view | regionname | pos | ref | alt | annotation | impact | samples | ahapids | chapids | thapids | thapids | ac | an | af | len | hgvs_c | hgvs_p | genename | geneid | featuretype | featureid | transcript_biotype | rank | cdna cdna pos length
|
cds cds pos length
|
aa aa pos length
|
distance | status | chr | external |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
SPOCK3_chr4_166728384_167239494 | 167210606 | GACTTTA | G | intron_variant | MODIFIER | HG02965.hp2 HG03579.hp2 |
a0001 | a0001c0002a0001c0004 | a0001c0002t0001a0001c0004t0003 | a0001c0002t0001g0010 a0001c0004t0003g0008 |
2 | 144 | 0.0139 | -6 | c.189 others(25): Show |
SPOCK3 | ENSG00000196104.11 | transcript | ENST00000357545.9 | protein_coding | 2/10 | chr4 | TogoVar | |||||||
SPOCK3_chr4_166728384_167239494 | 167235161 | TTGTGTG | T | upstream_gene_variant | MODIFIER | HG01109.hp1 HG01261.hp2 HG02280.hp2 others(3): Show |
a0001a0002 | a0001c0001a0001c0002a0002c0003 | a0001c0001t0001a0001c0001t0002a0001c0001t0003others(2): Show | a0001c0001t0001g0015 a0001c0001t0002g0014 a0001c0001t0002g0016 others(3): Show |
6 | 144 | 0.0417 | -6 | c.-71 others(15): Show |
SPOCK3 | ENSG00000196104.11 | transcript | ENST00000357545.9 | protein_coding | 668 | chr4 | TogoVar | |||||||
SPON1_chr11_13957723_14273133 | 13969215 | CAAAAAA | C | intron_variant | MODIFIER | HG01192.hp2 HG01884.hp1 HG02896.hp2 others(7): Show |
a0001a0002 | a0001c0001a0001c0002a0001c0008others(1): Show | a0001c0001t0001a0001c0001t0006a0001c0002t0001others(2): Show | a0001c0001t0001g0032 a0001c0001t0001g0043 a0001c0001t0006g0044 others(7): Show |
10 | 224 | 0.0446 | -6 | c.238 others(23): Show |
SPON1 | ENSG00000262655.4 | transcript | ENST00000576479.4 | protein_coding | 1/15 | INFO_REALIGN_3_PRIME | chr11 | TogoVar | ||||||
SPON1_chr11_13957723_14273133 | 13990373 | CTTTTTT | C | intron_variant | MODIFIER | HG02717.hp2 HG02897.hp1 HG03017.hp2 others(2): Show |
a0001 | a0001c0001a0001c0002a0001c0003 | a0001c0001t0001a0001c0002t0002a0001c0003t0001others(2): Show | a0001c0001t0001g0139 a0001c0002t0002g0035 a0001c0003t0001g0109 others(2): Show |
5 | 224 | 0.0223 | -6 | c.345 others(23): Show |
SPON1 | ENSG00000262655.4 | transcript | ENST00000576479.4 | protein_coding | 2/15 | INFO_REALIGN_3_PRIME | chr11 | TogoVar | ||||||
SPON1_chr11_13957723_14273133 | 14090823 | GGCCCCC | G | intron_variant | MODIFIER | HG00642.hp2 HG03688.hp2 NA19063.hp1 |
a0001 | a0001c0001 | a0001c0001t0003a0001c0001t0004 | a0001c0001t0003g0206 a0001c0001t0004g0178 a0001c0001t0004g0183 |
3 | 224 | 0.0134 | -6 | c.676 others(25): Show |
SPON1 | ENSG00000262655.4 | transcript | ENST00000576479.4 | protein_coding | 5/15 | chr11 | TogoVar | |||||||
SPON1_chr11_13957723_14273133 | 14160521 | TTACATA | T | intron_variant | MODIFIER | HG00280.hp1 HG00642.hp1 HG01074.hp1 others(72): Show |
a0001 | a0001c0001a0001c0002a0001c0003others(2): Show | a0001c0001t0001a0001c0001t0002a0001c0001t0003others(16): Show | a0001c0001t0001g0001 a0001c0001t0001g0013 a0001c0001t0001g0065 others(72): Show |
