view | regionname | pos | ref | alt | annotation | impact | samples | ahapids | chapids | thapids | thapids | ac | an | af | len | hgvs_c | hgvs_p | genename | geneid | featuretype | featureid | transcript_biotype | rank | cdna cdna pos length
|
cds cds pos length
|
aa aa pos length
|
distance | status | chr | external |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
SNAPC3_chr9_15417876_15466626 | 15449559 | ATATATT | A | intron_variant | MODIFIER | HG02683.hp1 HG03017.hp2 HG03130.hp1 others(3): Show |
a0001a0005 | a0001c0001a0005c0007 | a0001c0001t0001a0001c0001t0004a0005c0007t0001 | a0001c0001t0001g0056 a0001c0001t0001g0072 a0001c0001t0001g0094 others(3): Show |
6 | 308 | 0.0195 | -6 | c.733 others(23): Show |
SNAPC3 | ENSG00000164975.16 | transcript | ENST00000380821.8 | protein_coding | 5/8 | INFO_REALIGN_3_PRIME | chr9 | TogoVar | ||||||
SNAPC3_chr9_15417876_15466626 | 15449561 | ATATTTT | A | intron_variant | MODIFIER | HG00639.hp1 HG01192.hp1 HG01192.hp2 others(4): Show |
a0001 | a0001c0001 | a0001c0001t0001a0001c0001t0011 | a0001c0001t0001g0023 a0001c0001t0001g0102 a0001c0001t0001g0127 others(4): Show |
7 | 308 | 0.0227 | -6 | c.733 others(23): Show |
SNAPC3 | ENSG00000164975.16 | transcript | ENST00000380821.8 | protein_coding | 5/8 | INFO_REALIGN_3_PRIME | chr9 | TogoVar | ||||||
SNAPC3_chr9_15417876_15466626 | 15463215 | CTTTTTT | C | downstream_gene_variant | MODIFIER | HG01069.hp2 HG01074.hp1 HG02109.hp2 others(11): Show |
a0001a0002 | a0001c0001a0002c0003 | a0001c0001t0005a0002c0003t0007 | a0001c0001t0005g0198 a0001c0001t0005g0199 a0001c0001t0005g0201 others(11): Show |
14 | 308 | 0.0455 | -6 | c.*33 others(17): Show |
SNAPC3 | ENSG00000164975.16 | transcript | ENST00000380821.8 | protein_coding | 1590 | chr9 | TogoVar | |||||||
SNAPIN_chr1_153653703_153666852 | 153663956 | TTACTAC | T | downstream_gene_variant | MODIFIER | HG01891.hp2 HG03130.hp2 HG03209.hp2 others(2): Show |
a0001 | a0001c0001 | a0001c0001t0001a0001c0001t0002a0001c0001t0005 | a0001c0001t0001g0001 a0001c0001t0002g0002 a0001c0001t0005g0018 others(1): Show |
5 | 400 | 0.0125 | -6 | c.*26 others(17): Show |
SNAPIN | ENSG00000143553.11 | transcript | ENST00000368685.6 | protein_coding | 2105 | chr1 | TogoVar | |||||||
SNCAIP_chr5_122307237_122469219 | 122318966 | CTTTTTT | C | intron_variant | MODIFIER | HG02257.hp2 HG02717.hp1 HG02965.hp2 others(4): Show |
a0001a0006 | a0001c0001a0001c0009a0006c0010 | a0001c0001t0003a0001c0009t0003a0006c0010t0007 | a0001c0001t0003g0062 a0001c0001t0003g0064 a0001c0001t0003g0065 others(4): Show |
7 | 222 | 0.0315 | -6 | c.-47 others(23): Show |
SNCAIP | ENSG00000064692.20 | transcript | ENST00000261368.13 | protein_coding | 1/10 | INFO_REALIGN_3_PRIME | chr5 | TogoVar | ||||||
SNCAIP_chr5_122307237_122469219 | 122351839 | ATGTCAG | A | intron_variant | MODIFIER | HG00735.hp2 HG01106.hp2 HG01433.hp1 others(8): Show |
a0001 | a0001c0001 | a0001c0001t0001 | a0001c0001t0001g0001 a0001c0001t0001g0005 a0001c0001t0001g0006 others(8): Show |
11 | 222 | 0.0496 | -6 | c.-46 others(25): Show |
