view | regionname | pos | ref | alt | annotation | impact | samples | ahapids | chapids | thapids | thapids | ac | an | af | len | hgvs_c | hgvs_p | genename | geneid | featuretype | featureid | transcript_biotype | rank | cdna cdna pos length
|
cds cds pos length
|
aa aa pos length
|
distance | status | chr | external |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
SNX2_chr5_122770080_122839543 | 122806142 | GCACACA | G | intron_variant | MODIFIER | HG00140.hp2 HG00438.hp2 HG00544.hp1 others(128): Show |
a0001a0003 | a0001c0001a0003c0003 | a0001c0001t0001a0001c0001t0005a0001c0001t0008others(16): Show | a0001c0001t0001g0002 a0001c0001t0001g0003 a0001c0001t0001g0004 others(126): Show |
131 | 372 | 0.3522 | -6 | c.644 others(23): Show |
SNX2 | ENSG00000205302.7 | transcript | ENST00000379516.7 | protein_coding | 6/14 | INFO_REALIGN_3_PRIME | chr5 | TogoVar | ||||||
SNX2_chr5_122770080_122839543 | 122823779 | CGTGTGT | C | intron_variant | MODIFIER | HG00140.hp1 HG00280.hp1 HG00280.hp2 others(102): Show |
a0001 | a0001c0001a0001c0002 | a0001c0001t0003a0001c0001t0004a0001c0001t0013others(22): Show | a0001c0001t0003g0080 a0001c0001t0003g0081 a0001c0001t0003g0141 others(100): Show |
105 | 372 | 0.2823 | -6 | c.121 others(25): Show |
SNX2 | ENSG00000205302.7 | transcript | ENST00000379516.7 | protein_coding | 11/14 | INFO_REALIGN_3_PRIME | chr5 | TogoVar | ||||||
SNX2_chr5_122770080_122839543 | 122829775 | TACACAC | T | 3_prime_UTR_variant | MODIFIER | HG00140.hp2 HG00438.hp2 HG00544.hp1 others(118): Show |
a0001a0003 | a0001c0001a0003c0003 | a0001c0001t0001a0001c0001t0005a0001c0001t0012others(11): Show | a0001c0001t0001g0002 a0001c0001t0001g0003 a0001c0001t0001g0004 others(116): Show |
121 | 372 | 0.3253 | -6 | c.*15 others(15): Show |
SNX2 | ENSG00000205302.7 | transcript | ENST00000379516.7 | protein_coding | 15/15 | 158 | INFO_REALIGN_3_PRIME | chr5 | TogoVar | |||||
SNX30_chr9_112745760_112879987 | 112775542 | TTGTGTG | T | intron_variant | MODIFIER | HG00280.hp2 HG00408.hp1 HG00609.hp1 others(54): Show |
a0001 | a0001c0001a0001c0002 | a0001c0001t0001a0001c0001t0002a0001c0001t0003others(6): Show | a0001c0001t0001g0083 a0001c0001t0001g0129 a0001c0001t0001g0130 others(54): Show |
57 | 338 | 0.1686 | -6 | c.156 others(25): Show |
SNX30 | ENSG00000148158.17 | transcript | ENST00000374232.8 | protein_coding | 1/8 | INFO_REALIGN_3_PRIME | chr9 | TogoVar | ||||||
SNX30_chr9_112745760_112879987 | 112777600 | ATTTTTT | A | intron_variant | MODIFIER | HG01168.hp2 HG01981.hp2 HG02280.hp2 others(6): Show |
a0001 | a0001c0001a0001c0002 | a0001c0001t0001a0001c0001t0003a0001c0001t0009others(2): Show | a0001c0001t0001g0136 a0001c0001t0001g0233 a0001c0001t0003g0273 others(6): Show |
9 | 338 | 0.0266 | -6 | c.156 others(25): Show |
SNX30 | ENSG00000148158.17 | transcript | ENST00000374232.8 | protein_coding | 1/8 | INFO_REALIGN_3_PRIME | chr9 | TogoVar | ||||||
SNX30_chr9_112745760_112879987 | 112807052 | CTTTTTT | C | intron_variant | MODIFIER | HG00140.hp1 HG00280.hp2 HG00408.hp1 others(144): Show |
