Joint Open Genome and Omics Platform (JoGo)

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ALDH2_chr12_111761933_111822532 / BRCA1_chr17_43039295_43130364 etc.

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Snpeff genename

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Snpeff haplotype class

Snpeff annotation impact

Snpeff annotation impact detail

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regionname	pos	ref	alt	annotation	impact	samples	ahapids	chapids	thapids	thapids	ac	an	af	len	hgvs_c	hgvs_p	genename	geneid	featuretype	featureid	transcript_biotype	rank	cdna cdna pos length	cds cds pos length	aa aa pos length	distance	status	chr	external
RSRC1_chr3_158105089_158550730	158334649	TTGTGTG TTGTGTG	T T	intron_variant intron_variant	MODIFIER	HG01123.hp2 HG02683.hp2 HG03195.hp1 others(2): Show HG01123.hp2 HG02683.hp2 HG03195.hp1 HG03688.hp1 HG04199.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0002 a0001c0001t0007 a0001c0001t0001 a0001c0001t0002 a0001c0001t0007	a0001c0001t0001g0244 a0001c0001t0002g0241 a0001c0001t0002g0245 others(2): Show a0001c0001t0001g0244 a0001c0001t0002g0241 a0001c0001t0002g0245 a0001c0001t0002g0246 a0001c0001t0007g0044	5	276	0.0181	-6	c.532 others(25): Show c.532-20176_532-20171delGTGTGT		RSRC1	ENSG00000174891.14	transcript	ENST00000611884.5	protein_coding	5/9					INFO_REALIGN_3_PRIME	chr3	TogoVar
RSRC1_chr3_158105089_158550730	158364816	AAATAAT AAATAAT	A A	intron_variant intron_variant	MODIFIER	HG01891.hp2 HG02258.hp1 HG02258.hp2 others(14): Show HG01891.hp2 HG02258.hp1 HG02258.hp2 HG02280.hp1 HG02572.hp1 HG02572.hp2 HG02809.hp2 HG02886.hp1 HG02895.hp1 HG03130.hp1 HG03195.hp1 HG03225.hp1 HG03225.hp2 HG03516.hp2 HG03579.hp1 NA18948.hp1 NA19240.hp1	a0001 a0005 a0001 a0005	a0001c0001 a0005c0003 a0001c0001 a0005c0003	a0001c0001t0001 a0001c0001t0002 a0001c0001t0006 others(5): Show a0001c0001t0001 a0001c0001t0002 a0001c0001t0006 a0001c0001t0007 a0001c0001t0009 a0001c0001t0021 a0001c0001t0022 a0005c0003t0002	a0001c0001t0001g0081 a0001c0001t0002g0007 a0001c0001t0002g0032 others(14): Show a0001c0001t0001g0081 a0001c0001t0002g0007 a0001c0001t0002g0032 a0001c0001t0002g0251 a0001c0001t0002g0252 a0001c0001t0002g0253 a0001c0001t0006g0250 a0001c0001t0007g0044 a0001c0001t0009g0006 a0001c0001t0009g0009 a0001c0001t0009g0010 a0001c0001t0009g0011 a0001c0001t0009g0012 a0001c0001t0009g0034 a0001c0001t0021g0035 a0001c0001t0022g0008 a0005c0003t0002g0033	17	276	0.0616	-6	c.583 others(23): Show c.583+9937_583+9942delATAATA		RSRC1	ENSG00000174891.14	transcript	ENST00000611884.5	protein_coding	6/9					INFO_REALIGN_3_PRIME	chr3	TogoVar
RSRC1_chr3_158105089_158550730	158375159	GTTATTA GTTATTA	G G	intron_variant intron_variant	MODIFIER	HG00738.hp1 HG01346.hp2 HG01358.hp2 others(17): Show HG00738.hp1 HG01346.hp2 HG01358.hp2 HG01884.hp1 HG02129.hp2 HG02559.hp1 HG02886.hp2 HG02895.hp2 HG02897.hp1 HG02922.hp2 HG03209.hp2 HG03491.hp2 HG03492.hp1 HG03516.hp1 HG03831.hp1 HG04204.hp1 NA18982.hp2 NA18999.hp1 NA19058.hp1 NA19070.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0002 a0001c0001t0007 others(4): Show a0001c0001t0001 a0001c0001t0002 a0001c0001t0007 a0001c0001t0010 a0001c0001t0011 a0001c0001t0012 a0001c0001t0019	a0001c0001t0001g0161 a0001c0001t0001g0162 a0001c0001t0001g0259 others(17): Show a0001c0001t0001g0161 a0001c0001t0001g0162 a0001c0001t0001g0259 a0001c0001t0001g0260 a0001c0001t0002g0257 a0001c0001t0002g0261 a0001c0001t0002g0265 a0001c0001t0002g0266 a0001c0001t0007g0181 a0001c0001t0007g0182 a0001c0001t0007g0188 a0001c0001t0010g0195 a0001c0001t0011g0171 a0001c0001t0011g0172 a0001c0001t0011g0183 a0001c0001t0012g0262 a0001c0001t0012g0264 a0001c0001t0019g0049 a0001c0001t0019g0159 a0001c0001t0019g0163	20	276	0.0725	-6	c.583 others(25): Show c.583+20288_583+20293delTTATTA		RSRC1	ENSG00000174891.14	transcript	ENST00000611884.5	protein_coding	6/9					INFO_REALIGN_3_PRIME	chr3	TogoVar
RSRC1_chr3_158105089_158550730	158377865	TGGCCAG TGGCCAG	T T	intron_variant intron_variant	MODIFIER	HG02258.hp2 HG02572.hp2 HG02895.hp1 others(4): Show HG02258.hp2 HG02572.hp2 HG02895.hp1 HG03130.hp1 HG03195.hp1 HG03225.hp1 HG03225.hp2	a0001 a0005 a0001 a0005	a0001c0001 a0005c0003 a0001c0001 a0005c0003	a0001c0001t0002 a0001c0001t0006 a0001c0001t0007 others(1): Show a0001c0001t0002 a0001c0001t0006 a0001c0001t0007 a0005c0003t0002	a0001c0001t0002g0032 a0001c0001t0002g0251 a0001c0001t0002g0252 others(4): Show a0001c0001t0002g0032 a0001c0001t0002g0251 a0001c0001t0002g0252 a0001c0001t0002g0253 a0001c0001t0006g0250 a0001c0001t0007g0044 a0005c0003t0002g0033	7	276	0.0254	-6	c.583 others(25): Show c.583+22959_583+22964delGCCAGG		RSRC1	ENSG00000174891.14	transcript	ENST00000611884.5	protein_coding	6/9					INFO_REALIGN_3_PRIME	chr3	TogoVar
RSRC1_chr3_158105089_158550730	158455979	CAAAAAA CAAAAAA	C C	intron_variant intron_variant	MODIFIER	HG00544.hp1 HG00558.hp1 HG00639.hp2 others(32): Show HG00544.hp1 HG00558.hp1 HG00639.hp2 HG00741.hp2 HG01069.hp2 HG01070.hp2 HG01071.hp1 HG01123.hp1 HG01255.hp1 HG01517.hp1 HG02132.hp1 HG03490.hp1 HG03492.hp2 HG03688.hp2 HG04184.hp2 HG04199.hp2 HG06807.hp1 NA18906.hp2 NA18948.hp2 NA18952.hp1 NA18961.hp1 NA18962.hp1 NA18968.hp1 NA18977.hp1 NA18982.hp1 NA18984.hp2 NA18999.hp2 NA19011.hp2 NA19057.hp2 NA19072.hp1 NA19079.hp2 NA19087.hp2 NA20300.hp1 NA20805.hp2 NA20905.hp2	a0001 a0002 a0004 a0001 a0002 a0004	a0001c0001 a0002c0002 a0004c0004 a0001c0001 a0002c0002 a0004c0004	a0001c0001t0002 a0001c0001t0003 a0001c0001t0005 others(9): Show a0001c0001t0002 a0001c0001t0003 a0001c0001t0005 a0001c0001t0008 a0001c0001t0013 a0001c0001t0017 a0001c0001t0018 a0001c0001t0029 a0001c0001t0030 a0001c0001t0032 a0002c0002t0017 a0004c0004t0005	a0001c0001t0002g0242 a0001c0001t0003g0046 a0001c0001t0003g0119 others(32): Show a0001c0001t0002g0242 a0001c0001t0003g0046 a0001c0001t0003g0119 a0001c0001t0003g0125 a0001c0001t0003g0129 a0001c0001t0003g0132 a0001c0001t0003g0134 a0001c0001t0003g0135 a0001c0001t0003g0146 a0001c0001t0003g0151 a0001c0001t0003g0158 a0001c0001t0005g0045 a0001c0001t0005g0124 a0001c0001t0005g0128 a0001c0001t0005g0136 a0001c0001t0005g0138 a0001c0001t0005g0148 a0001c0001t0005g0149 a0001c0001t0008g0112 a0001c0001t0008g0117 a0001c0001t0008g0121 a0001c0001t0008g0130 a0001c0001t0008g0133 a0001c0001t0008g0157 a0001c0001t0013g0047 a0001c0001t0017g0113 a0001c0001t0018g0139 a0001c0001t0018g0141 a0001c0001t0018g0145 a0001c0001t0029g0152 a0001c0001t0030g0155 a0001c0001t0032g0122 a0002c0002t0017g0114 a0002c0002t0017g0115 a0004c0004t0005g0120	35	276	0.1268	-6	c.584 others(23): Show c.584-4926_584-4921delAAAAAA		RSRC1	ENSG00000174891.14	transcript	ENST00000611884.5	protein_coding	6/9					INFO_REALIGN_3_PRIME	chr3	TogoVar
RSRC1_chr3_158105089_158550730	158470357	CACACAT CACACAT	C C	intron_variant intron_variant	MODIFIER	HG01891.hp2 HG02258.hp1 HG02280.hp1 others(3): Show HG01891.hp2 HG02258.hp1 HG02280.hp1 HG03516.hp2 NA18983.hp2 NA19240.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0009 a0001c0001t0022 a0001c0001t0001 a0001c0001t0009 a0001c0001t0022	a0001c0001t0001g0174 a0001c0001t0009g0006 a0001c0001t0009g0009 others(3): Show a0001c0001t0001g0174 a0001c0001t0009g0006 a0001c0001t0009g0009 a0001c0001t0009g0010 a0001c0001t0009g0011 a0001c0001t0022g0008	6	276	0.0217	-6	c.652 others(23): Show c.652+9356_652+9361delCACATA		RSRC1	ENSG00000174891.14	transcript	ENST00000611884.5	protein_coding	7/9					INFO_REALIGN_3_PRIME	chr3	TogoVar
