view | regionname | pos | ref | alt | annotation | impact | samples | ahapids | chapids | thapids | thapids | ac | an | af | len | hgvs_c | hgvs_p | genename | geneid | featuretype | featureid | transcript_biotype | rank | cdna cdna pos length
|
cds cds pos length
|
aa aa pos length
|
distance | status | chr | external |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
SYT1_chr12_78859774_79457008 | 79178982 | ATATATC | A | intron_variant | MODIFIER | HG02559.hp1 NA20300.hp2 |
a0001 | a0001c0001 | a0001c0001t0006 | a0001c0001t0006g0001 | 2 | 62 | 0.0323 | -6 | c.-17 others(25): Show |
SYT1 | ENSG00000067715.15 | transcript | ENST00000261205.9 | protein_coding | 3/10 | INFO_REALIGN_3_PRIME | chr12 | TogoVar | ||||||
SYT1_chr12_78859774_79457008 | 79179029 | TATATAG | T | intron_variant | MODIFIER | HG00621.hp1 HG00741.hp1 HG00741.hp2 others(17): Show |
a0001 | a0001c0001 | a0001c0001t0001a0001c0001t0002a0001c0001t0003others(8): Show | a0001c0001t0001g0022 a0001c0001t0001g0031 a0001c0001t0001g0039 others(17): Show |
20 | 62 | 0.3226 | -6 | c.-17 others(25): Show |
SYT1 | ENSG00000067715.15 | transcript | ENST00000261205.9 | protein_coding | 3/10 | INFO_REALIGN_3_PRIME | chr12 | TogoVar | ||||||
SYT1_chr12_78859774_79457008 | 79179217 | TATATAG | T | intron_variant | MODIFIER | HG02559.hp1 NA20300.hp2 |
a0001 | a0001c0001 | a0001c0001t0006 | a0001c0001t0006g0001 | 2 | 62 | 0.0323 | -6 | c.-17 others(25): Show |
SYT1 | ENSG00000067715.15 | transcript | ENST00000261205.9 | protein_coding | 3/10 | INFO_REALIGN_3_PRIME | chr12 | TogoVar | ||||||
SYT1_chr12_78859774_79457008 | 79179520 | TATATAG | T | intron_variant | MODIFIER | HG00621.hp1 HG00621.hp2 HG00741.hp1 others(30): Show |
a0001 | a0001c0001 | a0001c0001t0001a0001c0001t0002a0001c0001t0003others(9): Show | a0001c0001t0001g0019 a0001c0001t0001g0022 a0001c0001t0001g0027 others(30): Show |
33 | 62 | 0.5323 | -6 | c.-17 others(25): Show |
SYT1 | ENSG00000067715.15 | transcript | ENST00000261205.9 | protein_coding | 3/10 | INFO_REALIGN_3_PRIME | chr12 | TogoVar | ||||||
SYT1_chr12_78859774_79457008 | 79214941 | ATGTGTG | A | intron_variant | MODIFIER | HG01243.hp2 NA18952.hp1 NA19056.hp2 others(1): Show |
a0001 | a0001c0001a0001c0002 | a0001c0001t0001a0001c0001t0005a0001c0001t0009others(1): Show | a0001c0001t0001g0027 a0001c0001t0005g0011 a0001c0001t0009g0016 others(1): Show |
4 | 62 | 0.0645 | -6 | c.-17 others(23): Show |
SYT1 | ENSG00000067715.15 | transcript | ENST00000261205.9 | protein_coding | 3/10 | INFO_REALIGN_3_PRIME | chr12 | TogoVar | ||||||
SYT1_chr12_78859774_79457008 | 79224748 | TTTTTTA | T | intron_variant | MODIFIER | HG01256.hp2 HG01258.hp1 HG01261.hp2 others(6): Show |
a0001 | a0001c0002 | a0001c0002t0001a0001c0002t0002a0001c0002t0004others(5): Show | a0001c0002t0001g0029 a0001c0002t0002g0020 a0001c0002t0004g0051 others(6): Show |
9 | 62 | 0.1452 | -6 | c.166 others(23): Show |
SYT1 | ENSG00000067715.15 | transcript | ENST00000261205.9 | protein_coding | 4/10 | INFO_REALIGN_3_PRIME | chr12 | TogoVar | ||||||
