view | regionname | pos | ref | alt | annotation | impact | samples | ahapids | chapids | thapids | thapids | ac | an | af | len | hgvs_c | hgvs_p | genename | geneid | featuretype | featureid | transcript_biotype | rank | cdna cdna pos length
|
cds cds pos length
|
aa aa pos length
|
distance | status | chr | external |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
SHFL_chr19_10081317_10098243 | 10088953 | TATAATA | T | intron_variant | MODIFIER | HG01168.hp1 HG01255.hp1 HG01433.hp1 others(2): Show |
a0001 | a0001c0001 | a0001c0001t0001 | a0001c0001t0001g0041 a0001c0001t0001g0090 a0001c0001t0001g0113 others(1): Show |
5 | 444 | 0.0113 | -6 | c.196 others(21): Show |
SHFL | ENSG00000130813.18 | transcript | ENST00000253110.16 | protein_coding | 3/7 | INFO_REALIGN_3_PRIME | chr19 | TogoVar | ||||||
SHF_chr15_45162214_45192966 | 45173832 | GGGCAGA | G | intron_variant | MODIFIER | HG00099.hp2 HG00140.hp2 HG01168.hp1 others(8): Show |
a0001 | a0001c0001 | a0001c0001t0002 | a0001c0001t0002g0009 a0001c0001t0002g0120 a0001c0001t0002g0126 others(1): Show |
11 | 398 | 0.0276 | -6 | c.848 others(21): Show |
SHF | ENSG00000138606.20 | transcript | ENST00000690270.1 | protein_coding | 3/6 | chr15 | TogoVar | |||||||
SHISA2_chr13_26039597_26057016 | 26040615 | TCTTTTC | T | downstream_gene_variant | MODIFIER | HG00140.hp1 HG00323.hp2 HG00438.hp1 others(91): Show |
a0001a0002a0005others(2): Show | a0001c0001a0001c0003a0002c0004others(3): Show | a0001c0001t0001a0001c0001t0019a0001c0001t0020others(23): Show | a0001c0001t0001g0015 a0001c0001t0001g0016 a0001c0001t0001g0017 others(57): Show |
94 | 456 | 0.2061 | -6 | c.*58 others(17): Show |
SHISA2 | ENSG00000180730.5 | transcript | ENST00000319420.4 | protein_coding | 3981 | chr13 | TogoVar | |||||||
SHISA2_chr13_26039597_26057016 | 26041100 | GACAGAC | G | downstream_gene_variant | MODIFIER | HG00408.hp2 HG00423.hp1 HG00544.hp1 others(73): Show |
a0001a0002 | a0001c0001a0001c0002a0001c0003others(2): Show | a0001c0001t0027a0001c0002t0002a0001c0002t0007others(12): Show | a0001c0001t0027g0202 a0001c0002t0002g0003 a0001c0002t0002g0012 others(34): Show |
76 | 456 | 0.1667 | -6 | c.*54 others(17): Show |
SHISA2 | ENSG00000180730.5 | transcript | ENST00000319420.4 | protein_coding | 3496 | chr13 | TogoVar | |||||||
SHISA2_chr13_26039597_26057016 | 26049863 | AACACAC | A | intron_variant | MODIFIER | HG00423.hp2 HG00609.hp2 HG02040.hp2 others(14): Show |
a0001 | a0001c0003a0001c0009 | a0001c0003t0008a0001c0003t0009a0001c0003t0015others(5): Show | a0001c0003t0008g0242 a0001c0003t0008g0244 a0001c0003t0009g0008 others(7): Show |
17 | 456 | 0.0373 | -6 | c.334 others(21): Show |
SHISA2 | ENSG00000180730.5 | transcript | ENST00000319420.4 | protein_coding | 1/1 | chr13 | TogoVar | |||||||
SHISA6_chr17_11236213_11569063 | 11237447 | GGAAGGA | G | upstream_gene_variant | MODIFIER | HG01109.hp1 HG01891.hp2 HG02258.hp2 others(1): Show |