75 | 224 | 0.3348 | -6 | c.825 others(25): Show |
SPON1 | ENSG00000262655.4 | transcript | ENST00000576479.4 | protein_coding | 6/15 | INFO_REALIGN_3_PRIME | chr11 | TogoVar | ||||||
SPON1_chr11_13957723_14273133 | 14160845 | ATATATT | A | intron_variant | MODIFIER | HG03098.hp1 HG04199.hp1 |
a0001 | a0001c0004a0001c0008 | a0001c0004t0001a0001c0008t0002 | a0001c0004t0001g0106 a0001c0008t0002g0022 |
2 | 224 | 0.0089 | -6 | c.825 others(25): Show |
SPON1 | ENSG00000262655.4 | transcript | ENST00000576479.4 | protein_coding | 6/15 | INFO_REALIGN_3_PRIME | chr11 | TogoVar | ||||||
SPON1_chr11_13957723_14273133 | 14160969 | ATATTTT | A | intron_variant | MODIFIER | HG01243.hp1 HG02615.hp1 HG02809.hp2 |
a0001 | a0001c0002a0001c0004 | a0001c0002t0001a0001c0004t0001 | a0001c0002t0001g0169 a0001c0002t0001g0171 a0001c0004t0001g0107 |
3 | 224 | 0.0134 | -6 | c.825 others(25): Show |
SPON1 | ENSG00000262655.4 | transcript | ENST00000576479.4 | protein_coding | 6/15 | INFO_REALIGN_3_PRIME | chr11 | TogoVar | ||||||
SPON1_chr11_13957723_14273133 | 14229951 | CGTGTGT | C | intron_variant | MODIFIER | HG00323.hp1 HG00642.hp1 HG01106.hp2 others(13): Show |
a0001a0002 | a0001c0001a0001c0002a0001c0003others(3): Show | a0001c0001t0001a0001c0001t0003a0001c0001t0006others(6): Show | a0001c0001t0001g0141 a0001c0001t0003g0181 a0001c0001t0003g0206 others(13): Show |
16 | 224 | 0.0714 | -6 | c.826 others(25): Show |
SPON1 | ENSG00000262655.4 | transcript | ENST00000576479.4 | protein_coding | 6/15 | INFO_REALIGN_3_PRIME | chr11 | TogoVar | ||||||
SPON1_chr11_13957723_14273133 | 14235678 | CAAAAAA | C | intron_variant | MODIFIER | HG00280.hp1 HG00323.hp2 HG00408.hp1 others(61): Show |
a0001 | a0001c0001a0001c0002a0001c0003others(1): Show | a0001c0001t0001a0001c0001t0002a0001c0001t0003others(12): Show | a0001c0001t0001g0001 a0001c0001t0001g0062 a0001c0001t0001g0123 others(61): Show |
64 | 224 | 0.2857 | -6 | c.826 others(23): Show |
SPON1 | ENSG00000262655.4 | transcript | ENST00000576479.4 | protein_coding | 6/15 | INFO_REALIGN_3_PRIME | chr11 | TogoVar | ||||||
SPON1_chr11_13957723_14273133 | 14240589 | TTGTGTG | T | intron_variant | MODIFIER | HG00280.hp1 HG00323.hp2 HG00408.hp1 others(41): Show |
a0001 | a0001c0001a0001c0003a0001c0010 | a0001c0001t0001a0001c0001t0002a0001c0001t0003others(8): Show | a0001c0001t0001g0001 a0001c0001t0001g0005 a0001c0001t0001g0062 others(41): Show |
44 | 224 | 0.1964 | -6 | c.826 others(23): Show |
SPON1 | ENSG00000262655.4 | transcript | ENST00000576479.4 | protein_coding | 6/15 | INFO_REALIGN_3_PRIME | chr11 | TogoVar | ||||||
SPOPL_chr2_138496770_138578547 | 138529498 | CTGTGTG | C | intron_variant | MODIFIER | HG00323.hp1 HG00408.hp2 HG00738.hp2 others(8): Show |
a0001 | a0001c0001 | a0001c0001t0001a0001c0001t0003 | a0001c0001t0001g0008 a0001c0001t0001g0027 a0001c0001t0001g0213 others(7): Show |
11 | 372 | 0.0296 | -6 | c.-60 others(25): Show |
