view | regionname | pos | ref | alt | annotation | impact | samples | ahapids | chapids | thapids | thapids | ac | an | af | len | hgvs_c | hgvs_p | genename | geneid | featuretype | featureid | transcript_biotype | rank | cdna cdna pos length
|
cds cds pos length
|
aa aa pos length
|
distance | status | chr | external |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
SNTG1_chr8_49906407_50801692 | 50763856 | AACACAC | A | intron_variant | MODIFIER | HG00280.hp1 HG01167.hp1 HG01167.hp2 others(13): Show |
a0001 | a0001c0001a0001c0002 | a0001c0001t0002a0001c0001t0003a0001c0001t0011others(8): Show | a0001c0001t0002g0010 a0001c0001t0002g0013 a0001c0001t0002g0015 others(13): Show |
16 | 106 | 0.1509 | -6 | c.139 others(27): Show |
SNTG1 | ENSG00000147481.17 | transcript | ENST00000642720.2 | protein_coding | 18/18 | INFO_REALIGN_3_PRIME | chr8 | TogoVar | ||||||
SNTG2_chr2_945849_1372613 | 955954 | TCCCTGC | T | intron_variant | MODIFIER | HG00323.hp1 HG00323.hp2 HG00438.hp1 others(12): Show |
a0001a0002a0003others(4): Show | a0001c0001a0001c0002a0002c0003others(6): Show | a0001c0001t0001a0001c0002t0001a0002c0003t0001others(6): Show | a0001c0001t0001g0090 a0001c0002t0001g0087 a0002c0003t0001g0091 others(12): Show |
15 | 190 | 0.0790 | -6 | c.72+ others(21): Show |
SNTG2 | ENSG00000172554.12 | transcript | ENST00000308624.10 | protein_coding | 1/16 | INFO_REALIGN_3_PRIME | chr2 | TogoVar | ||||||
SNTG2_chr2_945849_1372613 | 956030 | GGCCCCT | G | intron_variant | MODIFIER | HG00323.hp1 HG00323.hp2 HG00438.hp1 others(22): Show |
a0001a0002a0003others(5): Show | a0001c0001a0001c0002a0002c0003others(9): Show | a0001c0001t0001a0001c0002t0001a0002c0003t0001others(9): Show | a0001c0001t0001g0039 a0001c0001t0001g0090 a0001c0001t0001g0102 others(22): Show |
25 | 190 | 0.1316 | -6 | c.72+ others(21): Show |
SNTG2 | ENSG00000172554.12 | transcript | ENST00000308624.10 | protein_coding | 1/16 | INFO_REALIGN_3_PRIME | chr2 | TogoVar | ||||||
SNTG2_chr2_945849_1372613 | 956119 | CTGCCCA | C | intron_variant | MODIFIER | HG02109.hp2 HG02273.hp2 HG02451.hp1 others(11): Show |
a0001a0003a0004others(4): Show | a0001c0001a0001c0002a0003c0007others(7): Show | a0001c0001t0001a0001c0002t0001a0001c0002t0002others(9): Show | a0001c0001t0001g0187 a0001c0002t0001g0069 a0001c0002t0002g0002 others(11): Show |
14 | 190 | 0.0737 | -6 | c.72+ others(21): Show |
SNTG2 | ENSG00000172554.12 | transcript | ENST00000308624.10 | protein_coding | 1/16 | INFO_REALIGN_3_PRIME | chr2 | TogoVar | ||||||
SNTG2_chr2_945849_1372613 | 986067 | TAGAGAG | T | intron_variant | MODIFIER | HG00140.hp2 HG00735.hp2 HG01074.hp2 others(12): Show |
a0001a0002a0003others(5): Show | a0001c0001a0001c0002a0002c0003others(6): Show | a0001c0001t0001a0001c0002t0001a0002c0003t0001others(6): Show | a0001c0001t0001g0062 a0001c0001t0001g0140 a0001c0001t0001g0141 others(12): Show |
15 | 190 | 0.0790 | -6 | c.72+ others(23): Show |
SNTG2 | ENSG00000172554.12 | transcript | ENST00000308624.10 | protein_coding | 1/16 | INFO_REALIGN_3_PRIME | chr2 | TogoVar | ||||||