RSRC1_chr3_158105089_158550730	158470361	CATATAT CATATAT	C C	intron_variant intron_variant	MODIFIER	HG01070.hp2 HG01192.hp1 HG01243.hp1 others(6): Show HG01070.hp2 HG01192.hp1 HG01243.hp1 HG01258.hp2 HG01891.hp1 HG02055.hp1 HG02622.hp2 HG03471.hp2 NA19000.hp1	a0001 a0002 a0003 a0001 a0002 a0003	a0001c0001 a0002c0002 a0003c0005 a0001c0001 a0002c0002 a0003c0005	a0001c0001t0002 a0001c0001t0003 a0001c0001t0004 others(3): Show a0001c0001t0002 a0001c0001t0003 a0001c0001t0004 a0001c0001t0007 a0002c0002t0017 a0003c0005t0013	a0001c0001t0002g0002 a0001c0001t0002g0003 a0001c0001t0002g0004 others(6): Show a0001c0001t0002g0002 a0001c0001t0002g0003 a0001c0001t0002g0004 a0001c0001t0002g0005 a0001c0001t0003g0118 a0001c0001t0004g0256 a0001c0001t0007g0194 a0002c0002t0017g0115 a0003c0005t0013g0043	9	276	0.0326	-6	c.652 others(23): Show c.652+9372_652+9377delTATATA		RSRC1	ENSG00000174891.14	transcript	ENST00000611884.5	protein_coding	7/9					INFO_REALIGN_3_PRIME	chr3	TogoVar
RSRC1_chr3_158105089_158550730	158517755	ATTTTTT ATTTTTT	A A	intron_variant intron_variant	MODIFIER	HG00323.hp1 HG01243.hp2 HG01255.hp2 others(18): Show HG00323.hp1 HG01243.hp2 HG01255.hp2 HG01516.hp2 HG01891.hp2 HG02109.hp1 HG02257.hp1 HG02280.hp2 HG02572.hp1 HG02615.hp1 HG02647.hp2 HG02683.hp1 HG02809.hp2 HG02965.hp1 HG03130.hp2 HG03209.hp1 HG03471.hp1 HG03516.hp2 HG06807.hp2 NA18906.hp1 NA19240.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0002 a0001c0001t0006 others(3): Show a0001c0001t0001 a0001c0001t0002 a0001c0001t0006 a0001c0001t0007 a0001c0001t0009 a0001c0001t0022	a0001c0001t0001g0100 a0001c0001t0002g0007 a0001c0001t0002g0020 others(18): Show a0001c0001t0001g0100 a0001c0001t0002g0007 a0001c0001t0002g0020 a0001c0001t0002g0022 a0001c0001t0002g0024 a0001c0001t0002g0027 a0001c0001t0002g0028 a0001c0001t0002g0030 a0001c0001t0002g0234 a0001c0001t0002g0258 a0001c0001t0002g0263 a0001c0001t0002g0271 a0001c0001t0006g0021 a0001c0001t0006g0026 a0001c0001t0007g0179 a0001c0001t0007g0276 a0001c0001t0009g0011 a0001c0001t0009g0034 a0001c0001t0009g0039 a0001c0001t0009g0040 a0001c0001t0022g0008	21	276	0.0761	-6	c.653 others(25): Show c.653-19304_653-19299delTTTTTT		RSRC1	ENSG00000174891.14	transcript	ENST00000611884.5	protein_coding	7/9					INFO_REALIGN_3_PRIME	chr3	TogoVar
RSRC1_chr3_158105089_158550730	158518122	GTGTGTA GTGTGTA	G G	intron_variant intron_variant	MODIFIER	HG02965.hp2 HG03453.hp1 NA18945.hp1 others(2): Show HG02965.hp2 HG03453.hp1 NA18945.hp1 NA19080.hp2 NA19086.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0012 a0001c0001t0014 a0001c0001t0012 a0001c0001t0014	a0001c0001t0012g0013 a0001c0001t0012g0268 a0001c0001t0014g0015 others(2): Show a0001c0001t0012g0013 a0001c0001t0012g0268 a0001c0001t0014g0015 a0001c0001t0014g0016 a0001c0001t0014g0018	5	276	0.0181	-6	c.653 others(25): Show c.653-18968_653-18963delGTGTAT		RSRC1	ENSG00000174891.14	transcript	ENST00000611884.5	protein_coding	7/9					INFO_REALIGN_3_PRIME	chr3	TogoVar
RSRC1_chr3_158105089_158550730	158518124	GTGTATA GTGTATA	G G	intron_variant intron_variant	MODIFIER	HG01884.hp1 HG01993.hp1 HG02886.hp2 others(3): Show HG01884.hp1 HG01993.hp1 HG02886.hp2 HG02922.hp2 HG03209.hp2 HG03579.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0002 a0001c0001t0010 a0001c0001t0012 a0001c0001t0002 a0001c0001t0010 a0001c0001t0012	a0001c0001t0002g0257 a0001c0001t0002g0261 a0001c0001t0002g0265 others(3): Show a0001c0001t0002g0257 a0001c0001t0002g0261 a0001c0001t0002g0265 a0001c0001t0002g0266 a0001c0001t0010g0190 a0001c0001t0012g0031	6	276	0.0217	-6	c.653 others(25): Show c.653-18966_653-18961delGTATAT		RSRC1	ENSG00000174891.14	transcript	ENST00000611884.5	protein_coding	7/9					INFO_REALIGN_3_PRIME	chr3	TogoVar
RSRC2_chr12_122498454_122531936	122502238	CAAAAAA CAAAAAA	C C	downstream_gene_variant downstream_gene_variant	MODIFIER	HG00099.hp1 HG00280.hp1 HG00408.hp2 others(148): Show HG00099.hp1 HG00280.hp1 HG00408.hp2 HG00438.hp2 HG00621.hp1 HG00621.hp2 HG00639.hp1 HG00642.hp1 HG00642.hp2 HG01069.hp2 HG01070.hp2 HG01074.hp1 HG01081.hp1 HG01099.hp2 HG01106.hp1 HG01167.hp2 HG01168.hp1 HG01168.hp2 HG01169.hp1 HG01169.hp2 HG01175.hp2 HG01192.hp2 HG01243.hp2 HG01255.hp1 HG01256.hp2 HG01258.hp1 HG01261.hp1 HG01346.hp1 HG01346.hp2 HG01361.hp1 HG01433.hp2 HG01515.hp1 HG01517.hp2 HG01891.hp1 HG01928.hp1 HG01934.hp1 HG01943.hp1 HG01943.hp2 HG01975.hp1 HG01975.hp2 HG01978.hp2 HG01981.hp2 HG01993.hp2 HG02027.hp1 HG02056.hp2 HG02074.hp1 HG02074.hp2 HG02080.hp2 HG02109.hp2 HG02129.hp1 HG02129.hp2 HG02132.hp2 HG02165.hp2 HG02257.hp1 HG02273.hp1 HG02300.hp1 HG02451.hp1 HG02451.hp2 HG02486.hp2 HG02523.hp1 HG02572.hp1 HG02602.hp1 HG02647.hp2 HG02683.hp1 HG02698.hp2 HG02723.hp1 HG02723.hp2 HG02735.hp2 HG02738.hp2 HG02895.hp2 HG02897.hp1 HG02922.hp1 HG02965.hp1 HG02970.hp1 HG03017.hp1 HG03041.hp2 HG03098.hp2 HG03139.hp1 HG03225.hp2 HG03490.hp2 HG03491.hp2 HG03492.hp1 HG03516.hp1 HG03654.hp1 HG03669.hp2 HG03688.hp1 HG03704.hp2 HG03710.hp2 HG03831.hp2 HG03942.hp1 HG04184.hp2 HG04199.hp1 HG04199.hp2 HG04204.hp1 HG04204.hp2 HG04228.hp1 HG04228.hp2 HG06807.hp1 NA18612.hp2 NA18940.hp1 NA18941.hp2 NA18942.hp2 NA18943.hp1 NA18943.hp2 NA18944.hp2 NA18945.hp2 NA18949.hp1 NA18951.hp2 NA18952.hp1 NA18953.hp1 NA18954.hp1 NA18955.hp1 NA18957.hp1 NA18960.hp1 NA18963.hp2 NA18970.hp1 NA18971.hp2 NA18973.hp2 NA18977.hp1 NA18980.hp1 NA18982.hp1 NA18983.hp1 NA18983.hp2 NA18987.hp2 NA18989.hp2 NA19000.hp1 NA19000.hp2 NA19001.hp2 NA19003.hp1 NA19004.hp2 NA19005.hp2 NA19006.hp2 NA19010.hp1 NA19012.hp1 NA19054.hp2 NA19055.hp1 NA19056.hp1 NA19062.hp2 NA19064.hp2 NA19068.hp1 NA19070.hp2 NA19075.hp2 NA19079.hp2 NA19082.hp2 NA19084.hp1 NA19084.hp2 NA19085.hp2 NA19086.hp1 NA20129.hp1 NA20805.hp2 NA20905.hp1	a0001 a0002 a0001 a0002	a0001c0001 a0002c0002 a0001c0001 a0002c0002	a0001c0001t0002 a0001c0001t0004 a0001c0001t0005 others(15): Show a0001c0001t0002 a0001c0001t0004 a0001c0001t0005 a0001c0001t0006 a0001c0001t0007 a0001c0001t0013 a0001c0001t0014 a0001c0001t0016 a0001c0001t0017 a0001c0001t0018 a0001c0001t0020 a0001c0001t0021 a0001c0001t0024 a0001c0001t0026 a0001c0001t0030 a0001c0001t0031 a0001c0001t0032 a0002c0002t0002	a0001c0001t0002g0001 a0001c0001t0002g0006 a0001c0001t0002g0014 others(87): Show a0001c0001t0002g0001 a0001c0001t0002g0006 a0001c0001t0002g0014 a0001c0001t0002g0022 a0001c0001t0002g0037 a0001c0001t0002g0039 a0001c0001t0002g0054 a0001c0001t0002g0055 a0001c0001t0002g0088 a0001c0001t0002g0090 a0001c0001t0002g0093 a0001c0001t0002g0095 a0001c0001t0002g0099 a0001c0001t0002g0100 a0001c0001t0002g0147 a0001c0001t0002g0158 a0001c0001t0002g0159 a0001c0001t0002g0160 a0001c0001t0002g0164 a0001c0001t0002g0165 a0001c0001t0002g0168 a0001c0001t0002g0171 a0001c0001t0002g0173 a0001c0001t0002g0174 a0001c0001t0002g0175 a0001c0001t0002g0176 a0001c0001t0002g0178 a0001c0001t0002g0179 a0001c0001t0002g0180 a0001c0001t0002g0181 a0001c0001t0002g0183 a0001c0001t0002g0184 a0001c0001t0002g0188 a0001c0001t0002g0190 a0001c0001t0002g0192 a0001c0001t0002g0194 a0001c0001t0004g0010 a0001c0001t0004g0047 a0001c0001t0004g0051 a0001c0001t0004g0053 a0001c0001t0004g0063 a0001c0001t0004g0161 a0001c0001t0004g0163 a0001c0001t0004g0166 a0001c0001t0004g0169 a0001c0001t0004g0170 a0001c0001t0004g0177 a0001c0001t0004g0227 a0001c0001t0004g0228 a0001c0001t0004g0229 a0001c0001t0005g0005 a0001c0001t0005g0048 a0001c0001t0005g0072 a0001c0001t0005g0091 a0001c0001t0005g0155 a0001c0001t0005g0157 a0001c0001t0005g0187 a0001c0001t0005g0193 a0001c0001t0005g0226 a0001c0001t0006g0017 a0001c0001t0006g0035 a0001c0001t0006g0074 a0001c0001t0006g0075 a0001c0001t0006g0076 a0001c0001t0006g0078 a0001c0001t0007g0024 a0001c0001t0007g0191 a0001c0001t0013g0036 a0001c0001t0013g0083 a0001c0001t0013g0084 a0001c0001t0013g0085 a0001c0001t0014g0018 a0001c0001t0014g0094 a0001c0001t0016g0023 a0001c0001t0016g0162 a0001c0001t0017g0050 a0001c0001t0017g0052 a0001c0001t0018g0056 a0001c0001t0018g0070 a0001c0001t0020g0038 a0001c0001t0020g0089 a0001c0001t0021g0057 a0001c0001t0021g0232 a0001c0001t0024g0082 a0001c0001t0024g0086 a0001c0001t0026g0087 a0001c0001t0030g0077 a0001c0001t0031g0092 a0001c0001t0032g0172 a0002c0002t0002g0154	151	382	0.3953	-6	c.32 others(17): Show c.3283_*3288delTTTTTT		RSRC2	ENSG00000111011.18	transcript	ENST00000331738.12	protein_coding					1215		chr12	TogoVar
