view | regionname | pos | ref | alt | annotation | impact | samples | ahapids | chapids | thapids | thapids | ac | an | af | len | hgvs_c | hgvs_p | genename | geneid | featuretype | featureid | transcript_biotype | rank | cdna cdna pos length
|
cds cds pos length
|
aa aa pos length
|
distance | status | chr | external |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
TSG101_chr11_18475311_18531942 | 18528249 | ACTGTAC | A | upstream_gene_variant | MODIFIER | HG02257.hp2 HG02258.hp2 HG02723.hp1 others(7): Show |
a0001 | a0001c0001 | a0001c0001t0001 | a0001c0001t0001g0245 a0001c0001t0001g0246 a0001c0001t0001g0247 others(7): Show |
10 | 404 | 0.0248 | -6 | c.-14 others(17): Show |
TSG101 | ENSG00000074319.13 | transcript | ENST00000251968.4 | protein_coding | 1308 | chr11 | TogoVar | |||||||
TSG101_chr11_18475311_18531942 | 18528342 | CATATAT | C | upstream_gene_variant | MODIFIER | HG00597.hp2 HG01123.hp1 HG01168.hp1 others(18): Show |
a0001 | a0001c0001a0001c0003 | a0001c0001t0001a0001c0003t0001 | a0001c0001t0001g0009 a0001c0001t0001g0225 a0001c0001t0001g0240 others(18): Show |
21 | 298 | 0.0705 | -6 | c.-15 others(17): Show |
TSG101 | ENSG00000074319.13 | transcript | ENST00000251968.4 | protein_coding | 1401 | chr11 | TogoVar | |||||||
TSGA10IP_chr11_65940480_65964966 | 65951518 | TTTATTA | T | intron_variant | MODIFIER | HG00558.hp2 HG00673.hp1 HG02129.hp2 others(13): Show |
a0002a0003 | a0002c0002a0003c0003 | a0002c0002t0001a0003c0003t0001 | a0002c0002t0001g0070 a0003c0003t0001g0018 a0003c0003t0001g0019 others(6): Show |
16 | 25 | 0.6400 | -6 | c.115 others(25): Show |
TSGA10IP | ENSG00000175513.10 | transcript | ENST00000532620.6 | protein_coding | 4/7 | INFO_REALIGN_3_PRIME | chr11 | TogoVar | ||||||
TSGA13_chr7_130663643_130691545 | 130686693 | TACACAC | T | upstream_gene_variant | MODIFIER | HG00140.hp2 HG00408.hp2 HG00597.hp1 others(117): Show |
a0001a0002 | a0001c0001a0002c0002 | a0001c0001t0001a0001c0001t0002a0001c0001t0004others(4): Show | a0001c0001t0001g0001 a0001c0001t0001g0007 a0001c0001t0001g0008 others(46): Show |
120 | 182 | 0.6593 | -6 | c.-58 others(15): Show |
TSGA13 | ENSG00000213265.9 | transcript | ENST00000356588.8 | protein_coding | 149 | chr7 | TogoVar | |||||||
TSHB_chr1_115024826_115039302 | 115032722 | GATATCA | G | intron_variant | MODIFIER | HG02717.hp2 HG03098.hp1 HG03453.hp1 others(1): Show |
a0001 | a0001c0001 | a0001c0001t0001 | a0001c0001t0001g0004 | 4 | 426 | 0.0094 | -6 | c.-1- others(19): Show |
TSHB | ENSG00000134200.4 | transcript | ENST00000256592.3 | protein_coding | 1/2 | INFO_REALIGN_3_PRIME | chr1 | TogoVar | ||||||
TSHR_chr14_80950621_81151306 | 80964750 | CTCACTA | C | intron_variant | MODIFIER | HG01884.hp2 HG02109.hp2 HG02922.hp2 others(4): Show |
a0001a0002a0006 | a0001c0001a0001c0002a0002c0003others(1): Show | a0001c0001t0011a0001c0001t0014a0001c0001t0020others(4): Show | a0001c0001t0011g0172 a0001c0001t0014g0003 a0001c0001t0020g0173 others(4): Show |
7 | 268 | 0.0261 | -6 | c.170 others(23): Show |