SNTG2_chr2_945849_1372613 | 996673 | GTTTTTT | G | intron_variant | MODIFIER | HG00099.hp1 HG00642.hp1 HG01074.hp1 others(42): Show |
a0001a0002a0003others(8): Show | a0001c0001a0001c0002a0002c0003others(15): Show | a0001c0001t0001a0001c0002t0001a0002c0003t0001others(17): Show | a0001c0001t0001g0015 a0001c0001t0001g0024 a0001c0001t0001g0025 others(42): Show |
45 | 190 | 0.2368 | -6 | c.72+ others(23): Show |
SNTG2 | ENSG00000172554.12 | transcript | ENST00000308624.10 | protein_coding | 1/16 | INFO_REALIGN_3_PRIME | chr2 | TogoVar | ||||||
SNTG2_chr2_945849_1372613 | 1072315 | ATTTTCT | A | intron_variant | MODIFIER | HG01192.hp2 HG01346.hp1 HG01975.hp2 others(30): Show |
a0001a0002a0003others(11): Show | a0001c0002a0002c0005a0003c0007others(12): Show | a0001c0002t0001a0002c0005t0001a0003c0007t0001others(13): Show | a0001c0002t0001g0007 a0001c0002t0001g0010 a0001c0002t0001g0022 others(30): Show |
33 | 190 | 0.1737 | -6 | c.73- others(23): Show |
SNTG2 | ENSG00000172554.12 | transcript | ENST00000308624.10 | protein_coding | 1/16 | INFO_REALIGN_3_PRIME | chr2 | TogoVar | ||||||
SNTG2_chr2_945849_1372613 | 1122722 | CAAAAAA | C | intron_variant | MODIFIER | HG01192.hp2 HG01346.hp1 HG01975.hp2 others(21): Show |
a0001a0002a0003others(8): Show | a0001c0002a0002c0005a0003c0007others(9): Show | a0001c0002t0001a0002c0005t0001a0003c0007t0001others(10): Show | a0001c0002t0001g0007 a0001c0002t0001g0010 a0001c0002t0001g0022 others(21): Show |
24 | 190 | 0.1263 | -6 | c.326 others(25): Show |
SNTG2 | ENSG00000172554.12 | transcript | ENST00000308624.10 | protein_coding | 4/16 | INFO_REALIGN_3_PRIME | chr2 | TogoVar | ||||||
SNTG2_chr2_945849_1372613 | 1139668 | TAAAAAC | T | intron_variant | MODIFIER | HG00438.hp2 HG00673.hp1 HG00673.hp2 others(24): Show |
a0001a0002a0003others(6): Show | a0001c0001a0001c0002a0002c0005others(13): Show | a0001c0001t0001a0001c0002t0001a0001c0002t0002others(14): Show | a0001c0001t0001g0035 a0001c0001t0001g0039 a0001c0002t0001g0084 others(24): Show |
27 | 190 | 0.1421 | -6 | c.411 others(23): Show |
SNTG2 | ENSG00000172554.12 | transcript | ENST00000308624.10 | protein_coding | 6/16 | INFO_REALIGN_3_PRIME | chr2 | TogoVar | ||||||
SNTG2_chr2_945849_1372613 | 1139826 | CAAAAAA | C | intron_variant | MODIFIER | HG00140.hp2 HG00323.hp2 HG00438.hp1 others(36): Show |
a0001a0002a0003others(8): Show | a0001c0001a0001c0002a0002c0003others(11): Show | a0001c0001t0001a0001c0002t0001a0001c0002t0004others(12): Show | a0001c0001t0001g0038 a0001c0001t0001g0056 a0001c0001t0001g0057 others(36): Show |
39 | 190 | 0.2053 | -6 | c.411 others(23): Show |
SNTG2 | ENSG00000172554.12 | transcript | ENST00000308624.10 | protein_coding | 6/16 | INFO_REALIGN_3_PRIME | chr2 | TogoVar | ||||||
SNTG2_chr2_945849_1372613 | 1159109 | TGTGTTC | T | intron_variant | MODIFIER | HG00323.hp2 HG00438.hp1 HG01169.hp2 others(34): Show |
a0001a0002a0003others(10): Show | a0001c0001a0001c0002a0002c0003others(15): Show | a0001c0001t0001a0001c0002t0001a0002c0003t0001others(15): Show | a0001c0001t0001g0125 a0001c0002t0001g0007 a0001c0002t0001g0010 others(34): Show |