SYT1_chr12_78859774_79457008 | 79253483 | GTCTCTC | G | intron_variant | MODIFIER | HG01255.hp2 HG01258.hp2 HG01261.hp1 others(10): Show |
a0001 | a0001c0001 | a0001c0001t0001a0001c0001t0002a0001c0001t0003others(5): Show | a0001c0001t0001g0031 a0001c0001t0001g0046 a0001c0001t0002g0010 others(10): Show |
13 | 62 | 0.2097 | -6 | c.167 others(25): Show |
SYT1 | ENSG00000067715.15 | transcript | ENST00000261205.9 | protein_coding | 4/10 | INFO_REALIGN_3_PRIME | chr12 | TogoVar | ||||||
SYT1_chr12_78859774_79457008 | 79308606 | GAAAGAA | G | intron_variant | MODIFIER | HG02965.hp1 NA18906.hp2 NA18952.hp1 |
a0001 | a0001c0001a0001c0002 | a0001c0001t0008a0001c0002t0004a0001c0002t0010 | a0001c0001t0008g0032 a0001c0002t0004g0028 a0001c0002t0010g0006 |
3 | 62 | 0.0484 | -6 | c.810 others(23): Show |
SYT1 | ENSG00000067715.15 | transcript | ENST00000261205.9 | protein_coding | 8/10 | INFO_REALIGN_3_PRIME | chr12 | TogoVar | ||||||
SYT1_chr12_78859774_79457008 | 79366894 | CTGTGTG | C | intron_variant | MODIFIER | HG00621.hp1 HG00741.hp2 HG01243.hp1 others(4): Show |
a0001 | a0001c0001a0001c0003 | a0001c0001t0001a0001c0001t0003a0001c0001t0006others(1): Show | a0001c0001t0001g0022 a0001c0001t0001g0039 a0001c0001t0001g0058 others(3): Show |
7 | 62 | 0.1129 | -6 | c.928 others(25): Show |
SYT1 | ENSG00000067715.15 | transcript | ENST00000261205.9 | protein_coding | 9/10 | INFO_REALIGN_3_PRIME | chr12 | TogoVar | ||||||
SYT1_chr12_78859774_79457008 | 79449923 | CGTGTGT | C | 3_prime_UTR_variant | MODIFIER | HG02559.hp1 HG03195.hp2 NA20300.hp2 |
a0001 | a0001c0001a0001c0002 | a0001c0001t0006a0001c0002t0006 | a0001c0001t0006g0001 a0001c0002t0006g0007 |
3 | 62 | 0.0484 | -6 | c.*82 others(15): Show |
SYT1 | ENSG00000067715.15 | transcript | ENST00000261205.9 | protein_coding | 11/11 | 829 | INFO_REALIGN_3_PRIME | chr12 | TogoVar | |||||
SYT2_chr1_202585596_202715454 | 202596223 | GACACAC | G | 3_prime_UTR_variant | MODIFIER | HG00609.hp1 HG02135.hp1 NA18964.hp2 |
a0001 | a0001c0003 | a0001c0003t0088a0001c0003t0089a0001c0003t0097 | a0001c0003t0088g0156 a0001c0003t0089g0074 a0001c0003t0097g0119 |
3 | 276 | 0.0109 | -6 | c.*52 others(15): Show |
SYT2 | ENSG00000143858.12 | transcript | ENST00000367268.5 | protein_coding | 9/9 | 528 | chr1 | TogoVar | ||||||
SYT2_chr1_202585596_202715454 | 202596302 | CACACAT | C | 3_prime_UTR_variant | MODIFIER | HG00280.hp1 HG00323.hp2 HG00735.hp2 others(21): Show |
a0001 | a0001c0001a0001c0003 | a0001c0001t0009a0001c0001t0032a0001c0001t0122others(7): Show | a0001c0001t0009g0056 a0001c0001t0009g0243 a0001c0001t0009g0244 others(21): Show |
24 | 276 | 0.0870 | -6 | c.*44 others(15): Show |
SYT2 | ENSG00000143858.12 | transcript | ENST00000367268.5 | protein_coding | 9/9 | 449 | chr1 | TogoVar | ||||||
SYT2_chr1_202585596_202715454 | 202622555 | AGCAATT | A | intron_variant | MODIFIER | HG00099.hp2 HG00140.hp1 HG00673.hp1 others(32): Show |
a0001 | a0001c0001a0001c0002a0001c0003others(1): Show | a0001c0001t0001a0001c0001t0003a0001c0001t0004others(22): Show | a0001c0001t0001g0016 a0001c0001t0003g0224 a0001c0001t0004g0012 others(32): Show |