a0001 | a0001c0001a0001c0004a0001c0009 | a0001c0001t0008a0001c0001t0038a0001c0004t0016others(1): Show | a0001c0001t0008g0136 a0001c0001t0038g0141 a0001c0004t0016g0117 others(1): Show |
4 | 192 | 0.0208 | -6 | c.-39 others(17): Show |
SHISA6 | ENSG00000188803.15 | transcript | ENST00000441885.8 | protein_coding | 3765 | chr17 | TogoVar | |||||||
SHISA6_chr17_11236213_11569063 | 11237575 | GGAAGAA | G | upstream_gene_variant | MODIFIER | HG02258.hp2 HG02559.hp1 NA18906.hp2 others(1): Show |
a0001 | a0001c0001a0001c0002a0001c0006 | a0001c0001t0008a0001c0001t0027a0001c0002t0010others(1): Show | a0001c0001t0008g0136 a0001c0001t0027g0073 a0001c0002t0010g0099 others(1): Show |
4 | 192 | 0.0208 | -6 | c.-38 others(17): Show |
SHISA6 | ENSG00000188803.15 | transcript | ENST00000441885.8 | protein_coding | 3637 | chr17 | TogoVar | |||||||
SHISA6_chr17_11236213_11569063 | 11251547 | ATGGACC | A | intron_variant | MODIFIER | HG01109.hp1 HG02965.hp1 HG03209.hp1 |
a0001 | a0001c0001 | a0001c0001t0004a0001c0001t0038 | a0001c0001t0004g0014 a0001c0001t0004g0112 a0001c0001t0038g0141 |
3 | 192 | 0.0156 | -6 | c.638 others(23): Show |
SHISA6 | ENSG00000188803.15 | transcript | ENST00000441885.8 | protein_coding | 1/5 | INFO_REALIGN_3_PRIME | chr17 | TogoVar | ||||||
SHISA6_chr17_11236213_11569063 | 11277241 | TTCTCTC | T | intron_variant | MODIFIER | HG01074.hp1 HG01123.hp1 HG02280.hp2 others(5): Show |
a0001a0002 | a0001c0001a0001c0002a0001c0011others(1): Show | a0001c0001t0001a0001c0001t0004a0001c0001t0015others(3): Show | a0001c0001t0001g0085 a0001c0001t0001g0086 a0001c0001t0004g0014 others(5): Show |
8 | 192 | 0.0417 | -6 | c.799 others(25): Show |
SHISA6 | ENSG00000188803.15 | transcript | ENST00000441885.8 | protein_coding | 2/5 | INFO_REALIGN_3_PRIME | chr17 | TogoVar | ||||||
SHISA6_chr17_11236213_11569063 | 11277280 | TCACACA | T | intron_variant | MODIFIER | HG03195.hp2 NA20805.hp2 |
a0001 | a0001c0001 | a0001c0001t0020a0001c0001t0049 | a0001c0001t0020g0078 a0001c0001t0049g0040 |
2 | 192 | 0.0104 | -6 | c.799 others(25): Show |
SHISA6 | ENSG00000188803.15 | transcript | ENST00000441885.8 | protein_coding | 2/5 | INFO_REALIGN_3_PRIME | chr17 | TogoVar | ||||||
SHISA6_chr17_11236213_11569063 | 11388790 | TTATATA | T | intron_variant | MODIFIER | HG00423.hp2 HG00738.hp1 HG01168.hp2 others(11): Show |
a0001 | a0001c0001a0001c0002a0001c0003others(1): Show | a0001c0001t0001a0001c0001t0004a0001c0001t0005others(10): Show | a0001c0001t0001g0039 a0001c0001t0001g0163 a0001c0001t0004g0130 others(11): Show |
14 | 192 | 0.0729 | -6 | c.895 others(23): Show |
SHISA6 | ENSG00000188803.15 | transcript | ENST00000441885.8 | protein_coding | 3/5 | INFO_REALIGN_3_PRIME | chr17 | TogoVar | ||||||
SHISA6_chr17_11236213_11569063 | 11481336 | ATGTGTG | A | intron_variant | MODIFIER | HG00735.hp1 HG01109.hp2 HG01258.hp1 others(18): Show |
a0001 | a0001c0001a0001c0002a0001c0006 | a0001c0001t0001a0001c0001t0002a0001c0001t0004others(8): Show | a0001c0001t0001g0023 a0001c0001t0001g0024 a0001c0001t0001g0025 others(18): Show |
21 | 192 | 0.1094 | -6 | c.896 others(25): Show |