RSRC2_chr12_122498454_122531936	122519388	GTTAAGT GTTAAGT	G G	intron_variant intron_variant	MODIFIER	HG00099.hp1 HG00280.hp1 HG00408.hp1 others(136): Show HG00099.hp1 HG00280.hp1 HG00408.hp1 HG00408.hp2 HG00438.hp2 HG00621.hp1 HG00621.hp2 HG00639.hp1 HG00642.hp1 HG00642.hp2 HG01069.hp2 HG01070.hp2 HG01074.hp1 HG01081.hp1 HG01099.hp2 HG01106.hp1 HG01167.hp2 HG01168.hp1 HG01168.hp2 HG01169.hp1 HG01169.hp2 HG01175.hp2 HG01192.hp2 HG01243.hp2 HG01255.hp1 HG01256.hp2 HG01258.hp1 HG01261.hp1 HG01346.hp1 HG01346.hp2 HG01361.hp1 HG01361.hp2 HG01433.hp2 HG01515.hp1 HG01517.hp2 HG01928.hp1 HG01934.hp1 HG01943.hp1 HG01943.hp2 HG01975.hp1 HG01975.hp2 HG01978.hp2 HG01981.hp2 HG01993.hp2 HG02027.hp1 HG02056.hp2 HG02071.hp1 HG02074.hp1 HG02074.hp2 HG02080.hp2 HG02129.hp1 HG02129.hp2 HG02132.hp2 HG02165.hp2 HG02273.hp1 HG02300.hp1 HG02451.hp1 HG02486.hp2 HG02523.hp1 HG02602.hp1 HG02683.hp1 HG02698.hp2 HG02735.hp2 HG02738.hp2 HG03017.hp1 HG03098.hp2 HG03490.hp2 HG03654.hp1 HG03669.hp2 HG03688.hp1 HG03704.hp2 HG03710.hp2 HG03831.hp2 HG03942.hp1 HG04184.hp2 HG04199.hp1 HG04199.hp2 HG04204.hp1 HG04204.hp2 HG04228.hp1 HG04228.hp2 NA18612.hp2 NA18940.hp1 NA18941.hp2 NA18942.hp2 NA18943.hp1 NA18943.hp2 NA18944.hp2 NA18945.hp2 NA18949.hp1 NA18951.hp2 NA18952.hp1 NA18953.hp1 NA18954.hp1 NA18955.hp1 NA18956.hp2 NA18957.hp1 NA18960.hp1 NA18963.hp2 NA18970.hp1 NA18971.hp2 NA18973.hp2 NA18977.hp1 NA18980.hp1 NA18982.hp1 NA18983.hp1 NA18983.hp2 NA18987.hp2 NA18989.hp2 NA19000.hp1 NA19000.hp2 NA19001.hp2 NA19003.hp1 NA19004.hp2 NA19005.hp2 NA19006.hp2 NA19010.hp1 NA19012.hp1 NA19054.hp2 NA19055.hp1 NA19056.hp1 NA19062.hp2 NA19063.hp1 NA19064.hp2 NA19065.hp1 NA19067.hp1 NA19068.hp1 NA19070.hp2 NA19072.hp2 NA19075.hp2 NA19079.hp2 NA19082.hp2 NA19084.hp1 NA19084.hp2 NA19085.hp2 NA19086.hp1 NA20129.hp1 NA20805.hp2 NA20905.hp1	a0001 a0002 a0001 a0002	a0001c0001 a0002c0002 a0001c0001 a0002c0002	a0001c0001t0002 a0001c0001t0004 a0001c0001t0005 others(10): Show a0001c0001t0002 a0001c0001t0004 a0001c0001t0005 a0001c0001t0013 a0001c0001t0014 a0001c0001t0016 a0001c0001t0017 a0001c0001t0020 a0001c0001t0024 a0001c0001t0026 a0001c0001t0031 a0001c0001t0032 a0002c0002t0002	a0001c0001t0002g0001 a0001c0001t0002g0006 a0001c0001t0002g0014 others(79): Show a0001c0001t0002g0001 a0001c0001t0002g0006 a0001c0001t0002g0014 a0001c0001t0002g0022 a0001c0001t0002g0037 a0001c0001t0002g0039 a0001c0001t0002g0049 a0001c0001t0002g0054 a0001c0001t0002g0055 a0001c0001t0002g0088 a0001c0001t0002g0090 a0001c0001t0002g0093 a0001c0001t0002g0095 a0001c0001t0002g0099 a0001c0001t0002g0100 a0001c0001t0002g0147 a0001c0001t0002g0156 a0001c0001t0002g0158 a0001c0001t0002g0159 a0001c0001t0002g0160 a0001c0001t0002g0164 a0001c0001t0002g0165 a0001c0001t0002g0168 a0001c0001t0002g0171 a0001c0001t0002g0173 a0001c0001t0002g0174 a0001c0001t0002g0175 a0001c0001t0002g0176 a0001c0001t0002g0178 a0001c0001t0002g0179 a0001c0001t0002g0180 a0001c0001t0002g0181 a0001c0001t0002g0183 a0001c0001t0002g0184 a0001c0001t0002g0188 a0001c0001t0002g0190 a0001c0001t0002g0192 a0001c0001t0002g0194 a0001c0001t0004g0010 a0001c0001t0004g0047 a0001c0001t0004g0051 a0001c0001t0004g0053 a0001c0001t0004g0063 a0001c0001t0004g0153 a0001c0001t0004g0161 a0001c0001t0004g0163 a0001c0001t0004g0166 a0001c0001t0004g0167 a0001c0001t0004g0169 a0001c0001t0004g0170 a0001c0001t0004g0177 a0001c0001t0004g0182 a0001c0001t0004g0227 a0001c0001t0004g0228 a0001c0001t0004g0229 a0001c0001t0005g0005 a0001c0001t0005g0048 a0001c0001t0005g0072 a0001c0001t0005g0091 a0001c0001t0005g0155 a0001c0001t0005g0157 a0001c0001t0005g0187 a0001c0001t0005g0193 a0001c0001t0005g0226 a0001c0001t0013g0036 a0001c0001t0013g0083 a0001c0001t0013g0084 a0001c0001t0013g0085 a0001c0001t0014g0018 a0001c0001t0014g0094 a0001c0001t0016g0023 a0001c0001t0016g0162 a0001c0001t0017g0050 a0001c0001t0017g0052 a0001c0001t0020g0038 a0001c0001t0020g0089 a0001c0001t0024g0082 a0001c0001t0024g0086 a0001c0001t0026g0087 a0001c0001t0031g0092 a0001c0001t0032g0172 a0002c0002t0002g0154	139	382	0.3639	-6	c.208 others(21): Show c.208-365_208-360delACTTAA		RSRC2	ENSG00000111011.18	transcript	ENST00000331738.12	protein_coding	3/9						chr12	TogoVar
RSRP1_chr1_25237249_25252454	25248349	CTTTTTT CTTTTTT	C C	upstream_gene_variant upstream_gene_variant	MODIFIER	HG01109.hp1 HG02055.hp2 HG02145.hp1 others(5): Show HG01109.hp1 HG02055.hp2 HG02145.hp1 HG02572.hp2 HG02976.hp1 HG03130.hp1 HG03225.hp2 NA19030.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0011 a0001c0001t0001g0012 a0001c0001t0001g0020 a0001c0001t0001g0011 a0001c0001t0001g0012 a0001c0001t0001g0020	8	344	0.0233	-6	c.-11 others(17): Show c.-1113_-1108delAAAAAA		RSRP1	ENSG00000117616.18	transcript	ENST00000243189.12	protein_coding					896		chr1	TogoVar
RSU1_chr10_16585611_16822424	16588434	CAAAAAA CAAAAAA	C C	downstream_gene_variant downstream_gene_variant	MODIFIER	HG00408.hp1 HG00544.hp1 HG00642.hp2 others(22): Show HG00408.hp1 HG00544.hp1 HG00642.hp2 HG00741.hp1 HG01884.hp2 HG01891.hp2 HG02080.hp2 HG02109.hp2 HG02523.hp2 HG02615.hp1 HG02717.hp1 HG02723.hp2 HG02809.hp2 HG02970.hp2 HG03041.hp1 HG03098.hp2 HG03471.hp2 HG03540.hp1 HG03540.hp2 HG03579.hp2 HG04184.hp1 NA19060.hp1 NA19081.hp1 NA19088.hp1 NA19240.hp2	a0001 a0001	a0001c0001 a0001c0002 a0001c0003 a0001c0001 a0001c0002 a0001c0003	a0001c0001t0005 a0001c0001t0006 a0001c0001t0007 others(13): Show a0001c0001t0005 a0001c0001t0006 a0001c0001t0007 a0001c0001t0008 a0001c0001t0013 a0001c0001t0052 a0001c0001t0061 a0001c0002t0007 a0001c0002t0008 a0001c0002t0016 a0001c0002t0019 a0001c0002t0027 a0001c0002t0040 a0001c0002t0045 a0001c0002t0056 a0001c0003t0005	a0001c0001t0005g0162 a0001c0001t0006g0114 a0001c0001t0006g0143 others(22): Show a0001c0001t0005g0162 a0001c0001t0006g0114 a0001c0001t0006g0143 a0001c0001t0006g0163 a0001c0001t0007g0148 a0001c0001t0008g0149 a0001c0001t0013g0045 a0001c0001t0013g0047 a0001c0001t0013g0067 a0001c0001t0052g0157 a0001c0001t0061g0186 a0001c0002t0007g0109 a0001c0002t0007g0129 a0001c0002t0007g0140 a0001c0002t0007g0153 a0001c0002t0008g0087 a0001c0002t0008g0142 a0001c0002t0016g0012 a0001c0002t0019g0004 a0001c0002t0019g0005 a0001c0002t0027g0173 a0001c0002t0040g0063 a0001c0002t0045g0023 a0001c0002t0056g0131 a0001c0003t0005g0135	25	190	0.1316	-6	c.49 others(17): Show c.4954_*4959delTTTTTT		RSU1	ENSG00000148484.18	transcript	ENST00000345264.10	protein_coding					2176		chr10	TogoVar