SNCAIP | ENSG00000064692.20 | transcript | ENST00000261368.13 | protein_coding | 1/10 | chr5 | TogoVar | |||||||
SNCAIP_chr5_122307237_122469219 | 122358199 | GTGTGTA | G | intron_variant | MODIFIER | HG01123.hp2 HG01943.hp1 HG02040.hp2 others(1): Show |
a0001 | a0001c0001 | a0001c0001t0001a0001c0001t0002 | a0001c0001t0001g0001 a0001c0001t0001g0089 a0001c0001t0002g0044 others(1): Show |
4 | 222 | 0.0180 | -6 | c.-46 others(25): Show |
SNCAIP | ENSG00000064692.20 | transcript | ENST00000261368.13 | protein_coding | 1/10 | INFO_REALIGN_3_PRIME | chr5 | TogoVar | ||||||
SNCAIP_chr5_122307237_122469219 | 122385673 | ATGTGTG | A | intron_variant | MODIFIER | HG00735.hp2 HG01106.hp2 HG01243.hp1 others(8): Show |
a0001 | a0001c0001 | a0001c0001t0001 | a0001c0001t0001g0001 a0001c0001t0001g0005 a0001c0001t0001g0006 others(8): Show |
11 | 222 | 0.0496 | -6 | c.-46 others(23): Show |
SNCAIP | ENSG00000064692.20 | transcript | ENST00000261368.13 | protein_coding | 1/10 | INFO_REALIGN_3_PRIME | chr5 | TogoVar | ||||||
SNCAIP_chr5_122307237_122469219 | 122433112 | AGTGTGT | A | intron_variant | MODIFIER | HG03041.hp2 HG03471.hp2 NA18906.hp1 others(1): Show |
a0001a0006 | a0001c0001a0006c0010 | a0001c0001t0001a0001c0001t0002a0006c0010t0007 | a0001c0001t0001g0081 a0001c0001t0001g0084 a0001c0001t0002g0059 others(1): Show |
4 | 222 | 0.0180 | -6 | c.129 others(25): Show |
SNCAIP | ENSG00000064692.20 | transcript | ENST00000261368.13 | protein_coding | 6/10 | INFO_REALIGN_3_PRIME | chr5 | TogoVar | ||||||
SNCAIP_chr5_122307237_122469219 | 122445645 | TACACAC | T | intron_variant | MODIFIER | HG00408.hp1 HG01123.hp2 HG01175.hp2 others(23): Show |
a0001 | a0001c0001a0001c0006 | a0001c0001t0001a0001c0001t0002a0001c0006t0002 | a0001c0001t0001g0193 a0001c0001t0002g0019 a0001c0001t0002g0023 others(23): Show |
26 | 222 | 0.1171 | -6 | c.159 others(23): Show |
SNCAIP | ENSG00000064692.20 | transcript | ENST00000261368.13 | protein_coding | 8/10 | INFO_REALIGN_3_PRIME | chr5 | TogoVar | ||||||
SNCA_chr4_89719099_89842161 | 89749939 | GATATAT | G | intron_variant | MODIFIER | HG01109.hp2 HG01167.hp1 HG01169.hp2 others(20): Show |
a0001 | a0001c0001 | a0001c0001t0002a0001c0001t0005a0001c0001t0006others(8): Show | a0001c0001t0002g0287 a0001c0001t0002g0288 a0001c0001t0002g0289 others(19): Show |
23 | 338 | 0.0681 | -6 | c.307 others(25): Show |
SNCA | ENSG00000145335.17 | transcript | ENST00000394991.8 | protein_coding | 4/5 | chr4 | TogoVar | |||||||
SNCA_chr4_89719099_89842161 | 89752616 | CTTATTA | C | intron_variant | MODIFIER | HG01928.hp1 HG02602.hp1 HG02698.hp2 others(12): Show |
a0001 | a0001c0001 | a0001c0001t0002a0001c0001t0006a0001c0001t0021others(2): Show | a0001c0001t0002g0024 a0001c0001t0002g0025 a0001c0001t0002g0039 others(12): Show |
15 | 338 | 0.0444 | -6 | c.307 others(25): Show |
SNCA | ENSG00000145335.17 | transcript | ENST00000394991.8 | protein_coding | 4/5 | chr4 | TogoVar | |||||||
SNCA_chr4_89719099_89842161 | 89772664 | GGCTATT | G | intron_variant | MODIFIER | HG01167.hp2 HG02109.hp2 HG02809.hp1 others(2): Show |