SHISA6 | ENSG00000188803.15 | transcript | ENST00000441885.8 | protein_coding | 3/5 | INFO_REALIGN_3_PRIME | chr17 | TogoVar | ||||||
SHISA6_chr17_11236213_11569063 | 11481364 | GTGTATA | G | intron_variant | MODIFIER | HG00423.hp2 HG01168.hp1 HG01169.hp2 others(8): Show |
a0001 | a0001c0001a0001c0002 | a0001c0001t0001a0001c0001t0002a0001c0001t0003others(3): Show | a0001c0001t0001g0144 a0001c0001t0002g0029 a0001c0001t0002g0061 others(8): Show |
11 | 192 | 0.0573 | -6 | c.896 others(25): Show |
SHISA6 | ENSG00000188803.15 | transcript | ENST00000441885.8 | protein_coding | 3/5 | INFO_REALIGN_3_PRIME | chr17 | TogoVar | ||||||
SHISA6_chr17_11236213_11569063 | 11525646 | AAAAAAC | A | intron_variant | MODIFIER | HG02895.hp2 HG02896.hp1 HG02897.hp2 others(2): Show |
a0001 | a0001c0001a0001c0003 | a0001c0001t0008a0001c0003t0007 | a0001c0001t0008g0087 a0001c0001t0008g0124 a0001c0001t0008g0125 others(2): Show |
5 | 192 | 0.0260 | -6 | c.896 others(25): Show |
SHISA6 | ENSG00000188803.15 | transcript | ENST00000441885.8 | protein_coding | 3/5 | INFO_REALIGN_3_PRIME | chr17 | TogoVar | ||||||
SHISA6_chr17_11236213_11569063 | 11526880 | CATATAT | C | intron_variant | MODIFIER | HG00140.hp1 HG00735.hp1 HG01258.hp2 others(17): Show |
a0001a0003 | a0001c0001a0001c0002a0001c0003others(2): Show | a0001c0001t0002a0001c0001t0003a0001c0001t0015others(13): Show | a0001c0001t0002g0022 a0001c0001t0002g0029 a0001c0001t0002g0079 others(17): Show |
20 | 192 | 0.1042 | -6 | c.896 others(25): Show |
SHISA6 | ENSG00000188803.15 | transcript | ENST00000441885.8 | protein_coding | 3/5 | INFO_REALIGN_3_PRIME | chr17 | TogoVar | ||||||
SHISA6_chr17_11236213_11569063 | 11531211 | CTGTGTG | C | intron_variant | MODIFIER | HG00738.hp1 HG01071.hp2 HG01258.hp2 others(8): Show |
a0001 | a0001c0001a0001c0002a0001c0004others(1): Show | a0001c0001t0003a0001c0001t0014a0001c0001t0045others(4): Show | a0001c0001t0003g0026 a0001c0001t0003g0045 a0001c0001t0003g0053 others(8): Show |
11 | 192 | 0.0573 | -6 | c.896 others(25): Show |
SHISA6 | ENSG00000188803.15 | transcript | ENST00000441885.8 | protein_coding | 3/5 | INFO_REALIGN_3_PRIME | chr17 | TogoVar | ||||||
SHISA6_chr17_11236213_11569063 | 11544223 | CTTAAAA | C | intron_variant | MODIFIER | HG01109.hp2 HG01515.hp1 |
a0001 | a0001c0001 | a0001c0001t0002 | a0001c0001t0002g0006 a0001c0001t0002g0164 |
2 | 192 | 0.0104 | -6 | c.896 others(23): Show |
SHISA6 | ENSG00000188803.15 | transcript | ENST00000441885.8 | protein_coding | 3/5 | INFO_REALIGN_3_PRIME | chr17 | TogoVar | ||||||
SHISA7_chr19_55423740_55448300 | 55448070 | CACACAT | C | upstream_gene_variant | MODIFIER | HG00099.hp1 HG00408.hp2 HG00423.hp1 others(146): Show |
a0000a0001a0002 | a0000c0002a0001c0001a0001c0003others(2): Show | a0000c0002t0001a0000c0002t0007a0001c0001t0001others(19): Show | a0000c0002t0001g0095 a0000c0002t0001g0105 a0000c0002t0007g0171 others(73): Show |
149 | 372 | 0.4005 | -6 | c.-52 others(17): Show |