a0001 | a0001c0001a0001c0002 | a0001c0001t0001a0001c0001t0002a0001c0001t0003others(26): Show | a0001c0001t0001g0083 a0001c0001t0001g0129 a0001c0001t0001g0130 others(144): Show |
147 | 338 | 0.4349 | -6 | c.348 others(23): Show |
SNX30 | ENSG00000148158.17 | transcript | ENST00000374232.8 | protein_coding | 2/8 | INFO_REALIGN_3_PRIME | chr9 | TogoVar | ||||||
SNX30_chr9_112745760_112879987 | 112832430 | AAGAGAG | A | intron_variant | MODIFIER | HG00099.hp1 HG00280.hp1 HG00323.hp1 others(17): Show |
a0001a0002 | a0001c0002a0002c0003a0002c0010 | a0001c0002t0025a0001c0002t0054a0002c0003t0002others(5): Show | a0001c0002t0025g0217 a0001c0002t0025g0218 a0001c0002t0054g0311 others(17): Show |
20 | 338 | 0.0592 | -6 | c.618 others(23): Show |
SNX30 | ENSG00000148158.17 | transcript | ENST00000374232.8 | protein_coding | 4/8 | INFO_REALIGN_3_PRIME | chr9 | TogoVar | ||||||
SNX30_chr9_112745760_112879987 | 112864999 | ACACACC | A | intron_variant | MODIFIER | NA18941.hp1 NA18955.hp1 NA19077.hp1 |
a0001 | a0001c0001 | a0001c0001t0010 | a0001c0001t0010g0065 a0001c0001t0010g0067 a0001c0001t0010g0195 |
3 | 338 | 0.0089 | -6 | c.125 others(23): Show |
SNX30 | ENSG00000148158.17 | transcript | ENST00000374232.8 | protein_coding | 8/8 | INFO_REALIGN_3_PRIME | chr9 | TogoVar | ||||||
SNX30_chr9_112745760_112879987 | 112865624 | CATATAT | C | intron_variant | MODIFIER | HG00280.hp2 HG00323.hp1 HG00609.hp2 others(58): Show |
a0001a0002 | a0001c0001a0001c0002a0001c0006others(1): Show | a0001c0001t0001a0001c0001t0002a0001c0001t0018others(5): Show | a0001c0001t0001g0132 a0001c0001t0001g0136 a0001c0001t0001g0138 others(58): Show |
61 | 338 | 0.1805 | -6 | c.125 others(25): Show |
SNX30 | ENSG00000148158.17 | transcript | ENST00000374232.8 | protein_coding | 8/8 | INFO_REALIGN_3_PRIME | chr9 | TogoVar | ||||||
SNX30_chr9_112745760_112879987 | 112865675 | GCACACA | G | intron_variant | MODIFIER | HG02040.hp2 HG04228.hp2 NA18941.hp1 others(3): Show |
a0001a0002 | a0001c0001a0002c0003 | a0001c0001t0010a0001c0001t0056a0002c0003t0010 | a0001c0001t0010g0065 a0001c0001t0010g0067 a0001c0001t0010g0195 others(3): Show |
6 | 338 | 0.0178 | -6 | c.125 others(25): Show |
SNX30 | ENSG00000148158.17 | transcript | ENST00000374232.8 | protein_coding | 8/8 | INFO_REALIGN_3_PRIME | chr9 | TogoVar | ||||||
SNX31_chr8_100567889_100654665 | 100581327 | ATCTATC | A | intron_variant | MODIFIER | HG00140.hp2 HG00558.hp2 HG00741.hp2 others(18): Show |
a0001a0002a0003others(4): Show | a0001c0001a0002c0002a0003c0003others(4): Show | a0001c0001t0001a0001c0001t0002a0002c0002t0002others(12): Show | a0001c0001t0001g0245 a0001c0001t0002g0066 a0001c0001t0002g0106 others(17): Show |
21 | 304 | 0.0691 | -6 | c.117 others(25): Show |
SNX31 | ENSG00000174226.9 | transcript | ENST00000311812.7 | protein_coding | 12/13 | chr8 | TogoVar | |||||||
SNX31_chr8_100567889_100654665 | 100628813 | GGTGTGT | G | intron_variant | MODIFIER | HG01099.hp1 HG01175.hp1 HG01261.hp1 others(1): Show |