35 | 276 | 0.1268 | -6 | c.-17 others(25): Show |
SYT2 | ENSG00000143858.12 | transcript | ENST00000367268.5 | protein_coding | 1/8 | chr1 | TogoVar | |||||||
SYT2_chr1_202585596_202715454 | 202640734 | CAGAGAG | C | intron_variant | MODIFIER | HG00597.hp2 HG00642.hp2 HG00741.hp2 others(9): Show |
a0001 | a0001c0001a0001c0002a0001c0003 | a0001c0001t0001a0001c0001t0004a0001c0001t0090others(6): Show | a0001c0001t0001g0006 a0001c0001t0004g0220 a0001c0001t0090g0223 others(9): Show |
12 | 276 | 0.0435 | -6 | c.-17 others(25): Show |
SYT2 | ENSG00000143858.12 | transcript | ENST00000367268.5 | protein_coding | 1/8 | chr1 | TogoVar | |||||||
SYT2_chr1_202585596_202715454 | 202643318 | AGGGCGG | A | intron_variant | MODIFIER | HG00280.hp1 HG00438.hp1 HG00438.hp2 others(70): Show |
a0001 | a0001c0001a0001c0002a0001c0003others(2): Show | a0001c0001t0001a0001c0001t0003a0001c0001t0009others(39): Show | a0001c0001t0001g0001 a0001c0001t0001g0002 a0001c0001t0001g0003 others(70): Show |
73 | 276 | 0.2645 | -6 | c.-17 others(25): Show |
SYT2 | ENSG00000143858.12 | transcript | ENST00000367268.5 | protein_coding | 1/8 | chr1 | TogoVar | |||||||
SYT2_chr1_202585596_202715454 | 202667466 | CGTGTGT | C | intron_variant | MODIFIER | HG00558.hp2 HG01361.hp2 HG01978.hp1 others(2): Show |
a0001 | a0001c0001a0001c0002a0001c0003 | a0001c0001t0118a0001c0001t0123a0001c0002t0010others(2): Show | a0001c0001t0118g0038 a0001c0001t0123g0274 a0001c0002t0010g0084 others(2): Show |
5 | 276 | 0.0181 | -6 | c.-18 others(25): Show |
SYT2 | ENSG00000143858.12 | transcript | ENST00000367268.5 | protein_coding | 1/8 | chr1 | TogoVar | |||||||
SYT2_chr1_202585596_202715454 | 202691684 | GGGGAGA | G | intron_variant | MODIFIER | HG01168.hp1 HG02559.hp1 HG02615.hp2 others(7): Show |
a0001 | a0001c0001a0001c0002a0001c0003others(1): Show | a0001c0001t0017a0001c0001t0038a0001c0001t0114others(7): Show | a0001c0001t0017g0032 a0001c0001t0038g0070 a0001c0001t0114g0037 others(7): Show |
10 | 276 | 0.0362 | -6 | c.-18 others(25): Show |
SYT2 | ENSG00000143858.12 | transcript | ENST00000367268.5 | protein_coding | 1/8 | chr1 | TogoVar | |||||||
SYT2_chr1_202585596_202715454 | 202691726 | AGGGGGG | A | intron_variant | MODIFIER | HG00099.hp2 HG00673.hp2 HG00741.hp1 others(23): Show |
a0001 | a0001c0001a0001c0002a0001c0003others(1): Show | a0001c0001t0001a0001c0001t0004a0001c0001t0047others(15): Show | a0001c0001t0001g0016 a0001c0001t0001g0106 a0001c0001t0001g0249 others(23): Show |
26 | 276 | 0.0942 | -6 | c.-18 others(25): Show |
SYT2 | ENSG00000143858.12 | transcript | ENST00000367268.5 | protein_coding | 1/8 | chr1 | TogoVar | |||||||
SYT3_chr19_50616977_50644881 | 50619385 | CCTTCCT | C | downstream_gene_variant | MODIFIER | HG02683.hp1 HG02698.hp1 HG02735.hp2 |
a0001 | a0001c0001a0001c0002 | a0001c0001t0001a0001c0002t0002 | a0001c0001t0001g0015 a0001c0002t0002g0005 |
3 | 388 | 0.0077 | -6 | c.*30 others(17): Show |