SHISA7 | ENSG00000187902.13 | transcript | ENST00000376325.10 | protein_coding | 4771 | chr19 | TogoVar | |||||||
SHISA8_chr22_41904543_41920074 | 41915074 | TGGCTCC | T | upstream_gene_variant | MODIFIER | HG00099.hp1 HG00280.hp1 HG00639.hp1 others(54): Show |
a0001a0002a0003others(1): Show | a0001c0001a0001c0009a0002c0002others(3): Show | a0001c0001t0004a0001c0001t0005a0001c0009t0003others(4): Show | a0001c0001t0004g0015 a0001c0001t0005g0047 a0001c0009t0003g0051 others(9): Show |
57 | 376 | 0.1516 | -6 | c.-41 others(15): Show |
SHISA8 | ENSG00000234965.3 | transcript | ENST00000621082.2 | protein_coding | 1 | chr22 | TogoVar | |||||||
SHISA9_chr16_12896598_13245416 | 12953208 | TCAACAA | T | intron_variant | MODIFIER | HG02071.hp2 HG02135.hp1 |
a0001 | a0001c0001 | a0001c0001t0001a0001c0001t0002 | a0001c0001t0001g0142 a0001c0001t0002g0153 |
2 | 214 | 0.0094 | -6 | c.691 others(25): Show |
SHISA9 | ENSG00000237515.10 | transcript | ENST00000558583.3 | protein_coding | 2/4 | INFO_REALIGN_3_PRIME | chr16 | TogoVar | ||||||
SHISA9_chr16_12896598_13245416 | 12968189 | CAAAAAA | C | intron_variant | MODIFIER | HG01074.hp1 HG01884.hp1 HG02280.hp1 others(3): Show |
a0001 | a0001c0001a0001c0002 | a0001c0001t0019a0001c0001t0031a0001c0001t0049others(3): Show | a0001c0001t0019g0023 a0001c0001t0031g0082 a0001c0001t0049g0074 others(3): Show |
6 | 214 | 0.0280 | -6 | c.691 others(25): Show |
SHISA9 | ENSG00000237515.10 | transcript | ENST00000558583.3 | protein_coding | 2/4 | INFO_REALIGN_3_PRIME | chr16 | TogoVar | ||||||
SHISA9_chr16_12896598_13245416 | 12970412 | TATATAC | T | intron_variant | MODIFIER | HG02258.hp2 HG02738.hp1 NA20300.hp1 |
a0001 | a0001c0001 | a0001c0001t0008a0001c0001t0009a0001c0001t0078 | a0001c0001t0008g0111 a0001c0001t0009g0064 a0001c0001t0078g0090 |
3 | 214 | 0.0140 | -6 | c.691 others(25): Show |
SHISA9 | ENSG00000237515.10 | transcript | ENST00000558583.3 | protein_coding | 2/4 | INFO_REALIGN_3_PRIME | chr16 | TogoVar | ||||||
SHISA9_chr16_12896598_13245416 | 12970469 | GTATATA | G | intron_variant | MODIFIER | HG01258.hp1 HG02683.hp1 |
a0001 | a0001c0001 | a0001c0001t0002a0001c0001t0004 | a0001c0001t0002g0169 a0001c0001t0004g0025 |
2 | 214 | 0.0094 | -6 | c.691 others(25): Show |
SHISA9 | ENSG00000237515.10 | transcript | ENST00000558583.3 | protein_coding | 2/4 | INFO_REALIGN_3_PRIME | chr16 | TogoVar | ||||||
SHISA9_chr16_12896598_13245416 | 12970497 | ATTTTTT | A | intron_variant | MODIFIER | HG00673.hp1 HG02015.hp1 HG02630.hp2 others(6): Show |
a0001 | a0001c0001a0001c0004 | a0001c0001t0001a0001c0001t0003a0001c0001t0008others(4): Show | a0001c0001t0001g0084 a0001c0001t0003g0099 a0001c0001t0003g0147 others(6): Show |
9 | 214 | 0.0421 | -6 | c.691 others(25): Show |
SHISA9 | ENSG00000237515.10 | transcript | ENST00000558583.3 | protein_coding | 2/4 | INFO_REALIGN_3_PRIME | chr16 | TogoVar | ||||||
SHISA9_chr16_12896598_13245416 | 13008668 | TCCCTCC | T | intron_variant | MODIFIER | HG02145.hp1 HG02258.hp1 HG02451.hp1 others(1): Show |