a0003a0005 | a0003c0003a0005c0005 | a0003c0003t0002a0005c0005t0004 | a0003c0003t0002g0042 a0005c0005t0004g0005 a0005c0005t0004g0128 |
4 | 304 | 0.0132 | -6 | c.321 others(23): Show |
SNX31 | ENSG00000174226.9 | transcript | ENST00000311812.7 | protein_coding | 4/13 | chr8 | TogoVar | |||||||
SNX31_chr8_100567889_100654665 | 100641625 | CATATAT | C | intron_variant | MODIFIER | HG01069.hp2 HG01891.hp1 HG02280.hp1 others(3): Show |
a0002a0003a0004others(2): Show | a0002c0002a0003c0003a0004c0004others(2): Show | a0002c0002t0001a0003c0003t0001a0003c0003t0003others(3): Show | a0002c0002t0001g0274 a0003c0003t0001g0196 a0003c0003t0003g0177 others(3): Show |
6 | 304 | 0.0197 | -6 | c.142 others(23): Show |
SNX31 | ENSG00000174226.9 | transcript | ENST00000311812.7 | protein_coding | 2/13 | chr8 | TogoVar | |||||||
SNX3_chr6_108206222_108266040 | 108262565 | CTTTTTT | C | upstream_gene_variant | MODIFIER | HG02683.hp2 HG02717.hp1 HG02809.hp1 others(16): Show |
a0001 | a0001c0001 | a0001c0001t0001 | a0001c0001t0001g0011 a0001c0001t0001g0135 a0001c0001t0001g0318 others(15): Show |
19 | 356 | 0.0534 | -6 | c.-16 others(17): Show |
SNX3 | ENSG00000112335.15 | transcript | ENST00000230085.13 | protein_coding | 1526 | chr6 | TogoVar | |||||||
SNX4_chr3_125441650_125525202 | 125458814 | CAAAAAA | C | intron_variant | MODIFIER | HG00099.hp1 HG00140.hp2 HG00323.hp1 others(99): Show |
a0001 | a0001c0001 | a0001c0001t0001a0001c0001t0002a0001c0001t0003 | a0001c0001t0001g0001 a0001c0001t0001g0002 a0001c0001t0001g0015 others(97): Show |
102 | 360 | 0.2833 | -6 | c.945 others(23): Show |
SNX4 | ENSG00000114520.11 | transcript | ENST00000251775.9 | protein_coding | 10/13 | chr3 | TogoVar | |||||||
SNX4_chr3_125441650_125525202 | 125474314 | ATTTTTG | A | intron_variant | MODIFIER | HG01109.hp1 HG01109.hp2 NA19030.hp1 |
a0001 | a0001c0001 | a0001c0001t0001 | a0001c0001t0001g0192 a0001c0001t0001g0193 a0001c0001t0001g0194 |
3 | 360 | 0.0083 | -6 | c.788 others(23): Show |
SNX4 | ENSG00000114520.11 | transcript | ENST00000251775.9 | protein_coding | 8/13 | chr3 | TogoVar | |||||||
SNX5_chr20_17936600_17973794 | 17956673 | CAAAAAA | C | intron_variant | MODIFIER | HG00099.hp2 HG00280.hp2 HG00544.hp2 others(62): Show |
a0001a0002 | a0001c0001a0002c0004 | a0001c0001t0001a0001c0001t0002a0001c0001t0003others(5): Show | a0001c0001t0001g0002 a0001c0001t0001g0056 a0001c0001t0001g0057 others(45): Show |
65 | 394 | 0.1650 | -6 | c.156 others(21): Show |
SNX5 | ENSG00000089006.17 | transcript | ENST00000377759.9 | protein_coding | 2/12 | chr20 | TogoVar | |||||||
SNX5_chr20_17936600_17973794 | 17958021 | AAGAGAG | A | intron_variant | MODIFIER | HG01884.hp1 HG02055.hp1 HG02451.hp1 others(3): Show |
a0001 | a0001c0001 | a0001c0001t0004 | a0001c0001t0004g0026 a0001c0001t0004g0261 a0001c0001t0004g0262 others(1): Show |
6 | 394 | 0.0152 | -6 | c.52- others(19): Show |
SNX5 | ENSG00000089006.17 | transcript | ENST00000377759.9 | protein_coding | 1/12 | chr20 | TogoVar | |||||||
SNX6_chr14_34556093_34635148 | 34557496 | ATTCTTC | A | downstream_gene_variant | MODIFIER | HG02145.hp2 HG02615.hp1 HG02698.hp1 others(9): Show |