a0001 | a0001c0001 | a0001c0001t0007a0001c0001t0023 | a0001c0001t0007g0134 a0001c0001t0007g0142 a0001c0001t0007g0143 others(2): Show |
5 | 338 | 0.0148 | -6 | c.307 others(25): Show |
SNCA | ENSG00000145335.17 | transcript | ENST00000394991.8 | protein_coding | 4/5 | chr4 | TogoVar | |||||||
SNCA_chr4_89719099_89842161 | 89789098 | CAGAAGA | C | intron_variant | MODIFIER | HG01243.hp2 HG02451.hp1 HG02895.hp2 others(1): Show |
a0001 | a0001c0001 | a0001c0001t0002a0001c0001t0012a0001c0001t0034 | a0001c0001t0002g0011 a0001c0001t0012g0284 a0001c0001t0034g0322 |
4 | 338 | 0.0118 | -6 | c.306 others(25): Show |
SNCA | ENSG00000145335.17 | transcript | ENST00000394991.8 | protein_coding | 4/5 | chr4 | TogoVar | |||||||
SNCA_chr4_89719099_89842161 | 89792291 | TTTGTTG | T | intron_variant | MODIFIER | HG00558.hp2 HG00597.hp2 HG00609.hp1 others(41): Show |
a0001 | a0001c0001 | a0001c0001t0001a0001c0001t0002a0001c0001t0003others(10): Show | a0001c0001t0001g0038 a0001c0001t0001g0088 a0001c0001t0001g0109 others(40): Show |
44 | 338 | 0.1302 | -6 | c.306 others(25): Show |
SNCA | ENSG00000145335.17 | transcript | ENST00000394991.8 | protein_coding | 4/5 | chr4 | TogoVar | |||||||
SNCA_chr4_89719099_89842161 | 89809495 | TACACAC | T | intron_variant | MODIFIER | HG01109.hp1 HG01167.hp2 HG01978.hp1 others(8): Show |
a0001 | a0001c0001 | a0001c0001t0005a0001c0001t0007a0001c0001t0023 | a0001c0001t0005g0003 a0001c0001t0005g0020 a0001c0001t0005g0021 others(7): Show |
11 | 338 | 0.0325 | -6 | c.306 others(25): Show |
SNCA | ENSG00000145335.17 | transcript | ENST00000394991.8 | protein_coding | 4/5 | chr4 | TogoVar | |||||||
SNCA_chr4_89719099_89842161 | 89811222 | ATATCAC | A | intron_variant | MODIFIER | HG00140.hp2 HG00280.hp2 HG00438.hp2 others(95): Show |
a0001 | a0001c0001 | a0001c0001t0001a0001c0001t0002a0001c0001t0003others(7): Show | a0001c0001t0001g0009 a0001c0001t0001g0019 a0001c0001t0001g0135 others(93): Show |
98 | 338 | 0.2899 | -6 | c.306 others(25): Show |
SNCA | ENSG00000145335.17 | transcript | ENST00000394991.8 | protein_coding | 4/5 | chr4 | TogoVar | |||||||
SNCG_chr10_86953599_86968258 | 86967150 | CGTGTGT | C | downstream_gene_variant | MODIFIER | HG00323.hp1 HG00558.hp2 HG00621.hp1 others(58): Show |
a0001a0002 | a0001c0001a0001c0003a0002c0002 | a0001c0001t0001a0001c0001t0002a0001c0001t0004others(5): Show | a0001c0001t0001g0001 a0001c0001t0001g0031 a0001c0001t0002g0003 others(11): Show |
61 | 400 | 0.1525 | -6 | c.*41 others(17): Show |
SNCG | ENSG00000173267.14 | transcript | ENST00000372017.4 | protein_coding | 3893 | chr10 | TogoVar | |||||||
SND1_chr7_127647194_128097593 | 127687935 | GCCTCGC | G | intron_variant | MODIFIER | HG02055.hp2 HG02451.hp1 HG03225.hp1 |
a0001 | a0001c0006 | a0001c0006t0001 | a0001c0006t0001g0098 a0001c0006t0001g0173 a0001c0006t0001g0174 |
3 | 262 | 0.0115 | -6 | c.228 others(23): Show |
SND1 | ENSG00000197157.11 | transcript | ENST00000354725.8 | protein_coding | 2/23 | INFO_REALIGN_3_PRIME | chr7 | TogoVar | ||||||