SYT3 | ENSG00000213023.11 | transcript | ENST00000600079.6 | protein_coding | 2591 | chr19 | TogoVar | |||||||
SYT3_chr19_50616977_50644881 | 50619900 | TTTATTA | T | downstream_gene_variant | MODIFIER | HG00558.hp2 HG03669.hp1 NA18980.hp2 |
a0001 | a0001c0002 | a0001c0002t0002 | a0001c0002t0002g0011 a0001c0002t0002g0071 a0001c0002t0002g0088 |
3 | 388 | 0.0077 | -6 | c.*25 others(17): Show |
SYT3 | ENSG00000213023.11 | transcript | ENST00000600079.6 | protein_coding | 2076 | chr19 | TogoVar | |||||||
SYT3_chr19_50616977_50644881 | 50619949 | TTTATTA | T | downstream_gene_variant | MODIFIER | HG00408.hp1 NA18944.hp1 NA19054.hp1 |
a0001 | a0001c0002 | a0001c0002t0002 | a0001c0002t0002g0011 a0001c0002t0002g0025 a0001c0002t0002g0078 |
3 | 388 | 0.0077 | -6 | c.*25 others(17): Show |
SYT3 | ENSG00000213023.11 | transcript | ENST00000600079.6 | protein_coding | 2027 | chr19 | TogoVar | |||||||
SYT3_chr19_50616977_50644881 | 50619992 | TTACTAC | T | downstream_gene_variant | MODIFIER | HG00544.hp1 HG00597.hp2 HG00741.hp2 others(74): Show |
a0001a0003a0005 | a0001c0001a0001c0003a0001c0004others(6): Show | a0001c0001t0001a0001c0001t0003a0001c0001t0004others(14): Show | a0001c0001t0001g0014 a0001c0001t0001g0019 a0001c0001t0001g0042 others(59): Show |
77 | 388 | 0.1985 | -6 | c.*24 others(17): Show |
SYT3 | ENSG00000213023.11 | transcript | ENST00000600079.6 | protein_coding | 1984 | chr19 | TogoVar | |||||||
SYT5_chr19_55166196_55185289 | 55168402 | TATATAG | T | downstream_gene_variant | MODIFIER | HG01081.hp1 HG01192.hp1 HG02145.hp2 others(6): Show |
a0001 | a0001c0001 | a0001c0001t0009a0001c0001t0017a0001c0001t0027others(3): Show | a0001c0001t0009g0006 a0001c0001t0017g0058 a0001c0001t0027g0122 others(3): Show |
9 | 410 | 0.0220 | -6 | c.*50 others(17): Show |
SYT5 | ENSG00000129990.15 | transcript | ENST00000354308.8 | protein_coding | 2793 | chr19 | TogoVar | |||||||
SYT5_chr19_55166196_55185289 | 55168404 | TATAGAG | T | downstream_gene_variant | MODIFIER | HG00639.hp2 HG01109.hp2 HG01243.hp2 others(6): Show |
a0001a0002 | a0001c0001a0002c0003 | a0001c0001t0004a0001c0001t0009a0001c0001t0029others(4): Show | a0001c0001t0004g0008 a0001c0001t0004g0040 a0001c0001t0009g0182 others(6): Show |
9 | 410 | 0.0220 | -6 | c.*50 others(17): Show |
SYT5 | ENSG00000129990.15 | transcript | ENST00000354308.8 | protein_coding | 2791 | chr19 | TogoVar | |||||||
SYT5_chr19_55166196_55185289 | 55168406 | TAGAGAG | T | downstream_gene_variant | MODIFIER | HG00558.hp1 HG01069.hp2 HG01071.hp1 others(10): Show |
a0001a0002a0004 | a0001c0001a0001c0002a0001c0006others(2): Show | a0001c0001t0004a0001c0001t0017a0001c0001t0029others(7): Show | a0001c0001t0004g0114 a0001c0001t0004g0134 a0001c0001t0017g0057 others(8): Show |
13 | 410 | 0.0317 | -6 | c.*50 others(17): Show |
SYT5 | ENSG00000129990.15 | transcript | ENST00000354308.8 | protein_coding | 2789 | chr19 | TogoVar | |||||||
SYT5_chr19_55166196_55185289 | 55171305 | CCACACA | C | 3_prime_UTR_variant | MODIFIER | HG00408.hp2 HG00438.hp2 HG00544.hp2 others(70): Show |