37 | 190 | 0.1947 | -6 | c.412 others(23): Show |
SNTG2 | ENSG00000172554.12 | transcript | ENST00000308624.10 | protein_coding | 6/16 | INFO_REALIGN_3_PRIME | chr2 | TogoVar | ||||||
SNTG2_chr2_945849_1372613 | 1190495 | CTATATA | C | intron_variant | MODIFIER | HG00438.hp2 HG00673.hp1 HG00673.hp2 others(21): Show |
a0001a0002a0004others(3): Show | a0001c0001a0001c0002a0002c0003others(5): Show | a0001c0001t0001a0001c0002t0001a0001c0002t0002others(7): Show | a0001c0001t0001g0123 a0001c0001t0001g0124 a0001c0001t0001g0136 others(21): Show |
24 | 190 | 0.1263 | -6 | c.591 others(25): Show |
SNTG2 | ENSG00000172554.12 | transcript | ENST00000308624.10 | protein_coding | 8/16 | INFO_REALIGN_3_PRIME | chr2 | TogoVar | ||||||
SNTG2_chr2_945849_1372613 | 1221629 | CGGTGCT | C | intron_variant | MODIFIER | HG01261.hp1 HG02630.hp1 HG03209.hp1 |
a0003a0004 | a0003c0007a0004c0004 | a0003c0007t0001a0004c0004t0001 | a0003c0007t0001g0184 a0004c0004t0001g0180 a0004c0004t0001g0181 |
3 | 190 | 0.0158 | -6 | c.719 others(25): Show |
SNTG2 | ENSG00000172554.12 | transcript | ENST00000308624.10 | protein_coding | 9/16 | chr2 | TogoVar | |||||||
SNTG2_chr2_945849_1372613 | 1221747 | CTGTCTG | C | intron_variant | MODIFIER | HG02109.hp1 NA19043.hp2 |
a0007 | a0007c0016a0007c0017 | a0007c0016t0001a0007c0017t0001 | a0007c0016t0001g0033 a0007c0017t0001g0118 |
2 | 190 | 0.0105 | -6 | c.719 others(25): Show |
SNTG2 | ENSG00000172554.12 | transcript | ENST00000308624.10 | protein_coding | 9/16 | INFO_REALIGN_3_PRIME | chr2 | TogoVar | ||||||
SNTG2_chr2_945849_1372613 | 1221939 | CTGTCTG | C | intron_variant | MODIFIER | HG01496.hp1 HG02071.hp1 HG02738.hp2 |
a0002 | a0002c0003a0002c0005 | a0002c0003t0001a0002c0005t0001 | a0002c0003t0001g0026 a0002c0003t0001g0174 a0002c0005t0001g0107 |
3 | 190 | 0.0158 | -6 | c.719 others(25): Show |
SNTG2 | ENSG00000172554.12 | transcript | ENST00000308624.10 | protein_coding | 9/16 | INFO_REALIGN_3_PRIME | chr2 | TogoVar | ||||||
SNTG2_chr2_945849_1372613 | 1222025 | CTGCCTA | C | intron_variant | MODIFIER | HG00099.hp1 HG02735.hp1 HG02965.hp2 others(1): Show |
a0001a0002a0006 | a0001c0002a0002c0003a0002c0005others(1): Show | a0001c0002t0004a0002c0003t0001a0002c0005t0001others(1): Show | a0001c0002t0004g0053 a0002c0003t0001g0138 a0002c0005t0001g0168 others(1): Show |
4 | 190 | 0.0211 | -6 | c.719 others(25): Show |
SNTG2 | ENSG00000172554.12 | transcript | ENST00000308624.10 | protein_coding | 9/16 | INFO_REALIGN_3_PRIME | chr2 | TogoVar | ||||||
SNTG2_chr2_945849_1372613 | 1226818 | ATAAATC | A | intron_variant | MODIFIER | HG02451.hp2 HG02559.hp2 HG02965.hp1 others(3): Show |
a0001a0003a0005others(1): Show | a0001c0002a0003c0026a0005c0015others(1): Show | a0001c0002t0001a0001c0002t0002a0003c0026t0001others(2): Show | a0001c0002t0001g0069 a0001c0002t0001g0133 a0001c0002t0002g0002 others(3): Show |
6 | 190 | 0.0316 | -6 | c.720 others(25): Show |
SNTG2 | ENSG00000172554.12 | transcript | ENST00000308624.10 | protein_coding | 9/16 | INFO_REALIGN_3_PRIME | chr2 | TogoVar | ||||||