SND1_chr7_127647194_128097593 | 127705576 | TAGATGC | T | intron_variant | MODIFIER | HG00280.hp1 HG00323.hp2 HG00408.hp1 others(93): Show |
a0001a0002a0003 | a0001c0001a0001c0002a0001c0006others(3): Show | a0001c0001t0001a0001c0001t0002a0001c0001t0003others(8): Show | a0001c0001t0001g0029 a0001c0001t0001g0043 a0001c0001t0001g0044 others(93): Show |
96 | 262 | 0.3664 | -6 | c.947 others(21): Show |
SND1 | ENSG00000197157.11 | transcript | ENST00000354725.8 | protein_coding | 8/23 | INFO_REALIGN_3_PRIME | chr7 | TogoVar | ||||||
SND1_chr7_127647194_128097593 | 127707766 | AGTGTGT | A | intron_variant | MODIFIER | HG00408.hp2 HG01516.hp1 HG01517.hp1 others(7): Show |
a0001 | a0001c0001a0001c0002 | a0001c0001t0001a0001c0001t0003a0001c0002t0001 | a0001c0001t0001g0001 a0001c0001t0001g0002 a0001c0001t0001g0006 others(7): Show |
10 | 262 | 0.0382 | -6 | c.103 others(23): Show |
SND1 | ENSG00000197157.11 | transcript | ENST00000354725.8 | protein_coding | 9/23 | INFO_REALIGN_3_PRIME | chr7 | TogoVar | ||||||
SND1_chr7_127647194_128097593 | 127723674 | TTGTGAG | T | intron_variant | MODIFIER | HG02630.hp2 HG03516.hp1 |
a0001 | a0001c0001 | a0001c0001t0002 | a0001c0001t0002g0104 a0001c0001t0002g0105 |
2 | 262 | 0.0076 | -6 | c.115 others(25): Show |
SND1 | ENSG00000197157.11 | transcript | ENST00000354725.8 | protein_coding | 10/23 | INFO_REALIGN_3_PRIME | chr7 | TogoVar | ||||||
SND1_chr7_127647194_128097593 | 127751577 | ATAGCCT | A | intron_variant | MODIFIER | HG01884.hp1 HG01975.hp1 HG01993.hp1 |
a0001 | a0001c0002 | a0001c0002t0001 | a0001c0002t0001g0191 a0001c0002t0001g0237 a0001c0002t0001g0250 |
3 | 262 | 0.0115 | -6 | c.115 others(27): Show |
SND1 | ENSG00000197157.11 | transcript | ENST00000354725.8 | protein_coding | 10/23 | INFO_REALIGN_3_PRIME | chr7 | TogoVar | ||||||
SND1_chr7_127647194_128097593 | 127759691 | GTATATT | G | intron_variant | MODIFIER | HG00280.hp1 HG00408.hp1 HG00639.hp1 others(90): Show |
a0001a0002a0003 | a0001c0001a0001c0002a0001c0006others(4): Show | a0001c0001t0001a0001c0001t0002a0001c0001t0003others(9): Show | a0001c0001t0001g0029 a0001c0001t0001g0043 a0001c0001t0001g0044 others(90): Show |
93 | 262 | 0.3550 | -6 | c.115 others(27): Show |
SND1 | ENSG00000197157.11 | transcript | ENST00000354725.8 | protein_coding | 10/23 | INFO_REALIGN_3_PRIME | chr7 | TogoVar | ||||||
SND1_chr7_127647194_128097593 | 127872622 | ACACACG | A | intron_variant | MODIFIER | NA18612.hp2 NA18964.hp2 NA18980.hp1 others(4): Show |
a0001a0004 | a0001c0002a0004c0009 | a0001c0002t0001a0004c0009t0001 | a0001c0002t0001g0189 a0001c0002t0001g0202 a0001c0002t0001g0208 others(4): Show |
7 | 262 | 0.0267 | -6 | c.134 others(27): Show |
SND1 | ENSG00000197157.11 | transcript | ENST00000354725.8 | protein_coding | 12/23 | INFO_REALIGN_3_PRIME | chr7 | TogoVar | ||||||
SND1_chr7_127647194_128097593 | 127872628 | GCACACA | G | intron_variant | MODIFIER | HG00639.hp1 HG01069.hp2 HG01071.hp1 others(19): Show |