SPOPL | ENSG00000144228.9 | transcript | ENST00000280098.9 | protein_coding | 1/10 | INFO_REALIGN_3_PRIME | chr2 | TogoVar | ||||||
SPOPL_chr2_138496770_138578547 | 138555131 | GGTGTGT | G | intron_variant | MODIFIER | HG00280.hp2 HG00323.hp2 HG00735.hp1 others(38): Show |
a0001 | a0001c0001 | a0001c0001t0002a0001c0001t0004a0001c0001t0008others(4): Show | a0001c0001t0002g0313 a0001c0001t0002g0316 a0001c0001t0004g0006 others(36): Show |
41 | 372 | 0.1102 | -6 | c.480 others(23): Show |
SPOPL | ENSG00000144228.9 | transcript | ENST00000280098.9 | protein_coding | 5/10 | INFO_REALIGN_3_PRIME | chr2 | TogoVar | ||||||
SPOPL_chr2_138496770_138578547 | 138567372 | AGTGTGT | A | intron_variant | MODIFIER | HG00280.hp1 HG00738.hp2 HG01106.hp2 others(27): Show |
a0001 | a0001c0001 | a0001c0001t0001a0001c0001t0003a0001c0001t0004others(6): Show | a0001c0001t0001g0031 a0001c0001t0001g0037 a0001c0001t0001g0073 others(26): Show |
30 | 372 | 0.0807 | -6 | c.103 others(25): Show |
SPOPL | ENSG00000144228.9 | transcript | ENST00000280098.9 | protein_coding | 10/10 | INFO_REALIGN_3_PRIME | chr2 | TogoVar | ||||||
SPOP_chr17_49593884_49683097 | 49594207 | AAATAAT | A | downstream_gene_variant | MODIFIER | HG02280.hp2 HG02698.hp2 NA20752.hp2 |
a0001 | a0001c0001 | a0001c0001t0017 | a0001c0001t0017g0316 a0001c0001t0017g0328 a0001c0001t0017g0329 |
3 | 390 | 0.0077 | -6 | c.*61 others(17): Show |
SPOP | ENSG00000121067.19 | transcript | ENST00000504102.6 | protein_coding | 4676 | chr17 | TogoVar | |||||||
SPOP_chr17_49593884_49683097 | 49614802 | AGTGTGT | A | intron_variant | MODIFIER | HG00408.hp2 HG01256.hp2 HG01258.hp2 others(43): Show |
a0001 | a0001c0001 | a0001c0001t0001a0001c0001t0003a0001c0001t0004others(3): Show | a0001c0001t0001g0195 a0001c0001t0001g0210 a0001c0001t0001g0212 others(43): Show |
46 | 390 | 0.1180 | -6 | c.481 others(23): Show |
SPOP | ENSG00000121067.19 | transcript | ENST00000504102.6 | protein_coding | 5/9 | chr17 | TogoVar | |||||||
SPOP_chr17_49593884_49683097 | 49624331 | GCACACA | G | intron_variant | MODIFIER | HG00323.hp1 HG00639.hp1 HG00738.hp1 others(7): Show |
a0001 | a0001c0001 | a0001c0001t0001a0001c0001t0002a0001c0001t0003others(1): Show | a0001c0001t0001g0005 a0001c0001t0001g0373 a0001c0001t0001g0379 others(7): Show |
10 | 390 | 0.0256 | -6 | c.-66 others(23): Show |
SPOP | ENSG00000121067.19 | transcript | ENST00000504102.6 | protein_coding | 1/9 | chr17 | TogoVar | |||||||
SPOP_chr17_49593884_49683097 | 49665649 | GACACAC | G | intron_variant | MODIFIER | HG01106.hp2 HG01884.hp2 HG02145.hp1 others(17): Show |
a0001 | a0001c0001 | a0001c0001t0008a0001c0001t0015a0001c0001t0016others(3): Show | a0001c0001t0008g0004 a0001c0001t0008g0281 a0001c0001t0008g0283 others(16): Show |
20 | 390 | 0.0513 | -6 | c.-67 others(25): Show |
SPOP | ENSG00000121067.19 | transcript | ENST00000504102.6 | protein_coding | 1/9 | chr17 | TogoVar | |||||||
SPOP_chr17_49593884_49683097 | 49666448 | GACACAC | G | intron_variant | MODIFIER | HG00140.hp1 HG00558.hp1 HG00558.hp2 others(41): Show |
