Joint Open Genome and Omics Platform (JoGo)

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Snpeff annotation impact detail

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regionname	pos	ref	alt	annotation	impact	samples	ahapids	chapids	thapids	thapids	ac	an	af	len	hgvs_c	genename	geneid	featuretype	featureid	transcript_biotype	rank	distance	status	chr	external
LARP1_chr5_154750377_154822605	154755208	GCGCGCCG others(43): Show GCGCGCCGTCCCGCCGCCTCCTGCCCGCCCGTCGCCCAGGGCCCGGCCAG C	G G	upstream_gene_variant upstream_gene_variant	MODIFIER	HG01884.hp2 NA20129.hp2 HG01884.hp2 NA20129.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0203 a0001c0001t0001g0204 a0001c0001t0001g0203 a0001c0001t0001g0204	2	302	0.0066	-50	c.-54 others(59): Show c.-549_-500delCGCGCCGTCCCGCCGCCTCCTGCCCGCCCGTCGCCC AGGGCCCGGCCAGC	LARP1	ENSG00000155506.19	transcript	ENST00000518297.6	protein_coding		168		chr5	TogoVar
LASP1NB_chr17_38920614_38934381	38930757	TGGGGGGC others(43): Show TGGGGGGCTGACCCCCCCACCTCCCTCCCGGACGGGGCGGCTGGCCGGGC G	T T	downstream_gene_variant downstream_gene_variant	MODIFIER	HG02809.hp2 HG02809.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0002 a0001c0001t0002	a0001c0001t0002g0001 a0001c0001t0002g0001	1	306	0.0033	-50	c.44 others(61): Show c.4462_*4511delGGGGGGCTGACCCCCCCACCTCCCTCCCGGACGG GGCGGCTGGCCGGGCG	LASP1NB	ENSG00000263874.3	transcript	ENST00000583195.3	protein_coding		1377		chr17	TogoVar
LAT2_chr7_74205006_74234834	74214231	TATATATG others(43): Show TATATATGAAAATATATATATAAATATATATATATGAAAATATATATATA A	T T	intron_variant intron_variant	MODIFIER	HG02622.hp1 HG02622.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0270 a0001c0001t0001g0270	1	342	0.0029	-50	c.-21 others(67): Show c.-218-584_-218-535delGAAAATATATATATAAATATATATATAT GAAAATATATATATAAATATAT	LAT2	ENSG00000086730.17	transcript	ENST00000460943.6	protein_coding	1/13		INFO_REALIGN_3_PRIME	chr7	TogoVar
LCTL_chr15_66542532_66570998	66568863	CACACACA others(43): Show CACACACACACACATATATATATATATATATATATATATATATATATATA T	C C	upstream_gene_variant upstream_gene_variant	MODIFIER	HG00738.hp2 HG01516.hp1 NA18962.hp1 HG00738.hp2 HG01516.hp1 NA18962.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0084 a0001c0001t0001g0088 a0001c0001t0001g0165 a0001c0001t0001g0084 a0001c0001t0001g0088 a0001c0001t0001g0165	3	417	0.0072	-50	c.-30 others(61): Show c.-3079_-3030delATATATATATATATATATATATATATATATATAT ATATGTGTGTGTGTGT	LCTL	ENSG00000188501.12	transcript	ENST00000695545.1	protein_coding		2866		chr15	TogoVar
LCTL_chr15_66542532_66570998	66568871	CACACATA others(43): Show CACACATATATATATATATATATATATATATATATATATATATATATATA T	C C	upstream_gene_variant upstream_gene_variant	MODIFIER	HG01891.hp1 HG01891.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0046 a0001c0001t0001g0046	1	334	0.0030	-50	c.-30 others(61): Show c.-3087_-3038delATATATATATATATATATATATATATATATATAT ATATATATATATGTGT	LCTL	ENSG00000188501.12	transcript	ENST00000695545.1	protein_coding		2874		chr15	TogoVar
LDB2_chr4_16496541_16903645	16897896	ATATATAT others(43): Show ATATATATATATATATATATATATATATATATATATATATATACACATAT G	A A	intron_variant intron_variant	MODIFIER	NA18906.hp1 NA18906.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0142 a0001c0001t0001g0142	1	160	0.0063	-50	c.132 others(65): Show c.132+408_132+457delCATATGTGTATATATATATATATATATATA TATATATATATATATATATA	LDB2	ENSG00000169744.13	transcript	ENST00000304523.10	protein_coding	1/7			chr4	TogoVar
LDHAL6A_chr11_18450856_18484601	18467919	ACACACAC others(43): Show ACACACACATATATATATACACACACATATATATATACGTATATATATAC G	A A	intron_variant intron_variant	MODIFIER	NA18964.hp1 NA18964.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0003 a0001c0001t0003	a0001c0001t0003g0061 a0001c0001t0003g0061	1	417	0.0024	-50	c.418 others(67): Show c.418+2110_418+2159delCACACACATATATATATACACACACATA TATATATACGTATATATATACG	LDHAL6A	ENSG00000166800.11	transcript	ENST00000280706.3	protein_coding	3/6			chr11	TogoVar
LETM1_chr4_1806479_1861156	1828052	CCCCCCAC others(43): Show CCCCCCACCTCCCTCCCGGACGGGGCGGCTGGCCGGGCAGGGGGGCTGAC A	C C	intron_variant intron_variant	MODIFIER	HG02258.hp2 HG03471.hp2 NA19043.hp1 HG02258.hp2 HG03471.hp2 NA19043.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0002 a0001c0001t0001 a0001c0001t0002	a0001c0001t0001g0152 a0001c0001t0001g0153 a0001c0001t0002g0151 a0001c0001t0001g0152 a0001c0001t0001g0153 a0001c0001t0002g0151	3	198	0.0152	-50	c.108 others(69): Show c.1081-2419_1081-2370delTGTCAGCCCCCCTGCCCGGCCAGCCG CCCCGTCCGGGAGGGAGGTGGGGG	LETM1	ENSG00000168924.15	transcript	ENST00000302787.3	protein_coding	6/13			chr4	TogoVar
LGALS16_chr19_39650913_39665647	39659145	GTTGGAGG others(43): Show GTTGGAGGGCAGTGACGTGATCTCAGCTCACTGCAACCTCCACCTCCCAG A	G G	intron_variant intron_variant	MODIFIER	HG01516.hp1 HG01516.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0044 a0001c0001t0001g0044	1	440	0.0023	-50	c.303 others(65): Show c.303+478_303+527delGGAGGGCAGTGACGTGATCTCAGCTCACTG CAACCTCCACCTCCCAGATT	LGALS16	ENSG00000249861.4	transcript	ENST00000392051.4	protein_coding	3/3		INFO_REALIGN_3_PRIME	chr19	TogoVar
LGI2_chr4_24993847_25035946	25033261	ACATCTTG others(43): Show ACATCTTGCAGTACTCAGCAAGAATGATCCAGGTCAAAATGTTGCTAGAG C	A A	upstream_gene_variant upstream_gene_variant	MODIFIER	HG03490.hp2 HG03490.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0034 a0001c0001t0001g0034	1	452	0.0022	-50	c.-26 others(61): Show c.-2618_-2569delGCTCTAGCAACATTTTGACCTGGATCATTCTTGC TGAGTACTGCAAGATG	LGI2	ENSG00000153012.12	transcript	ENST00000382114.9	protein_coding		2316		chr4	TogoVar
