |
a0001a0002 | a0001c0001a0002c0004 | a0001c0001t0001a0001c0001t0005a0001c0001t0028others(1): Show | a0001c0001t0001g0082 a0001c0001t0001g0083 a0001c0001t0005g0084 others(2): Show |
5 | 94 | 0.0532 | -5 | c.83+ others(22): Show |
TMTC2 | ENSG00000179104.9 | transcript | ENST00000321196.8 | protein_coding | 1/11 | INFO_REALIGN_3_PRIME | chr12 | TogoVar | ||||||
TMTC2_chr12_82681906_83139866 | 82778848 | CAAAAA | C | intron_variant | MODIFIER | HG00639.hp2 HG01109.hp1 HG02723.hp1 others(5): Show |
a0001a0002 | a0001c0001a0001c0003a0002c0002 | a0001c0001t0003a0001c0001t0005a0001c0001t0010others(3): Show | a0001c0001t0003g0041 a0001c0001t0003g0046 a0001c0001t0005g0022 others(5): Show |
8 | 26 | 0.3077 | -5 | c.84- others(22): Show |
TMTC2 | ENSG00000179104.9 | transcript | ENST00000321196.8 | protein_coding | 1/11 | INFO_REALIGN_3_PRIME | chr12 | TogoVar | ||||||
TMTC2_chr12_82681906_83139866 | 82795311 | CAAAAA | C | intron_variant | MODIFIER | HG00639.hp2 HG02055.hp1 HG02280.hp2 others(7): Show |
a0001 | a0001c0001a0001c0003 | a0001c0001t0001a0001c0001t0002a0001c0001t0003others(3): Show | a0001c0001t0001g0030 a0001c0001t0002g0038 a0001c0001t0003g0041 others(7): Show |
10 | 57 | 0.1754 | -5 | c.84- others(22): Show |
TMTC2 | ENSG00000179104.9 | transcript | ENST00000321196.8 | protein_coding | 1/11 | INFO_REALIGN_3_PRIME | chr12 | TogoVar |