a0001 | a0001c0001 | a0001c0001t0001a0001c0001t0002a0001c0001t0003others(12): Show | a0001c0001t0001g0009 a0001c0001t0001g0200 a0001c0001t0001g0232 others(41): Show |
44 | 390 | 0.1128 | -6 | c.-67 others(25): Show |
SPOP | ENSG00000121067.19 | transcript | ENST00000504102.6 | protein_coding | 1/9 | chr17 | TogoVar | |||||||
SPOP_chr17_49593884_49683097 | 49680362 | TACACAC | T | upstream_gene_variant | MODIFIER | NA18977.hp1 NA19058.hp1 NA19070.hp1 |
a0001 | a0001c0001 | a0001c0001t0004 | a0001c0001t0004g0173 a0001c0001t0004g0174 a0001c0001t0004g0175 |
3 | 390 | 0.0077 | -6 | c.-25 others(17): Show |
SPOP | ENSG00000121067.19 | transcript | ENST00000504102.6 | protein_coding | 2266 | chr17 | TogoVar | |||||||
SPOUT1_chr9_128814651_128834794 | 128824295 | TGTGTGC | T | intron_variant | MODIFIER | HG02109.hp2 HG02647.hp1 HG02895.hp2 others(4): Show |
a0003 | a0003c0003 | a0003c0003t0004a0003c0003t0014 | a0003c0003t0004g0012 a0003c0003t0014g0030 |
7 | 410 | 0.0171 | -6 | c.812 others(21): Show |
SPOUT1 | ENSG00000198917.13 | transcript | ENST00000361256.10 | protein_coding | 9/11 | chr9 | TogoVar | |||||||
SPOUT1_chr9_128814651_128834794 | 128830632 | CTTTTTT | C | upstream_gene_variant | MODIFIER | HG01109.hp2 HG02723.hp2 HG02896.hp1 others(15): Show |
a0002a0004 | a0002c0002a0004c0004 | a0002c0002t0002a0002c0002t0006a0002c0002t0019others(5): Show | a0002c0002t0002g0002 a0002c0002t0002g0052 a0002c0002t0006g0008 others(6): Show |
18 | 410 | 0.0439 | -6 | c.-85 others(15): Show |
SPOUT1 | ENSG00000198917.13 | transcript | ENST00000361256.10 | protein_coding | 839 | chr9 | TogoVar | |||||||
SPP2_chr2_234045702_234082134 | 234067777 | CAAAAAA | C | intron_variant | MODIFIER | HG00099.hp1 HG00140.hp1 HG00280.hp2 others(94): Show |
a0001a0002 | a0001c0001a0001c0002a0002c0003 | a0001c0001t0001a0001c0002t0001a0001c0002t0002others(1): Show | a0001c0001t0001g0005 a0001c0001t0001g0007 a0001c0001t0001g0009 others(43): Show |
97 | 434 | 0.2235 | -6 | c.550 others(21): Show |
SPP2 | ENSG00000072080.11 | transcript | ENST00000168148.8 | protein_coding | 6/7 | INFO_REALIGN_3_PRIME | chr2 | TogoVar | ||||||
SPP2_chr2_234045702_234082134 | 234079572 | TTATATA | T | downstream_gene_variant | MODIFIER | HG00099.hp2 HG00140.hp2 HG00423.hp2 others(129): Show |
a0001a0005 | a0001c0001a0001c0002a0005c0008 | a0001c0001t0001a0001c0001t0006a0001c0002t0001others(1): Show | a0001c0001t0001g0003 a0001c0001t0001g0017 a0001c0001t0001g0018 others(54): Show |
132 | 434 | 0.3042 | -6 | c.*27 others(17): Show |
SPP2 | ENSG00000072080.11 | transcript | ENST00000168148.8 | protein_coding | 2439 | chr2 | TogoVar | |||||||
SPPL2A_chr15_50697266_50770706 | 50706724 | CTTAACA | C | 3_prime_UTR_variant | MODIFIER | HG02922.hp1 NA18906.hp1 NA20129.hp2 |
a0001 | a0001c0001 | a0001c0001t0032a0001c0001t0118 | a0001c0001t0032g0236 a0001c0001t0032g0237 a0001c0001t0118g0235 |
3 | 336 | 0.0089 | -6 | c.*10 others(17): Show |