a0001a0008a0010 | a0001c0001a0001c0002a0008c0014others(1): Show | a0001c0001t0019a0001c0001t0025a0001c0001t0062others(8): Show | a0001c0001t0019g0030 a0001c0001t0019g0143 a0001c0001t0019g0150 others(18): Show |
73 | 410 | 0.1781 | -6 | c.*21 others(17): Show |
SYT5 | ENSG00000129990.15 | transcript | ENST00000354308.8 | protein_coding | 9/9 | 2173 | chr19 | TogoVar | ||||||
SYT8_chr11_1829990_1842521 | 1833815 | CGTGTGT | C | upstream_gene_variant | MODIFIER | HG00140.hp2 HG00738.hp1 HG01243.hp2 others(19): Show |
a0001a0002a0003others(3): Show | a0001c0001a0002c0002a0003c0003others(5): Show | a0001c0001t0001a0002c0002t0001a0003c0003t0001others(5): Show | a0001c0001t0001g0008 a0001c0001t0001g0018 a0002c0002t0001g0001 others(7): Show |
22 | 456 | 0.0483 | -6 | c.-12 others(17): Show |
SYT8 | ENSG00000149043.17 | transcript | ENST00000341958.4 | protein_coding | 1174 | chr11 | TogoVar | |||||||
SYT9_chr11_7246904_7474043 | 7251099 | GACACAC | G | upstream_gene_variant | MODIFIER | HG00099.hp2 HG00280.hp2 HG01070.hp2 others(20): Show |
a0001 | a0001c0001a0001c0002 | a0001c0001t0001a0001c0001t0002a0001c0001t0003others(8): Show | a0001c0001t0001g0156 a0001c0001t0001g0163 a0001c0001t0002g0154 others(20): Show |
23 | 272 | 0.0846 | -6 | c.-10 others(17): Show |
SYT9 | ENSG00000170743.17 | transcript | ENST00000318881.11 | protein_coding | 804 | chr11 | TogoVar | |||||||
SYT9_chr11_7246904_7474043 | 7270832 | GACACAC | G | intron_variant | MODIFIER | HG00099.hp2 HG00140.hp2 HG01261.hp1 others(13): Show |
a0001 | a0001c0001a0001c0002 | a0001c0001t0001a0001c0001t0002a0001c0001t0003others(4): Show | a0001c0001t0001g0054 a0001c0001t0001g0055 a0001c0001t0002g0001 others(12): Show |
16 | 272 | 0.0588 | -6 | c.145 others(25): Show |
SYT9 | ENSG00000170743.17 | transcript | ENST00000318881.11 | protein_coding | 1/6 | INFO_REALIGN_3_PRIME | chr11 | TogoVar | ||||||
SYT9_chr11_7246904_7474043 | 7297059 | GGTGTGT | G | intron_variant | MODIFIER | HG00140.hp1 HG00140.hp2 HG00280.hp1 others(119): Show |
a0001a0003a0005 | a0001c0001a0001c0002a0001c0003others(3): Show | a0001c0001t0001a0001c0001t0002a0001c0001t0003others(30): Show | a0001c0001t0001g0053 a0001c0001t0001g0054 a0001c0001t0001g0055 others(118): Show |
122 | 272 | 0.4485 | -6 | c.146 others(23): Show |
SYT9 | ENSG00000170743.17 | transcript | ENST00000318881.11 | protein_coding | 1/6 | INFO_REALIGN_3_PRIME | chr11 | TogoVar | ||||||
SYT9_chr11_7246904_7474043 | 7297081 | TGTGTGA | T | intron_variant | MODIFIER | HG00099.hp2 HG00639.hp1 HG00639.hp2 others(15): Show |
a0001a0003a0004 | a0001c0001a0001c0002a0001c0003others(2): Show | a0001c0001t0002a0001c0001t0003a0001c0001t0006others(9): Show | a0001c0001t0002g0174 a0001c0001t0002g0229 a0001c0001t0002g0264 others(15): Show |
18 | 272 | 0.0662 | -6 | c.146 others(23): Show |
SYT9 | ENSG00000170743.17 | transcript | ENST00000318881.11 | protein_coding | 1/6 | INFO_REALIGN_3_PRIME | chr11 | TogoVar | ||||||
SYT9_chr11_7246904_7474043 | 7328076 | AAATAAT | A | intron_variant | MODIFIER | HG00597.hp1 HG00609.hp2 HG00639.hp1 others(38): Show |