LHFPL6_chr13_39337892_39608193	39352922	TAAATGTA others(43): Show TAAATGTATATATATGTGTGTATATATATATACATACATACACACACACA C	T T	intron_variant intron_variant	MODIFIER	HG00597.hp2 HG02165.hp1 HG02257.hp2 others(5): Show HG00597.hp2 HG02165.hp1 HG02257.hp2 HG02280.hp2 NA18981.hp2 NA18989.hp2 NA18999.hp2 NA19066.hp2	a0001 a0002 a0001 a0002	a0001c0001 a0002c0004 a0001c0001 a0002c0004	a0001c0001t0002 a0001c0001t0003 a0002c0004t0002 a0001c0001t0002 a0001c0001t0003 a0002c0004t0002	a0001c0001t0002g0051 a0001c0001t0002g0092 a0001c0001t0002g0101 others(5): Show a0001c0001t0002g0051 a0001c0001t0002g0092 a0001c0001t0002g0101 a0001c0001t0002g0165 a0001c0001t0003g0024 a0001c0001t0003g0070 a0001c0001t0003g0090 a0002c0004t0002g0136	8	226	0.0354	-50	c.485 others(67): Show c.485-8918_485-8869delGTGTGTGTGTGTATGTATGTATATATAT ATACACACATATATATACATTT	LHFPL6	ENSG00000183722.9	transcript	ENST00000379589.4	protein_coding	3/3			chr13	TogoVar
LHPP_chr10_124456823_124619141	124507392	TATTTCAG others(43): Show TATTTCAGGTGGGGAGGGTAGGGAGGATTTCAGGTGTGGAGGGTAGACAG G	T T	intron_variant intron_variant	MODIFIER	HG04199.hp1 HG04199.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0180 a0001c0001t0001g0180	1	166	0.0060	-50	c.624 others(67): Show c.624+9278_624+9327delAGGGTAGGGAGGATTTCAGGTGTGGAGG GTAGACAGGATTTCAGGTGGGG	LHPP	ENSG00000107902.14	transcript	ENST00000368842.10	protein_coding	5/6		INFO_REALIGN_3_PRIME	chr10	TogoVar
LHPP_chr10_124456823_124619141	124507623	TGTGGAGG others(43): Show TGTGGAGGGTAGACAGGATTTCAGGTGGGGGGATAGGGAGTATTTCAGGT G	T T	intron_variant intron_variant	MODIFIER	HG02145.hp1 HG04199.hp1 NA18970.hp1 others(1): Show HG02145.hp1 HG04199.hp1 NA18970.hp1 NA19081.hp1	a0001 a0002 a0001 a0002	a0001c0001 a0002c0002 a0001c0001 a0002c0002	a0001c0001t0001 a0002c0002t0001 a0001c0001t0001 a0002c0002t0001	a0001c0001t0001g0067 a0001c0001t0001g0180 a0001c0001t0001g0247 others(1): Show a0001c0001t0001g0067 a0001c0001t0001g0180 a0001c0001t0001g0247 a0002c0002t0001g0145	4	257	0.0156	-50	c.624 others(67): Show c.624+9497_625-9506delTGGAGGGTAGACAGGATTTCAGGTGGGG GGATAGGGAGTATTTCAGGTGG	LHPP	ENSG00000107902.14	transcript	ENST00000368842.10	protein_coding	5/6		INFO_REALIGN_3_PRIME	chr10	TogoVar
LHPP_chr10_124456823_124619141	124507660	GAGTATTT others(43): Show GAGTATTTCAGGTGGGGAGGGTAGACAGGATTTCAGGTGTGGAGGGTAGA C	G G	intron_variant intron_variant	MODIFIER	HG00642.hp1 HG00642.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0173 a0001c0001t0001g0173	1	238	0.0042	-50	c.625 others(67): Show c.625-9517_625-9468delTATTTCAGGTGGGGAGGGTAGACAGGAT TTCAGGTGTGGAGGGTAGACAG	LHPP	ENSG00000107902.14	transcript	ENST00000368842.10	protein_coding	5/6		INFO_REALIGN_3_PRIME	chr10	TogoVar
LHPP_chr10_124456823_124619141	124507746	TGTGGAGG others(43): Show TGTGGAGGGTAGACAGGATTTCAGGTGGGGGGATAGGGAGTATTTCAGGT G	T T	intron_variant intron_variant	MODIFIER	NA18975.hp1 NA18975.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0039 a0001c0001t0001g0039	1	258	0.0039	-50	c.625 others(67): Show c.625-9432_625-9383delTGGAGGGTAGACAGGATTTCAGGTGGGG GGATAGGGAGTATTTCAGGTGG	LHPP	ENSG00000107902.14	transcript	ENST00000368842.10	protein_coding	5/6		INFO_REALIGN_3_PRIME	chr10	TogoVar
LIG3_chr17_34975512_35014743	35003538	GTCCTGAC others(43): Show GTCCTGACCTCAAGTGATCCGCCTGCCTTGGTCTCCCAAAGTGCTGGGAT T	G G	intron_variant intron_variant	MODIFIER	NA18997.hp2 NA18997.hp2	a0001 a0001	a0001c0009 a0001c0009	a0001c0009t0056 a0001c0009t0056	a0001c0009t0056g0193 a0001c0009t0056g0193	1	422	0.0024	-50	c.279 others(67): Show c.2797-734_2797-685delTCCTGACCTCAAGTGATCCGCCTGCCTT GGTCTCCCAAAGTGCTGGGATT	LIG3	ENSG00000005156.12	transcript	ENST00000378526.9	protein_coding	19/19			chr17	TogoVar
LILRA5_chr19_54302070_54318166	54308333	GTGTATAT others(43): Show GTGTATATATATGTATATATAAATATATATATATATATATATATATATAT A	G G	intron_variant intron_variant	MODIFIER	HG03834.hp2 HG03834.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0009 a0001c0001t0009	a0001c0001t0009g0046 a0001c0001t0009g0046	1	401	0.0025	-50	c.713 others(65): Show c.713-635_713-586delTATATATATATATATATATATATATATATT TATATATACATATATATACA	LILRA5	ENSG00000187116.14	transcript	ENST00000432233.8	protein_coding	5/6			chr19	TogoVar
LINGO2_chr9_27932617_29218601	28376993	GGAATATT others(43): Show GGAATATTAAACTAATGTATTTAGATCTCTTGAAATCTAGACATCTACAG A	G G	intron_variant intron_variant	MODIFIER	HG00438.hp2 HG02451.hp1 HG02895.hp1 HG00438.hp2 HG02451.hp1 HG02895.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0019 a0001c0001t0027 a0001c0001t0001 a0001c0001t0019 a0001c0001t0027	a0001c0001t0001g0015 a0001c0001t0019g0053 a0001c0001t0027g0029 a0001c0001t0001g0015 a0001c0001t0019g0053 a0001c0001t0027g0029	3	62	0.0484	-50	c.-22 others(69): Show c.-227-4175_-227-4126delTCTGTAGATGTCTAGATTTCAAGAGA TCTAAATACATTAGTTTAATATTC	LINGO2	ENSG00000174482.11	transcript	ENST00000698399.1	protein_coding	4/6			chr9	TogoVar
LINGO2_chr9_27932617_29218601	28766789	GGAGAGAG others(43): Show GGAGAGAGAGAGAGAGGGAAGGAGAGAGAGAGAGAGAGAGAAGGAGAGAA A	G G	intron_variant intron_variant	MODIFIER	HG01074.hp2 HG02109.hp1 HG02109.hp2 others(7): Show HG01074.hp2 HG02109.hp1 HG02109.hp2 HG02451.hp1 HG02809.hp2 HG02895.hp1 HG02976.hp1 HG03209.hp1 NA19043.hp1 NA19043.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0004 a0001c0001t0010 a0001c0001t0012 others(7): Show a0001c0001t0004 a0001c0001t0010 a0001c0001t0012 a0001c0001t0018 a0001c0001t0019 a0001c0001t0022 a0001c0001t0026 a0001c0001t0027 a0001c0001t0031 a0001c0001t0035	a0001c0001t0004g0039 a0001c0001t0010g0001 a0001c0001t0012g0005 others(7): Show a0001c0001t0004g0039 a0001c0001t0010g0001 a0001c0001t0012g0005 a0001c0001t0018g0014 a0001c0001t0019g0053 a0001c0001t0022g0030 a0001c0001t0026g0036 a0001c0001t0027g0029 a0001c0001t0031g0020 a0001c0001t0035g0060	10	62	0.1613	-50	c.-39 others(71): Show c.-394-96559_-394-96510delTTTCTCTCCTTCTCTCTCTCTCTC TCTCTCCTTCCCTCTCTCTCTCTCTC	LINGO2	ENSG00000174482.11	transcript	ENST00000698399.1	protein_coding	2/6			chr9	TogoVar