a0001 | a0001c0002 | a0001c0002t0002a0001c0002t0006 | a0001c0002t0002g0056 a0001c0002t0002g0057 a0001c0002t0002g0059 others(9): Show |
12 | 322 | 0.0373 | -6 | c.*56 others(17): Show |
SNX6 | ENSG00000129515.20 | transcript | ENST00000362031.10 | protein_coding | 3596 | chr14 | TogoVar | |||||||
SNX6_chr14_34556093_34635148 | 34558990 | TACACAC | T | downstream_gene_variant | MODIFIER | HG00099.hp1 HG00408.hp2 HG00544.hp2 others(47): Show |
a0001 | a0001c0001a0001c0002 | a0001c0001t0001a0001c0001t0002a0001c0001t0004others(3): Show | a0001c0001t0001g0003 a0001c0001t0001g0008 a0001c0001t0001g0137 others(47): Show |
50 | 322 | 0.1553 | -6 | c.*41 others(17): Show |
SNX6 | ENSG00000129515.20 | transcript | ENST00000362031.10 | protein_coding | 2102 | chr14 | TogoVar | |||||||
SNX6_chr14_34556093_34635148 | 34559034 | CACACAT | C | downstream_gene_variant | MODIFIER | HG00673.hp2 HG01070.hp1 HG01167.hp2 others(14): Show |
a0001 | a0001c0001a0001c0002a0001c0003 | a0001c0001t0002a0001c0001t0004a0001c0001t0005others(2): Show | a0001c0001t0002g0049 a0001c0001t0004g0013 a0001c0001t0004g0014 others(14): Show |
17 | 322 | 0.0528 | -6 | c.*40 others(17): Show |
SNX6 | ENSG00000129515.20 | transcript | ENST00000362031.10 | protein_coding | 2058 | chr14 | TogoVar | |||||||
SNX6_chr14_34556093_34635148 | 34560293 | ATTTTAT | A | downstream_gene_variant | MODIFIER | HG00423.hp2 HG00438.hp2 HG00544.hp1 others(66): Show |
a0001 | a0001c0001 | a0001c0001t0003a0001c0001t0004a0001c0001t0007others(7): Show | a0001c0001t0003g0083 a0001c0001t0003g0232 a0001c0001t0003g0269 others(65): Show |
69 | 322 | 0.2143 | -6 | c.*28 others(17): Show |
SNX6 | ENSG00000129515.20 | transcript | ENST00000362031.10 | protein_coding | 799 | chr14 | TogoVar | |||||||
SNX6_chr14_34556093_34635148 | 34576448 | ATATATT | A | intron_variant | MODIFIER | HG00099.hp2 HG00280.hp1 HG00408.hp1 others(135): Show |
a0001 | a0001c0001 | a0001c0001t0001a0001c0001t0002a0001c0001t0003others(7): Show | a0001c0001t0001g0003 a0001c0001t0001g0005 a0001c0001t0001g0006 others(134): Show |
138 | 322 | 0.4286 | -6 | c.835 others(21): Show |
SNX6 | ENSG00000129515.20 | transcript | ENST00000362031.10 | protein_coding | 10/13 | chr14 | TogoVar | |||||||
SNX6_chr14_34556093_34635148 | 34576450 | ATATTTT | A | intron_variant | MODIFIER | HG00438.hp2 HG00544.hp1 HG00558.hp2 others(50): Show |
a0001 | a0001c0001 | a0001c0001t0001a0001c0001t0003a0001c0001t0004others(7): Show | a0001c0001t0001g0009 a0001c0001t0001g0147 a0001c0001t0001g0150 others(50): Show |
53 | 322 | 0.1646 | -6 | c.835 others(21): Show |
SNX6 | ENSG00000129515.20 | transcript | ENST00000362031.10 | protein_coding | 10/13 | chr14 | TogoVar | |||||||
SNX6_chr14_34556093_34635148 | 34576452 | ATTTTTT | A | intron_variant | MODIFIER | HG01167.hp2 HG01243.hp1 HG01891.hp1 others(20): Show |
a0001 | a0001c0001a0001c0002 | a0001c0001t0004a0001c0002t0002 | a0001c0001t0004g0012 a0001c0001t0004g0013 a0001c0001t0004g0014 others(20): Show |