TSHR | ENSG00000165409.18 | transcript | ENST00000298171.7 | protein_coding | 1/9 | INFO_REALIGN_3_PRIME | chr14 | TogoVar | ||||||
TSHR_chr14_80950621_81151306 | 80978094 | AACACAC | A | intron_variant | MODIFIER | HG00140.hp1 HG00408.hp2 HG00438.hp2 others(79): Show |
a0001a0002a0003others(1): Show | a0001c0001a0001c0002a0002c0003others(4): Show | a0001c0001t0001a0001c0001t0002a0001c0001t0003others(20): Show | a0001c0001t0001g0072 a0001c0001t0001g0073 a0001c0001t0001g0110 others(79): Show |
82 | 100 | 0.8200 | -6 | c.170 others(25): Show |
TSHR | ENSG00000165409.18 | transcript | ENST00000298171.7 | protein_coding | 1/9 | INFO_REALIGN_3_PRIME | chr14 | TogoVar | ||||||
TSHR_chr14_80950621_81151306 | 81002781 | CTTTTTT | C | intron_variant | MODIFIER | HG02809.hp2 HG02886.hp1 HG03491.hp1 others(2): Show |
a0001a0003 | a0001c0001a0001c0002a0003c0004 | a0001c0001t0001a0001c0001t0005a0001c0002t0008others(1): Show | a0001c0001t0001g0101 a0001c0001t0001g0104 a0001c0001t0005g0105 others(2): Show |
5 | 209 | 0.0239 | -6 | c.170 others(25): Show |
TSHR | ENSG00000165409.18 | transcript | ENST00000298171.7 | protein_coding | 1/9 | INFO_REALIGN_3_PRIME | chr14 | TogoVar | ||||||
TSHR_chr14_80950621_81151306 | 81037422 | AACAAAC | A | intron_variant | MODIFIER | HG02040.hp1 HG02109.hp2 HG02559.hp2 others(4): Show |
a0001a0003 | a0001c0001a0001c0002a0003c0010 | a0001c0001t0001a0001c0002t0002a0001c0002t0005others(3): Show | a0001c0001t0001g0015 a0001c0001t0001g0104 a0001c0002t0002g0030 others(4): Show |
7 | 268 | 0.0261 | -6 | c.171 others(25): Show |
TSHR | ENSG00000165409.18 | transcript | ENST00000298171.7 | protein_coding | 1/9 | INFO_REALIGN_3_PRIME | chr14 | TogoVar | ||||||
TSHZ1_chr18_75205797_75294944 | 75246403 | GGTGTGT | G | intron_variant | MODIFIER | HG02602.hp1 HG02698.hp2 HG03453.hp1 others(1): Show |
a0001 | a0001c0001a0001c0009 | a0001c0001t0001a0001c0001t0002a0001c0001t0010others(1): Show | a0001c0001t0001g0100 a0001c0001t0002g0198 a0001c0001t0010g0042 others(1): Show |
4 | 11 | 0.3636 | -6 | c.40+ others(23): Show |
TSHZ1 | ENSG00000179981.11 | transcript | ENST00000580243.3 | protein_coding | 1/1 | INFO_REALIGN_3_PRIME | chr18 | TogoVar | ||||||
TSHZ2_chr20_52967358_53500330 | 52977421 | TACACAC | T | intron_variant | MODIFIER | HG00673.hp1 HG00738.hp1 HG00738.hp2 others(26): Show |
a0001a0002a0006others(1): Show | a0001c0001a0001c0002a0002c0003others(2): Show | a0001c0001t0001a0001c0001t0004a0001c0001t0006others(21): Show | a0001c0001t0001g0064 a0001c0001t0001g0148 a0001c0001t0004g0070 others(26): Show |
29 | 36 | 0.8056 | -6 | c.40+ others(21): Show |
TSHZ2 | ENSG00000182463.17 | transcript | ENST00000371497.10 | protein_coding | 1/2 | INFO_REALIGN_3_PRIME | chr20 | TogoVar | ||||||
TSHZ2_chr20_52967358_53500330 | 52997865 | GCTTTTA | G | intron_variant | MODIFIER | HG01891.hp1 HG03017.hp2 |
a0001a0003 | a0001c0001a0003c0006 | a0001c0001t0081a0003c0006t0015 | a0001c0001t0081g0027 a0003c0006t0015g0008 |
2 | 174 | 0.0115 | -6 | c.40+ others(23): Show |