a0001 | a0001c0002 | a0001c0002t0006a0001c0002t0009a0001c0002t0060 | a0001c0002t0006g0185 a0001c0002t0009g0181 a0001c0002t0009g0184 others(1): Show |
4 | 214 | 0.0187 | -6 | c.691 others(25): Show |
SHISA9 | ENSG00000237515.10 | transcript | ENST00000558583.3 | protein_coding | 2/4 | INFO_REALIGN_3_PRIME | chr16 | TogoVar | ||||||
SHISA9_chr16_12896598_13245416 | 13019822 | TTCTTTC | T | intron_variant | MODIFIER | HG02109.hp1 HG03540.hp2 HG03669.hp2 others(1): Show |
a0001a0004 | a0001c0001a0004c0007 | a0001c0001t0011a0001c0001t0061a0001c0001t0065others(1): Show | a0001c0001t0011g0123 a0001c0001t0061g0073 a0001c0001t0065g0056 others(1): Show |
4 | 214 | 0.0187 | -6 | c.691 others(27): Show |
SHISA9 | ENSG00000237515.10 | transcript | ENST00000558583.3 | protein_coding | 2/4 | INFO_REALIGN_3_PRIME | chr16 | TogoVar | ||||||
SHISA9_chr16_12896598_13245416 | 13045597 | TGAGGGA | T | intron_variant | MODIFIER | HG00621.hp2 HG02015.hp2 HG02155.hp1 others(6): Show |
a0001 | a0001c0001a0001c0004 | a0001c0001t0002a0001c0001t0011a0001c0001t0015others(5): Show | a0001c0001t0002g0161 a0001c0001t0011g0139 a0001c0001t0015g0190 others(6): Show |
9 | 214 | 0.0421 | -6 | c.691 others(27): Show |
SHISA9 | ENSG00000237515.10 | transcript | ENST00000558583.3 | protein_coding | 2/4 | INFO_REALIGN_3_PRIME | chr16 | TogoVar | ||||||
SHISA9_chr16_12896598_13245416 | 13049156 | ATGTGTG | A | intron_variant | MODIFIER | HG00673.hp2 HG01255.hp1 HG01258.hp2 others(5): Show |
a0001 | a0001c0001a0001c0002 | a0001c0001t0002a0001c0001t0010a0001c0001t0013others(5): Show | a0001c0001t0002g0012 a0001c0001t0010g0188 a0001c0001t0013g0016 others(5): Show |
8 | 214 | 0.0374 | -6 | c.691 others(27): Show |
SHISA9 | ENSG00000237515.10 | transcript | ENST00000558583.3 | protein_coding | 2/4 | INFO_REALIGN_3_PRIME | chr16 | TogoVar | ||||||
SHISA9_chr16_12896598_13245416 | 13069418 | GTGTGTA | G | intron_variant | MODIFIER | HG02559.hp2 HG03453.hp1 HG03471.hp1 others(1): Show |
a0001 | a0001c0001 | a0001c0001t0004a0001c0001t0006a0001c0001t0014others(1): Show | a0001c0001t0004g0080 a0001c0001t0006g0079 a0001c0001t0014g0077 others(1): Show |
4 | 214 | 0.0187 | -6 | c.692 others(27): Show |
SHISA9 | ENSG00000237515.10 | transcript | ENST00000558583.3 | protein_coding | 2/4 | INFO_REALIGN_3_PRIME | chr16 | TogoVar | ||||||
SHISA9_chr16_12896598_13245416 | 13070123 | CGTGTGT | C | intron_variant | MODIFIER | HG01081.hp1 HG02055.hp1 HG02145.hp2 others(5): Show |
a0001 | a0001c0001a0001c0002 | a0001c0001t0002a0001c0001t0005a0001c0001t0029others(5): Show | a0001c0001t0002g0115 a0001c0001t0005g0049 a0001c0001t0029g0005 others(5): Show |
8 | 214 | 0.0374 | -6 | c.692 others(27): Show |
SHISA9 | ENSG00000237515.10 | transcript | ENST00000558583.3 | protein_coding | 2/4 | INFO_REALIGN_3_PRIME | chr16 | TogoVar | ||||||
SHISA9_chr16_12896598_13245416 | 13106966 | TTCTCTC | T | intron_variant | MODIFIER | HG00280.hp1 HG00621.hp2 HG00639.hp2 others(57): Show |