LINS1_chr15_100561924_100607184	100583182	CATGGCCC others(43): Show CATGGCCCACTAGCCTAGTCTTGGTCTTACACTGGGTCTTCCATCTACAC T	C C	intron_variant intron_variant	MODIFIER	HG02895.hp2 NA19240.hp1 HG02895.hp2 NA19240.hp1	a0002 a0002	a0002c0002 a0002c0002	a0002c0002t0020 a0002c0002t0020	a0002c0002t0020g0124 a0002c0002t0020g0168 a0002c0002t0020g0124 a0002c0002t0020g0168	2	428	0.0047	-50	c.-10 others(69): Show c.-103-2287_-103-2238delAGTGTAGATGGAAGACCCAGTGTAAG ACCAAGACTAGGCTAGTGGGCCAT	LINS1	ENSG00000140471.17	transcript	ENST00000314742.13	protein_coding	1/6			chr15	TogoVar
LIPG_chr18_49557057_49604185	49577689	CGGGGGGC others(43): Show CGGGGGGCTGACCCCCCAACCTCCCTCCCGGATGGCACGGCTGGCCGGGC G	C C	intron_variant intron_variant	MODIFIER	HG02071.hp1 HG02622.hp2 HG02965.hp1 others(1): Show HG02071.hp1 HG02622.hp2 HG02965.hp1 NA19012.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0038 a0001c0001t0094 a0001c0001t0096 a0001c0001t0038 a0001c0001t0094 a0001c0001t0096	a0001c0001t0038g0045 a0001c0001t0038g0169 a0001c0001t0094g0050 others(1): Show a0001c0001t0038g0045 a0001c0001t0038g0169 a0001c0001t0094g0050 a0001c0001t0096g0049	4	377	0.0106	-50	c.793 others(67): Show c.793+2116_793+2165delAACCTCCCTCCCGGATGGCACGGCTGGC CGGGCGGGGGGGCTGACCCCCC	LIPG	ENSG00000101670.12	transcript	ENST00000261292.9	protein_coding	5/9		INFO_REALIGN_3_PRIME	chr18	TogoVar
LMAN2_chr5_177326567_177356668	177326786	GGAAAGAA others(43): Show GGAAAGAAAGGAAAGAAAGGAAAGAAAGGAAGAAAGAAAGAAAGAAAGAA A	G G	downstream_gene_variant downstream_gene_variant	MODIFIER	HG03098.hp1 HG03098.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0212 a0001c0001t0001g0212	1	371	0.0027	-50	c.52 others(61): Show c.5250_*5299delTTTCTTTCTTTCTTTCTTTCTTCCTTTCTTTCCT TTCTTTCCTTTCTTTC	LMAN2	ENSG00000169223.16	transcript	ENST00000303127.12	protein_coding		4780		chr5	TogoVar
LONRF2_chr2_100266875_100327501	100282797	AAAACTAA others(43): Show AAAACTAAAAGAAAAATTAATAATATTATAAAGTCTTTATCTACTGAAAC T	A A	3_prime_UTR_variant 3_prime_UTR_variant	MODIFIER	HG00140.hp1 HG00280.hp1 HG00323.hp2 others(321): Show HG00140.hp1 HG00280.hp1 HG00323.hp2 HG00423.hp1 HG00423.hp2 HG00438.hp1 HG00544.hp1 HG00544.hp2 HG00558.hp1 HG00558.hp2 HG00597.hp1 HG00597.hp2 HG00609.hp1 HG00609.hp2 HG00621.hp1 HG00621.hp2 HG00639.hp2 HG00642.hp2 HG00673.hp1 HG00673.hp2 HG00735.hp1 HG00735.hp2 HG00738.hp1 HG00738.hp2 HG00741.hp1 HG00741.hp2 HG01069.hp1 HG01071.hp1 HG01074.hp1 HG01074.hp2 HG01081.hp1 HG01081.hp2 HG01099.hp2 HG01123.hp2 HG01169.hp1 HG01169.hp2 HG01175.hp2 HG01192.hp1 HG01192.hp2 HG01243.hp1 HG01243.hp2 HG01255.hp2 HG01256.hp2 HG01257.hp1 HG01257.hp2 HG01258.hp2 HG01261.hp1 HG01261.hp2 HG01346.hp2 HG01358.hp2 HG01361.hp2 HG01433.hp2 HG01516.hp1 HG01516.hp2 HG01884.hp1 HG01884.hp2 HG01891.hp1 HG01891.hp2 HG01928.hp1 HG01934.hp1 HG01952.hp1 HG01952.hp2 HG01975.hp1 HG01975.hp2 HG01981.hp1 HG01993.hp1 HG02015.hp1 HG02015.hp2 HG02027.hp1 HG02027.hp2 HG02040.hp1 HG02040.hp2 HG02055.hp1 HG02055.hp2 HG02056.hp1 HG02056.hp2 HG02074.hp1 HG02074.hp2 HG02080.hp1 HG02080.hp2 HG02083.hp1 HG02083.hp2 HG02109.hp1 HG02109.hp2 HG02129.hp1 HG02129.hp2 HG02132.hp1 HG02132.hp2 HG02135.hp1 HG02135.hp2 HG02148.hp1 HG02148.hp2 HG02165.hp1 HG02165.hp2 HG02257.hp1 HG02257.hp2 HG02258.hp1 HG02273.hp1 HG02273.hp2 HG02280.hp1 HG02280.hp2 HG02293.hp1 HG02293.hp2 HG02300.hp1 HG02300.hp2 HG02451.hp1 HG02451.hp2 HG02486.hp2 HG02559.hp1 HG02559.hp2 HG02572.hp1 HG02572.hp2 HG02602.hp1 HG02602.hp2 HG02615.hp1 HG02615.hp2 HG02622.hp1 HG02622.hp2 HG02630.hp1 HG02630.hp2 HG02683.hp1 HG02683.hp2 HG02698.hp1 HG02717.hp1 HG02717.hp2 HG02723.hp1 HG02723.hp2 HG02735.hp2 HG02738.hp1 HG02809.hp1 HG02809.hp2 HG02886.hp2 HG02895.hp1 HG02895.hp2 HG02896.hp1 HG02896.hp2 HG02897.hp1 HG02897.hp2 HG02922.hp1 HG02922.hp2 HG02965.hp1 HG02965.hp2 HG02970.hp1 HG02970.hp2 HG02976.hp1 HG02976.hp2 HG03017.hp1 HG03017.hp2 HG03041.hp1 HG03041.hp2 HG03098.hp1 HG03098.hp2 HG03130.hp1 HG03130.hp2 HG03139.hp1 HG03139.hp2 HG03195.hp1 HG03195.hp2 HG03209.hp1 HG03209.hp2 HG03225.hp1 HG03225.hp2 HG03239.hp1 HG03239.hp2 HG03453.hp1 HG03453.hp2 HG03471.hp1 HG03471.hp2 HG03486.hp1 HG03486.hp2 HG03491.hp1 HG03491.hp2 HG03492.hp1 HG03492.hp2 HG03516.hp1 HG03516.hp2 HG03540.hp1 HG03540.hp2 HG03579.hp1 HG03579.hp2 HG03654.hp1 HG03654.hp2 HG03688.hp1 HG03704.hp1 HG03704.hp2 HG03710.hp1 HG03710.hp2 HG03831.hp1 HG03831.hp2 HG03834.hp1 HG03927.hp1 HG04115.hp1 HG04115.hp2 HG04184.hp1 HG04184.hp2 HG04204.hp1 HG04204.hp2 HG04228.hp1 HG04228.hp2 HG06807.hp1 HG06807.hp2 NA18522.hp1 NA18522.hp2 NA18612.hp1 NA18612.hp2 NA18747.hp1 NA18747.hp2 NA18906.hp1 NA18906.hp2 NA18939.hp1 NA18939.hp2 NA18941.hp1 NA18941.hp2 NA18944.hp1 NA18944.hp2 NA18945.hp1 NA18945.hp2 NA18946.hp1 NA18946.hp2 NA18948.hp1 NA18948.hp2 NA18951.hp1 NA18952.hp1 NA18952.hp2 NA18953.hp1 NA18953.hp2 NA18954.hp1 NA18954.hp2 NA18955.hp1 NA18955.hp2 NA18957.hp1 NA18957.hp2 NA18959.hp1 NA18959.hp2 NA18960.hp2 NA18961.hp1 NA18961.hp2 NA18962.hp1 NA18962.hp2 NA18964.hp1 NA18964.hp2 NA18966.hp1 NA18966.hp2 NA18969.hp1 NA18969.hp2 NA18973.hp1 NA18973.hp2 NA18974.hp1 NA18974.hp2 NA18977.hp1 NA18977.hp2 NA18978.hp1 NA18978.hp2 NA18979.hp1 NA18979.hp2 NA18980.hp1 NA18980.hp2 NA18983.hp1 NA18983.hp2 NA18985.hp1 NA18985.hp2 NA18986.hp1 NA18986.hp2 NA18991.hp1 NA18991.hp2 NA18992.hp1 NA18992.hp2 NA18993.hp1 NA18993.hp2 NA18994.hp1 NA18994.hp2 NA18998.hp1 NA18998.hp2 NA19003.hp1 NA19003.hp2 NA19004.hp1 NA19004.hp2 NA19005.hp2 NA19007.hp1 NA19007.hp2 NA19009.hp1 NA19010.hp1 NA19010.hp2 NA19030.hp1 NA19030.hp2 NA19057.hp2 NA19060.hp1 NA19060.hp2 NA19062.hp1 NA19063.hp2 NA19064.hp1 NA19064.hp2 NA19065.hp1 NA19065.hp2 NA19066.hp1 NA19066.hp2 NA19068.hp1 NA19068.hp2 NA19076.hp1 NA19076.hp2 NA19079.hp1 NA19079.hp2 NA19083.hp1 NA19084.hp1 NA19084.hp2 NA19085.hp1 NA19085.hp2 NA19087.hp1 NA19087.hp2 NA19088.hp1 NA19091.hp1 NA19091.hp2 NA19240.hp1 NA19240.hp2 NA20129.hp1 NA20129.hp2 NA20300.hp1 NA20300.hp2 NA20752.hp2 