a0001a0003 | a0001c0001a0001c0002a0001c0003others(2): Show | a0001c0001t0001a0001c0001t0002a0001c0001t0003others(10): Show | a0001c0001t0001g0049 a0001c0001t0001g0215 a0001c0001t0001g0218 others(37): Show |
41 | 272 | 0.1507 | -6 | c.104 others(27): Show |
SYT9 | ENSG00000170743.17 | transcript | ENST00000318881.11 | protein_coding | 3/6 | INFO_REALIGN_3_PRIME | chr11 | TogoVar | ||||||
SYT9_chr11_7246904_7474043 | 7344929 | TACACAC | T | intron_variant | MODIFIER | HG01516.hp1 HG03041.hp1 NA21309.hp2 |
a0001 | a0001c0001 | a0001c0001t0001a0001c0001t0004a0001c0001t0007 | a0001c0001t0001g0021 a0001c0001t0004g0126 a0001c0001t0007g0238 |
3 | 272 | 0.0110 | -6 | c.104 others(27): Show |
SYT9 | ENSG00000170743.17 | transcript | ENST00000318881.11 | protein_coding | 3/6 | INFO_REALIGN_3_PRIME | chr11 | TogoVar | ||||||
SYT9_chr11_7246904_7474043 | 7384062 | CCACACA | C | intron_variant | MODIFIER | HG00099.hp2 HG00140.hp1 HG00140.hp2 others(128): Show |
a0001a0002a0003others(1): Show | a0001c0001a0001c0002a0001c0003others(7): Show | a0001c0001t0001a0001c0001t0002a0001c0001t0003others(32): Show | a0001c0001t0001g0021 a0001c0001t0001g0024 a0001c0001t0001g0049 others(127): Show |
131 | 272 | 0.4816 | -6 | c.104 others(27): Show |
SYT9 | ENSG00000170743.17 | transcript | ENST00000318881.11 | protein_coding | 3/6 | INFO_REALIGN_3_PRIME | chr11 | TogoVar | ||||||
SYT9_chr11_7246904_7474043 | 7406535 | CATATAT | C | intron_variant | MODIFIER | HG00609.hp2 HG00642.hp2 HG01074.hp2 others(27): Show |
a0001a0003 | a0001c0001a0001c0002a0001c0003others(1): Show | a0001c0001t0001a0001c0001t0002a0001c0001t0003others(9): Show | a0001c0001t0001g0085 a0001c0001t0001g0124 a0001c0001t0001g0183 others(27): Show |
30 | 272 | 0.1103 | -6 | c.104 others(25): Show |
SYT9 | ENSG00000170743.17 | transcript | ENST00000318881.11 | protein_coding | 3/6 | INFO_REALIGN_3_PRIME | chr11 | TogoVar | ||||||
SYT9_chr11_7246904_7474043 | 7407360 | ATTTTTT | A | intron_variant | MODIFIER | HG00140.hp1 HG00438.hp1 HG00558.hp1 others(52): Show |
a0001a0002a0004others(1): Show | a0001c0001a0001c0002a0001c0003others(4): Show | a0001c0001t0001a0001c0001t0002a0001c0001t0003others(22): Show | a0001c0001t0001g0024 a0001c0001t0001g0085 a0001c0001t0001g0104 others(52): Show |
55 | 272 | 0.2022 | -6 | c.104 others(25): Show |
SYT9 | ENSG00000170743.17 | transcript | ENST00000318881.11 | protein_coding | 3/6 | INFO_REALIGN_3_PRIME | chr11 | TogoVar | ||||||
SYTL1_chr1_27337022_27358932 | 27354485 | GTGTTTT | G | downstream_gene_variant | MODIFIER | HG02818.hp1 HG02818.hp2 HG03209.hp1 others(3): Show |
a0001a0002 | a0001c0004a0002c0003 | a0001c0004t0001a0002c0003t0001 | a0001c0004t0001g0001 a0001c0004t0001g0004 a0001c0004t0001g0033 others(1): Show |
6 | 378 | 0.0159 | -6 | c.*63 others(15): Show |
SYTL1 | ENSG00000142765.18 | transcript | ENST00000616558.5 | protein_coding | 554 | chr1 | TogoVar | |||||||
SYTL2_chr11_85689229_85816141 | 85752917 | TAAAAAA | T | intron_variant | MODIFIER | HG01099.hp2 HG02273.hp1 HG02451.hp2 others(14): Show |