SNTG2_chr2_945849_1372613 | 1241470 | TTTTTTA | T | intron_variant | MODIFIER | HG00735.hp1 HG01099.hp1 HG01192.hp1 others(17): Show |
a0003a0005a0006others(4): Show | a0003c0007a0003c0008a0005c0006others(6): Show | a0003c0007t0001a0003c0008t0001a0005c0006t0001others(6): Show | a0003c0007t0001g0018 a0003c0007t0001g0068 a0003c0007t0001g0080 others(17): Show |
20 | 190 | 0.1053 | -6 | c.888 others(23): Show |
SNTG2 | ENSG00000172554.12 | transcript | ENST00000308624.10 | protein_coding | 11/16 | INFO_REALIGN_3_PRIME | chr2 | TogoVar | ||||||
SNTG2_chr2_945849_1372613 | 1264698 | ACATTCT | A | intron_variant | MODIFIER | HG00735.hp1 HG01099.hp1 HG01192.hp1 others(20): Show |
a0003a0005a0006others(5): Show | a0003c0007a0003c0008a0003c0026others(8): Show | a0003c0007t0001a0003c0008t0001a0003c0026t0001others(8): Show | a0003c0007t0001g0018 a0003c0007t0001g0068 a0003c0007t0001g0080 others(20): Show |
23 | 190 | 0.1211 | -6 | c.107 others(25): Show |
SNTG2 | ENSG00000172554.12 | transcript | ENST00000308624.10 | protein_coding | 13/16 | INFO_REALIGN_3_PRIME | chr2 | TogoVar | ||||||
SNTG2_chr2_945849_1372613 | 1291475 | TTTTAGC | T | intron_variant | MODIFIER | HG02280.hp2 HG02965.hp1 HG03486.hp1 others(1): Show |
a0001a0010 | a0001c0002a0010c0013 | a0001c0002t0001a0001c0002t0002a0010c0013t0001 | a0001c0002t0001g0069 a0001c0002t0001g0133 a0001c0002t0002g0002 others(1): Show |
4 | 190 | 0.0211 | -6 | c.128 others(27): Show |
SNTG2 | ENSG00000172554.12 | transcript | ENST00000308624.10 | protein_coding | 14/16 | INFO_REALIGN_3_PRIME | chr2 | TogoVar | ||||||
SNTG2_chr2_945849_1372613 | 1341846 | CTTTTTT | C | intron_variant | MODIFIER | HG01891.hp1 HG02559.hp2 HG02895.hp1 others(3): Show |
a0004a0005a0017 | a0004c0004a0005c0015a0017c0036 | a0004c0004t0001a0005c0015t0001a0017c0036t0001 | a0004c0004t0001g0047 a0004c0004t0001g0089 a0004c0004t0001g0116 others(3): Show |
6 | 190 | 0.0316 | -6 | c.148 others(27): Show |
SNTG2 | ENSG00000172554.12 | transcript | ENST00000308624.10 | protein_coding | 16/16 | INFO_REALIGN_3_PRIME | chr2 | TogoVar | ||||||
SNTG2_chr2_945849_1372613 | 1364737 | CAAAAAA | C | intron_variant | MODIFIER | HG00099.hp2 HG00438.hp1 HG00438.hp2 others(75): Show |
a0001a0002a0003others(12): Show | a0001c0001a0001c0002a0002c0003others(16): Show | a0001c0001t0001a0001c0001t0003a0001c0002t0001others(20): Show | a0001c0001t0001g0016 a0001c0001t0001g0024 a0001c0001t0001g0025 others(75): Show |
78 | 190 | 0.4105 | -6 | c.148 others(25): Show |
SNTG2 | ENSG00000172554.12 | transcript | ENST00000308624.10 | protein_coding | 16/16 | INFO_REALIGN_3_PRIME | chr2 | TogoVar | ||||||
SNTN_chr3_63647675_63670212 | 63658401 | AATATAT | A | intron_variant | MODIFIER | NA18945.hp1 NA18947.hp2 NA18952.hp1 others(9): Show |
a0001 | a0001c0001 | a0001c0001t0007 | a0001c0001t0007g0008 a0001c0001t0007g0039 |
12 | 450 | 0.0267 | -6 | c.146 others(23): Show |
SNTN | ENSG00000188817.8 | transcript | ENST00000343837.8 | protein_coding | 2/3 | INFO_REALIGN_3_PRIME | chr3 | TogoVar | ||||||