a0001 | a0001c0001a0001c0002a0001c0004 | a0001c0001t0001a0001c0001t0002a0001c0001t0003others(2): Show | a0001c0001t0001g0128 a0001c0001t0001g0175 a0001c0001t0001g0177 others(19): Show |
22 | 262 | 0.0840 | -6 | c.134 others(27): Show |
SND1 | ENSG00000197157.11 | transcript | ENST00000354725.8 | protein_coding | 12/23 | INFO_REALIGN_3_PRIME | chr7 | TogoVar | ||||||
SND1_chr7_127647194_128097593 | 127908318 | ATGTGTG | A | intron_variant | MODIFIER | HG00323.hp2 HG01243.hp2 HG01943.hp2 others(9): Show |
a0001 | a0001c0001a0001c0010 | a0001c0001t0001a0001c0001t0002a0001c0001t0003others(1): Show | a0001c0001t0001g0046 a0001c0001t0001g0099 a0001c0001t0001g0112 others(9): Show |
12 | 262 | 0.0458 | -6 | c.152 others(25): Show |
SND1 | ENSG00000197157.11 | transcript | ENST00000354725.8 | protein_coding | 14/23 | INFO_REALIGN_3_PRIME | chr7 | TogoVar | ||||||
SND1_chr7_127647194_128097593 | 127915996 | ATGTGTG | A | intron_variant | MODIFIER | HG00408.hp1 HG01069.hp1 HG01071.hp2 others(25): Show |
a0001 | a0001c0001a0001c0002 | a0001c0001t0001a0001c0001t0002a0001c0001t0003others(2): Show | a0001c0001t0001g0029 a0001c0001t0001g0043 a0001c0001t0001g0044 others(25): Show |
28 | 262 | 0.1069 | -6 | c.152 others(27): Show |
SND1 | ENSG00000197157.11 | transcript | ENST00000354725.8 | protein_coding | 14/23 | INFO_REALIGN_3_PRIME | chr7 | TogoVar | ||||||
SND1_chr7_127647194_128097593 | 127926720 | TTTGTTG | T | intron_variant | MODIFIER | HG00408.hp1 HG00639.hp1 HG01069.hp1 others(21): Show |
a0001 | a0001c0001 | a0001c0001t0001a0001c0001t0002a0001c0001t0003others(1): Show | a0001c0001t0001g0029 a0001c0001t0001g0043 a0001c0001t0001g0044 others(21): Show |
24 | 262 | 0.0916 | -6 | c.152 others(25): Show |
SND1 | ENSG00000197157.11 | transcript | ENST00000354725.8 | protein_coding | 14/23 | INFO_REALIGN_3_PRIME | chr7 | TogoVar | ||||||
SND1_chr7_127647194_128097593 | 127953151 | CGTGTGT | C | intron_variant | MODIFIER | HG00408.hp1 HG00408.hp2 HG01123.hp1 others(18): Show |
a0001a0002 | a0001c0001a0001c0002a0001c0006others(1): Show | a0001c0001t0001a0001c0001t0003a0001c0001t0006others(3): Show | a0001c0001t0001g0003 a0001c0001t0001g0009 a0001c0001t0001g0010 others(18): Show |
21 | 262 | 0.0802 | -6 | c.166 others(27): Show |
SND1 | ENSG00000197157.11 | transcript | ENST00000354725.8 | protein_coding | 15/23 | INFO_REALIGN_3_PRIME | chr7 | TogoVar | ||||||
SND1_chr7_127647194_128097593 | 127975424 | CGTGTGT | C | intron_variant | MODIFIER | HG00408.hp1 HG00423.hp1 HG00438.hp1 others(71): Show |
a0001a0002a0003 | a0001c0001a0001c0002a0001c0004others(3): Show | a0001c0001t0001a0001c0001t0002a0001c0001t0003others(7): Show | a0001c0001t0001g0004 a0001c0001t0001g0005 a0001c0001t0001g0007 others(71): Show |
74 | 262 | 0.2824 | -6 | c.167 others(27): Show |
SND1 | ENSG00000197157.11 | transcript | ENST00000354725.8 | protein_coding | 15/23 | INFO_REALIGN_3_PRIME | chr7 | TogoVar | ||||||
SND1_chr7_127647194_128097593 | 127994549 | CAAAAAA | C | intron_variant | MODIFIER | HG01496.hp2 HG02809.hp1 HG02922.hp1 others(4): Show |