a0001a0002 | a0001c0001a0001c0002a0001c0003others(1): Show | a0001c0001t0001a0001c0001t0002a0001c0001t0003others(40): Show | a0001c0001t0001g0011 a0001c0001t0001g0031 a0001c0001t0001g0087 others(57): Show |
60 | 214 | 0.2804 | -6 | c.692 others(25): Show |
SHISA9 | ENSG00000237515.10 | transcript | ENST00000558583.3 | protein_coding | 2/4 | INFO_REALIGN_3_PRIME | chr16 | TogoVar | ||||||
SHISA9_chr16_12896598_13245416 | 13107472 | GACACAC | G | intron_variant | MODIFIER | HG00438.hp2 HG01099.hp1 HG01255.hp1 others(12): Show |
a0001 | a0001c0001a0001c0002 | a0001c0001t0001a0001c0001t0002a0001c0001t0003others(8): Show | a0001c0001t0001g0089 a0001c0001t0001g0176 a0001c0001t0001g0199 others(12): Show |
15 | 214 | 0.0701 | -6 | c.692 others(25): Show |
SHISA9 | ENSG00000237515.10 | transcript | ENST00000558583.3 | protein_coding | 2/4 | INFO_REALIGN_3_PRIME | chr16 | TogoVar | ||||||
SHISA9_chr16_12896598_13245416 | 13121832 | TACACAC | T | intron_variant | MODIFIER | HG00280.hp2 HG00609.hp2 HG00673.hp2 others(42): Show |
a0001 | a0001c0001a0001c0002 | a0001c0001t0001a0001c0001t0002a0001c0001t0003others(26): Show | a0001c0001t0001g0011 a0001c0001t0001g0031 a0001c0001t0001g0058 others(42): Show |
45 | 214 | 0.2103 | -6 | c.692 others(25): Show |
SHISA9 | ENSG00000237515.10 | transcript | ENST00000558583.3 | protein_coding | 2/4 | INFO_REALIGN_3_PRIME | chr16 | TogoVar | ||||||
SHISA9_chr16_12896598_13245416 | 13132350 | CTAATAT | C | intron_variant | MODIFIER | HG02630.hp1 NA19043.hp2 |
a0001 | a0001c0001 | a0001c0001t0033a0001c0001t0055 | a0001c0001t0033g0156 a0001c0001t0055g0118 |
2 | 214 | 0.0094 | -6 | c.692 others(25): Show |
SHISA9 | ENSG00000237515.10 | transcript | ENST00000558583.3 | protein_coding | 2/4 | INFO_REALIGN_3_PRIME | chr16 | TogoVar | ||||||
SHISA9_chr16_12896598_13245416 | 13139435 | TCTCTTC | T | intron_variant | MODIFIER | HG01261.hp1 HG02257.hp1 HG02976.hp1 others(1): Show |
a0001a0002 | a0001c0001a0001c0002a0002c0005 | a0001c0001t0006a0001c0002t0006a0002c0005t0006 | a0001c0001t0006g0042 a0001c0001t0006g0083 a0001c0002t0006g0116 others(1): Show |
4 | 214 | 0.0187 | -6 | c.692 others(25): Show |
SHISA9 | ENSG00000237515.10 | transcript | ENST00000558583.3 | protein_coding | 2/4 | INFO_REALIGN_3_PRIME | chr16 | TogoVar | ||||||
SHISA9_chr16_12896598_13245416 | 13148689 | GCACACA | G | intron_variant | MODIFIER | HG00558.hp2 HG02129.hp2 |
a0001 | a0001c0001 | a0001c0001t0026a0001c0001t0042 | a0001c0001t0026g0146 a0001c0001t0042g0027 |
2 | 214 | 0.0094 | -6 | c.692 others(25): Show |
SHISA9 | ENSG00000237515.10 | transcript | ENST00000558583.3 | protein_coding | 2/4 | INFO_REALIGN_3_PRIME | chr16 | TogoVar | ||||||
SHISA9_chr16_12896598_13245416 | 13173153 | GCACACA | G | intron_variant | MODIFIER | HG01346.hp2 NA20905.hp1 |
a0001 | a0001c0001 | a0001c0001t0002a0001c0001t0072 | a0001c0001t0002g0173 a0001c0001t0072g0165 |
2 | 214 | 0.0094 | -6 | c.692 others(25): Show |
SHISA9 | ENSG00000237515.10 | transcript | ENST00000558583.3 | protein_coding | 2/4 | INFO_REALIGN_3_PRIME | chr16 | TogoVar | ||||||