23 | 322 | 0.0714 | -6 | c.835 others(21): Show |
SNX6 | ENSG00000129515.20 | transcript | ENST00000362031.10 | protein_coding | 10/13 | chr14 | TogoVar | |||||||
SNX6_chr14_34556093_34635148 | 34587532 | CAAAAAA | C | intron_variant | MODIFIER | HG01243.hp1 HG02055.hp2 HG02572.hp1 others(9): Show |
a0001 | a0001c0001 | a0001c0001t0002a0001c0001t0004 | a0001c0001t0002g0087 a0001c0001t0002g0088 a0001c0001t0004g0014 others(9): Show |
12 | 322 | 0.0373 | -6 | c.719 others(23): Show |
SNX6 | ENSG00000129515.20 | transcript | ENST00000362031.10 | protein_coding | 8/13 | chr14 | TogoVar | |||||||
SNX6_chr14_34556093_34635148 | 34613041 | CAAAAAA | C | intron_variant | MODIFIER | HG00099.hp1 HG00280.hp2 HG00408.hp2 others(76): Show |
a0001 | a0001c0002a0001c0003 | a0001c0002t0001a0001c0002t0002a0001c0002t0006others(2): Show | a0001c0002t0001g0108 a0001c0002t0002g0001 a0001c0002t0002g0010 others(75): Show |
79 | 322 | 0.2453 | -6 | c.55- others(21): Show |
SNX6 | ENSG00000129515.20 | transcript | ENST00000362031.10 | protein_coding | 2/13 | chr14 | TogoVar | |||||||
SNX7_chr1_98656721_98765500 | 98663252 | GGTTTTT | G | intron_variant | MODIFIER | HG02717.hp1 HG02723.hp1 NA19067.hp1 others(1): Show |
a0001 | a0001c0001a0001c0002a0001c0004 | a0001c0001t0001a0001c0002t0001a0001c0004t0001 | a0001c0001t0001g0143 a0001c0001t0001g0144 a0001c0002t0001g0142 others(1): Show |
4 | 378 | 0.0106 | -6 | c.180 others(23): Show |
SNX7 | ENSG00000162627.17 | transcript | ENST00000306121.8 | protein_coding | 1/8 | chr1 | TogoVar | |||||||
SNX7_chr1_98656721_98765500 | 98677990 | CGTGTGT | C | intron_variant | MODIFIER | HG02258.hp1 HG02615.hp2 HG02622.hp1 others(7): Show |
a0001 | a0001c0001a0001c0004 | a0001c0001t0001a0001c0004t0001 | a0001c0001t0001g0011 a0001c0001t0001g0129 a0001c0004t0001g0004 others(6): Show |
10 | 378 | 0.0265 | -6 | c.181 others(23): Show |
SNX7 | ENSG00000162627.17 | transcript | ENST00000306121.8 | protein_coding | 1/8 | INFO_REALIGN_3_PRIME | chr1 | TogoVar | ||||||
SNX7_chr1_98656721_98765500 | 98691937 | ACTCTCT | A | intron_variant | MODIFIER | HG02717.hp2 HG02809.hp2 HG02896.hp2 others(3): Show |
a0001 | a0001c0004 | a0001c0004t0001 | a0001c0004t0001g0004 a0001c0004t0001g0114 a0001c0004t0001g0115 others(2): Show |
6 | 378 | 0.0159 | -6 | c.639 others(21): Show |
SNX7 | ENSG00000162627.17 | transcript | ENST00000306121.8 | protein_coding | 4/8 | INFO_REALIGN_3_PRIME | chr1 | TogoVar | ||||||
SNX8_chr7_2246770_2319441 | 2248547 | CTTTTTT | C | downstream_gene_variant | MODIFIER | HG00544.hp1 HG00639.hp2 HG00738.hp1 others(48): Show |
a0001a0002a0004 | a0001c0001a0001c0016a0002c0004others(1): Show | a0001c0001t0003a0001c0001t0011a0001c0001t0023others(7): Show | a0001c0001t0003g0037 a0001c0001t0003g0038 a0001c0001t0003g0066 others(48): Show |
51 | 370 | 0.1378 | -6 | c.*65 others(17): Show |
SNX8 | ENSG00000106266.11 | transcript | ENST00000222990.8 | protein_coding | 3222 | chr7 | TogoVar | |||||||