SPPL2A | ENSG00000138600.11 | transcript | ENST00000261854.10 | protein_coding | 15/15 | 1070 | chr15 | TogoVar | ||||||
SPPL2A_chr15_50697266_50770706 | 50736511 | CTTAAAT | C | intron_variant | MODIFIER | HG01891.hp1 HG02818.hp2 HG02922.hp2 |
a0001 | a0001c0001 | a0001c0001t0023a0001c0001t0048 | a0001c0001t0023g0009 a0001c0001t0023g0010 a0001c0001t0048g0248 |
3 | 336 | 0.0089 | -6 | c.830 others(21): Show |
SPPL2A | ENSG00000138600.11 | transcript | ENST00000261854.10 | protein_coding | 7/14 | chr15 | TogoVar | |||||||
SPPL2B_chr19_2323684_2360095 | 2336893 | CTGTGGG | C | intron_variant | MODIFIER | HG00544.hp2 HG00733.hp2 HG00738.hp1 others(30): Show |
a0001a0002 | a0001c0001a0001c0015a0002c0029 | a0001c0001t0002a0001c0015t0028a0002c0029t0027 | a0001c0001t0002g0019 a0001c0001t0002g0044 a0001c0001t0002g0045 others(25): Show |
33 | 414 | 0.0797 | -6 | c.187 others(21): Show |
SPPL2B | ENSG00000005206.17 | transcript | ENST00000613503.5 | protein_coding | 2/14 | INFO_REALIGN_3_PRIME | chr19 | TogoVar | ||||||
SPPL2B_chr19_2323684_2360095 | 2348937 | CTCCACA | C | intron_variant | MODIFIER | HG02486.hp2 HG02723.hp2 HG03453.hp2 others(1): Show |
a0001a0002 | a0001c0001a0002c0005 | a0001c0001t0001a0002c0005t0003 | a0001c0001t0001g0024 a0002c0005t0003g0051 a0002c0005t0003g0162 |
4 | 414 | 0.0097 | -6 | c.135 others(25): Show |
SPPL2B | ENSG00000005206.17 | transcript | ENST00000613503.5 | protein_coding | 13/14 | chr19 | TogoVar | |||||||
SPPL3_chr12_120757510_120909358 | 120766098 | GCGCACA | G | intron_variant | MODIFIER | HG01109.hp1 HG01168.hp2 HG01169.hp2 others(8): Show |
a0001 | a0001c0001a0001c0002 | a0001c0001t0007a0001c0001t0012a0001c0001t0016others(1): Show | a0001c0001t0007g0195 a0001c0001t0007g0196 a0001c0001t0007g0199 others(8): Show |
11 | 320 | 0.0344 | -6 | c.108 others(23): Show |
SPPL3 | ENSG00000157837.16 | transcript | ENST00000353487.7 | protein_coding | 10/10 | chr12 | TogoVar | |||||||
SPPL3_chr12_120757510_120909358 | 120766100 | GCACACA | G | intron_variant | MODIFIER | HG01943.hp2 HG02083.hp2 HG02922.hp1 others(1): Show |
a0001 | a0001c0001a0001c0004 | a0001c0001t0004a0001c0001t0024a0001c0004t0009 | a0001c0001t0004g0122 a0001c0001t0004g0158 a0001c0001t0024g0146 others(1): Show |
4 | 320 | 0.0125 | -6 | c.108 others(23): Show |
SPPL3 | ENSG00000157837.16 | transcript | ENST00000353487.7 | protein_coding | 10/10 | chr12 | TogoVar | |||||||
SPPL3_chr12_120757510_120909358 | 120781555 | GTTTTTT | G | intron_variant | MODIFIER | HG00738.hp1 HG00738.hp2 HG01069.hp1 others(10): Show |
a0001 | a0001c0001a0001c0003 | a0001c0001t0004a0001c0001t0009a0001c0003t0009 | a0001c0001t0004g0170 a0001c0001t0004g0171 a0001c0001t0004g0177 others(10): Show |
13 | 320 | 0.0406 | -6 | c.502 others(23): Show |
SPPL3 | ENSG00000157837.16 | transcript | ENST00000353487.7 | protein_coding | 6/10 | chr12 | TogoVar | |||||||
SPPL3_chr12_120757510_120909358 | 120819842 | CCTGGTG | C | intron_variant | MODIFIER | HG01168.hp2 HG01169.hp2 HG01884.hp2 others(6): Show |