RSU1_chr10_16585611_16822424	16646061	TACACAC TACACAC	T T	intron_variant intron_variant	MODIFIER	HG00099.hp2 HG00544.hp1 HG01243.hp2 others(10): Show HG00099.hp2 HG00544.hp1 HG01243.hp2 HG01257.hp1 HG01258.hp2 HG02145.hp1 HG02630.hp1 HG02717.hp2 HG02818.hp1 HG02818.hp2 HG03098.hp2 HG03492.hp2 NA18906.hp1	a0001 a0001	a0001c0001 a0001c0002 a0001c0001 a0001c0002	a0001c0001t0002 a0001c0001t0004 a0001c0001t0007 others(8): Show a0001c0001t0002 a0001c0001t0004 a0001c0001t0007 a0001c0001t0012 a0001c0001t0017 a0001c0001t0033 a0001c0001t0039 a0001c0002t0001 a0001c0002t0005 a0001c0002t0007 a0001c0002t0054	a0001c0001t0002g0040 a0001c0001t0004g0049 a0001c0001t0004g0069 others(10): Show a0001c0001t0002g0040 a0001c0001t0004g0049 a0001c0001t0004g0069 a0001c0001t0007g0148 a0001c0001t0012g0068 a0001c0001t0017g0006 a0001c0001t0033g0001 a0001c0001t0039g0036 a0001c0002t0001g0108 a0001c0002t0005g0093 a0001c0002t0005g0103 a0001c0002t0007g0140 a0001c0002t0054g0092	13	190	0.0684	-6	c.731 others(25): Show c.731+48956_731+48961delGTGTGT		RSU1	ENSG00000148484.18	transcript	ENST00000345264.10	protein_coding	8/8						chr10	TogoVar
RSU1_chr10_16585611_16822424	16661283	AGTGCGT AGTGCGT	A A	intron_variant intron_variant	MODIFIER	HG00642.hp2 HG01192.hp2 HG01891.hp2 others(14): Show HG00642.hp2 HG01192.hp2 HG01891.hp2 HG02258.hp2 HG02486.hp1 HG02615.hp2 HG02647.hp1 HG02717.hp1 HG02723.hp2 HG02895.hp2 HG02896.hp1 HG02897.hp1 HG02897.hp2 HG03041.hp1 HG03471.hp1 HG03540.hp1 NA20129.hp1	a0001 a0001	a0001c0001 a0001c0002 a0001c0001 a0001c0002	a0001c0001t0002 a0001c0001t0004 a0001c0001t0006 others(10): Show a0001c0001t0002 a0001c0001t0004 a0001c0001t0006 a0001c0001t0012 a0001c0001t0013 a0001c0001t0041 a0001c0001t0042 a0001c0001t0043 a0001c0002t0016 a0001c0002t0019 a0001c0002t0032 a0001c0002t0035 a0001c0002t0045	a0001c0001t0002g0018 a0001c0001t0002g0019 a0001c0001t0004g0074 others(14): Show a0001c0001t0002g0018 a0001c0001t0002g0019 a0001c0001t0004g0074 a0001c0001t0006g0167 a0001c0001t0012g0054 a0001c0001t0012g0057 a0001c0001t0013g0045 a0001c0001t0013g0047 a0001c0001t0013g0067 a0001c0001t0041g0031 a0001c0001t0042g0046 a0001c0001t0043g0020 a0001c0002t0016g0012 a0001c0002t0019g0005 a0001c0002t0032g0013 a0001c0002t0035g0017 a0001c0002t0045g0023	17	190	0.0895	-6	c.731 others(25): Show c.731+33734_731+33739delACGCAC		RSU1	ENSG00000148484.18	transcript	ENST00000345264.10	protein_coding	8/8						chr10	TogoVar
RSU1_chr10_16585611_16822424	16661287	CGTGTGT CGTGTGT	C C	intron_variant intron_variant	MODIFIER	HG01243.hp1 HG02056.hp1 HG02071.hp2 others(9): Show HG01243.hp1 HG02056.hp1 HG02071.hp2 HG02080.hp1 HG02109.hp2 HG02559.hp1 HG02976.hp2 HG03041.hp2 HG03942.hp2 NA19043.hp1 NA19060.hp2 NA19088.hp2	a0001 a0001	a0001c0001 a0001c0002 a0001c0003 a0001c0001 a0001c0002 a0001c0003	a0001c0001t0001 a0001c0001t0002 a0001c0001t0004 others(7): Show a0001c0001t0001 a0001c0001t0002 a0001c0001t0004 a0001c0001t0018 a0001c0001t0023 a0001c0001t0026 a0001c0001t0047 a0001c0001t0052 a0001c0002t0021 a0001c0003t0001	a0001c0001t0001g0086 a0001c0001t0002g0034 a0001c0001t0004g0051 others(9): Show a0001c0001t0001g0086 a0001c0001t0002g0034 a0001c0001t0004g0051 a0001c0001t0018g0015 a0001c0001t0023g0110 a0001c0001t0026g0187 a0001c0001t0047g0042 a0001c0001t0052g0157 a0001c0002t0021g0059 a0001c0003t0001g0127 a0001c0003t0001g0145 a0001c0003t0001g0164	12	190	0.0632	-6	c.731 others(25): Show c.731+33730_731+33735delACACAC		RSU1	ENSG00000148484.18	transcript	ENST00000345264.10	protein_coding	8/8						chr10	TogoVar
RSU1_chr10_16585611_16822424	16691722	CTTTTTT CTTTTTT	C C	intron_variant intron_variant	MODIFIER	HG00642.hp2 HG01109.hp2 HG01243.hp2 others(7): Show HG00642.hp2 HG01109.hp2 HG01243.hp2 HG02451.hp2 HG02630.hp1 HG02818.hp1 HG03041.hp1 HG03225.hp1 NA19240.hp2 NA21309.hp1	a0001 a0001	a0001c0001 a0001c0002 a0001c0001 a0001c0002	a0001c0001t0004 a0001c0001t0017 a0001c0001t0030 others(7): Show a0001c0001t0004 a0001c0001t0017 a0001c0001t0030 a0001c0001t0033 a0001c0001t0059 a0001c0002t0002 a0001c0002t0006 a0001c0002t0016 a0001c0002t0040 a0001c0002t0045	a0001c0001t0004g0049 a0001c0001t0017g0006 a0001c0001t0030g0007 others(7): Show a0001c0001t0004g0049 a0001c0001t0017g0006 a0001c0001t0030g0007 a0001c0001t0033g0001 a0001c0001t0059g0156 a0001c0002t0002g0066 a0001c0002t0006g0132 a0001c0002t0016g0012 a0001c0002t0040g0063 a0001c0002t0045g0023	10	190	0.0526	-6	c.731 others(23): Show c.731+3295_731+3300delAAAAAA		RSU1	ENSG00000148484.18	transcript	ENST00000345264.10	protein_coding	8/8						chr10	TogoVar
RSU1_chr10_16585611_16822424	16799506	AAACAAC AAACAAC	A A	intron_variant intron_variant	MODIFIER	HG02155.hp1 NA18612.hp1 NA18974.hp2 others(2): Show HG02155.hp1 NA18612.hp1 NA18974.hp2 NA19060.hp2 NA19084.hp1	a0001 a0001	a0001c0001 a0001c0003 a0001c0001 a0001c0003	a0001c0001t0001 a0001c0001t0003 a0001c0001t0008 others(1): Show a0001c0001t0001 a0001c0001t0003 a0001c0001t0008 a0001c0003t0001	a0001c0001t0001g0120 a0001c0001t0001g0125 a0001c0001t0003g0183 others(2): Show a0001c0001t0001g0120 a0001c0001t0001g0125 a0001c0001t0003g0183 a0001c0001t0008g0119 a0001c0003t0001g0127	5	190	0.0263	-6	c.110 others(25): Show c.110-17428_110-17423delGTTGTT		RSU1	ENSG00000148484.18	transcript	ENST00000345264.10	protein_coding	2/8						chr10	TogoVar
RTBDN_chr19_12820482_12839579	12830838	AGTGTGT AGTGTGT	A A	intron_variant intron_variant	MODIFIER	HG00323.hp1 HG00735.hp1 HG01099.hp2 others(6): Show HG00323.hp1 HG00735.hp1 HG01099.hp2 HG01243.hp1 HG01257.hp2 HG01258.hp2 HG01358.hp2 HG03209.hp2 NA20805.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0014 a0001c0001t0001g0071 a0001c0001t0001g0092 others(1): Show a0001c0001t0001g0014 a0001c0001t0001g0071 a0001c0001t0001g0092 a0001c0001t0001g0140	9	430	0.0209	-6	c.-18 others(21): Show c.-18-847_-18-842delACACAC		RTBDN	ENSG00000132026.15	transcript	ENST00000674343.2	protein_coding	1/5						chr19	TogoVar
RTBDN_chr19_12820482_12839579	12831016	TTGTGTG TTGTGTG	T T	intron_variant intron_variant	MODIFIER	HG00438.hp1 HG00639.hp1 HG00741.hp1 others(22): Show HG00438.hp1 HG00639.hp1 HG00741.hp1 HG01168.hp1 HG01169.hp1 HG02055.hp2 HG02258.hp1 HG02280.hp2 HG02602.hp1 HG02809.hp1 HG02818.hp1 HG02897.hp1 HG02970.hp1 HG03579.hp2 NA18522.hp2 NA18906.hp2 NA18941.hp2 NA18960.hp2 NA18973.hp2 NA18975.hp2 NA18983.hp1 NA19065.hp1 NA19079.hp1 NA19090.hp2 NA19091.hp1	a0001 a0002 a0001 a0002	a0001c0001 a0001c0003 a0002c0002 a0001c0001 a0001c0003 a0002c0002	a0001c0001t0001 a0001c0003t0001 a0002c0002t0001 a0001c0001t0001 a0001c0003t0001 a0002c0002t0001	a0001c0001t0001g0008 a0001c0001t0001g0030 a0001c0001t0001g0065 others(7): Show a0001c0001t0001g0008 a0001c0001t0001g0030 a0001c0001t0001g0065 a0001c0001t0001g0066 a0001c0001t0001g0112 a0001c0001t0001g0130 a0001c0001t0001g0131 a0001c0003t0001g0034 a0002c0002t0001g0033 a0002c0002t0001g0098	25	430	0.0581	-6	c.-18 others(23): Show c.-18-1025_-18-1020delCACACA		RTBDN	ENSG00000132026.15	transcript	ENST00000674343.2	protein_coding	1/5						chr19	TogoVar
RTF1_chr15_41412095_41488563	41414918	GATTATT GATTATT	G G	upstream_gene_variant upstream_gene_variant	MODIFIER	HG01081.hp2 HG01106.hp2 HG01257.hp1 others(12): Show HG01081.hp2 HG01106.hp2 HG01257.hp1 HG01258.hp2 HG01515.hp2 HG01517.hp1 HG01891.hp1 HG02976.hp1 HG03041.hp1 HG03139.hp2 HG04199.hp1 HG04204.hp2 NA19043.hp2 NA20905.hp2 NA21309.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0005 a0001c0001t0005	a0001c0001t0005g0210 a0001c0001t0005g0211 a0001c0001t0005g0212 others(12): Show a0001c0001t0005g0210 a0001c0001t0005g0211 a0001c0001t0005g0212 a0001c0001t0005g0213 a0001c0001t0005g0214 a0001c0001t0005g0215 a0001c0001t0005g0216 a0001c0001t0005g0217 a0001c0001t0005g0218 a0001c0001t0005g0219 a0001c0001t0005g0220 a0001c0001t0005g0221 a0001c0001t0005g0222 a0001c0001t0005g0223 a0001c0001t0005g0224	15	226	0.0664	-6	c.-21 others(17): Show c.-2197_-2192delATTATT		RTF1	ENSG00000137815.15	transcript	ENST00000389629.9	protein_coding					2176		chr15	TogoVar