SNX8_chr7_2246770_2319441 | 2253919 | CCAGGGA | C | 3_prime_UTR_variant | MODIFIER | HG01192.hp2 HG02056.hp1 HG02738.hp2 others(12): Show |
a0001 | a0001c0001a0001c0015 | a0001c0001t0007a0001c0001t0025a0001c0001t0036others(1): Show | a0001c0001t0007g0019 a0001c0001t0007g0024 a0001c0001t0007g0025 others(12): Show |
15 | 370 | 0.0405 | -6 | c.*11 others(17): Show |
SNX8 | ENSG00000106266.11 | transcript | ENST00000222990.8 | protein_coding | 11/11 | 1131 | chr7 | TogoVar | ||||||
SNX8_chr7_2246770_2319441 | 2258184 | GTATTTC | G | intron_variant | MODIFIER | HG01109.hp1 HG02280.hp2 HG02622.hp1 others(1): Show |
a0001a0002 | a0001c0001a0002c0004 | a0001c0001t0005a0001c0001t0008a0002c0004t0008 | a0001c0001t0005g0011 a0001c0001t0005g0012 a0001c0001t0008g0270 others(1): Show |
4 | 370 | 0.0108 | -6 | c.916 others(21): Show |
SNX8 | ENSG00000106266.11 | transcript | ENST00000222990.8 | protein_coding | 7/10 | chr7 | TogoVar | |||||||
SNX8_chr7_2246770_2319441 | 2267305 | TCCCTCC | T | intron_variant | MODIFIER | HG00639.hp2 HG00735.hp2 HG01069.hp2 others(31): Show |
a0001a0002 | a0001c0001a0001c0002a0001c0003others(3): Show | a0001c0001t0001a0001c0001t0002a0001c0001t0003others(13): Show | a0001c0001t0001g0119 a0001c0001t0002g0153 a0001c0001t0003g0038 others(31): Show |
34 | 370 | 0.0919 | -6 | c.621 others(23): Show |
SNX8 | ENSG00000106266.11 | transcript | ENST00000222990.8 | protein_coding | 5/10 | chr7 | TogoVar | |||||||
SNX8_chr7_2246770_2319441 | 2317251 | CTTTTTT | C | upstream_gene_variant | MODIFIER | HG00280.hp2 HG00544.hp1 HG00621.hp1 others(39): Show |
a0001a0002 | a0001c0001a0001c0002a0001c0003others(1): Show | a0001c0001t0001a0001c0001t0002a0001c0001t0003others(12): Show | a0001c0001t0001g0051 a0001c0001t0001g0084 a0001c0001t0001g0120 others(39): Show |
42 | 370 | 0.1135 | -6 | c.-28 others(17): Show |
SNX8 | ENSG00000106266.11 | transcript | ENST00000222990.8 | protein_coding | 2811 | chr7 | TogoVar | |||||||
SNX9_chr6_157818246_157950077 | 157821030 | TAAAACA | T | upstream_gene_variant | MODIFIER | HG02055.hp2 HG02109.hp1 HG02145.hp1 others(6): Show |
a0001 | a0001c0001a0001c0003 | a0001c0001t0003a0001c0003t0003 | a0001c0001t0003g0250 a0001c0001t0003g0257 a0001c0003t0003g0251 others(6): Show |
9 | 302 | 0.0298 | -6 | c.-24 others(17): Show |
SNX9 | ENSG00000130340.17 | transcript | ENST00000392185.8 | protein_coding | 2215 | chr6 | TogoVar | |||||||
SNX9_chr6_157818246_157950077 | 157821032 | AAACAAC | A | upstream_gene_variant | MODIFIER | HG00099.hp2 HG00642.hp2 HG01074.hp1 others(36): Show |
a0001a0003 | a0001c0001a0001c0003a0003c0005 | a0001c0001t0001a0001c0001t0003a0001c0001t0004others(9): Show | a0001c0001t0001g0267 a0001c0001t0001g0280 a0001c0001t0003g0277 others(36): Show |
39 | 302 | 0.1291 | -6 | c.-24 others(17): Show |
SNX9 | ENSG00000130340.17 | transcript | ENST00000392185.8 | protein_coding | 2213 | chr6 | TogoVar | |||||||
SNX9_chr6_157818246_157950077 | 157826954 | AGTTTAT | A | intron_variant | MODIFIER | HG02055.hp2 HG02109.hp1 HG02145.hp1 others(13): Show |