SHISA9_chr16_12896598_13245416 | 13173377 | TACACAC | T | intron_variant | MODIFIER | HG01891.hp2 HG02809.hp2 HG03209.hp1 others(1): Show |
a0001 | a0001c0001 | a0001c0001t0003a0001c0001t0004a0001c0001t0024others(1): Show | a0001c0001t0003g0081 a0001c0001t0004g0041 a0001c0001t0024g0110 others(1): Show |
4 | 214 | 0.0187 | -6 | c.692 others(25): Show |
SHISA9 | ENSG00000237515.10 | transcript | ENST00000558583.3 | protein_coding | 2/4 | INFO_REALIGN_3_PRIME | chr16 | TogoVar | ||||||
SHISA9_chr16_12896598_13245416 | 13178842 | TTTGTTG | T | intron_variant | MODIFIER | HG00099.hp2 HG00140.hp2 HG00558.hp2 others(78): Show |
a0001a0002a0003 | a0001c0001a0001c0002a0002c0005others(1): Show | a0001c0001t0001a0001c0001t0002a0001c0001t0003others(49): Show | a0001c0001t0001g0008 a0001c0001t0001g0011 a0001c0001t0001g0085 others(78): Show |
81 | 214 | 0.3785 | -6 | c.692 others(25): Show |
SHISA9 | ENSG00000237515.10 | transcript | ENST00000558583.3 | protein_coding | 2/4 | INFO_REALIGN_3_PRIME | chr16 | TogoVar | ||||||
SHISA9_chr16_12896598_13245416 | 13181267 | TTATATA | T | intron_variant | MODIFIER | HG02083.hp1 HG02165.hp2 HG02698.hp1 others(1): Show |
a0001 | a0001c0001 | a0001c0001t0001a0001c0001t0028a0001c0001t0045 | a0001c0001t0001g0031 a0001c0001t0001g0176 a0001c0001t0028g0137 others(1): Show |
4 | 214 | 0.0187 | -6 | c.692 others(25): Show |
SHISA9 | ENSG00000237515.10 | transcript | ENST00000558583.3 | protein_coding | 2/4 | INFO_REALIGN_3_PRIME | chr16 | TogoVar | ||||||
SHISA9_chr16_12896598_13245416 | 13181308 | TATATAC | T | intron_variant | MODIFIER | HG01346.hp1 NA19000.hp1 |
a0001 | a0001c0001 | a0001c0001t0002a0001c0001t0004 | a0001c0001t0002g0207 a0001c0001t0004g0086 |
2 | 214 | 0.0094 | -6 | c.692 others(25): Show |
SHISA9 | ENSG00000237515.10 | transcript | ENST00000558583.3 | protein_coding | 2/4 | INFO_REALIGN_3_PRIME | chr16 | TogoVar | ||||||
SHISA9_chr16_12896598_13245416 | 13197104 | TACACAC | T | intron_variant | MODIFIER | NA18941.hp1 NA18970.hp1 |
a0001 | a0001c0001 | a0001c0001t0003a0001c0001t0067 | a0001c0001t0003g0204 a0001c0001t0067g0015 |
2 | 214 | 0.0094 | -6 | c.692 others(23): Show |
SHISA9 | ENSG00000237515.10 | transcript | ENST00000558583.3 | protein_coding | 2/4 | INFO_REALIGN_3_PRIME | chr16 | TogoVar | ||||||
SHISA9_chr16_12896598_13245416 | 13200440 | ACAGCAG | A | intron_variant | MODIFIER | HG01993.hp2 NA20905.hp1 |
a0001 | a0001c0001 | a0001c0001t0071a0001c0001t0072 | a0001c0001t0071g0007 a0001c0001t0072g0165 |
2 | 214 | 0.0094 | -6 | c.692 others(23): Show |
SHISA9 | ENSG00000237515.10 | transcript | ENST00000558583.3 | protein_coding | 2/4 | INFO_REALIGN_3_PRIME | chr16 | TogoVar | ||||||
SHISA9_chr16_12896598_13245416 | 13204088 | CTATCTA | C | intron_variant | MODIFIER | HG02055.hp1 HG02630.hp2 HG03453.hp1 others(1): Show |
a0001 | a0001c0001 | a0001c0001t0004a0001c0001t0006a0001c0001t0063others(1): Show | a0001c0001t0004g0080 a0001c0001t0006g0079 a0001c0001t0063g0138 others(1): Show |
4 | 214 | 0.0187 | -6 | c.847 others(21): Show |