a0001 | a0001c0001a0001c0004a0001c0010 | a0001c0001t0001a0001c0001t0003a0001c0004t0001others(1): Show | a0001c0001t0001g0002 a0001c0001t0001g0062 a0001c0001t0001g0078 others(4): Show |
7 | 262 | 0.0267 | -6 | c.177 others(25): Show |
SND1 | ENSG00000197157.11 | transcript | ENST00000354725.8 | protein_coding | 16/23 | INFO_REALIGN_3_PRIME | chr7 | TogoVar | ||||||
SND1_chr7_127647194_128097593 | 128043863 | TACACAC | T | intron_variant | MODIFIER | HG01123.hp2 HG01192.hp2 HG01243.hp2 others(30): Show |
a0001 | a0001c0001 | a0001c0001t0001a0001c0001t0002a0001c0001t0003 | a0001c0001t0001g0043 a0001c0001t0001g0056 a0001c0001t0001g0112 others(30): Show |
33 | 262 | 0.1260 | -6 | c.178 others(27): Show |
SND1 | ENSG00000197157.11 | transcript | ENST00000354725.8 | protein_coding | 16/23 | INFO_REALIGN_3_PRIME | chr7 | TogoVar | ||||||
SNED1_chr2_240993618_241100568 | 241005193 | CTGTTTT | C | intron_variant | MODIFIER | HG00609.hp1 HG00609.hp2 HG00621.hp1 others(54): Show |
a0001a0002a0003others(6): Show | a0001c0001a0001c0006a0001c0025others(16): Show | a0001c0001t0001a0001c0001t0002a0001c0001t0005others(32): Show | a0001c0001t0001g0295 a0001c0001t0002g0005 a0001c0001t0002g0252 others(54): Show |
57 | 344 | 0.1657 | -6 | c.213 others(23): Show |
SNED1 | ENSG00000162804.15 | transcript | ENST00000310397.13 | protein_coding | 1/31 | INFO_REALIGN_3_PRIME | chr2 | TogoVar | ||||||
SNED1_chr2_240993618_241100568 | 241047165 | AAAAAGT | A | intron_variant | MODIFIER | HG00438.hp1 HG00609.hp2 HG00621.hp2 others(52): Show |
a0001a0002a0003others(7): Show | a0001c0001a0001c0002a0001c0025others(16): Show | a0001c0001t0002a0001c0001t0005a0001c0001t0009others(31): Show | a0001c0001t0002g0252 a0001c0001t0002g0280 a0001c0001t0002g0297 others(52): Show |
55 | 344 | 0.1599 | -6 | c.127 others(25): Show |
SNED1 | ENSG00000162804.15 | transcript | ENST00000310397.13 | protein_coding | 8/31 | INFO_REALIGN_3_PRIME | chr2 | TogoVar | ||||||
SNED1_chr2_240993618_241100568 | 241057380 | AATATAT | A | intron_variant | MODIFIER | HG00423.hp2 HG00438.hp1 HG00597.hp1 others(112): Show |
a0001a0002a0003others(9): Show | a0001c0001a0001c0002a0001c0016others(33): Show | a0001c0001t0001a0001c0001t0005a0001c0001t0009others(66): Show | a0001c0001t0001g0141 a0001c0001t0005g0299 a0001c0001t0009g0278 others(112): Show |
115 | 344 | 0.3343 | -6 | c.225 others(25): Show |
SNED1 | ENSG00000162804.15 | transcript | ENST00000310397.13 | protein_coding | 16/31 | INFO_REALIGN_3_PRIME | chr2 | TogoVar | ||||||
SNED1_chr2_240993618_241100568 | 241096109 | GTCATCC | G | downstream_gene_variant | MODIFIER | HG02451.hp2 HG03453.hp2 HG03471.hp1 others(2): Show |
a0009 | a0009c0030a0009c0031a0009c0067 | a0009c0030t0027a0009c0031t0028a0009c0031t0036others(1): Show | a0009c0030t0027g0127 a0009c0030t0027g0208 a0009c0031t0028g0224 others(2): Show |
5 | 344 | 0.0145 | -6 | c.*44 others(17): Show |
SNED1 | ENSG00000162804.15 | transcript | ENST00000310397.13 | protein_coding | 542 | chr2 | TogoVar | |||||||
SNIP1_chr1_37529449_37559293 | 37551074 | GACACAC | G | intron_variant | MODIFIER | HG00280.hp1 HG00323.hp2 HG01257.hp1 others(6): Show |