NA20805.hp1 NA20805.hp2 NA20905.hp2 NA21309.hp1 NA21309.hp2	a0001 a0002 a0003 others(10): Show a0001 a0002 a0003 a0004 a0005 a0006 a0007 a0008 a0009 a0010 a0011 a0012 a0013	a0001c0002 a0001c0004 a0001c0006 others(24): Show a0001c0002 a0001c0004 a0001c0006 a0001c0008 a0001c0015 a0002c0001 a0002c0005 a0002c0010 a0002c0012 a0002c0013 a0002c0018 a0002c0022 a0002c0023 a0002c0025 a0003c0003 a0004c0007 a0004c0011 a0004c0027 a0005c0009 a0006c0014 a0007c0016 a0008c0017 a0009c0020 a0010c0024 a0011c0019 a0012c0021 a0013c0026	a0001c0002t0002 a0001c0002t0004 a0001c0002t0013 others(121): Show a0001c0002t0002 a0001c0002t0004 a0001c0002t0013 a0001c0002t0020 a0001c0002t0025 a0001c0002t0026 a0001c0002t0027 a0001c0002t0116 a0001c0002t0117 a0001c0002t0118 a0001c0002t0122 a0001c0002t0127 a0001c0002t0129 a0001c0004t0003 a0001c0004t0007 a0001c0004t0014 a0001c0004t0038 a0001c0004t0105 a0001c0004t0106 a0001c0004t0108 a0001c0004t0109 a0001c0004t0110 a0001c0004t0111 a0001c0004t0112 a0001c0004t0113 a0001c0006t0004 a0001c0006t0028 a0001c0006t0120 a0001c0006t0121 a0001c0006t0123 a0001c0006t0130 a0001c0008t0039 a0001c0008t0040 a0001c0008t0041 a0001c0008t0124 a0001c0008t0125 a0001c0015t0003 a0002c0001t0001 a0002c0001t0005 a0002c0001t0006 a0002c0001t0012 a0002c0001t0018 a0002c0001t0019 a0002c0001t0022 a0002c0001t0031 a0002c0001t0032 a0002c0001t0033 a0002c0001t0034 a0002c0001t0042 a0002c0001t0043 a0002c0001t0055 a0002c0001t0056 a0002c0001t0057 a0002c0001t0058 a0002c0001t0059 a0002c0001t0060 a0002c0001t0062 a0002c0001t0064 a0002c0001t0065 a0002c0001t0067 a0002c0001t0068 a0002c0001t0071 a0002c0001t0072 a0002c0001t0073 a0002c0001t0074 a0002c0001t0075 a0002c0001t0076 a0002c0001t0077 a0002c0001t0078 a0002c0001t0079 a0002c0001t0080 a0002c0001t0083 a0002c0001t0084 a0002c0001t0086 a0002c0001t0087 a0002c0001t0090 a0002c0001t0093 a0002c0001t0094 a0002c0001t0095 a0002c0001t0096 a0002c0001t0101 a0002c0001t0102 a0002c0001t0103 a0002c0005t0001 a0002c0005t0021 a0002c0005t0030 a0002c0005t0061 a0002c0005t0063 a0002c0005t0066 a0002c0005t0069 a0002c0010t0005 a0002c0010t0023 a0002c0012t0035 a0002c0012t0088 a0002c0013t0036 a0002c0013t0097 a0002c0018t0037 a0002c0022t0100 a0002c0023t0099 a0002c0025t0098 a0003c0003t0016 a0003c0003t0017 a0003c0003t0024 a0003c0003t0089 a0003c0003t0091 a0003c0003t0092 a0004c0007t0002 a0004c0007t0004 a0004c0007t0114 a0004c0007t0119 a0004c0007t0128 a0004c0011t0004 a0004c0027t0107 a0005c0009t0003 a0006c0014t0001 a0006c0014t0070 a0007c0016t0115 a0008c0017t0081 a0008c0017t0082 a0009c0020t0126 a0010c0024t0006 a0011c0019t0004 a0012c0021t0085 a0013c0026t0001	a0001c0002t0002g0001 a0001c0002t0002g0013 a0001c0002t0002g0022 others(242): Show a0001c0002t0002g0001 a0001c0002t0002g0013 a0001c0002t0002g0022 a0001c0002t0002g0040 a0001c0002t0002g0041 a0001c0002t0002g0203 a0001c0002t0002g0208 a0001c0002t0002g0250 a0001c0002t0002g0253 a0001c0002t0002g0256 a0001c0002t0002g0260 a0001c0002t0002g0261 a0001c0002t0002g0262 a0001c0002t0004g0010 a0001c0002t0004g0221 a0001c0002t0004g0232 a0001c0002t0004g0246 a0001c0002t0004g0251 a0001c0002t0013g0012 a0001c0002t0013g0244 a0001c0002t0013g0245 a0001c0002t0020g0037 a0001c0002t0020g0182 a0001c0002t0020g0183 a0001c0002t0025g0216 a0001c0002t0025g0230 a0001c0002t0025g0248 a0001c0002t0026g0042 a0001c0002t0026g0218 a0001c0002t0027g0020 a0001c0002t0116g0220 a0001c0002t0117g0255 a0001c0002t0118g0254 a0001c0002t0122g0217 a0001c0002t0127g0219 a0001c0002t0129g0252 a0001c0004t0003g0003 a0001c0004t0003g0021 a0001c0004t0003g0206 a0001c0004t0003g0212 a0001c0004t0003g0223 a0001c0004t0003g0227 a0001c0004t0003g0228 a0001c0004t0003g0229 a0001c0004t0003g0235 a0001c0004t0003g0237 a0001c0004t0003g0238 a0001c0004t0003g0239 a0001c0004t0003g0240 a0001c0004t0003g0241 a0001c0004t0003g0242 a0001c0004t0003g0247 a0001c0004t0003g0259 a0001c0004t0007g0005 a0001c0004t0007g0205 a0001c0004t0007g0213 a0001c0004t0007g0215 a0001c0004t0007g0234 a0001c0004t0014g0011 a0001c0004t0014g0222 a0001c0004t0014g0233 a0001c0004t0038g0224 a0001c0004t0038g0236 a0001c0004t0105g0209 a0001c0004t0106g0231 a0001c0004t0108g0202 a0001c0004t0109g0225 a0001c0004t0110g0243 a0001c0004t0111g0211 a0001c0004t0112g0204 a0001c0004t0113g0226 a0001c0006t0004g0009 a0001c0006t0004g0184 a0001c0006t0004g0185 a0001c0006t0004g0191 a0001c0006t0004g0194 a0001c0006t0004g0197 a0001c0006t0004g0199 a0001c0006t0028g0186 a0001c0006t0028g0187 a0001c0006t0028g0188 a0001c0006t0120g0192 a0001c0006t0121g0198 a0001c0006t0123g0189 a0001c0006t0130g0190 a0001c0008t0039g0039 a0001c0008t0040g0038 a0001c0008t0041g0257 a0001c0008t0041g0258 a0001c0008t0124g0249 a0001c0008t0125g0210 a0001c0015t0003g0193 a0001c0015t0003g0195 a0002c0001t0001g0027 a0002c0001t0001g0081 a0002c0001t0001g0083 a0002c0001t0001g0084 a0002c0001t0001g0098 a0002c0001t0001g0116 a0002c0001t0001g0118 a0002c0001t0001g0123 a0002c0001t0001g0124 a0002c0001t0001g0125 a0002c0001t0001g0127 a0002c0001t0001g0130 a0002c0001t0001g0131 a0002c0001t0001g0134 a0002c0001t0001g0137 a0002c0001t0001g0140 a0002c0001t0001g0141 a0002c0001t0001g0156 a0002c0001t0001g0162 a0002c0001t0001g0163 a0002c0001t0005g0002 a0002c0001t0005g0006 a0002c0001t0005g0102 a0002c0001t0005g0135 a0002c0001t0006g0014 a0002c0001t0006g0048 a0002c0001t0006g0050 a0002c0001t0006g0063 a0002c0001t0006g0067 a0002c0001t0006g0070 a0002c0001t0006g0071 a0002c0001t0012g0025 a0002c0001t0012g0033 a0002c0001t0012g0169 a0002c0001t0012g0170 a0002c0001t0018g0024 a0002c0001t0018g0047 a0002c0001t0018g0087 a0002c0001t0019g0064 a0002c0001t0019g0069 a0002c0001t0019g0072 a0002c0001t0019g0171 a0002c0001t0022g0112 a0002c0001t0022g0144 a0002c0001t0022g0149 a0002c0001t0031g0026 a0002c0001t0032g0061 a0002c0001t0032g0062 a0002c0001t0033g0055 a0002c0001t0033g0056 a0002c0001t0034g0164 a0002c0001t0034g0165 a0002c0001t0042g0074 a0002c0001t0043g0073 a0002c0001t0055g0059 a0002c0001t0056g0117 