SHISA9 | ENSG00000237515.10 | transcript | ENST00000558583.3 | protein_coding | 3/4 | INFO_REALIGN_3_PRIME | chr16 | TogoVar | ||||||
SHISA9_chr16_12896598_13245416 | 13222815 | TACACAC | T | intron_variant | MODIFIER | HG02129.hp1 HG03486.hp2 |
a0001 | a0001c0001 | a0001c0001t0004a0001c0001t0030 | a0001c0001t0004g0041 a0001c0001t0030g0013 |
2 | 214 | 0.0094 | -6 | c.895 others(23): Show |
SHISA9 | ENSG00000237515.10 | transcript | ENST00000558583.3 | protein_coding | 4/4 | INFO_REALIGN_3_PRIME | chr16 | TogoVar | ||||||
SHISA9_chr16_12896598_13245416 | 13238815 | TTTATTA | T | 3_prime_UTR_variant | MODIFIER | HG02055.hp1 HG02647.hp1 HG03654.hp2 others(1): Show |
a0001 | a0001c0001 | a0001c0001t0055a0001c0001t0064a0001c0001t0076others(1): Show | a0001c0001t0055g0118 a0001c0001t0064g0112 a0001c0001t0076g0108 others(1): Show |
4 | 214 | 0.0187 | -6 | c.*34 others(17): Show |
SHISA9 | ENSG00000237515.10 | transcript | ENST00000558583.3 | protein_coding | 5/5 | 3438 | INFO_REALIGN_3_PRIME | chr16 | TogoVar | |||||
SHISAL1_chr22_44238665_44317951 | 44261094 | TATATAC | T | intron_variant | MODIFIER | HG02145.hp2 HG02886.hp2 HG03516.hp2 |
a0001 | a0001c0032a0001c0035a0001c0036 | a0001c0032t0081a0001c0035t0042a0001c0036t0082 | a0001c0032t0081g0247 a0001c0035t0042g0033 a0001c0036t0082g0121 |
3 | 380 | 0.0079 | -6 | c.600 others(25): Show |
SHISAL1 | ENSG00000138944.8 | transcript | ENST00000381176.5 | protein_coding | 4/4 | chr22 | TogoVar | |||||||
SHISAL1_chr22_44238665_44317951 | 44269468 | ACACGCG | A | intron_variant | MODIFIER | NA18946.hp2 NA18949.hp2 NA18971.hp1 others(2): Show |
a0001 | a0001c0010a0001c0081a0001c0082others(1): Show | a0001c0010t0005a0001c0010t0016a0001c0081t0016others(2): Show | a0001c0010t0005g0333 a0001c0010t0016g0050 a0001c0081t0016g0051 others(2): Show |
5 | 380 | 0.0132 | -6 | c.599 others(25): Show |
SHISAL1 | ENSG00000138944.8 | transcript | ENST00000381176.5 | protein_coding | 4/4 | chr22 | TogoVar | |||||||
SHISAL1_chr22_44238665_44317951 | 44269472 | GCGCACA | G | intron_variant | MODIFIER | HG00099.hp1 HG00099.hp2 HG00140.hp2 others(179): Show |
a0001a0002 | a0001c0001a0001c0004a0001c0005others(167): Show | a0001c0001t0007a0001c0004t0010a0001c0005t0063others(171): Show | a0001c0001t0007g0001 a0001c0001t0007g0022 a0001c0004t0010g0065 others(174): Show |
182 | 380 | 0.4790 | -6 | c.599 others(25): Show |
SHISAL1 | ENSG00000138944.8 | transcript | ENST00000381176.5 | protein_coding | 4/4 | chr22 | TogoVar | |||||||
SHISAL1_chr22_44238665_44317951 | 44276524 | AGAGAAG | A | intron_variant | MODIFIER | HG00423.hp1 HG01069.hp1 HG01071.hp2 others(42): Show |
a0001 | a0001c0002a0001c0016a0001c0017others(36): Show | a0001c0002t0001a0001c0016t0001a0001c0017t0007others(38): Show | a0001c0002t0001g0006 a0001c0002t0001g0278 a0001c0016t0001g0081 others(40): Show |
45 | 380 | 0.1184 | -6 | c.599 others(23): Show |
SHISAL1 | ENSG00000138944.8 | transcript | ENST00000381176.5 | protein_coding | 4/4 | chr22 | TogoVar |