RTF1_chr15_41412095_41488563	41426779	ATATGTG ATATGTG	A A	intron_variant intron_variant	MODIFIER	HG00323.hp2 HG01515.hp1 HG02055.hp2 others(5): Show HG00323.hp2 HG01515.hp1 HG02055.hp2 HG02486.hp1 HG02809.hp2 HG03130.hp1 HG03486.hp2 HG03834.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0003 a0001c0001t0012 a0001c0001t0026 a0001c0001t0003 a0001c0001t0012 a0001c0001t0026	a0001c0001t0003g0018 a0001c0001t0003g0164 a0001c0001t0003g0169 others(5): Show a0001c0001t0003g0018 a0001c0001t0003g0164 a0001c0001t0003g0169 a0001c0001t0003g0170 a0001c0001t0012g0021 a0001c0001t0012g0168 a0001c0001t0012g0171 a0001c0001t0026g0165	8	226	0.0354	-6	c.198 others(23): Show c.198+9468_198+9473delATGTGT		RTF1	ENSG00000137815.15	transcript	ENST00000389629.9	protein_coding	1/17					INFO_REALIGN_3_PRIME	chr15	TogoVar
RTF1_chr15_41412095_41488563	41458750	AAAAAAT AAAAAAT	A A	intron_variant intron_variant	MODIFIER	HG01496.hp1 HG02451.hp2 HG03195.hp2 HG01496.hp1 HG02451.hp2 HG03195.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0011 a0001c0001t0011	a0001c0001t0011g0200 a0001c0001t0011g0201 a0001c0001t0011g0202 a0001c0001t0011g0200 a0001c0001t0011g0201 a0001c0001t0011g0202	3	226	0.0133	-6	c.662 others(21): Show c.662+890_662+895delAATAAA		RTF1	ENSG00000137815.15	transcript	ENST00000389629.9	protein_coding	4/17					INFO_REALIGN_3_PRIME	chr15	TogoVar
RTF2_chr20_56463627_56524449	56515575	CAGAGAG CAGAGAG	C C	intron_variant intron_variant	MODIFIER	HG01109.hp2 HG01123.hp1 HG01243.hp2 others(8): Show HG01109.hp2 HG01123.hp1 HG01243.hp2 HG01884.hp1 HG01934.hp2 HG01943.hp1 HG02148.hp2 HG02717.hp2 HG03098.hp2 HG03516.hp2 NA21309.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0002 a0001c0001t0002	a0001c0001t0002g0014 a0001c0001t0002g0016 a0001c0001t0002g0036 others(3): Show a0001c0001t0002g0014 a0001c0001t0002g0016 a0001c0001t0002g0036 a0001c0001t0002g0176 a0001c0001t0002g0197 a0001c0001t0002g0221	11	388	0.0284	-6	c.592 others(23): Show c.592-1340_592-1335delGAGAGA		RTF2	ENSG00000022277.13	transcript	ENST00000357348.10	protein_coding	6/8					INFO_REALIGN_3_PRIME	chr20	TogoVar
RTF2_chr20_56463627_56524449	56515595	GAGAGAC GAGAGAC	G G	intron_variant intron_variant	MODIFIER	HG00597.hp1 HG02027.hp2 HG06807.hp2 others(1): Show HG00597.hp1 HG02027.hp2 HG06807.hp2 NA19081.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0267 a0001c0001t0001g0280 a0001c0001t0001g0289 others(1): Show a0001c0001t0001g0267 a0001c0001t0001g0280 a0001c0001t0001g0289 a0001c0001t0001g0293	4	388	0.0103	-6	c.592 others(23): Show c.592-1338_592-1333delGAGACA		RTF2	ENSG00000022277.13	transcript	ENST00000357348.10	protein_coding	6/8					INFO_REALIGN_3_PRIME	chr20	TogoVar
RTF2_chr20_56463627_56524449	56515597	GAGACAC GAGACAC	G G	intron_variant intron_variant	MODIFIER	HG01928.hp2 HG02965.hp2 HG03098.hp1 others(1): Show HG01928.hp2 HG02965.hp2 HG03098.hp1 NA20805.hp2	a0001 a0002 a0001 a0002	a0001c0001 a0002c0002 a0001c0001 a0002c0002	a0001c0001t0002 a0002c0002t0001 a0001c0001t0002 a0002c0002t0001	a0001c0001t0002g0260 a0002c0002t0001g0238 a0002c0002t0001g0248 others(1): Show a0001c0001t0002g0260 a0002c0002t0001g0238 a0002c0002t0001g0248 a0002c0002t0001g0256	4	388	0.0103	-6	c.592 others(23): Show c.592-1336_592-1331delGACACA		RTF2	ENSG00000022277.13	transcript	ENST00000357348.10	protein_coding	6/8					INFO_REALIGN_3_PRIME	chr20	TogoVar
RTKN2_chr10_62188086_62273844	62207801	GTATTGA GTATTGA	G G	intron_variant intron_variant	MODIFIER	HG00735.hp1 HG00738.hp2 HG01081.hp2 others(3): Show HG00735.hp1 HG00738.hp2 HG01081.hp2 HG01106.hp1 HG01884.hp2 HG04115.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0005 a0001c0001t0012 others(1): Show a0001c0001t0001 a0001c0001t0005 a0001c0001t0012 a0001c0001t0025	a0001c0001t0001g0070 a0001c0001t0005g0072 a0001c0001t0005g0080 others(3): Show a0001c0001t0001g0070 a0001c0001t0005g0072 a0001c0001t0005g0080 a0001c0001t0012g0073 a0001c0001t0025g0049 a0001c0001t0025g0071	6	262	0.0229	-6	c.102 others(25): Show c.1021-2785_1021-2780delTCAATA		RTKN2	ENSG00000182010.11	transcript	ENST00000373789.8	protein_coding	9/11						chr10	TogoVar
RTKN2_chr10_62188086_62273844	62209386	GGTGTGT GGTGTGT	G G	intron_variant intron_variant	MODIFIER	HG00099.hp1 HG00140.hp1 HG00140.hp2 others(102): Show HG00099.hp1 HG00140.hp1 HG00140.hp2 HG00544.hp2 HG00558.hp1 HG00558.hp2 HG00597.hp2 HG00673.hp1 HG00673.hp2 HG00735.hp1 HG00738.hp2 HG00741.hp2 HG01069.hp2 HG01071.hp2 HG01081.hp2 HG01106.hp1 HG01109.hp2 HG01123.hp1 HG01175.hp1 HG01192.hp1 HG01261.hp2 HG01358.hp1 HG01361.hp1 HG01361.hp2 HG01433.hp2 HG01496.hp2 HG01516.hp2 HG01884.hp2 HG01943.hp2 HG02040.hp2 HG02071.hp2 HG02109.hp1 HG02129.hp1 HG02135.hp1 HG02135.hp2 HG02165.hp1 HG02280.hp2 HG02293.hp1 HG02486.hp2 HG02523.hp1 HG02523.hp2 HG02559.hp2 HG02615.hp2 HG02647.hp1 HG02717.hp1 HG02895.hp1 HG02896.hp2 HG02897.hp2 HG02922.hp2 HG03239.hp2 HG03471.hp1 HG03490.hp1 HG03491.hp2 HG03516.hp2 HG03579.hp2 HG03688.hp2 HG03704.hp2 HG03710.hp2 HG03831.hp2 HG03834.hp1 HG03927.hp1 HG04115.hp2 HG04184.hp1 HG04199.hp1 HG04204.hp1 NA18906.hp1 NA18940.hp1 NA18942.hp2 NA18948.hp2 NA18950.hp1 NA18951.hp1 NA18951.hp2 NA18953.hp2 NA18955.hp2 NA18957.hp1 NA18963.hp1 NA18964.hp1 NA18964.hp2 NA18973.hp2 NA18974.hp2 NA18999.hp2 NA19003.hp1 NA19009.hp1 NA19011.hp1 NA19012.hp2 NA19057.hp1 NA19058.hp1 NA19060.hp1 NA19060.hp2 NA19062.hp2 NA19072.hp2 NA19074.hp2 NA19079.hp1 NA19079.hp2 NA19082.hp1 NA19082.hp2 NA19084.hp1 NA19086.hp2 NA19089.hp2 NA19091.hp1 NA19091.hp2 NA19240.hp2 NA20129.hp2 NA20752.hp2 NA20905.hp1	a0001 a0002 a0008 others(1): Show a0001 a0002 a0008 a0010	a0001c0001 a0001c0008 a0001c0014 others(3): Show a0001c0001 a0001c0008 a0001c0014 a0002c0003 a0008c0012 a0010c0013	a0001c0001t0001 a0001c0001t0003 a0001c0001t0005 others(29): Show a0001c0001t0001 a0001c0001t0003 a0001c0001t0005 a0001c0001t0006 a0001c0001t0011 a0001c0001t0012 a0001c0001t0013 a0001c0001t0014 a0001c0001t0022 a0001c0001t0023 a0001c0001t0024 a0001c0001t0025 a0001c0001t0026 a0001c0001t0027 a0001c0001t0042 a0001c0001t0043 a0001c0001t0044 a0001c0001t0046 a0001c0001t0047 a0001c0001t0048 a0001c0001t0049 a0001c0001t0050 a0001c0001t0051 a0001c0001t0052 a0001c0001t0053 a0001c0008t0017 a0001c0008t0036 a0001c0014t0045 a0002c0003t0020 a0002c0003t0021 a0008c0012t0003 a0010c0013t0003	a0001c0001t0001g0002 a0001c0001t0001g0008 a0001c0001t0001g0009 others(90): Show a0001c0001t0001g0002 a0001c0001t0001g0008 a0001c0001t0001g0009 a0001c0001t0001g0022 a0001c0001t0001g0032 a0001c0001t0001g0033 a0001c0001t0001g0034 a0001c0001t0001g0035 a0001c0001t0001g0036 a0001c0001t0001g0040 a0001c0001t0001g0043 a0001c0001t0001g0052 a0001c0001t0001g0056 a0001c0001t0001g0057 a0001c0001t0001g0059 a0001c0001t0001g0060 a0001c0001t0001g0063 a0001c0001t0001g0066 a0001c0001t0001g0069 a0001c0001t0001g0070 a0001c0001t0001g0075 a0001c0001t0001g0078 a0001c0001t0001g0097 a0001c0001t0001g0104 a0001c0001t0001g0106 a0001c0001t0003g0001 a0001c0001t0003g0006 a0001c0001t0003g0023 a0001c0001t0003g0025 a0001c0001t0003g0027 a0001c0001t0003g0031 a0001c0001t0003g0037 a0001c0001t0003g0054 a0001c0001t0003g0058 