SNURF_chr15_24949987_24973821 | 24958486 | GTTTTTT | G | intron_variant | MODIFIER | HG00140.hp2 HG00609.hp2 HG00621.hp1 others(22): Show |
a0001 | a0001c0001 | a0001c0001t0001a0001c0001t0002 | a0001c0001t0001g0005 a0001c0001t0001g0032 a0001c0001t0001g0050 others(8): Show |
25 | 386 | 0.0648 | -6 | c.14+ others(21): Show |
SNURF | ENSG00000273173.6 | transcript | ENST00000577949.6 | protein_coding | 1/2 | INFO_REALIGN_3_PRIME | chr15 | TogoVar | ||||||
SNW1_chr14_77712599_77766156 | 77751843 | CACCACA | C | intron_variant | MODIFIER | HG00673.hp2 HG02165.hp2 HG02293.hp1 others(8): Show |
a0001 | a0001c0001 | a0001c0001t0001 | a0001c0001t0001g0165 a0001c0001t0001g0176 a0001c0001t0001g0177 others(8): Show |
11 | 366 | 0.0301 | -6 | c.169 others(21): Show |
SNW1 | ENSG00000100603.14 | transcript | ENST00000261531.12 | protein_coding | 2/13 | chr14 | TogoVar | |||||||
SNX10_chr7_26286862_26379383 | 26319287 | ATATACT | A | intron_variant | MODIFIER | HG00099.hp1 HG00140.hp2 HG00280.hp1 others(86): Show |
a0001 | a0001c0001 | a0001c0001t0001a0001c0001t0002a0001c0001t0003others(6): Show | a0001c0001t0001g0003 a0001c0001t0001g0007 a0001c0001t0001g0008 others(84): Show |
89 | 390 | 0.2282 | -6 | c.-23 others(25): Show |
SNX10 | ENSG00000086300.17 | transcript | ENST00000338523.9 | protein_coding | 1/6 | INFO_REALIGN_3_PRIME | chr7 | TogoVar | ||||||
SNX10_chr7_26286862_26379383 | 26325306 | AATATAT | A | intron_variant | MODIFIER | HG00438.hp2 HG00609.hp2 HG00642.hp1 others(77): Show |
a0001 | a0001c0001 | a0001c0001t0001a0001c0001t0002a0001c0001t0003others(11): Show | a0001c0001t0001g0226 a0001c0001t0001g0231 a0001c0001t0001g0234 others(76): Show |
80 | 390 | 0.2051 | -6 | c.-23 others(25): Show |
SNX10 | ENSG00000086300.17 | transcript | ENST00000338523.9 | protein_coding | 1/6 | INFO_REALIGN_3_PRIME | chr7 | TogoVar | ||||||
SNX10_chr7_26286862_26379383 | 26337226 | CTTTATT | C | intron_variant | MODIFIER | HG00099.hp1 HG00642.hp2 HG00735.hp2 others(43): Show |
a0001 | a0001c0001 | a0001c0001t0001a0001c0001t0004a0001c0001t0009others(2): Show | a0001c0001t0001g0003 a0001c0001t0001g0073 a0001c0001t0001g0074 others(42): Show |
46 | 390 | 0.1180 | -6 | c.-23 others(23): Show |
SNX10 | ENSG00000086300.17 | transcript | ENST00000338523.9 | protein_coding | 1/6 | INFO_REALIGN_3_PRIME | chr7 | TogoVar | ||||||
SNX10_chr7_26286862_26379383 | 26341976 | TTCTTTC | T | intron_variant | MODIFIER | HG00408.hp1 HG00438.hp1 HG00544.hp1 others(66): Show |
a0001a0002 | a0001c0001a0002c0002 | a0001c0001t0001a0001c0001t0003a0001c0001t0005others(15): Show | a0001c0001t0001g0006 a0001c0001t0001g0021 a0001c0001t0001g0166 others(66): Show |
69 | 390 | 0.1769 | -6 | c.-23 others(23): Show |
SNX10 | ENSG00000086300.17 | transcript | ENST00000338523.9 | protein_coding | 1/6 | INFO_REALIGN_3_PRIME | chr7 | TogoVar | ||||||
SNX10_chr7_26286862_26379383 | 26347949 | CTTTTTG | C | intron_variant | MODIFIER | HG00099.hp1 HG00408.hp1 HG00438.hp1 others(203): Show |