a0002c0001t0057g0166 a0002c0001t0058g0172 a0002c0001t0059g0173 a0002c0001t0060g0145 a0002c0001t0062g0082 a0002c0001t0064g0121 a0002c0001t0065g0139 a0002c0001t0067g0133 a0002c0001t0068g0126 a0002c0001t0071g0095 a0002c0001t0072g0128 a0002c0001t0073g0111 a0002c0001t0074g0129 a0002c0001t0075g0046 a0002c0001t0076g0078 a0002c0001t0077g0079 a0002c0001t0078g0136 a0002c0001t0079g0091 a0002c0001t0080g0132 a0002c0001t0083g0053 a0002c0001t0084g0054 a0002c0001t0086g0089 a0002c0001t0087g0086 a0002c0001t0090g0167 a0002c0001t0093g0168 a0002c0001t0094g0099 a0002c0001t0095g0051 a0002c0001t0096g0085 a0002c0001t0101g0052 a0002c0001t0102g0068 a0002c0001t0103g0065 a0002c0005t0001g0008 a0002c0005t0001g0018 a0002c0005t0001g0036 a0002c0005t0001g0175 a0002c0005t0001g0176 a0002c0005t0021g0034 a0002c0005t0021g0178 a0002c0005t0030g0035 a0002c0005t0061g0181 a0002c0005t0063g0177 a0002c0005t0066g0179 a0002c0005t0069g0180 a0002c0010t0005g0115 a0002c0010t0023g0090 a0002c0010t0023g0119 a0002c0010t0023g0120 a0002c0012t0035g0075 a0002c0012t0035g0076 a0002c0012t0088g0077 a0002c0013t0036g0157 a0002c0013t0036g0158 a0002c0013t0097g0057 a0002c0018t0037g0058 a0002c0018t0037g0174 a0002c0022t0100g0148 a0002c0023t0099g0122 a0002c0025t0098g0080 a0003c0003t0016g0031 a0003c0003t0016g0147 a0003c0003t0016g0152 a0003c0003t0016g0154 a0003c0003t0017g0032 a0003c0003t0017g0109 a0003c0003t0017g0150 a0003c0003t0024g0146 a0003c0003t0024g0151 a0003c0003t0024g0153 a0003c0003t0089g0094 a0003c0003t0091g0088 a0003c0003t0092g0143 a0004c0007t0002g0268 a0004c0007t0004g0043 a0004c0007t0004g0265 a0004c0007t0004g0266 a0004c0007t0004g0270 a0004c0007t0004g0271 a0004c0007t0114g0272 a0004c0007t0119g0269 a0004c0007t0128g0267 a0004c0011t0004g0023 a0004c0011t0004g0264 a0004c0027t0107g0273 a0005c0009t0003g0019 a0005c0009t0003g0196 a0006c0014t0001g0096 a0006c0014t0001g0097 a0006c0014t0070g0155 a0007c0016t0115g0207 a0008c0017t0081g0044 a0008c0017t0082g0045 a0009c0020t0126g0263 a0010c0024t0006g0066 a0011c0019t0004g0201 a0012c0021t0085g0060 a0013c0026t0001g0138	324	366	0.8852	-50	c.14 others(61): Show c.1451_*1500delAGTTTCAGTAGATAAAGACTTTATAATATTATTA ATTTTTCTTTTAGTTT	LONRF2	ENSG00000170500.13	transcript	ENST00000393437.8	protein_coding	12/12	1451		chr2	TogoVar
LPA_chr6_160526482_160669275	160654035	TTATATAT others(43): Show TTATATATAATATATAATATATTATATATATTATATATAATATATATTAT A	T T	intron_variant intron_variant	MODIFIER	HG03704.hp1 HG03704.hp1	a0004 a0004	a0004c0004 a0004c0004	a0004c0004t0001 a0004c0004t0001	a0004c0004t0001g0085 a0004c0004t0001g0085	1	127	0.0079	-50	c.50- others(65): Show c.50-3588_50-3539delTATAATATATATTATATATAATATATATAA TATATTATATATTATATATA	LPA	ENSG00000198670.13	transcript	ENST00000316300.10	protein_coding	1/38			chr6	TogoVar
LPCAT1_chr5_1456427_1528960	1501887	GCACTGAC others(43): Show GCACTGACCAAGGCTGACCGGTGCTGACCAAGGCTGACCAACACTGACCG A	G G	intron_variant intron_variant	MODIFIER	HG03688.hp1 HG03688.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0002 a0001c0001t0002	a0001c0001t0002g0126 a0001c0001t0002g0126	1	384	0.0026	-50	c.136 others(65): Show c.136-334_136-285delTCGGTCAGTGTTGGTCAGCCTTGGTCAGCA CCGGTCAGCCTTGGTCAGTG	LPCAT1	ENSG00000153395.10	transcript	ENST00000283415.4	protein_coding	1/13			chr5	TogoVar
LRBA_chr4_150259435_151020284	150639741	ATATATAT others(43): Show ATATATATATATATATATATATATATATATATATATATATATGTGTGTGT G	A A	intron_variant intron_variant	MODIFIER	HG00423.hp2 HG02132.hp1 HG00423.hp2 HG02132.hp1	a0001 a0003 a0001 a0003	a0001c0001 a0003c0012 a0001c0001 a0003c0012	a0001c0001t0001 a0003c0012t0001 a0001c0001t0001 a0003c0012t0001	a0001c0001t0001g0040 a0003c0012t0001g0089 a0001c0001t0001g0040 a0003c0012t0001g0089	2	178	0.0112	-50	c.592 others(71): Show c.5922-40660_5922-40611delCACACACACATATATATATATATA TATATATATATATATATATATATATA	LRBA	ENSG00000198589.15	transcript	ENST00000651943.2	protein_coding	37/56			chr4	TogoVar
LRBA_chr4_150259435_151020284	150639769	ATATATAT others(43): Show ATATATATATATATGTGTGTGTGTATATATATATATATGTGTGTGTGTGT G	A A	intron_variant intron_variant	MODIFIER	HG01515.hp1 HG01517.hp1 HG02109.hp1 others(6): Show HG01515.hp1 HG01517.hp1 HG02109.hp1 HG02723.hp2 NA18612.hp2 NA18948.hp1 NA18957.hp2 NA18984.hp1 NA19079.hp1	a0001 a0001	a0001c0001 a0001c0005 a0001c0001 a0001c0005	a0001c0001t0001 a0001c0001t0002 a0001c0001t0004 others(1): Show a0001c0001t0001 a0001c0001t0002 a0001c0001t0004 a0001c0005t0002	a0001c0001t0001g0012 a0001c0001t0001g0065 a0001c0001t0001g0098 others(6): Show a0001c0001t0001g0012 a0001c0001t0001g0065 a0001c0001t0001g0098 a0001c0001t0002g0016 a0001c0001t0002g0046 a0001c0001t0002g0153 a0001c0001t0004g0030 a0001c0001t0004g0031 a0001c0005t0002g0162	9	163	0.0552	-50	c.592 others(71): Show c.5922-40688_5922-40639delCACACACACACACATATATATATA TATACACACACACATATATATATATA	LRBA	ENSG00000198589.15	transcript	ENST00000651943.2	protein_coding	37/56			chr4	TogoVar
LRIG2_chr1_113068198_113137260	113069610	AGCCAGCC others(43): Show AGCCAGCCAACCCGTCCGGGAGGGAGATGGGGGGGTCAGCCCCCCCACCC G	A A	upstream_gene_variant upstream_gene_variant	MODIFIER	NA18954.hp2 NA18961.hp1 NA18965.hp1 others(2): Show NA18954.hp2 NA18961.hp1 NA18965.hp1 NA18985.hp1 NA19085.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0016 a0001c0001t0021 a0001c0001t0016 a0001c0001t0021	a0001c0001t0016g0003 a0001c0001t0016g0104 a0001c0001t0016g0108 others(2): Show a0001c0001t0016g0003 a0001c0001t0016g0104 a0001c0001t0016g0108 a0001c0001t0021g0003 a0001c0001t0021g0081	5	266	0.0188	-50	c.-37 others(61): Show c.-3796_-3747delGCCAGCCAACCCGTCCGGGAGGGAGATGGGGGGG TCAGCCCCCCCACCCG	LRIG2	ENSG00000198799.12	transcript	ENST00000361127.6	protein_coding		3587		chr1	TogoVar