a0001c0001t0003g0061 a0001c0001t0003g0067 a0001c0001t0003g0100 a0001c0001t0005g0055 a0001c0001t0005g0072 a0001c0001t0005g0076 a0001c0001t0005g0080 a0001c0001t0005g0083 a0001c0001t0005g0089 a0001c0001t0005g0098 a0001c0001t0005g0099 a0001c0001t0005g0101 a0001c0001t0005g0102 a0001c0001t0005g0103 a0001c0001t0006g0222 a0001c0001t0011g0004 a0001c0001t0011g0046 a0001c0001t0012g0007 a0001c0001t0012g0051 a0001c0001t0012g0073 a0001c0001t0013g0064 a0001c0001t0013g0088 a0001c0001t0013g0092 a0001c0001t0013g0096 a0001c0001t0014g0048 a0001c0001t0014g0065 a0001c0001t0014g0107 a0001c0001t0022g0039 a0001c0001t0022g0093 a0001c0001t0023g0024 a0001c0001t0023g0068 a0001c0001t0024g0050 a0001c0001t0024g0079 a0001c0001t0025g0049 a0001c0001t0025g0071 a0001c0001t0026g0042 a0001c0001t0026g0087 a0001c0001t0027g0094 a0001c0001t0027g0095 a0001c0001t0042g0081 a0001c0001t0043g0082 a0001c0001t0044g0045 a0001c0001t0046g0085 a0001c0001t0047g0062 a0001c0001t0048g0028 a0001c0001t0049g0053 a0001c0001t0050g0074 a0001c0001t0051g0026 a0001c0001t0052g0044 a0001c0001t0053g0086 a0001c0008t0017g0189 a0001c0008t0036g0203 a0001c0014t0045g0105 a0002c0003t0020g0047 a0002c0003t0020g0077 a0002c0003t0021g0029 a0002c0003t0021g0030 a0008c0012t0003g0084 a0010c0013t0003g0091	105	262	0.4008	-6	c.102 others(25): Show c.1021-4370_1021-4365delACACAC		RTKN2	ENSG00000182010.11	transcript	ENST00000373789.8	protein_coding	9/11						chr10	TogoVar
RTKN2_chr10_62188086_62273844	62217153	TAGCTTC TAGCTTC	T T	conservative_inframe_deletion conservative_inframe_deletion	MODERATE	HG01069.hp1 HG01071.hp1 HG01081.hp1 others(47): Show HG01069.hp1 HG01071.hp1 HG01081.hp1 HG01109.hp1 HG01243.hp1 HG01261.hp1 HG01496.hp1 HG01884.hp1 HG01891.hp2 HG02055.hp1 HG02109.hp2 HG02145.hp1 HG02165.hp2 HG02258.hp1 HG02280.hp1 HG02486.hp1 HG02622.hp1 HG02630.hp2 HG02809.hp1 HG02809.hp2 HG02896.hp1 HG02897.hp1 HG02965.hp1 HG02965.hp2 HG02970.hp2 HG02976.hp1 HG03041.hp2 HG03139.hp2 HG03209.hp2 HG03225.hp1 HG03225.hp2 HG03516.hp1 HG03540.hp1 HG03579.hp1 HG03831.hp1 HG03927.hp2 HG06807.hp1 HG06807.hp2 NA18522.hp2 NA18906.hp2 NA18955.hp1 NA19043.hp1 NA19072.hp1 NA19240.hp1 NA20129.hp1 NA20300.hp1 NA20752.hp1 NA20805.hp2 NA20905.hp2 homoSapiens_chm13v2.hp1	a0003 a0006 a0009 a0003 a0006 a0009	a0003c0002 a0006c0007 a0009c0010 a0003c0002 a0006c0007 a0009c0010	a0003c0002t0004 a0003c0002t0008 a0003c0002t0009 others(19): Show a0003c0002t0004 a0003c0002t0008 a0003c0002t0009 a0003c0002t0015 a0003c0002t0028 a0003c0002t0029 a0003c0002t0056 a0003c0002t0058 a0003c0002t0062 a0003c0002t0070 a0003c0002t0071 a0003c0002t0072 a0003c0002t0073 a0003c0002t0076 a0003c0002t0077 a0003c0002t0080 a0003c0002t0094 a0006c0007t0006 a0006c0007t0007 a0006c0007t0036 a0006c0007t0082 a0009c0010t0009	a0003c0002t0004g0005 a0003c0002t0004g0014 a0003c0002t0004g0110 others(40): Show a0003c0002t0004g0005 a0003c0002t0004g0014 a0003c0002t0004g0110 a0003c0002t0004g0119 a0003c0002t0004g0120 a0003c0002t0004g0121 a0003c0002t0004g0124 a0003c0002t0004g0132 a0003c0002t0008g0010 a0003c0002t0008g0011 a0003c0002t0008g0012 a0003c0002t0008g0128 a0003c0002t0009g0114 a0003c0002t0009g0138 a0003c0002t0009g0139 a0003c0002t0009g0140 a0003c0002t0009g0141 a0003c0002t0009g0142 a0003c0002t0009g0146 a0003c0002t0015g0013 a0003c0002t0015g0122 a0003c0002t0028g0133 a0003c0002t0029g0118 a0003c0002t0029g0134 a0003c0002t0056g0127 a0003c0002t0058g0135 a0003c0002t0062g0126 a0003c0002t0070g0117 a0003c0002t0071g0112 a0003c0002t0072g0130 a0003c0002t0073g0129 a0003c0002t0076g0123 a0003c0002t0077g0125 a0003c0002t0080g0143 a0003c0002t0094g0115 a0006c0007t0006g0136 a0006c0007t0006g0137 a0006c0007t0006g0145 a0006c0007t0006g0148 a0006c0007t0007g0116 a0006c0007t0036g0144 a0006c0007t0082g0131 a0009c0010t0009g0147	50	262	0.1908	-6	c.979 others(13): Show c.979_984delGAAGCT	p.Glu others(13): Show p.Glu327_Ala328del	RTKN2	ENSG00000182010.11	transcript	ENST00000373789.8	protein_coding	9/12	1218/6886	979/1830	327/609			chr10	TogoVar
RTKN_chr2_74420835_74446937	74443617	GATAGAT GATAGAT	G G	upstream_gene_variant upstream_gene_variant	MODIFIER	HG00280.hp1 HG00597.hp2 HG00609.hp2 others(57): Show HG00280.hp1 HG00597.hp2 HG00609.hp2 HG00639.hp1 HG00738.hp2 HG00741.hp2 HG01099.hp1 HG01243.hp1 HG01516.hp2 HG01517.hp1 HG01891.hp1 HG01975.hp2 HG02040.hp1 HG02083.hp1 HG02083.hp2 HG02145.hp1 HG02145.hp2 HG02148.hp1 HG02258.hp2 HG02559.hp2 HG02647.hp1 HG02683.hp2 HG02738.hp1 HG02896.hp2 HG02922.hp1 HG02976.hp2 HG03704.hp2 HG03831.hp2 HG03927.hp1 HG04115.hp1 HG04115.hp2 HG04228.hp1 HG06807.hp1 NA18612.hp2 NA18747.hp1 NA18747.hp2 NA18939.hp2 NA18941.hp2 NA18946.hp2 NA18952.hp2 NA18959.hp1 NA18962.hp1 NA18962.hp2 NA18975.hp2 NA18978.hp2 NA18988.hp1 NA19005.hp1 NA19005.hp2 NA19007.hp2 NA19012.hp1 NA19055.hp1 NA19062.hp2 NA19063.hp2 NA19064.hp2 NA19068.hp2 NA19081.hp1 NA19081.hp2 NA19087.hp2 NA20905.hp1 homoSapiens_chm13v2.hp1	a0001 a0003 a0001 a0003	a0001c0001 a0003c0010 a0001c0001 a0003c0010	a0001c0001t0001 a0001c0001t0002 a0001c0001t0004 others(1): Show a0001c0001t0001 a0001c0001t0002 a0001c0001t0004 a0003c0010t0001	a0001c0001t0001g0001 a0001c0001t0001g0002 a0001c0001t0001g0003 others(14): Show a0001c0001t0001g0001 a0001c0001t0001g0002 a0001c0001t0001g0003 a0001c0001t0001g0004 a0001c0001t0001g0005 a0001c0001t0001g0013 a0001c0001t0001g0024 a0001c0001t0001g0041 a0001c0001t0001g0055 a0001c0001t0001g0073 a0001c0001t0001g0088 a0001c0001t0002g0022 a0001c0001t0002g0029 a0001c0001t0002g0093 a0001c0001t0002g0094 a0001c0001t0004g0034 a0003c0010t0001g0052	60	382	0.1571	-6	c.-18 others(17): Show c.-1807_-1802delATCTAT		RTKN	ENSG00000114993.17	transcript	ENST00000272430.10	protein_coding					1681		chr2	TogoVar
RTKN_chr2_74420835_74446937	74443681	GATAGAT GATAGAT	G G	upstream_gene_variant upstream_gene_variant	MODIFIER	HG02080.hp2 HG02148.hp1 HG02523.hp1 others(10): Show HG02080.hp2 HG02148.hp1 HG02523.hp1 NA18612.hp1 NA18946.hp2 NA18956.hp1 NA18959.hp1 NA18975.hp2 NA19007.hp2 NA19012.hp1 NA19063.hp2 NA19087.hp2 NA19088.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0005 a0001c0001t0001g0070 a0001c0001t0001g0096 a0001c0001t0001g0005 a0001c0001t0001g0070 a0001c0001t0001g0096	13	382	0.0340	-6	c.-18 others(17): Show c.-1871_-1866delATCTAT		RTKN	ENSG00000114993.17	transcript	ENST00000272430.10	protein_coding					1745		chr2	TogoVar
RTL1_chr14_100874753_100908722	100888457	CCTTTAT CCTTTAT	C C	intron_variant intron_variant	MODIFIER	HG00323.hp2 HG00408.hp1 HG00597.hp2 others(23): Show HG00323.hp2 HG00408.hp1 HG00597.hp2 HG00735.hp2 HG01074.hp1 HG01167.hp1 HG01169.hp1 HG01243.hp1 HG01516.hp2 HG01517.hp1 HG02074.hp2 HG02145.hp2 HG02523.hp2 HG02698.hp2 HG03490.hp2 HG04204.hp1 HG04228.hp1 NA18747.hp2 NA18956.hp2 NA18969.hp2 NA18983.hp2 NA19065.hp2 NA19070.hp1 NA19070.hp2 NA20905.hp1 homoSapiens_chm13v2.hp1	a0001 a0002 a0003 a0001 a0002 a0003	a0001c0001 a0001c0004 a0002c0002 others(1): Show a0001c0001 a0001c0004 a0002c0002 a0003c0023	a0001c0001t0001 a0001c0004t0001 a0002c0002t0001 others(5): Show a0001c0001t0001 a0001c0004t0001 a0002c0002t0001 a0002c0002t0003 a0002c0002t0006 a0002c0002t0008 a0002c0002t0024 a0003c0023t0001	a0001c0001t0001g0076 a0001c0001t0001g0088 a0001c0004t0001g0081 others(22): Show a0001c0001t0001g0076 a0001c0001t0001g0088 a0001c0004t0001g0081 a0002c0002t0001g0073 a0002c0002t0001g0200 a0002c0002t0001g0333 a0002c0002t0001g0379 a0002c0002t0003g0083 a0002c0002t0003g0084 a0002c0002t0003g0085 a0002c0002t0003g0086 a0002c0002t0003g0106 a0002c0002t0003g0185 a0002c0002t0003g0215 a0002c0002t0003g0252 a0002c0002t0003g0341 a0002c0002t0003g0377 a0002c0002t0003g0388 a0002c0002t0006g0031 a0002c0002t0008g0003 a0002c0002t0008g0038 a0002c0002t0008g0045 a0002c0002t0008g0060 a0002c0002t0024g0400 a0003c0023t0001g0177	26	430	0.0605	-6	c.-86 others(23): Show c.-86-3589_-86-3584delATAAAG		RTL1	ENSG00000254656.3	transcript	ENST00000649591.1	protein_coding	3/3						chr14	TogoVar