a0001a0002 | a0001c0001a0002c0002 | a0001c0001t0001a0001c0001t0002a0001c0001t0003others(28): Show | a0001c0001t0001g0003 a0001c0001t0001g0006 a0001c0001t0001g0009 others(201): Show |
206 | 390 | 0.5282 | -6 | c.24+ others(21): Show |
SNX10 | ENSG00000086300.17 | transcript | ENST00000338523.9 | protein_coding | 2/6 | INFO_REALIGN_3_PRIME | chr7 | TogoVar | ||||||
SNX10_chr7_26286862_26379383 | 26352110 | CTCTATA | C | intron_variant | MODIFIER | HG00642.hp2 HG00738.hp1 HG01106.hp2 others(50): Show |
a0001 | a0001c0001 | a0001c0001t0001a0001c0001t0004a0001c0001t0009others(5): Show | a0001c0001t0001g0003 a0001c0001t0001g0006 a0001c0001t0001g0009 others(49): Show |
53 | 390 | 0.1359 | -6 | c.24+ others(21): Show |
SNX10 | ENSG00000086300.17 | transcript | ENST00000338523.9 | protein_coding | 2/6 | INFO_REALIGN_3_PRIME | chr7 | TogoVar | ||||||
SNX10_chr7_26286862_26379383 | 26377018 | CTGTGTG | C | downstream_gene_variant | MODIFIER | HG01069.hp2 HG01071.hp1 HG01106.hp2 others(22): Show |
a0001 | a0001c0001 | a0001c0001t0001a0001c0001t0003a0001c0001t0004others(2): Show | a0001c0001t0001g0082 a0001c0001t0001g0084 a0001c0001t0001g0086 others(22): Show |
25 | 390 | 0.0641 | -6 | c.*44 others(17): Show |
SNX10 | ENSG00000086300.17 | transcript | ENST00000338523.9 | protein_coding | 2636 | chr7 | TogoVar | |||||||
SNX12_chrX_71054247_71073334 | 71062368 | CTTTTTT | C | intron_variant | MODIFIER | HG03486.hp2 | a0001 | a0001c0001 | a0001c0001t0001 | a0001c0001t0001g0058 | 1 | 309 | 0.0032 | -6 | c.262 others(21): Show |
SNX12 | ENSG00000147164.12 | transcript | ENST00000374274.8 | protein_coding | 2/3 | chrX | TogoVar | |||||||
SNX12_chrX_71054247_71073334 | 71073035 | TACACAC | T | upstream_gene_variant | MODIFIER | HG00609.hp1 HG00733.hp2 NA18978.hp1 others(1): Show |
a0001 | a0001c0001 | a0001c0001t0001a0001c0001t0002 | a0001c0001t0001g0037 a0001c0001t0002g0001 a0001c0001t0002g0009 |
4 | 309 | 0.0129 | -6 | c.-47 others(17): Show |
SNX12 | ENSG00000147164.12 | transcript | ENST00000374274.8 | protein_coding | 4702 | chrX | TogoVar | |||||||
SNX13_chr7_17785761_17945494 | 17786154 | TACACAC | T | downstream_gene_variant | MODIFIER | HG00140.hp1 HG00280.hp1 HG00280.hp2 others(202): Show |
a0001a0002a0003 | a0001c0001a0001c0002a0001c0003others(5): Show | a0001c0001t0001a0001c0001t0002a0001c0001t0004others(19): Show | a0001c0001t0001g0001 a0001c0001t0001g0009 a0001c0001t0001g0019 others(201): Show |
205 | 338 | 0.6065 | -6 | c.*78 others(17): Show |
SNX13 | ENSG00000071189.21 | transcript | ENST00000428135.7 | protein_coding | 4606 | chr7 | TogoVar | |||||||
SNX13_chr7_17785761_17945494 | 17801009 | CATATAT | C | intron_variant | MODIFIER | HG02622.hp1 HG02647.hp1 HG03471.hp1 others(1): Show |
a0001 | a0001c0001a0001c0002 | a0001c0001t0008a0001c0002t0017 | a0001c0001t0008g0006 a0001c0001t0008g0062 a0001c0001t0008g0236 others(1): Show |
4 | 338 | 0.0118 | -6 | c.229 others(23): Show |
SNX13 | ENSG00000071189.21 | transcript | ENST00000428135.7 | protein_coding | 22/25 | chr7 | TogoVar | |||||||