a0001 | a0001c0001 | a0001c0001t0002a0001c0001t0007 | a0001c0001t0002g0028 a0001c0001t0007g0011 a0001c0001t0007g0253 others(2): Show |
9 | 394 | 0.0228 | -6 | c.327 others(23): Show |
SNIP1 | ENSG00000163877.11 | transcript | ENST00000296215.8 | protein_coding | 2/3 | chr1 | TogoVar | |||||||
SNORC_chr2_232865264_232883700 | 232883052 | AACACAC | A | downstream_gene_variant | MODIFIER | HG01243.hp2 HG01891.hp1 HG02109.hp1 others(15): Show |
a0001 | a0001c0001 | a0001c0001t0001a0001c0001t0003a0001c0001t0013others(1): Show | a0001c0001t0001g0008 a0001c0001t0001g0016 a0001c0001t0001g0030 others(3): Show |
18 | 452 | 0.0398 | -6 | c.*66 others(17): Show |
SNORC | ENSG00000182600.10 | transcript | ENST00000331342.5 | protein_coding | 4353 | chr2 | TogoVar | |||||||
SNPH_chr20_1261294_1314327 | 1289512 | TACACAC | T | intron_variant | MODIFIER | HG00140.hp2 HG00408.hp1 HG00438.hp2 others(133): Show |
a0001a0003a0004others(1): Show | a0001c0001a0001c0002a0001c0007others(4): Show | a0001c0001t0001a0001c0001t0002a0001c0001t0006others(17): Show | a0001c0001t0001g0239 a0001c0001t0002g0012 a0001c0001t0002g0041 others(125): Show |
136 | 350 | 0.3886 | -6 | c.-49 others(25): Show |
SNPH | ENSG00000101298.15 | transcript | ENST00000381867.6 | protein_coding | 2/6 | INFO_REALIGN_3_PRIME | chr20 | TogoVar | ||||||
SNPH_chr20_1261294_1314327 | 1298804 | TTGTGTG | T | intron_variant | MODIFIER | HG00597.hp1 HG01081.hp2 HG01109.hp1 others(30): Show |
a0001 | a0001c0001a0001c0002 | a0001c0001t0001a0001c0001t0002a0001c0001t0003others(4): Show | a0001c0001t0001g0060 a0001c0001t0001g0173 a0001c0001t0001g0174 others(27): Show |
33 | 350 | 0.0943 | -6 | c.290 others(23): Show |
SNPH | ENSG00000101298.15 | transcript | ENST00000381867.6 | protein_coding | 5/6 | INFO_REALIGN_3_PRIME | chr20 | TogoVar | ||||||
SNRK_chr3_43281540_43356143 | 43283899 | TCACACA | T | upstream_gene_variant | MODIFIER | HG01243.hp1 HG01346.hp1 HG02976.hp2 |
a0001 | a0001c0001 | a0001c0001t0001a0001c0001t0002 | a0001c0001t0001g0025 a0001c0001t0001g0214 a0001c0001t0002g0052 |
3 | 258 | 0.0116 | -6 | c.-29 others(17): Show |
SNRK | ENSG00000163788.14 | transcript | ENST00000296088.12 | protein_coding | 2640 | chr3 | TogoVar | |||||||
SNRK_chr3_43281540_43356143 | 43310181 | TTATTTA | T | intron_variant | MODIFIER | HG01167.hp1 HG01169.hp2 HG01891.hp2 others(12): Show |
a0001 | a0001c0002a0001c0011 | a0001c0002t0004a0001c0011t0021 | a0001c0002t0004g0011 a0001c0002t0004g0012 a0001c0002t0004g0013 others(9): Show |
15 | 258 | 0.0581 | -6 | c.589 others(23): Show |
SNRK | ENSG00000163788.14 | transcript | ENST00000296088.12 | protein_coding | 3/6 | INFO_REALIGN_3_PRIME | chr3 | TogoVar | ||||||
SNRK_chr3_43281540_43356143 | 43339818 | AATATAT | A | intron_variant | MODIFIER | HG00735.hp1 HG02004.hp2 HG02523.hp1 others(3): Show |
a0001 | a0001c0001a0001c0003 | a0001c0001t0001a0001c0001t0002a0001c0003t0005 | a0001c0001t0001g0103 a0001c0001t0001g0106 a0001c0001t0002g0089 others(3): Show |