TSHZ2 | ENSG00000182463.17 | transcript | ENST00000371497.10 | protein_coding | 1/2 | chr20 | TogoVar | |||||||
TSHZ2_chr20_52967358_53500330 | 53001205 | CGTGTGT | C | intron_variant | MODIFIER | HG00673.hp2 HG02015.hp1 HG02109.hp2 others(6): Show |
a0001a0002 | a0001c0001a0002c0003 | a0001c0001t0001a0001c0001t0007a0001c0001t0009others(6): Show | a0001c0001t0001g0160 a0001c0001t0007g0171 a0001c0001t0009g0131 others(6): Show |
9 | 93 | 0.0968 | -6 | c.40+ others(23): Show |
TSHZ2 | ENSG00000182463.17 | transcript | ENST00000371497.10 | protein_coding | 1/2 | INFO_REALIGN_3_PRIME | chr20 | TogoVar | ||||||
TSHZ2_chr20_52967358_53500330 | 53003255 | GGTGTGT | G | intron_variant | MODIFIER | HG02451.hp1 HG02723.hp2 NA18906.hp1 |
a0001a0002a0008 | a0001c0001a0002c0003a0008c0015 | a0001c0001t0052a0002c0003t0058a0008c0015t0073 | a0001c0001t0052g0007 a0002c0003t0058g0006 a0008c0015t0073g0097 |
3 | 23 | 0.1304 | -6 | c.40+ others(23): Show |
TSHZ2 | ENSG00000182463.17 | transcript | ENST00000371497.10 | protein_coding | 1/2 | INFO_REALIGN_3_PRIME | chr20 | TogoVar | ||||||
TSHZ2_chr20_52967358_53500330 | 53006871 | AAAAAAT | A | intron_variant | MODIFIER | HG01891.hp1 HG02257.hp1 HG03017.hp2 others(1): Show |
a0001a0003 | a0001c0001a0001c0012a0003c0006 | a0001c0001t0001a0001c0001t0081a0001c0012t0008others(1): Show | a0001c0001t0001g0093 a0001c0001t0081g0027 a0001c0012t0008g0096 others(1): Show |
4 | 174 | 0.0230 | -6 | c.40+ others(23): Show |
TSHZ2 | ENSG00000182463.17 | transcript | ENST00000371497.10 | protein_coding | 1/2 | INFO_REALIGN_3_PRIME | chr20 | TogoVar | ||||||
TSHZ2_chr20_52967358_53500330 | 53008980 | CCTCTCT | C | intron_variant | MODIFIER | HG01099.hp1 HG01106.hp1 HG01255.hp1 others(7): Show |
a0001a0003a0008 | a0001c0001a0001c0002a0003c0005others(1): Show | a0001c0001t0001a0001c0001t0002a0001c0001t0003others(7): Show | a0001c0001t0001g0154 a0001c0001t0002g0056 a0001c0001t0003g0090 others(7): Show |
10 | 33 | 0.3030 | -6 | c.40+ others(23): Show |
TSHZ2 | ENSG00000182463.17 | transcript | ENST00000371497.10 | protein_coding | 1/2 | INFO_REALIGN_3_PRIME | chr20 | TogoVar | ||||||
TSHZ2_chr20_52967358_53500330 | 53069662 | TACACAC | T | intron_variant | MODIFIER | HG01358.hp1 HG01891.hp2 HG02040.hp2 others(11): Show |
a0001a0002a0006 | a0001c0001a0001c0002a0001c0016others(2): Show | a0001c0001t0001a0001c0001t0004a0001c0001t0007others(11): Show | a0001c0001t0001g0064 a0001c0001t0004g0113 a0001c0001t0007g0060 others(11): Show |
14 | 17 | 0.8235 | -6 | c.40+ others(23): Show |
TSHZ2 | ENSG00000182463.17 | transcript | ENST00000371497.10 | protein_coding | 1/2 | INFO_REALIGN_3_PRIME | chr20 | TogoVar | ||||||
TSHZ2_chr20_52967358_53500330 | 53131819 | ACCCCCC | A | intron_variant | MODIFIER | HG00741.hp2 HG01099.hp1 HG01099.hp2 others(25): Show |
a0001a0003a0005others(2): Show | a0001c0001a0001c0002a0003c0006others(3): Show | a0001c0001t0001a0001c0001t0002a0001c0001t0003others(17): Show | a0001c0001t0001g0034 a0001c0001t0001g0035 a0001c0001t0001g0055 others(25): Show |