SNX13_chr7_17785761_17945494 | 17805250 | TGCGTGC | T | intron_variant | MODIFIER | HG02258.hp2 HG02922.hp1 HG03516.hp2 |
a0001 | a0001c0002 | a0001c0002t0023a0001c0002t0030a0001c0002t0032 | a0001c0002t0023g0057 a0001c0002t0030g0058 a0001c0002t0032g0337 |
3 | 338 | 0.0089 | -6 | c.206 others(25): Show |
SNX13 | ENSG00000071189.21 | transcript | ENST00000428135.7 | protein_coding | 20/25 | chr7 | TogoVar | |||||||
SNX13_chr7_17785761_17945494 | 17805261 | GCGCGCA | G | intron_variant | MODIFIER | HG02055.hp1 NA18998.hp2 NA19076.hp2 |
a0001 | a0001c0001a0001c0002 | a0001c0001t0012a0001c0002t0009 | a0001c0001t0012g0190 a0001c0002t0009g0330 a0001c0002t0009g0332 |
3 | 338 | 0.0089 | -6 | c.206 others(25): Show |
SNX13 | ENSG00000071189.21 | transcript | ENST00000428135.7 | protein_coding | 20/25 | chr7 | TogoVar | |||||||
SNX13_chr7_17785761_17945494 | 17861342 | TCACACA | T | intron_variant | MODIFIER | HG00323.hp2 HG00408.hp2 HG00558.hp1 others(83): Show |
a0001 | a0001c0001a0001c0002a0001c0003 | a0001c0001t0001a0001c0001t0005a0001c0001t0012others(12): Show | a0001c0001t0001g0130 a0001c0001t0001g0228 a0001c0001t0005g0199 others(83): Show |
86 | 338 | 0.2544 | -6 | c.837 others(23): Show |
SNX13 | ENSG00000071189.21 | transcript | ENST00000428135.7 | protein_coding | 9/25 | chr7 | TogoVar | |||||||
SNX15_chr11_65022439_65045572 | 65043615 | CAAAAAA | C | downstream_gene_variant | MODIFIER | HG00558.hp2 HG00621.hp2 HG00735.hp1 others(23): Show |
a0002 | a0002c0003 | a0002c0003t0003 | a0002c0003t0003g0004 a0002c0003t0003g0010 a0002c0003t0003g0056 others(9): Show |
26 | 338 | 0.0769 | -6 | c.*38 others(17): Show |
SNX15 | ENSG00000110025.13 | transcript | ENST00000377244.8 | protein_coding | 3044 | chr11 | TogoVar | |||||||
SNX16_chr8_81794583_81847185 | 81796365 | TACACAC | T | downstream_gene_variant | MODIFIER | HG01169.hp2 HG02809.hp1 NA18747.hp2 others(3): Show |
a0001a0004 | a0001c0001a0004c0006 | a0001c0001t0004a0001c0001t0006a0001c0001t0014others(1): Show | a0001c0001t0004g0117 a0001c0001t0004g0118 a0001c0001t0004g0128 others(3): Show |
6 | 306 | 0.0196 | -6 | c.*51 others(17): Show |
SNX16 | ENSG00000104497.15 | transcript | ENST00000345957.9 | protein_coding | 3217 | chr8 | TogoVar | |||||||
SNX16_chr8_81794583_81847185 | 81807518 | CAAAAAA | C | intron_variant | MODIFIER | HG00099.hp1 HG00280.hp2 HG00735.hp1 others(56): Show |
a0001 | a0001c0001 | a0001c0001t0001a0001c0001t0008a0001c0001t0009 | a0001c0001t0001g0001 a0001c0001t0001g0005 a0001c0001t0001g0008 others(30): Show |
59 | 306 | 0.1928 | -6 | c.682 others(23): Show |
SNX16 | ENSG00000104497.15 | transcript | ENST00000345957.9 | protein_coding | 5/7 | chr8 | TogoVar | |||||||
SNX16_chr8_81794583_81847185 | 81842468 | CAGAGAG | C | upstream_gene_variant | MODIFIER | HG00280.hp2 HG01975.hp1 HG02615.hp2 |
a0001 | a0001c0001 | a0001c0001t0001 | a0001c0001t0001g0005 a0001c0001t0001g0037 a0001c0001t0001g0043 |
3 | 306 | 0.0098 | -6 | c.-44 others(15): Show |
SNX16 | ENSG00000104497.15 | transcript | ENST00000345957.9 | protein_coding | 284 | chr8 | TogoVar | |||||||