a0001 | a0001c0001 | a0001c0001t0012a0001c0001t0016a0001c0001t0020others(1): Show | a0001c0001t0012g0129 a0001c0001t0012g0130 a0001c0001t0012g0131 others(6): Show |
9 | 320 | 0.0281 | -6 | c.24- others(21): Show |
SPPL3 | ENSG00000157837.16 | transcript | ENST00000353487.7 | protein_coding | 1/10 | chr12 | TogoVar | |||||||
SPPL3_chr12_120757510_120909358 | 120827328 | CAATAAT | C | intron_variant | MODIFIER | HG00099.hp2 HG00280.hp2 HG00323.hp1 others(235): Show |
a0001 | a0001c0001a0001c0002 | a0001c0001t0001a0001c0001t0002a0001c0001t0003others(27): Show | a0001c0001t0001g0001 a0001c0001t0001g0221 a0001c0001t0001g0222 others(234): Show |
238 | 320 | 0.7438 | -6 | c.24- others(23): Show |
SPPL3 | ENSG00000157837.16 | transcript | ENST00000353487.7 | protein_coding | 1/10 | chr12 | TogoVar | |||||||
SPPL3_chr12_120757510_120909358 | 120833766 | AGTGTGT | A | intron_variant | MODIFIER | HG00423.hp2 HG00438.hp1 HG00639.hp2 others(68): Show |
a0001 | a0001c0001a0001c0002a0001c0003others(1): Show | a0001c0001t0001a0001c0001t0002a0001c0001t0003others(13): Show | a0001c0001t0001g0225 a0001c0001t0001g0229 a0001c0001t0001g0236 others(68): Show |
71 | 320 | 0.2219 | -6 | c.24- others(23): Show |
SPPL3 | ENSG00000157837.16 | transcript | ENST00000353487.7 | protein_coding | 1/10 | chr12 | TogoVar | |||||||
SPPL3_chr12_120757510_120909358 | 120853983 | TACACAC | T | intron_variant | MODIFIER | HG00438.hp1 HG01069.hp2 HG01981.hp2 others(18): Show |
a0001 | a0001c0001a0001c0002 | a0001c0001t0001a0001c0001t0002a0001c0001t0003others(5): Show | a0001c0001t0001g0233 a0001c0001t0001g0270 a0001c0001t0002g0029 others(18): Show |
21 | 320 | 0.0656 | -6 | c.24- others(23): Show |
SPPL3 | ENSG00000157837.16 | transcript | ENST00000353487.7 | protein_coding | 1/10 | chr12 | TogoVar | |||||||
SPPL3_chr12_120757510_120909358 | 120876808 | TACACAC | T | intron_variant | MODIFIER | HG00099.hp1 HG00280.hp1 HG00323.hp2 others(47): Show |
a0001 | a0001c0001 | a0001c0001t0003a0001c0001t0004a0001c0001t0007others(5): Show | a0001c0001t0003g0275 a0001c0001t0003g0276 a0001c0001t0003g0315 others(47): Show |
50 | 320 | 0.1563 | -6 | c.23+ others(23): Show |
SPPL3 | ENSG00000157837.16 | transcript | ENST00000353487.7 | protein_coding | 1/10 | chr12 | TogoVar | |||||||
SPPL3_chr12_120757510_120909358 | 120877355 | CATTCTA | C | intron_variant | MODIFIER | HG00639.hp1 HG01074.hp2 HG01943.hp2 others(8): Show |
a0001 | a0001c0001 | a0001c0001t0010a0001c0001t0014a0001c0001t0024 | a0001c0001t0010g0006 a0001c0001t0010g0007 a0001c0001t0010g0008 others(8): Show |
11 | 320 | 0.0344 | -6 | c.23+ others(23): Show |
SPPL3 | ENSG00000157837.16 | transcript | ENST00000353487.7 | protein_coding | 1/10 | chr12 | TogoVar | |||||||
SPRED1_chr15_38247836_38362249 | 38251521 | TCTCACA | T | upstream_gene_variant | MODIFIER | HG01952.hp1 HG01975.hp2 NA18949.hp1 others(4): Show |
a0001 | a0001c0001 | a0001c0001t0005a0001c0001t0030 | a0001c0001t0005g0185 a0001c0001t0005g0186 a0001c0001t0005g0196 others(4): Show |