LRIG2_chr1_113068198_113137260	113069831	TGCCCGGC others(43): Show TGCCCGGCCAGCCGCCCCGTCCGGGAGGGAGGTGGGGGGGGTCAGCCCCC C	T T	upstream_gene_variant upstream_gene_variant	MODIFIER	HG01928.hp2 HG02273.hp1 HG01928.hp2 HG02273.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0007 a0001c0001t0014 a0001c0001t0007 a0001c0001t0014	a0001c0001t0007g0065 a0001c0001t0014g0094 a0001c0001t0007g0065 a0001c0001t0014g0094	2	266	0.0075	-50	c.-35 others(61): Show c.-3575_-3526delGCCCGGCCAGCCGCCCCGTCCGGGAGGGAGGTGG GGGGGGTCAGCCCCCC	LRIG2	ENSG00000198799.12	transcript	ENST00000361127.6	protein_coding		3366		chr1	TogoVar
LRIG2_chr1_113068198_113137260	113070089	TGGGGGGG others(43): Show TGGGGGGGTCGGCCCCCCGCCCGGCCAGCCGCCCCGTCCGGGAGGGAGGT G	T T	upstream_gene_variant upstream_gene_variant	MODIFIER	HG00099.hp1 HG00099.hp2 HG00140.hp1 others(91): Show HG00099.hp1 HG00099.hp2 HG00140.hp1 HG00280.hp1 HG00280.hp2 HG00597.hp2 HG00609.hp2 HG00639.hp1 HG00639.hp2 HG00673.hp2 HG00735.hp2 HG00738.hp2 HG01071.hp2 HG01074.hp1 HG01074.hp2 HG01081.hp1 HG01109.hp2 HG01256.hp1 HG01256.hp2 HG01257.hp1 HG01258.hp2 HG01346.hp1 HG01358.hp2 HG01361.hp1 HG01496.hp1 HG01515.hp2 HG01516.hp1 HG01516.hp2 HG01884.hp2 HG01891.hp1 HG01928.hp1 HG01928.hp2 HG01934.hp1 HG01952.hp1 HG01975.hp2 HG01993.hp2 HG02071.hp1 HG02165.hp1 HG02165.hp2 HG02273.hp1 HG02293.hp1 HG02300.hp1 HG02559.hp2 HG02602.hp1 HG02602.hp2 HG02622.hp1 HG02683.hp1 HG02683.hp2 HG02735.hp1 HG02735.hp2 HG02818.hp1 HG02886.hp1 HG02896.hp1 HG02897.hp1 HG03017.hp1 HG03098.hp2 HG03239.hp2 HG03704.hp1 HG03704.hp2 HG03942.hp2 HG04228.hp2 HG06807.hp2 NA18747.hp1 NA18747.hp2 NA18940.hp1 NA18945.hp2 NA18946.hp1 NA18948.hp2 NA18951.hp2 NA18954.hp1 NA18954.hp2 NA18955.hp1 NA18960.hp2 NA18961.hp1 NA18964.hp1 NA18972.hp2 NA18986.hp2 NA18991.hp2 NA18993.hp2 NA19002.hp1 NA19005.hp2 NA19011.hp1 NA19030.hp1 NA19057.hp1 NA19079.hp2 NA19081.hp2 NA19083.hp2 NA19084.hp2 NA19085.hp1 NA19085.hp2 NA20129.hp1 NA20805.hp1 NA20905.hp1 NA20905.hp2	a0001 a0003 a0004 a0001 a0003 a0004	a0001c0001 a0001c0008 a0003c0004 others(1): Show a0001c0001 a0001c0008 a0003c0004 a0004c0007	a0001c0001t0001 a0001c0001t0003 a0001c0001t0006 others(28): Show a0001c0001t0001 a0001c0001t0003 a0001c0001t0006 a0001c0001t0007 a0001c0001t0009 a0001c0001t0011 a0001c0001t0012 a0001c0001t0013 a0001c0001t0014 a0001c0001t0015 a0001c0001t0016 a0001c0001t0020 a0001c0001t0021 a0001c0001t0028 a0001c0001t0030 a0001c0001t0032 a0001c0001t0034 a0001c0001t0036 a0001c0001t0038 a0001c0001t0039 a0001c0001t0057 a0001c0001t0058 a0001c0001t0059 a0001c0001t0060 a0001c0001t0063 a0001c0001t0064 a0001c0001t0065 a0001c0001t0068 a0001c0008t0001 a0003c0004t0001 a0004c0007t0061	a0001c0001t0001g0002 a0001c0001t0001g0010 a0001c0001t0001g0016 others(90): Show a0001c0001t0001g0002 a0001c0001t0001g0010 a0001c0001t0001g0016 a0001c0001t0001g0023 a0001c0001t0001g0024 a0001c0001t0001g0026 a0001c0001t0001g0031 a0001c0001t0001g0032 a0001c0001t0001g0033 a0001c0001t0001g0034 a0001c0001t0001g0036 a0001c0001t0001g0037 a0001c0001t0001g0038 a0001c0001t0001g0042 a0001c0001t0001g0044 a0001c0001t0001g0046 a0001c0001t0001g0051 a0001c0001t0001g0059 a0001c0001t0001g0060 a0001c0001t0001g0061 a0001c0001t0001g0063 a0001c0001t0001g0066 a0001c0001t0001g0067 a0001c0001t0001g0068 a0001c0001t0001g0070 a0001c0001t0001g0071 a0001c0001t0001g0072 a0001c0001t0001g0075 a0001c0001t0001g0076 a0001c0001t0001g0079 a0001c0001t0001g0080 a0001c0001t0001g0082 a0001c0001t0001g0085 a0001c0001t0001g0086 a0001c0001t0001g0087 a0001c0001t0001g0088 a0001c0001t0001g0095 a0001c0001t0001g0102 a0001c0001t0001g0109 a0001c0001t0001g0112 a0001c0001t0003g0105 a0001c0001t0003g0107 a0001c0001t0006g0017 a0001c0001t0006g0028 a0001c0001t0006g0029 a0001c0001t0006g0041 a0001c0001t0006g0045 a0001c0001t0006g0049 a0001c0001t0006g0110 a0001c0001t0007g0065 a0001c0001t0007g0084 a0001c0001t0007g0090 a0001c0001t0007g0092 a0001c0001t0007g0113 a0001c0001t0009g0064 a0001c0001t0009g0097 a0001c0001t0009g0098 a0001c0001t0009g0099 a0001c0001t0009g0100 a0001c0001t0011g0103 a0001c0001t0012g0050 a0001c0001t0012g0056 a0001c0001t0012g0057 a0001c0001t0013g0009 a0001c0001t0013g0055 a0001c0001t0014g0094 a0001c0001t0015g0007 a0001c0001t0015g0074 a0001c0001t0015g0077 a0001c0001t0016g0003 a0001c0001t0016g0104 a0001c0001t0020g0020 a0001c0001t0020g0093 a0001c0001t0021g0003 a0001c0001t0028g0047 a0001c0001t0028g0048 a0001c0001t0030g0006 a0001c0001t0032g0027 a0001c0001t0034g0101 a0001c0001t0036g0096 a0001c0001t0038g0089 a0001c0001t0039g0025 a0001c0001t0057g0053 a0001c0001t0058g0052 a0001c0001t0059g0043 a0001c0001t0060g0062 a0001c0001t0063g0054 a0001c0001t0064g0014 a0001c0001t0065g0035 a0001c0001t0068g0021 a0001c0008t0001g0078 a0003c0004t0001g0008 a0004c0007t0061g0039	94	265	0.3547	-50	c.-33 others(61): Show c.-3317_-3268delGGGGGGGTCGGCCCCCCGCCCGGCCAGCCGCCCC GTCCGGGAGGGAGGTG	LRIG2	ENSG00000198799.12	transcript	ENST00000361127.6	protein_coding		3108		chr1	TogoVar
LRP1B_chr2_140226423_142136016	141810095	AAAAGAAA others(43): Show AAAAGAAAGAAAGAAAGAAAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAA G	A A	intron_variant intron_variant	MODIFIER	HG02451.hp2 HG02451.hp2	a0001 a0001	a0001c0012 a0001c0012	a0001c0012t0003 a0001c0012t0003	a0001c0012t0003g0005 a0001c0012t0003g0005	1	16	0.0625	-50	c.205 others(65): Show c.205+134_205+183delCTTTCTTTCTTTCTTTCTTTCTTTCTTTCT TTTTCTTTCTTTCTTTCTTT	LRP1B	ENSG00000168702.18	transcript	ENST00000389484.8	protein_coding	2/90			chr2	TogoVar
LRRC27_chr10_132327193_132386508	132352082	GCTCCGTG others(43): Show GCTCCGTGTGGGGCAGATGCTGAGGCCTCCGTGTGGGGCAGGCGCTGAGG C	G G	intron_variant intron_variant	MODIFIER	HG02698.hp2 HG03704.hp2 HG02698.hp2 HG03704.hp2	a0001 a0001	a0001c0011 a0001c0011	a0001c0011t0001 a0001c0011t0001	a0001c0011t0001g0110 a0001c0011t0001g0111 a0001c0011t0001g0110 a0001c0011t0001g0111	2	286	0.0070	-50	c.107 others(67): Show c.1073+345_1073+394delATGCTGAGGCCTCCGTGTGGGGCAGGCG CTGAGGCCTCCGTGTGGGGCAG	LRRC27	ENSG00000148814.18	transcript	ENST00000368614.8	protein_coding	7/10		INFO_REALIGN_3_PRIME	chr10	TogoVar