RTL1_chr14_100874753_100908722	100902608	TAGCAGC TAGCAGC	T T	intron_variant intron_variant	MODIFIER	HG00140.hp2 HG00280.hp2 HG00735.hp2 HG00140.hp2 HG00280.hp2 HG00735.hp2	a0001 a0002 a0003 a0001 a0002 a0003	a0001c0001 a0002c0002 a0003c0005 a0001c0001 a0002c0002 a0003c0005	a0001c0001t0001 a0002c0002t0006 a0003c0005t0003 a0001c0001t0001 a0002c0002t0006 a0003c0005t0003	a0001c0001t0001g0098 a0002c0002t0006g0031 a0003c0005t0003g0099 a0001c0001t0001g0098 a0002c0002t0006g0031 a0003c0005t0003g0099	3	430	0.0070	-6	c.-14 others(23): Show c.-149+677_-149+682delGCTGCT		RTL1	ENSG00000254656.3	transcript	ENST00000649591.1	protein_coding	2/3						chr14	TogoVar
RTL3_chrX_78651068_78664328	78661158	TTAATAA TTAATAA	T T	upstream_gene_variant upstream_gene_variant	MODIFIER	HG02040.hp1 HG03195.hp2 NA18950.hp1 others(2): Show HG02040.hp1 HG03195.hp2 NA18950.hp1 NA18974.hp1 NA19082.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0001 a0001c0001t0001g0001	5	322	0.0155	-6	c.-21 others(17): Show c.-2132_-2127delTTATTA		RTL3	ENSG00000179300.4	transcript	ENST00000321110.2	protein_coding					1831		chrX	TogoVar
RTL4_chrX_112078016_112462514	112080391	TACATAC TACATAC	T T	upstream_gene_variant upstream_gene_variant	MODIFIER	HG02630.hp2 HG02630.hp2	a0001 a0001	a0001c0002 a0001c0002	a0001c0002t0002 a0001c0002t0002	a0001c0002t0002g0032 a0001c0002t0002g0032	1	134	0.0075	-6	c.-32 others(17): Show c.-3289_-3284delACATAC		RTL4	ENSG00000187823.4	transcript	ENST00000695839.1	protein_coding					2624		chrX	TogoVar
RTL4_chrX_112078016_112462514	112080395	TACACAC TACACAC	T T	upstream_gene_variant upstream_gene_variant	MODIFIER	HG01106.hp1 HG01168.hp1 HG02257.hp2 others(3): Show HG01106.hp1 HG01168.hp1 HG02257.hp2 HG02698.hp1 HG02895.hp1 HG03195.hp1	a0001 a0002 a0003 a0001 a0002 a0003	a0001c0002 a0001c0003 a0002c0001 others(1): Show a0001c0002 a0001c0003 a0002c0001 a0003c0004	a0001c0002t0002 a0001c0002t0004 a0001c0003t0003 others(2): Show a0001c0002t0002 a0001c0002t0004 a0001c0003t0003 a0002c0001t0001 a0003c0004t0001	a0001c0002t0002g0029 a0001c0002t0004g0030 a0001c0003t0003g0028 others(3): Show a0001c0002t0002g0029 a0001c0002t0004g0030 a0001c0003t0003g0028 a0002c0001t0001g0014 a0002c0001t0001g0073 a0003c0004t0001g0034	6	134	0.0448	-6	c.-32 others(17): Show c.-3285_-3280delACACAC		RTL4	ENSG00000187823.4	transcript	ENST00000695839.1	protein_coding					2620		chrX	TogoVar
RTL4_chrX_112078016_112462514	112082829	GAGAGAA GAGAGAA	G G	upstream_gene_variant upstream_gene_variant	MODIFIER	NA19043.hp1 NA19043.hp1	a0001 a0001	a0001c0003 a0001c0003	a0001c0003t0005 a0001c0003t0005	a0001c0003t0005g0117 a0001c0003t0005g0117	1	134	0.0075	-6	c.-85 others(15): Show c.-851_-846delAGAGAA		RTL4	ENSG00000187823.4	transcript	ENST00000695839.1	protein_coding					186		chrX	TogoVar
RTL4_chrX_112078016_112462514	112124795	TAAAGAA TAAAGAA	T T	intron_variant intron_variant	MODIFIER	HG01106.hp1 HG01106.hp1	a0002 a0002	a0002c0001 a0002c0001	a0002c0001t0001 a0002c0001t0001	a0002c0001t0001g0014 a0002c0001t0001g0014	1	134	0.0075	-6	c.-56 others(25): Show c.-563-6184_-563-6179delGAAAAA		RTL4	ENSG00000187823.4	transcript	ENST00000695839.1	protein_coding	1/4					INFO_REALIGN_3_PRIME	chrX	TogoVar
RTL4_chrX_112078016_112462514	112157064	TTGTGTG TTGTGTG	T T	intron_variant intron_variant	MODIFIER	HG03492.hp1 HG03492.hp1	a0002 a0002	a0002c0001 a0002c0001	a0002c0001t0001 a0002c0001t0001	a0002c0001t0001g0047 a0002c0001t0001g0047	1	134	0.0075	-6	c.-44 others(27): Show c.-445+25995_-445+26000delGTGTGT		RTL4	ENSG00000187823.4	transcript	ENST00000695839.1	protein_coding	2/4					INFO_REALIGN_3_PRIME	chrX	TogoVar
RTL4_chrX_112078016_112462514	112169086	TTCTTTC TTCTTTC	T T	intron_variant intron_variant	MODIFIER	HG00280.hp1 HG00621.hp1 HG00642.hp1 others(67): Show HG00280.hp1 HG00621.hp1 HG00642.hp1 HG00738.hp1 HG01074.hp1 HG01167.hp1 HG01168.hp2 HG01255.hp1 HG01256.hp1 HG01258.hp1 HG01261.hp1 HG01433.hp1 HG01515.hp1 HG01884.hp1 HG01884.hp2 HG01943.hp1 HG01952.hp1 HG02015.hp1 HG02040.hp1 HG02056.hp1 HG02074.hp1 HG02083.hp1 HG02132.hp1 HG02258.hp1 HG02451.hp1 HG02572.hp1 HG02630.hp2 HG02698.hp1 HG02735.hp1 HG02738.hp1 HG02922.hp1 HG02922.hp2 HG03017.hp1 HG03098.hp1 HG03130.hp1 HG03195.hp1 HG03490.hp1 HG03688.hp1 HG03942.hp1 HG04115.hp1 HG04228.hp1 NA18522.hp1 NA18747.hp1 NA18906.hp2 NA18944.hp1 NA18945.hp1 NA18953.hp1 NA18955.hp1 NA18960.hp1 NA18965.hp2 NA18970.hp1 NA18971.hp1 NA18983.hp1 NA18984.hp1 NA18986.hp1 NA18989.hp1 NA18990.hp1 NA18994.hp1 NA18995.hp1 NA19007.hp1 NA19009.hp1 NA19030.hp1 NA19056.hp1 NA19060.hp1 NA19063.hp1 NA19079.hp1 NA19083.hp1 NA19085.hp1 NA19091.hp1 NA20905.hp1	a0001 a0002 a0003 others(1): Show a0001 a0002 a0003 a0004	a0001c0002 a0001c0003 a0002c0001 others(3): Show a0001c0002 a0001c0003 a0002c0001 a0003c0004 a0003c0005 a0004c0007	a0001c0002t0002 a0001c0002t0004 a0001c0003t0003 others(12): Show a0001c0002t0002 a0001c0002t0004 a0001c0003t0003 a0001c0003t0017 a0002c0001t0001 a0002c0001t0008 a0002c0001t0009 a0002c0001t0010 a0002c0001t0014 a0002c0001t0020 a0003c0004t0001 a0003c0004t0006 a0003c0004t0012 a0003c0005t0001 a0004c0007t0001	a0001c0002t0002g0004 a0001c0002t0002g0017 a0001c0002t0002g0027 others(67): Show a0001c0002t0002g0004 a0001c0002t0002g0017 a0001c0002t0002g0027 a0001c0002t0002g0029 a0001c0002t0002g0032 a0001c0002t0002g0042 a0001c0002t0002g0043 a0001c0002t0002g0060 a0001c0002t0002g0061 a0001c0002t0002g0063 a0001c0002t0002g0064 a0001c0002t0002g0069 a0001c0002t0002g0072 a0001c0002t0002g0078 a0001c0002t0002g0096 a0001c0002t0002g0098 a0001c0002t0002g0102 a0001c0002t0002g0104 a0001c0002t0002g0109 a0001c0002t0002g0110 a0001c0002t0002g0112 a0001c0002t0002g0131 a0001c0002t0002g0134 a0001c0002t0004g0018 a0001c0003t0003g0120 a0001c0003t0017g0125 a0002c0001t0001g0003 a0002c0001t0001g0008 a0002c0001t0001g0019 a0002c0001t0001g0036 a0002c0001t0001g0038 a0002c0001t0001g0045 a0002c0001t0001g0046 a0002c0001t0001g0048 a0002c0001t0001g0049 a0002c0001t0001g0050 a0002c0001t0001g0051 a0002c0001t0001g0055 a0002c0001t0001g0057 a0002c0001t0001g0058 a0002c0001t0001g0059 a0002c0001t0001g0065 a0002c0001t0001g0067 a0002c0001t0001g0068 a0002c0001t0001g0073 a0002c0001t0001g0075 a0002c0001t0001g0076 a0002c0001t0001g0077 a0002c0001t0001g0081 a0002c0001t0001g0082 a0002c0001t0001g0083 a0002c0001t0001g0091 a0002c0001t0001g0092 a0002c0001t0001g0103 a0002c0001t0001g0108 a0002c0001t0001g0133 a0002c0001t0008g0021 a0002c0001t0009g0037 a0002c0001t0010g0056 a0002c0001t0014g0115 a0002c0001t0020g0023 a0003c0004t0001g0041 a0003c0004t0001g0087 a0003c0004t0006g0039 a0003c0004t0012g0052 a0003c0005t0001g0010 a0003c0005t0001g0088 a0003c0005t0001g0089 a0003c0005t0001g0130 a0004c0007t0001g0022	70	134	0.5224	-6	c.-44 others(27): Show c.-445+37987_-445+37992delCTTTCT		RTL4	ENSG00000187823.4	transcript	ENST00000695839.1	protein_coding	2/4					INFO_REALIGN_3_PRIME	chrX	TogoVar