a0003a0005a0017 | a0003c0005a0005c0006a0017c0013 | a0003c0005t0001a0003c0005t0002a0005c0006t0002others(1): Show | a0003c0005t0001g0046 a0003c0005t0002g0047 a0003c0005t0002g0049 others(13): Show |
17 | 366 | 0.0465 | -6 | c.102 others(23): Show |
SYTL2 | ENSG00000137501.18 | transcript | ENST00000359152.10 | protein_coding | 2/19 | chr11 | TogoVar | |||||||
SYTL2_chr11_85689229_85816141 | 85777812 | CTTTTTT | C | intron_variant | MODIFIER | HG00741.hp1 HG01099.hp2 HG02145.hp2 others(18): Show |
a0002a0003a0005 | a0002c0003a0003c0005a0005c0006 | a0002c0003t0002a0003c0005t0001a0003c0005t0002others(1): Show | a0002c0003t0002g0051 a0002c0003t0002g0062 a0003c0005t0001g0046 others(17): Show |
21 | 366 | 0.0574 | -6 | c.-38 others(27): Show |
SYTL2 | ENSG00000137501.18 | transcript | ENST00000359152.10 | protein_coding | 1/19 | chr11 | TogoVar | |||||||
SYTL2_chr11_85689229_85816141 | 85787694 | TCTTTTC | T | intron_variant | MODIFIER | HG00323.hp1 HG00639.hp2 HG00735.hp2 others(18): Show |
a0002a0004a0012others(2): Show | a0002c0002a0002c0003a0004c0004others(3): Show | a0002c0002t0003a0002c0003t0001a0002c0003t0002others(5): Show | a0002c0002t0003g0363 a0002c0003t0001g0222 a0002c0003t0001g0223 others(18): Show |
21 | 366 | 0.0574 | -6 | c.-39 others(27): Show |
SYTL2 | ENSG00000137501.18 | transcript | ENST00000359152.10 | protein_coding | 1/19 | chr11 | TogoVar | |||||||
SYTL2_chr11_85689229_85816141 | 85789340 | GTATATA | G | intron_variant | MODIFIER | HG00639.hp2 HG01074.hp1 HG01192.hp2 others(39): Show |
a0001a0002a0020others(2): Show | a0001c0001a0002c0002a0020c0037others(2): Show | a0001c0001t0001a0001c0001t0005a0001c0001t0013others(4): Show | a0001c0001t0001g0006 a0001c0001t0001g0007 a0001c0001t0001g0198 others(39): Show |
42 | 366 | 0.1148 | -6 | c.-39 others(27): Show |
SYTL2 | ENSG00000137501.18 | transcript | ENST00000359152.10 | protein_coding | 1/19 | chr11 | TogoVar | |||||||
SYTL2_chr11_85689229_85816141 | 85789372 | ATATATG | A | intron_variant | MODIFIER | HG00280.hp1 HG00597.hp1 HG00621.hp1 others(12): Show |
a0001a0002a0006others(5): Show | a0001c0001a0001c0020a0002c0002others(6): Show | a0001c0001t0001a0001c0020t0002a0002c0002t0001others(7): Show | a0001c0001t0001g0307 a0001c0020t0002g0315 a0002c0002t0001g0164 others(12): Show |
15 | 366 | 0.0410 | -6 | c.-39 others(27): Show |
SYTL2 | ENSG00000137501.18 | transcript | ENST00000359152.10 | protein_coding | 1/19 | chr11 | TogoVar | |||||||
SYTL3_chr6_158645054_158769871 | 158677705 | CAAAAAA | C | intron_variant | MODIFIER | HG01891.hp1 HG03225.hp1 HG03486.hp2 others(5): Show |
a0001a0002a0003 | a0001c0001a0002c0002a0003c0004 | a0001c0001t0001a0002c0002t0001a0003c0004t0001 | a0001c0001t0001g0146 a0001c0001t0001g0203 a0002c0002t0001g0057 others(5): Show |
8 | 292 | 0.0274 | -6 | c.330 others(23): Show |
SYTL3 | ENSG00000164674.17 | transcript | ENST00000611299.5 | protein_coding | 5/17 | INFO_REALIGN_3_PRIME | chr6 | TogoVar | ||||||