a0001 | a0001c0001a0001c0003 | a0001c0001t0003a0001c0001t0004a0001c0001t0013others(3): Show | a0001c0001t0003g0250 a0001c0001t0003g0257 a0001c0001t0004g0063 others(13): Show |
16 | 302 | 0.0530 | -6 | c.12+ others(21): Show |
SNX9 | ENSG00000130340.17 | transcript | ENST00000392185.8 | protein_coding | 1/17 | chr6 | TogoVar | |||||||
SNX9_chr6_157818246_157950077 | 157834149 | GGTTTTT | G | intron_variant | MODIFIER | HG01081.hp2 HG01106.hp2 HG01175.hp2 others(8): Show |
a0001 | a0001c0001a0001c0003a0001c0009others(1): Show | a0001c0001t0001a0001c0001t0003a0001c0003t0003others(2): Show | a0001c0001t0001g0267 a0001c0001t0001g0280 a0001c0001t0003g0296 others(8): Show |
11 | 302 | 0.0364 | -6 | c.12+ others(23): Show |
SNX9 | ENSG00000130340.17 | transcript | ENST00000392185.8 | protein_coding | 1/17 | chr6 | TogoVar | |||||||
SNX9_chr6_157818246_157950077 | 157927930 | AACACAC | A | intron_variant | MODIFIER | HG03579.hp1 HG06807.hp1 NA19030.hp1 |
a0001 | a0001c0001 | a0001c0001t0011a0001c0001t0018 | a0001c0001t0011g0060 a0001c0001t0011g0259 a0001c0001t0018g0302 |
3 | 302 | 0.0099 | -6 | c.118 others(23): Show |
SNX9 | ENSG00000130340.17 | transcript | ENST00000392185.8 | protein_coding | 11/17 | INFO_REALIGN_3_PRIME | chr6 | TogoVar | ||||||
SNX9_chr6_157818246_157950077 | 157931556 | ACCTTAG | A | intron_variant | MODIFIER | HG00558.hp1 HG02135.hp2 NA19082.hp1 |
a0001 | a0001c0001 | a0001c0001t0001 | a0001c0001t0001g0084 a0001c0001t0001g0094 a0001c0001t0001g0099 |
3 | 302 | 0.0099 | -6 | c.128 others(23): Show |
SNX9 | ENSG00000130340.17 | transcript | ENST00000392185.8 | protein_coding | 12/17 | chr6 | TogoVar | |||||||
SNX9_chr6_157818246_157950077 | 157932866 | CAAAAAA | C | intron_variant | MODIFIER | HG00280.hp1 HG00408.hp2 HG00423.hp1 others(59): Show |
a0001a0002 | a0001c0003a0001c0009a0002c0002 | a0001c0003t0003a0001c0009t0006a0002c0002t0002others(2): Show | a0001c0003t0003g0258 a0001c0003t0003g0263 a0001c0003t0003g0264 others(59): Show |
62 | 302 | 0.2053 | -6 | c.136 others(23): Show |
SNX9 | ENSG00000130340.17 | transcript | ENST00000392185.8 | protein_coding | 13/17 | INFO_REALIGN_3_PRIME | chr6 | TogoVar | ||||||
SOAT1_chr1_179288797_179363680 | 179295966 | ATTTTTT | A | intron_variant | MODIFIER | HG00280.hp2 HG00621.hp2 HG01106.hp1 others(36): Show |
a0001a0002a0008 | a0001c0001a0001c0002a0001c0004others(5): Show | a0001c0001t0003a0001c0001t0005a0001c0001t0006others(11): Show | a0001c0001t0003g0085 a0001c0001t0003g0353 a0001c0001t0005g0010 others(35): Show |
39 | 382 | 0.1021 | -6 | c.-9+ others(21): Show |
SOAT1 | ENSG00000057252.13 | transcript | ENST00000367619.8 | protein_coding | 1/15 | INFO_REALIGN_3_PRIME | chr1 | TogoVar | ||||||
SOAT1_chr1_179288797_179363680 | 179299745 | CTTTTTT | C | intron_variant | MODIFIER | HG01070.hp1 HG01071.hp2 HG02055.hp1 others(6): Show |
a0001 | a0001c0001a0001c0004 | a0001c0001t0032a0001c0004t0011a0001c0004t0016others(3): Show | a0001c0001t0032g0331 a0001c0001t0032g0332 a0001c0004t0011g0232 others(6): Show |
9 | 382 | 0.0236 | -6 | c.-8- others(21): Show |