RTL4_chrX_112078016_112462514	112185376	AATATAT AATATAT	A A	intron_variant intron_variant	MODIFIER	HG02257.hp1 HG02280.hp2 HG02965.hp1 others(2): Show HG02257.hp1 HG02280.hp2 HG02965.hp1 HG03225.hp1 HG03471.hp1	a0001 a0001	a0001c0002 a0001c0003 a0001c0002 a0001c0003	a0001c0002t0002 a0001c0002t0007 a0001c0003t0002 others(1): Show a0001c0002t0002 a0001c0002t0007 a0001c0003t0002 a0001c0003t0003	a0001c0002t0002g0011 a0001c0002t0002g0035 a0001c0002t0007g0128 others(2): Show a0001c0002t0002g0011 a0001c0002t0002g0035 a0001c0002t0007g0128 a0001c0003t0002g0012 a0001c0003t0003g0013	5	134	0.0373	-6	c.-44 others(27): Show c.-445+54297_-445+54302delTATATA		RTL4	ENSG00000187823.4	transcript	ENST00000695839.1	protein_coding	2/4					INFO_REALIGN_3_PRIME	chrX	TogoVar
RTL4_chrX_112078016_112462514	112201973	TTGTGTG TTGTGTG	T T	intron_variant intron_variant	MODIFIER	HG02257.hp1 HG02280.hp2 HG02965.hp1 others(2): Show HG02257.hp1 HG02280.hp2 HG02965.hp1 HG03225.hp1 HG03471.hp1	a0001 a0001	a0001c0002 a0001c0003 a0001c0002 a0001c0003	a0001c0002t0002 a0001c0002t0007 a0001c0003t0002 others(1): Show a0001c0002t0002 a0001c0002t0007 a0001c0003t0002 a0001c0003t0003	a0001c0002t0002g0011 a0001c0002t0002g0035 a0001c0002t0007g0128 others(2): Show a0001c0002t0002g0011 a0001c0002t0002g0035 a0001c0002t0007g0128 a0001c0003t0002g0012 a0001c0003t0003g0013	5	134	0.0373	-6	c.-44 others(27): Show c.-445+70894_-445+70899delGTGTGT		RTL4	ENSG00000187823.4	transcript	ENST00000695839.1	protein_coding	2/4					INFO_REALIGN_3_PRIME	chrX	TogoVar
RTL4_chrX_112078016_112462514	112202537	CATTATT CATTATT	C C	intron_variant intron_variant	MODIFIER	HG02572.hp1 HG02922.hp1 HG03130.hp1 others(2): Show HG02572.hp1 HG02922.hp1 HG03130.hp1 NA18906.hp1 NA18906.hp2	a0001 a0002 a0003 a0001 a0002 a0003	a0001c0002 a0002c0001 a0003c0004 a0001c0002 a0002c0001 a0003c0004	a0001c0002t0002 a0001c0002t0004 a0002c0001t0001 others(1): Show a0001c0002t0002 a0001c0002t0004 a0002c0001t0001 a0003c0004t0001	a0001c0002t0002g0017 a0001c0002t0002g0131 a0001c0002t0004g0018 others(2): Show a0001c0002t0002g0017 a0001c0002t0002g0131 a0001c0002t0004g0018 a0002c0001t0001g0019 a0003c0004t0001g0116	5	134	0.0373	-6	c.-44 others(27): Show c.-445+71472_-445+71477delTATTAT		RTL4	ENSG00000187823.4	transcript	ENST00000695839.1	protein_coding	2/4					INFO_REALIGN_3_PRIME	chrX	TogoVar
RTL4_chrX_112078016_112462514	112289773	ATGTGTG ATGTGTG	A A	intron_variant intron_variant	MODIFIER	HG02280.hp1 HG02976.hp1 HG03139.hp1 others(1): Show HG02280.hp1 HG02976.hp1 HG03139.hp1 HG03209.hp1	a0001 a0001	a0001c0002 a0001c0003 a0001c0002 a0001c0003	a0001c0002t0002 a0001c0002t0004 a0001c0003t0005 a0001c0002t0002 a0001c0002t0004 a0001c0003t0005	a0001c0002t0002g0132 a0001c0002t0004g0015 a0001c0002t0004g0031 others(1): Show a0001c0002t0002g0132 a0001c0002t0004g0015 a0001c0002t0004g0031 a0001c0003t0005g0016	4	134	0.0299	-6	c.-44 others(27): Show c.-444-16570_-444-16565delGTGTGT		RTL4	ENSG00000187823.4	transcript	ENST00000695839.1	protein_coding	2/4					INFO_REALIGN_3_PRIME	chrX	TogoVar
RTL4_chrX_112078016_112462514	112291367	TACACAC TACACAC	T T	intron_variant intron_variant	MODIFIER	HG01074.hp1 HG02895.hp1 HG06807.hp1 HG01074.hp1 HG02895.hp1 HG06807.hp1	a0001 a0003 a0001 a0003	a0001c0002 a0001c0003 a0003c0005 a0001c0002 a0001c0003 a0003c0005	a0001c0002t0002 a0001c0003t0003 a0003c0005t0001 a0001c0002t0002 a0001c0003t0003 a0003c0005t0001	a0001c0002t0002g0025 a0001c0003t0003g0028 a0003c0005t0001g0089 a0001c0002t0002g0025 a0001c0003t0003g0028 a0003c0005t0001g0089	3	134	0.0224	-6	c.-44 others(27): Show c.-444-14956_-444-14951delCACACA		RTL4	ENSG00000187823.4	transcript	ENST00000695839.1	protein_coding	2/4					INFO_REALIGN_3_PRIME	chrX	TogoVar
RTL4_chrX_112078016_112462514	112304639	CTTTTTT CTTTTTT	C C	intron_variant intron_variant	MODIFIER	HG01106.hp1 HG01884.hp2 HG02055.hp1 others(6): Show HG01106.hp1 HG01884.hp2 HG02055.hp1 HG02145.hp1 HG02451.hp1 HG02630.hp2 HG02965.hp1 HG06807.hp1 NA18522.hp1	a0001 a0002 a0001 a0002	a0001c0002 a0001c0003 a0002c0001 a0001c0002 a0001c0003 a0002c0001	a0001c0002t0002 a0001c0003t0017 a0002c0001t0001 a0001c0002t0002 a0001c0003t0017 a0002c0001t0001	a0001c0002t0002g0011 a0001c0002t0002g0025 a0001c0002t0002g0027 others(6): Show a0001c0002t0002g0011 a0001c0002t0002g0025 a0001c0002t0002g0027 a0001c0002t0002g0032 a0001c0002t0002g0109 a0001c0002t0002g0118 a0001c0003t0017g0125 a0002c0001t0001g0014 a0002c0001t0001g0026	9	134	0.0672	-6	c.-44 others(25): Show c.-444-1701_-444-1696delTTTTTT		RTL4	ENSG00000187823.4	transcript	ENST00000695839.1	protein_coding	2/4					INFO_REALIGN_3_PRIME	chrX	TogoVar
RTL4_chrX_112078016_112462514	112310369	CATATAT CATATAT	C C	intron_variant intron_variant	MODIFIER	HG01256.hp1 HG01258.hp1 HG01358.hp1 others(15): Show HG01256.hp1 HG01258.hp1 HG01358.hp1 HG02129.hp1 HG02257.hp2 HG02622.hp2 HG02735.hp1 HG03225.hp1 HG03654.hp1 HG03942.hp1 NA18944.hp1 NA18945.hp1 NA18966.hp1 NA18983.hp1 NA18984.hp1 NA19000.hp1 NA19007.hp1 NA19091.hp1	a0001 a0002 a0003 a0001 a0002 a0003	a0001c0002 a0001c0003 a0002c0001 others(2): Show a0001c0002 a0001c0003 a0002c0001 a0003c0004 a0003c0005	a0001c0002t0002 a0001c0002t0004 a0001c0003t0003 others(3): Show a0001c0002t0002 a0001c0002t0004 a0001c0003t0003 a0002c0001t0001 a0003c0004t0012 a0003c0005t0001	a0001c0002t0002g0002 a0001c0002t0002g0004 a0001c0002t0002g0035 others(15): Show a0001c0002t0002g0002 a0001c0002t0002g0004 a0001c0002t0002g0035 a0001c0002t0002g0040 a0001c0002t0002g0072 a0001c0002t0002g0078 a0001c0002t0002g0079 a0001c0002t0004g0030 a0001c0003t0003g0123 a0002c0001t0001g0036 a0002c0001t0001g0048 a0002c0001t0001g0049 a0002c0001t0001g0058 a0002c0001t0001g0100 a0002c0001t0001g0103 a0002c0001t0001g0107 a0003c0004t0012g0052 a0003c0005t0001g0088	18	134	0.1343	-6	c.-28 others(25): Show c.-285+3890_-285+3895delATATAT		RTL4	ENSG00000187823.4	transcript	ENST00000695839.1	protein_coding	3/4					INFO_REALIGN_3_PRIME	chrX	TogoVar
RTL4_chrX_112078016_112462514	112356579	GGTGTGT GGTGTGT	G G	intron_variant intron_variant	MODIFIER	NA18943.hp1 NA18943.hp1	a0001 a0001	a0001c0002 a0001c0002	a0001c0002t0002 a0001c0002t0002	a0001c0002t0002g0086 a0001c0002t0002g0086	1	134	0.0075	-6	c.-28 others(27): Show c.-285+50086_-285+50091delGTGTGT		RTL4	ENSG00000187823.4	transcript	ENST00000695839.1	protein_coding	3/4					INFO_REALIGN_3_PRIME	chrX	TogoVar
RTL4_chrX_112078016_112462514	112390106	AATATAT AATATAT	A A	intron_variant intron_variant	MODIFIER	HG01255.hp1 HG02257.hp1 HG02280.hp2 others(10): Show HG01255.hp1 HG02257.hp1 HG02280.hp2 HG02572.hp1 HG02698.hp1 HG02735.hp1 HG02738.hp1 HG03139.hp1 NA18953.hp1 NA18990.hp1 NA19009.hp1 NA19068.hp1 homoSapiens_chm13v2.hp1	a0001 a0002 a0003 a0001 a0002 a0003	a0001c0002 a0001c0003 a0002c0001 others(1): Show a0001c0002 a0001c0003 a0002c0001 a0003c0004	a0001c0002t0002 a0001c0002t0007 a0001c0003t0003 others(4): Show a0001c0002t0002 a0001c0002t0007 a0001c0003t0003 a0001c0003t0005 a0002c0001t0001 a0002c0001t0008 a0003c0004t0006	a0001c0002t0002g0131 a0001c0002t0007g0128 a0001c0003t0003g0013 others(10): Show a0001c0002t0002g0131 a0001c0002t0007g0128 a0001c0003t0003g0013 a0001c0003t0005g0016 a0002c0001t0001g0003 a0002c0001t0001g0051 a0002c0001t0001g0073 a0002c0001t0001g0076 a0002c0001t0001g0095 a0002c0001t0001g0103 a0002c0001t0001g0106 a0002c0001t0008g0021 a0003c0004t0006g0039	13	134	0.0970	-6	c.-28 others(27): Show c.-284-40959_-284-40954delATATAT		RTL4	ENSG00000187823.4	transcript	ENST00000695839.1	protein_coding	3/4					INFO_REALIGN_3_PRIME	chrX	TogoVar

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