SYTL3_chr6_158645054_158769871 | 158703816 | TATTATC | T | intron_variant | MODIFIER | HG01257.hp1 HG03041.hp1 HG03098.hp2 others(1): Show |
a0001a0002a0004 | a0001c0001a0002c0005a0004c0003 | a0001c0001t0002a0002c0005t0001a0002c0005t0002others(1): Show | a0001c0001t0002g0005 a0002c0005t0001g0001 a0002c0005t0002g0010 others(1): Show |
4 | 292 | 0.0137 | -6 | c.395 others(23): Show |
SYTL3 | ENSG00000164674.17 | transcript | ENST00000611299.5 | protein_coding | 6/17 | INFO_REALIGN_3_PRIME | chr6 | TogoVar | ||||||
SYTL4_chrX_100669491_100737121 | 100675888 | GTACACA | G | 3_prime_UTR_variant | MODIFIER | HG02559.hp2 | a0001 | a0001c0002 | a0001c0002t0018 | a0001c0002t0018g0116 | 1 | 285 | 0.0035 | -6 | c.*13 others(15): Show |
SYTL4 | ENSG00000102362.16 | transcript | ENST00000372989.6 | protein_coding | 20/20 | 134 | chrX | TogoVar | ||||||
SYTL4_chrX_100669491_100737121 | 100675915 | CACACAT | C | 3_prime_UTR_variant | MODIFIER | HG02280.hp2 | a0001 | a0001c0002 | a0001c0002t0026 | a0001c0002t0026g0252 | 1 | 285 | 0.0035 | -6 | c.*10 others(15): Show |
SYTL4 | ENSG00000102362.16 | transcript | ENST00000372989.6 | protein_coding | 20/20 | 107 | chrX | TogoVar | ||||||
SYTL4_chrX_100669491_100737121 | 100715945 | CAAAAAA | C | intron_variant | MODIFIER | HG01109.hp1 HG01255.hp1 HG01884.hp1 others(25): Show |
a0001 | a0001c0001a0001c0002 | a0001c0001t0004a0001c0002t0001a0001c0002t0003others(7): Show | a0001c0001t0004g0009 a0001c0002t0001g0114 a0001c0002t0001g0118 others(25): Show |
28 | 285 | 0.0983 | -6 | c.-23 others(27): Show |
SYTL4 | ENSG00000102362.16 | transcript | ENST00000372989.6 | protein_coding | 2/19 | chrX | TogoVar | |||||||
SYTL4_chrX_100669491_100737121 | 100716450 | CAAAAAA | C | intron_variant | MODIFIER | HG02630.hp2 HG02818.hp1 HG02886.hp1 others(4): Show |
a0001a0002 | a0001c0001a0001c0002a0002c0003 | a0001c0001t0001a0001c0001t0003a0001c0001t0024others(3): Show | a0001c0001t0001g0155 a0001c0001t0003g0158 a0001c0001t0024g0183 others(4): Show |
7 | 285 | 0.0246 | -6 | c.-23 others(27): Show |
SYTL4 | ENSG00000102362.16 | transcript | ENST00000372989.6 | protein_coding | 2/19 | chrX | TogoVar | |||||||
SYTL5_chrX_38001553_38133816 | 38011633 | CAAAAAA | C | intron_variant | MODIFIER | HG02280.hp2 HG03516.hp2 |
a0001 | a0001c0002 | a0001c0002t0002 | a0001c0002t0002g0070 a0001c0002t0002g0071 |
2 | 250 | 0.0080 | -6 | c.-35 others(25): Show |
SYTL5 | ENSG00000147041.12 | transcript | ENST00000297875.7 | protein_coding | 1/16 | INFO_REALIGN_3_PRIME | chrX | TogoVar | ||||||
SYTL5_chrX_38001553_38133816 | 38020408 | CATATAT | C | intron_variant | MODIFIER | HG00558.hp2 HG00597.hp2 HG00609.hp1 others(40): Show |
a0001a0002a0003others(1): Show | a0001c0001a0001c0002a0001c0004others(3): Show | a0001c0001t0001a0001c0001t0003a0001c0001t0004others(10): Show | a0001c0001t0001g0083 a0001c0001t0001g0105 a0001c0001t0001g0108 others(40): Show |
43 | 250 | 0.1720 | -6 | c.-35 others(27): Show |
SYTL5 | ENSG00000147041.12 | transcript | ENST00000297875.7 | protein_coding | 1/16 | INFO_REALIGN_3_PRIME | chrX | TogoVar |