6 | 258 | 0.0233 | -6 | c.732 others(21): Show |
SNRK | ENSG00000163788.14 | transcript | ENST00000296088.12 | protein_coding | 4/6 | INFO_REALIGN_3_PRIME | chr3 | TogoVar | ||||||
SNRNP27_chr2_69888956_69910236 | 69905844 | TTATACA | T | downstream_gene_variant | MODIFIER | HG00621.hp1 HG01243.hp1 HG01891.hp2 others(36): Show |
a0001 | a0001c0001 | a0001c0001t0003a0001c0001t0007a0001c0001t0010 | a0001c0001t0003g0004 a0001c0001t0003g0011 a0001c0001t0003g0027 others(8): Show |
39 | 440 | 0.0886 | -6 | c.*15 others(17): Show |
SNRNP27 | ENSG00000124380.11 | transcript | ENST00000244227.8 | protein_coding | 609 | chr2 | TogoVar | |||||||
SNRNP35_chr12_123453139_123471936 | 123456736 | CGTGTGT | C | upstream_gene_variant | MODIFIER | HG00099.hp2 HG00738.hp2 HG01069.hp1 others(25): Show |
a0001 | a0001c0001a0001c0002a0001c0003 | a0001c0001t0001a0001c0001t0002a0001c0001t0003others(3): Show | a0001c0001t0001g0001 a0001c0001t0001g0029 a0001c0001t0002g0005 others(19): Show |
28 | 186 | 0.1505 | -6 | c.-14 others(17): Show |
SNRNP35 | ENSG00000184209.15 | transcript | ENST00000526639.3 | protein_coding | 1402 | chr12 | TogoVar | |||||||
SNRNP48_chr6_7585198_7616967 | 7611759 | TTTTCTG | T | 3_prime_UTR_variant | MODIFIER | HG00733.hp2 HG00735.hp1 HG01099.hp2 others(33): Show |
a0001 | a0001c0004a0001c0005 | a0001c0004t0005a0001c0004t0007a0001c0004t0014others(6): Show | a0001c0004t0005g0019 a0001c0004t0005g0040 a0001c0004t0005g0041 others(13): Show |
36 | 426 | 0.0845 | -6 | c.*28 others(17): Show |
SNRNP48 | ENSG00000168566.13 | transcript | ENST00000342415.6 | protein_coding | 9/9 | 2892 | INFO_REALIGN_3_PRIME | chr6 | TogoVar | |||||
SNRNP70_chr19_49080451_49113604 | 49111422 | AAAACAC | A | downstream_gene_variant | MODIFIER | HG00099.hp1 HG00140.hp2 HG00558.hp1 others(33): Show |
a0001 | a0001c0001a0001c0002 | a0001c0001t0001a0001c0002t0001 | a0001c0001t0001g0058 a0001c0001t0001g0062 a0001c0001t0001g0074 others(23): Show |
36 | 366 | 0.0984 | -6 | c.*29 others(17): Show |
SNRNP70 | ENSG00000104852.15 | transcript | ENST00000598441.6 | protein_coding | 2819 | chr19 | TogoVar | |||||||
SNRPA1_chr15_101276510_101300248 | 101296655 | ATTTTTT | A | upstream_gene_variant | MODIFIER | HG00735.hp1 HG01884.hp2 HG02257.hp1 others(10): Show |
a0001a0004 | a0001c0001a0004c0008 | a0001c0001t0001a0004c0008t0001 | a0001c0001t0001g0016 a0001c0001t0001g0021 a0001c0001t0001g0061 others(7): Show |
13 | 442 | 0.0294 | -6 | c.-14 others(17): Show |
SNRPA1 | ENSG00000131876.18 | transcript | ENST00000254193.11 | protein_coding | 1408 | chr15 | TogoVar | |||||||
SNRPA1_chr15_101276510_101300248 | 101299183 | CAAAAAA | C | upstream_gene_variant | MODIFIER | HG00735.hp1 HG01099.hp1 HG01109.hp2 others(41): Show |
a0001 | a0001c0001a0001c0002a0001c0009 | a0001c0001t0001a0001c0002t0001a0001c0009t0001 | a0001c0001t0001g0023 a0001c0001t0001g0031 a0001c0001t0001g0039 others(26): Show |
44 | 442 | 0.0996 | -6 | c.-40 others(17): Show |
SNRPA1 | ENSG00000131876.18 | transcript | ENST00000254193.11 | protein_coding | 3936 | chr15 | TogoVar |