SOAT1 | ENSG00000057252.13 | transcript | ENST00000367619.8 | protein_coding | 1/15 | INFO_REALIGN_3_PRIME | chr1 | TogoVar | ||||||
SOAT1_chr1_179288797_179363680 | 179340820 | GATATAT | G | intron_variant | MODIFIER | HG01884.hp1 HG01891.hp2 HG02572.hp2 others(2): Show |
a0001 | a0001c0008a0001c0014a0001c0015 | a0001c0008t0012a0001c0014t0045a0001c0015t0050 | a0001c0008t0012g0250 a0001c0008t0012g0251 a0001c0008t0012g0252 others(2): Show |
5 | 382 | 0.0131 | -6 | c.498 others(21): Show |
SOAT1 | ENSG00000057252.13 | transcript | ENST00000367619.8 | protein_coding | 6/15 | INFO_REALIGN_3_PRIME | chr1 | TogoVar | ||||||
SOAT1_chr1_179288797_179363680 | 179344352 | GGTTTTT | G | intron_variant | MODIFIER | HG00741.hp2 HG01192.hp1 HG01358.hp1 others(3): Show |
a0001 | a0001c0001a0001c0002 | a0001c0001t0003a0001c0001t0019a0001c0002t0025 | a0001c0001t0003g0096 a0001c0001t0003g0121 a0001c0001t0003g0266 others(3): Show |
6 | 382 | 0.0157 | -6 | c.988 others(21): Show |
SOAT1 | ENSG00000057252.13 | transcript | ENST00000367619.8 | protein_coding | 10/15 | chr1 | TogoVar | |||||||
SOAT1_chr1_179288797_179363680 | 179348760 | ATGTGTG | A | intron_variant | MODIFIER | HG00738.hp2 HG00741.hp1 HG01070.hp1 others(10): Show |
a0001 | a0001c0001a0001c0004 | a0001c0001t0003a0001c0001t0005a0001c0001t0072others(4): Show | a0001c0001t0003g0109 a0001c0001t0003g0126 a0001c0001t0005g0025 others(10): Show |
13 | 382 | 0.0340 | -6 | c.121 others(21): Show |
SOAT1 | ENSG00000057252.13 | transcript | ENST00000367619.8 | protein_coding | 12/15 | INFO_REALIGN_3_PRIME | chr1 | TogoVar | ||||||
SOBP_chr6_107485117_107666306 | 107521909 | AACACAC | A | intron_variant | MODIFIER | HG01175.hp1 HG01346.hp2 HG02615.hp1 others(4): Show |
a0001a0002a0003 | a0001c0001a0002c0002a0003c0003 | a0001c0001t0004a0001c0001t0011a0001c0001t0016others(3): Show | a0001c0001t0004g0100 a0001c0001t0011g0296 a0001c0001t0016g0087 others(4): Show |
7 | 296 | 0.0237 | -6 | c.422 others(25): Show |
SOBP | ENSG00000112320.12 | transcript | ENST00000317357.10 | protein_coding | 3/6 | INFO_REALIGN_3_PRIME | chr6 | TogoVar | ||||||
SOBP_chr6_107485117_107666306 | 107532241 | TCACACA | T | intron_variant | MODIFIER | HG02280.hp2 HG03195.hp2 HG03225.hp2 others(1): Show |
a0001 | a0001c0001 | a0001c0001t0001a0001c0001t0003a0001c0001t0047 | a0001c0001t0001g0220 a0001c0001t0001g0260 a0001c0001t0003g0259 others(1): Show |
4 | 296 | 0.0135 | -6 | c.422 others(23): Show |
SOBP | ENSG00000112320.12 | transcript | ENST00000317357.10 | protein_coding | 3/6 | INFO_REALIGN_3_PRIME | chr6 | TogoVar | ||||||
SOBP_chr6_107485117_107666306 | 107535613 | TTGTGTG | T | intron_variant | MODIFIER | HG01243.hp2 HG02895.hp1 HG02970.hp2 others(1): Show |
a0001 | a0001c0001 | a0001c0001t0001a0001c0001t0033a0001c0001t0042 | a0001c0001t0001g0011 a0001c0001t0001g0012 a0001c0001t0033g0084 others(1): Show |
4 | 296 | 0.0135 | -6 | c.573 others(23): Show |
SOBP | ENSG00000112320.12 | transcript | ENST00000317357.10 | protein_coding | 4/6 | INFO_REALIGN_3_PRIME | chr6 | TogoVar |