LRRC27_chr10_132327193_132386508	132352099	TGCTGAGG others(43): Show TGCTGAGGCCTCCGTGTGGGGCAGGCGCTGAGGCCTCCGTGTGGGGCAGG C	T T	intron_variant intron_variant	MODIFIER	HG02922.hp2 HG02965.hp2 HG03516.hp2 others(1): Show HG02922.hp2 HG02965.hp2 HG03516.hp2 HG03579.hp2	a0001 a0001	a0001c0001 a0001c0009 a0001c0001 a0001c0009	a0001c0001t0002 a0001c0001t0021 a0001c0001t0047 others(1): Show a0001c0001t0002 a0001c0001t0021 a0001c0001t0047 a0001c0009t0002	a0001c0001t0002g0277 a0001c0001t0021g0276 a0001c0001t0047g0278 others(1): Show a0001c0001t0002g0277 a0001c0001t0021g0276 a0001c0001t0047g0278 a0001c0009t0002g0275	4	255	0.0157	-50	c.107 others(67): Show c.1073+421_1073+470delCGCTGAGGCCTCCGTGTGGGGCAGGCGC TGAGGCCTCCGTGTGGGGCAGG	LRRC27	ENSG00000148814.18	transcript	ENST00000368614.8	protein_coding	7/10		INFO_REALIGN_3_PRIME	chr10	TogoVar
LRRC47_chr1_3773559_3801498	3800476	GCTCTGTG others(43): Show GCTCTGTGGTGCCGCCTGGGTCTCTGTGCCATCTGGACCTAACACAGGTC A	G G	upstream_gene_variant upstream_gene_variant	MODIFIER	HG01257.hp2 HG01257.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0010 a0001c0001t0001g0010	1	390	0.0026	-50	c.-40 others(61): Show c.-4050_-4001delTGACCTGTGTTAGGTCCAGATGGCACAGAGACCC AGGCGGCACCACAGAG	LRRC47	ENSG00000130764.10	transcript	ENST00000378251.3	protein_coding		3979		chr1	TogoVar
LRRC7_chr1_69562922_70149364	69717804	AAGAAAGA others(43): Show AAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAAAAGAAAGAAAG G	A A	intron_variant intron_variant	MODIFIER	HG01167.hp1 HG02055.hp1 HG02559.hp2 others(4): Show HG01167.hp1 HG02055.hp1 HG02559.hp2 HG02572.hp2 HG02809.hp1 HG02922.hp1 HG02922.hp2	a0001 a0003 a0001 a0003	a0001c0001 a0001c0004 a0003c0007 a0001c0001 a0001c0004 a0003c0007	a0001c0001t0003 a0001c0001t0023 a0001c0001t0063 others(4): Show a0001c0001t0003 a0001c0001t0023 a0001c0001t0063 a0001c0001t0068 a0001c0004t0057 a0001c0004t0060 a0003c0007t0054	a0001c0001t0003g0022 a0001c0001t0023g0036 a0001c0001t0063g0057 others(4): Show a0001c0001t0003g0022 a0001c0001t0023g0036 a0001c0001t0063g0057 a0001c0001t0068g0069 a0001c0004t0057g0060 a0001c0004t0060g0059 a0003c0007t0054g0048	7	106	0.0660	-50	c.100 others(69): Show c.100+39328_100+39377delGAAAGAAAGAAAGAAAGAAAGAAAGA AAGAAAGAAAAAAGAAAGAAAGGA	LRRC7	ENSG00000033122.21	transcript	ENST00000651989.2	protein_coding	2/26		INFO_REALIGN_3_PRIME	chr1	TogoVar
LRRC9_chr14_59915144_60071817	59975090	TATATATA others(43): Show TATATATATATACATATATATATGTATATATATATATGTATATATATATA C	T T	intron_variant intron_variant	MODIFIER	NA19004.hp1 NA19004.hp1	a0002 a0002	a0002c0003 a0002c0003	a0002c0003t0005 a0002c0003t0005	a0002c0003t0005g0197 a0002c0003t0005g0197	1	320	0.0031	-50	c.163 others(67): Show c.1639+393_1639+442delACATATATATATGTATATATATATATGT ATATATATATACATATATATAT	LRRC9	ENSG00000131951.12	transcript	ENST00000570145.2	protein_coding	13/32		INFO_REALIGN_3_PRIME	chr14	TogoVar
LRRC9_chr14_59915144_60071817	59975101	ACATATAT others(43): Show ACATATATATATGTATATATATATATGTATATATATATACATATATATAT G	A A	intron_variant intron_variant	MODIFIER	HG02572.hp1 HG02717.hp1 HG02572.hp1 HG02717.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0016 a0001c0001t0001g0091 a0001c0001t0001g0016 a0001c0001t0001g0091	2	320	0.0063	-50	c.163 others(67): Show c.1639+394_1639+443delCATATATATATGTATATATATATATGTA TATATATATACATATATATATG	LRRC9	ENSG00000131951.12	transcript	ENST00000570145.2	protein_coding	13/32			chr14	TogoVar
LRTM2_chr12_1815565_1841753	1840284	GCCCGCCA others(43): Show GCCCGCCAGCCTTTCTTTCAGCTACAGAATGCCTCAGTAATGCTCTATTA A	G G	downstream_gene_variant downstream_gene_variant	MODIFIER	HG02602.hp2 HG02738.hp1 HG02602.hp2 HG02738.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0003 a0001c0001t0046 a0001c0001t0003 a0001c0001t0046	a0001c0001t0003g0304 a0001c0001t0046g0274 a0001c0001t0003g0304 a0001c0001t0046g0274	2	460	0.0043	-50	c.55 others(61): Show c.5564_*5613delCCCGCCAGCCTTTCTTTCAGCTACAGAATGCCTC AGTAATGCTCTATTAA	LRTM2	ENSG00000166159.11	transcript	ENST00000299194.6	protein_coding		3532		chr12	TogoVar
LSG1_chr3_194635791_194677191	194645525	CACACAGA others(43): Show CACACAGACAGACACACACACACACACACACACACACACACACACAGACA G	C C	intron_variant intron_variant	MODIFIER	NA18944.hp1 NA18944.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0011 a0001c0001t0011	a0001c0001t0011g0271 a0001c0001t0011g0271	1	398	0.0025	-50	c.162 others(67): Show c.1623+589_1623+638delCTGTCTGTGTGTGTGTGTGTGTGTGTGT GTGTGTGTGTGTCTGTCTGTGT	LSG1	ENSG00000041802.11	transcript	ENST00000265245.10	protein_coding	12/13			chr3	TogoVar
LUZP2_chr11_24492053_25087638	24926306	TGTGTATA others(43): Show TGTGTATATATATACGTGTGTGTATATATATATACGTGTGTATATATATA C	T T	intron_variant intron_variant	MODIFIER	HG02280.hp2 HG02717.hp2 HG03471.hp1 others(1): Show HG02280.hp2 HG02717.hp2 HG03471.hp1 HG06807.hp1	a0001 a0001	a0001c0001 a0001c0003 a0001c0001 a0001c0003	a0001c0001t0004 a0001c0001t0036 a0001c0003t0015 a0001c0001t0004 a0001c0001t0036 a0001c0003t0015	a0001c0001t0004g0105 a0001c0001t0036g0110 a0001c0003t0015g0069 others(1): Show a0001c0001t0004g0105 a0001c0001t0036g0110 a0001c0003t0015g0069 a0001c0003t0015g0091	4	112	0.0357	-50	c.522 others(69): Show c.522+11773_522+11822delATATATATACGTGTGTGTATATATAT ATACGTGTGTATATATATACGTGT	LUZP2	ENSG00000187398.12	transcript	ENST00000336930.11	protein_coding	7/11		INFO_REALIGN_3_PRIME	chr11	TogoVar