7 | 378 | 0.0185 | -6 | c.-16 others(17): Show |
SPRED1 | ENSG00000166068.13 | transcript | ENST00000299084.9 | protein_coding | 1314 | chr15 | TogoVar | |||||||
SPRED1_chr15_38247836_38362249 | 38251697 | AACACAC | A | upstream_gene_variant | MODIFIER | HG00280.hp1 HG00558.hp2 HG00733.hp2 others(63): Show |
a0001 | a0001c0001a0001c0002 | a0001c0001t0001a0001c0001t0002a0001c0001t0004others(17): Show | a0001c0001t0001g0008 a0001c0001t0001g0097 a0001c0001t0001g0113 others(63): Show |
66 | 378 | 0.1746 | -6 | c.-14 others(17): Show |
SPRED1 | ENSG00000166068.13 | transcript | ENST00000299084.9 | protein_coding | 1138 | chr15 | TogoVar | |||||||
SPRED1_chr15_38247836_38362249 | 38273520 | AATATAT | A | intron_variant | MODIFIER | HG00642.hp1 HG01123.hp2 HG01243.hp2 others(7): Show |
a0001 | a0001c0002 | a0001c0002t0003a0001c0002t0006a0001c0002t0014others(1): Show | a0001c0002t0003g0071 a0001c0002t0003g0085 a0001c0002t0006g0020 others(7): Show |
10 | 378 | 0.0265 | -6 | c.32+ others(23): Show |
SPRED1 | ENSG00000166068.13 | transcript | ENST00000299084.9 | protein_coding | 1/6 | INFO_REALIGN_3_PRIME | chr15 | TogoVar | ||||||
SPRED1_chr15_38247836_38362249 | 38282339 | ACACATG | A | intron_variant | MODIFIER | HG00140.hp1 HG00140.hp2 HG00280.hp1 others(161): Show |
a0001 | a0001c0001 | a0001c0001t0001a0001c0001t0004a0001c0001t0005others(12): Show | a0001c0001t0001g0005 a0001c0001t0001g0007 a0001c0001t0001g0008 others(157): Show |
164 | 378 | 0.4339 | -6 | c.33- others(23): Show |
SPRED1 | ENSG00000166068.13 | transcript | ENST00000299084.9 | protein_coding | 1/6 | INFO_REALIGN_3_PRIME | chr15 | TogoVar | ||||||
SPRED1_chr15_38247836_38362249 | 38347461 | CTTTTTT | C | intron_variant | MODIFIER | HG03710.hp1 HG03834.hp2 NA18993.hp1 others(3): Show |
a0001 | a0001c0001 | a0001c0001t0001a0001c0001t0002a0001c0001t0022 | a0001c0001t0001g0107 a0001c0001t0001g0127 a0001c0001t0002g0278 others(3): Show |
6 | 378 | 0.0159 | -6 | c.583 others(23): Show |
SPRED1 | ENSG00000166068.13 | transcript | ENST00000299084.9 | protein_coding | 5/6 | INFO_REALIGN_3_PRIME | chr15 | TogoVar | ||||||
SPRED1_chr15_38247836_38362249 | 38358242 | CCTTCTA | C | downstream_gene_variant | MODIFIER | HG00738.hp2 HG01167.hp2 HG03710.hp1 others(2): Show |
a0001 | a0001c0001 | a0001c0001t0002a0001c0001t0037 | a0001c0001t0002g0236 a0001c0001t0002g0294 a0001c0001t0002g0300 others(2): Show |
5 | 378 | 0.0132 | -6 | c.*65 others(17): Show |
SPRED1 | ENSG00000166068.13 | transcript | ENST00000299084.9 | protein_coding | 994 | chr15 | TogoVar | |||||||
SPRED2_chr2_65305851_65437599 | 65310458 | TACACAC | T | downstream_gene_variant | MODIFIER | HG00323.hp1 HG00408.hp1 HG00423.hp2 others(40): Show |
a0001 | a0001c0001a0001c0002a0001c0004 | a0001c0001t0002a0001c0001t0003a0001c0001t0009others(5): Show | a0001c0001t0002g0002 a0001c0001t0002g0003 a0001c0001t0002g0005 others(40): Show |
43 | 276 | 0.1558 | -6 | c.*30 others(17): Show |