SNX16_chr8_81794583_81847185 | 81842580 | GCGTCAC | G | upstream_gene_variant | MODIFIER | HG00280.hp1 HG00423.hp1 HG00423.hp2 others(47): Show |
a0001 | a0001c0001a0001c0002 | a0001c0001t0004a0001c0002t0003 | a0001c0001t0004g0006 a0001c0001t0004g0015 a0001c0001t0004g0027 others(38): Show |
50 | 306 | 0.1634 | -6 | c.-56 others(15): Show |
SNX16 | ENSG00000104497.15 | transcript | ENST00000345957.9 | protein_coding | 396 | chr8 | TogoVar | |||||||
SNX17_chr2_27365616_27382535 | 27366094 | CTGTGTG | C | upstream_gene_variant | MODIFIER | HG00639.hp1 HG01167.hp1 HG01169.hp2 others(7): Show |
a0001 | a0001c0001 | a0001c0001t0002 | a0001c0001t0002g0006 | 10 | 372 | 0.0269 | -6 | c.-46 others(17): Show |
SNX17 | ENSG00000115234.11 | transcript | ENST00000233575.7 | protein_coding | 4521 | chr2 | TogoVar | |||||||
SNX17_chr2_27365616_27382535 | 27366215 | GGTGTGT | G | upstream_gene_variant | MODIFIER | HG00738.hp1 HG00741.hp2 HG01109.hp1 others(31): Show |
a0001 | a0001c0001a0001c0002 | a0001c0001t0001a0001c0001t0002a0001c0001t0003others(2): Show | a0001c0001t0001g0001 a0001c0001t0001g0002 a0001c0001t0001g0016 others(7): Show |
34 | 372 | 0.0914 | -6 | c.-45 others(17): Show |
SNX17 | ENSG00000115234.11 | transcript | ENST00000233575.7 | protein_coding | 4400 | chr2 | TogoVar | |||||||
SNX19_chr11_130861250_130921479 | 130903716 | TACACAC | T | intron_variant | MODIFIER | HG00544.hp1 HG00642.hp2 HG02451.hp2 others(6): Show |
a0001a0005 | a0001c0001a0005c0004a0005c0017 | a0001c0001t0007a0001c0001t0046a0001c0001t0108others(2): Show | a0001c0001t0007g0150 a0001c0001t0007g0151 a0001c0001t0007g0152 others(5): Show |
9 | 414 | 0.0217 | -6 | c.244 others(23): Show |
SNX19 | ENSG00000120451.11 | transcript | ENST00000265909.9 | protein_coding | 7/10 | chr11 | TogoVar | |||||||
SNX1_chr15_64090982_64149231 | 64113839 | AAGAGAG | A | intron_variant | MODIFIER | HG02055.hp2 HG02809.hp1 HG03453.hp2 |
a0001 | a0001c0001 | a0001c0001t0038a0001c0001t0092a0001c0001t0093 | a0001c0001t0038g0010 a0001c0001t0092g0088 a0001c0001t0093g0010 |
3 | 270 | 0.0111 | -6 | c.271 others(23): Show |
SNX1 | ENSG00000028528.15 | transcript | ENST00000559844.6 | protein_coding | 2/14 | INFO_REALIGN_3_PRIME | chr15 | TogoVar | ||||||
SNX1_chr15_64090982_64149231 | 64124147 | CATATAT | C | intron_variant | MODIFIER | HG01346.hp2 HG01993.hp1 HG02293.hp1 |
a0001 | a0001c0001 | a0001c0001t0035a0001c0001t0054 | a0001c0001t0035g0118 a0001c0001t0035g0127 a0001c0001t0054g0146 |
3 | 270 | 0.0111 | -6 | c.510 others(21): Show |
SNX1 | ENSG00000028528.15 | transcript | ENST00000559844.6 | protein_coding | 5/14 | INFO_REALIGN_3_PRIME | chr15 | TogoVar | ||||||
SNX20_chr16_50666629_50686312 | 50672496 | CGTGTGT | C | 3_prime_UTR_variant | MODIFIER | HG01175.hp1 HG03490.hp2 NA20752.hp1 |
a0001 | a0001c0001 | a0001c0001t0029a0001c0001t0055 | a0001c0001t0029g0066 a0001c0001t0029g0165 a0001c0001t0055g0184 |
3 | 416 | 0.0072 | -6 | c.*90 others(15): Show |
SNX20 | ENSG00000167208.16 | transcript | ENST00000330943.9 | protein_coding | 4/4 | 904 | chr16 | TogoVar |