LY6D_chr8_142779882_142791539	142789598	GGGGCCCT others(43): Show GGGGCCCTGGGCTGGAGGAGCTGGCTGAGTGGGTGCCTGGTGGACAAGTC A	G G	upstream_gene_variant upstream_gene_variant	MODIFIER	HG01106.hp2 HG01346.hp2 HG01981.hp2 others(46): Show HG01106.hp2 HG01346.hp2 HG01981.hp2 HG02015.hp1 HG02257.hp2 HG02602.hp1 HG02622.hp1 HG02630.hp2 HG02723.hp1 HG02970.hp1 HG03486.hp1 HG03491.hp2 HG03688.hp1 HG04228.hp1 NA18747.hp1 NA18940.hp2 NA18946.hp2 NA18955.hp2 NA18957.hp1 NA18959.hp2 NA18961.hp1 NA18966.hp1 NA18970.hp2 NA18971.hp1 NA18972.hp1 NA18979.hp2 NA18983.hp1 NA18986.hp1 NA18990.hp2 NA18991.hp1 NA18992.hp2 NA18999.hp2 NA19002.hp1 NA19003.hp2 NA19004.hp2 NA19012.hp1 NA19054.hp1 NA19057.hp2 NA19064.hp1 NA19066.hp2 NA19067.hp2 NA19070.hp1 NA19077.hp1 NA19079.hp1 NA19083.hp2 NA19085.hp1 NA19090.hp1 NA20300.hp1 NA20805.hp2	a0001 a0004 a0001 a0004	a0001c0001 a0001c0003 a0001c0007 others(1): Show a0001c0001 a0001c0003 a0001c0007 a0004c0005	a0001c0001t0001 a0001c0003t0001 a0001c0007t0001 others(1): Show a0001c0001t0001 a0001c0003t0001 a0001c0007t0001 a0004c0005t0001	a0001c0001t0001g0003 a0001c0001t0001g0009 a0001c0003t0001g0011 others(3): Show a0001c0001t0001g0003 a0001c0001t0001g0009 a0001c0003t0001g0011 a0001c0003t0001g0017 a0001c0007t0001g0018 a0004c0005t0001g0019	49	432	0.1134	-50	c.-31 others(61): Show c.-3132_-3083delTGACTTGTCCACCAGGCACCCACTCAGCCAGCTC CTCCAGCCCAGGGCCC	LY6D	ENSG00000167656.5	transcript	ENST00000301263.5	protein_coding		3060		chr8	TogoVar
LYPD5_chr19_43790927_43807447	43798159	TTGCCTCC others(43): Show TTGCCTCCTCCCTCAGACCAGGGTCATGCCTCCTCCCTCAGACCAGGGTC A	T T	intron_variant intron_variant	MODIFIER	HG01261.hp1 HG02145.hp2 HG02615.hp2 others(2): Show HG01261.hp1 HG02145.hp2 HG02615.hp2 HG02723.hp2 HG02818.hp1	a0001 a0004 a0001 a0004	a0001c0004 a0004c0007 a0001c0004 a0004c0007	a0001c0004t0004 a0004c0007t0015 a0001c0004t0004 a0004c0007t0015	a0001c0004t0004g0017 a0004c0007t0015g0049 a0004c0007t0015g0050 a0001c0004t0004g0017 a0004c0007t0015g0049 a0004c0007t0015g0050	5	319	0.0157	-50	c.517 others(65): Show c.517+246_517+295delTGACCCTGGTCTGAGGGAGGAGGCATGACC CTGGTCTGAGGGAGGAGGCA	LYPD5	ENSG00000159871.15	transcript	ENST00000377950.8	protein_coding	4/4			chr19	TogoVar
LYZL6_chr17_35929518_35948713	35938646	CCCACAAA others(43): Show CCCACAAAGCAAGATTAAAGGACAAAAGTGTTGCAAGACAGGTGCACACA A	C C	intron_variant intron_variant	MODIFIER	HG00741.hp2 HG00741.hp2	a0002 a0002	a0002c0003 a0002c0003	a0002c0003t0001 a0002c0003t0001	a0002c0003t0001g0004 a0002c0003t0001g0004	1	414	0.0024	-50	c.139 others(65): Show c.139+522_139+571delTTGTGTGCACCTGTCTTGCAACACTTTTGT CCTTTAATCTTGCTTTGTGG	LYZL6	ENSG00000275722.5	transcript	ENST00000615905.5	protein_coding	2/4			chr17	TogoVar
MAD1L1_chr7_1810795_2237945	1871214	ACCTGCCA others(43): Show ACCTGCCACGCTGAACCCAACATACGCCTGCCACGCTGAACCCAACATAA G	A A	intron_variant intron_variant	MODIFIER	HG02896.hp1 HG03225.hp1 HG02896.hp1 HG03225.hp1	a0001 a0001	a0001c0006 a0001c0006	a0001c0006t0001 a0001c0006t0001	a0001c0006t0001g0158 a0001c0006t0001g0218 a0001c0006t0001g0158 a0001c0006t0001g0218	2	262	0.0076	-50	c.199 others(71): Show c.1998+26936_1998+26985delCTTATGTTGGGTTCAGCGTGGCAG GCGTATGTTGGGTTCAGCGTGGCAGG	MAD1L1	ENSG00000002822.16	transcript	ENST00000265854.12	protein_coding	18/18			chr7	TogoVar
MAD1L1_chr7_1810795_2237945	1934781	GAACCCGA others(43): Show GAACCCGAGACAGGCAGACACCCAGACAACAGGGGAACAAACAGATGGGC A	G G	intron_variant intron_variant	MODIFIER	HG02451.hp2 HG02451.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0167 a0001c0001t0001g0167	1	262	0.0038	-50	c.180 others(69): Show c.1807+1856_1807+1905delTGCCCATCTGTTTGTTCCCCTGTTGT CTGGGTGTCTGCCTGTCTCGGGTT	MAD1L1	ENSG00000002822.16	transcript	ENST00000265854.12	protein_coding	17/18			chr7	TogoVar
MADCAM1_chr19_491486_510343	493906	TTGTCTCT others(43): Show TTGTCTCTCTTCCTTGATCTGTCTCTCCCTCTCTGTGTCTCTGTCTCCCT A	T T	upstream_gene_variant upstream_gene_variant	MODIFIER	HG02809.hp2 HG02809.hp2	a0004 a0004	a0004c0007 a0004c0007	a0004c0007t0001 a0004c0007t0001	a0004c0007t0001g0153 a0004c0007t0001g0153	1	362	0.0028	-50	c.-25 others(61): Show c.-2593_-2544delTGTCTCTCTTCCTTGATCTGTCTCTCCCTCTCTG TGTCTCTGTCTCCCTA	MADCAM1	ENSG00000099866.16	transcript	ENST00000215637.8	protein_coding		2579		chr19	TogoVar
MAGEB10_chrX_27802990_27828014	27809487	CCCCCCCG others(43): Show CCCCCCCGCCCCGCCCGCCCCCCCCCCCGCCCGCCCCCCCCCCGCCGCCG G	C C	intron_variant intron_variant	MODIFIER	HG01074.hp1 HG01074.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0001 a0001c0001t0001g0001	1	246	0.0041	-50	c.-19 others(69): Show c.-199+1457_-199+1506delCGCCCCGCCCGCCCCCCCCCCCGCCC GCCCCCCCCCCGCCGCCGGCCCCC	MAGEB10	ENSG00000177689.10	transcript	ENST00000356790.2	protein_coding	1/2		INFO_REALIGN_3_PRIME	chrX	TogoVar
MAN1A2_chr1_117362449_117533872	117430070	TGGGTGGG others(43): Show TGGGTGGGGGTGCTGACCCCCCCATCTCCCTCCCGGACGGGGTAGCTGGC C	T T	intron_variant intron_variant	MODIFIER	HG03041.hp1 HG03041.hp1	a0001 a0001	a0001c0004 a0001c0004	a0001c0004t0002 a0001c0004t0002	a0001c0004t0002g0228 a0001c0004t0002g0228	1	109	0.0092	-50	c.855 others(67): Show c.855+9425_855+9474delTGGGGGTGCTGACCCCCCCATCTCCCTC CCGGACGGGGTAGCTGGCCGGG	MAN1A2	ENSG00000198162.12	transcript	ENST00000356554.7	protein_coding	5/12		INFO_REALIGN_3_PRIME	chr1	TogoVar
MAN1B1_chr9_137081985_137114183	137104853	CACCTGCC others(43): Show CACCTGCCTGAGGCTGTGTTTTGGGTGTTGTGAGTGTGGGTGCACACACC T	C C	intron_variant intron_variant	MODIFIER	HG02602.hp1 HG02602.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0003 a0001c0001t0003	a0001c0001t0003g0148 a0001c0001t0003g0148	1	404	0.0025	-50	c.125 others(69): Show c.1255-1271_1255-1222delACCTGCCTGAGGCTGTGTTTTGGGTG TTGTGAGTGTGGGTGCACACACCT	MAN1B1	ENSG00000177239.16	transcript	ENST00000371589.9	protein_coding	8/12			chr9	TogoVar
MAP2K3_chr17_21279711_21320232	21295932	GCTGGGGG others(43): Show GCTGGGGGCAAGGTCAAGGCCCAGGGTCTCTGTGCAGAGCTTTAATTTTT A	G G	intron_variant intron_variant	MODIFIER	HG00544.hp2 HG00544.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0091 a0001c0001t0001g0091	1	364	0.0027	-50	c.50- others(65): Show c.50-2480_50-2431delCTGGGGGCAAGGTCAAGGCCCAGGGTCTCT GTGCAGAGCTTTAATTTTTA	MAP2K3	ENSG00000034152.20	transcript	ENST00000342679.9	protein_coding	1/11			chr17	TogoVar

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