SPRED2 | ENSG00000198369.10 | transcript | ENST00000356388.9 | protein_coding | 392 | chr2 | TogoVar | |||||||
SPRED2_chr2_65305851_65437599 | 65317513 | AAACAAC | A | intron_variant | MODIFIER | HG00423.hp1 HG00438.hp1 HG00741.hp2 others(44): Show |
a0001 | a0001c0001a0001c0002a0001c0003 | a0001c0001t0002a0001c0001t0003a0001c0001t0008others(4): Show | a0001c0001t0002g0007 a0001c0001t0002g0009 a0001c0001t0002g0028 others(44): Show |
47 | 276 | 0.1703 | -6 | c.439 others(21): Show |
SPRED2 | ENSG00000198369.10 | transcript | ENST00000356388.9 | protein_coding | 4/5 | chr2 | TogoVar | |||||||
SPRED2_chr2_65305851_65437599 | 65317555 | CAACAAA | C | intron_variant | MODIFIER | HG00323.hp1 HG00323.hp2 HG00423.hp2 others(42): Show |
a0001 | a0001c0001a0001c0004a0001c0006 | a0001c0001t0002a0001c0001t0003a0001c0001t0004others(6): Show | a0001c0001t0002g0002 a0001c0001t0002g0003 a0001c0001t0002g0005 others(42): Show |
45 | 276 | 0.1630 | -6 | c.439 others(21): Show |
SPRED2 | ENSG00000198369.10 | transcript | ENST00000356388.9 | protein_coding | 4/5 | chr2 | TogoVar | |||||||
SPRED2_chr2_65305851_65437599 | 65322229 | CCTCTCT | C | intron_variant | MODIFIER | HG00140.hp2 HG00323.hp2 HG00408.hp1 others(48): Show |
a0001 | a0001c0001a0001c0002a0001c0003 | a0001c0001t0002a0001c0001t0003a0001c0001t0023others(6): Show | a0001c0001t0002g0078 a0001c0001t0002g0080 a0001c0001t0003g0205 others(48): Show |
51 | 276 | 0.1848 | -6 | c.439 others(23): Show |
SPRED2 | ENSG00000198369.10 | transcript | ENST00000356388.9 | protein_coding | 4/5 | chr2 | TogoVar | |||||||
SPRED2_chr2_65305851_65437599 | 65322266 | CTCTCTA | C | intron_variant | MODIFIER | HG00438.hp2 HG00558.hp1 HG01074.hp2 others(20): Show |
a0001 | a0001c0001a0001c0002 | a0001c0001t0002a0001c0001t0003a0001c0001t0008others(4): Show | a0001c0001t0002g0079 a0001c0001t0003g0227 a0001c0001t0008g0197 others(20): Show |
23 | 276 | 0.0833 | -6 | c.439 others(23): Show |
SPRED2 | ENSG00000198369.10 | transcript | ENST00000356388.9 | protein_coding | 4/5 | chr2 | TogoVar | |||||||
SPRED2_chr2_65305851_65437599 | 65338177 | GTCTCCC | G | intron_variant | MODIFIER | HG00140.hp1 HG00323.hp2 HG00733.hp1 others(13): Show |
a0001 | a0001c0001 | a0001c0001t0002a0001c0001t0003a0001c0001t0005others(2): Show | a0001c0001t0002g0085 a0001c0001t0003g0203 a0001c0001t0003g0212 others(13): Show |
16 | 276 | 0.0580 | -6 | c.205 others(23): Show |
SPRED2 | ENSG00000198369.10 | transcript | ENST00000356388.9 | protein_coding | 2/5 | chr2 | TogoVar | |||||||
SPRED2_chr2_65305851_65437599 | 65338266 | GTCTCCC | G | intron_variant | MODIFIER | HG00609.hp2 HG01167.hp2 HG01891.hp2 others(26): Show |
a0001 | a0001c0001a0001c0002 | a0001c0001t0002a0001c0001t0003a0001c0001t0005others(5): Show | a0001c0001t0002g0078 a0001c0001t0002g0079 a0001c0001t0002g0080 others(26): Show |
29 | 276 | 0.1051 | -6 | c.205 others(23): Show |
SPRED2 | ENSG00000198369.10 | transcript | ENST00000356388.9 | protein_coding | 2/5 | chr2 | TogoVar |