28 | 37 | 0.7568 | -6 | c.41- others(25): Show |
TSHZ2 | ENSG00000182463.17 | transcript | ENST00000371497.10 | protein_coding | 1/2 | INFO_REALIGN_3_PRIME | chr20 | TogoVar | ||||||
TSHZ2_chr20_52967358_53500330 | 53134969 | AACACAC | A | intron_variant | MODIFIER | HG00544.hp2 HG01074.hp2 HG01109.hp2 others(16): Show |
a0001 | a0001c0001a0001c0002 | a0001c0001t0001a0001c0001t0002a0001c0001t0004others(11): Show | a0001c0001t0001g0058 a0001c0001t0002g0170 a0001c0001t0004g0041 others(16): Show |
19 | 155 | 0.1226 | -6 | c.41- others(25): Show |
TSHZ2 | ENSG00000182463.17 | transcript | ENST00000371497.10 | protein_coding | 1/2 | INFO_REALIGN_3_PRIME | chr20 | TogoVar | ||||||
TSHZ2_chr20_52967358_53500330 | 53135007 | GACACAC | G | intron_variant | MODIFIER | HG00741.hp1 HG01106.hp2 HG01109.hp1 others(10): Show |
a0001a0002a0003 | a0001c0001a0002c0003a0003c0006 | a0001c0001t0001a0001c0001t0004a0001c0001t0010others(10): Show | a0001c0001t0001g0093 a0001c0001t0004g0071 a0001c0001t0010g0151 others(10): Show |
13 | 19 | 0.6842 | -6 | c.41- others(25): Show |
TSHZ2 | ENSG00000182463.17 | transcript | ENST00000371497.10 | protein_coding | 1/2 | INFO_REALIGN_3_PRIME | chr20 | TogoVar | ||||||
TSHZ2_chr20_52967358_53500330 | 53140539 | CAAAAAA | C | intron_variant | MODIFIER | HG01106.hp2 HG02109.hp1 HG02257.hp1 others(3): Show |
a0001a0002 | a0001c0001a0001c0012a0002c0003 | a0001c0001t0004a0001c0001t0014a0001c0001t0017others(3): Show | a0001c0001t0004g0071 a0001c0001t0014g0004 a0001c0001t0017g0083 others(3): Show |
6 | 65 | 0.0923 | -6 | c.41- others(25): Show |
TSHZ2 | ENSG00000182463.17 | transcript | ENST00000371497.10 | protein_coding | 1/2 | INFO_REALIGN_3_PRIME | chr20 | TogoVar | ||||||
TSHZ2_chr20_52967358_53500330 | 53175131 | CTTTTTT | C | intron_variant | MODIFIER | HG01106.hp2 HG01169.hp1 HG01496.hp2 others(8): Show |
a0001a0002a0003 | a0001c0001a0001c0002a0002c0003others(1): Show | a0001c0001t0004a0001c0001t0019a0001c0001t0024others(8): Show | a0001c0001t0004g0071 a0001c0001t0019g0149 a0001c0001t0024g0137 others(8): Show |
11 | 81 | 0.1358 | -6 | c.41- others(23): Show |
TSHZ2 | ENSG00000182463.17 | transcript | ENST00000371497.10 | protein_coding | 1/2 | INFO_REALIGN_3_PRIME | chr20 | TogoVar | ||||||
TSHZ2_chr20_52967358_53500330 | 53190086 | AATATAT | A | intron_variant | MODIFIER | HG01106.hp1 HG02738.hp2 HG02809.hp2 others(1): Show |
a0001a0003 | a0001c0001a0003c0006 | a0001c0001t0001a0001c0001t0002a0001c0001t0026others(1): Show | a0001c0001t0001g0064 a0001c0001t0002g0056 a0001c0001t0026g0072 others(1): Show |
4 | 36 | 0.1111 | -6 | c.41- others(23): Show |
TSHZ2 | ENSG00000182463.17 | transcript | ENST00000371497.10 | protein_coding | 1/2 | INFO_REALIGN_3_PRIME | chr20 | TogoVar | ||||||
TSHZ2_chr20_52967358_53500330 | 53226119 | AACACAC | A | intron_variant | MODIFIER | HG00099.hp2 HG01074.hp2 HG01099.hp2 others(10): Show |
a0001a0003a0005others(1): Show | a0001c0001a0001c0002a0003c0005others(2): Show | a0001c0001t0001a0001c0001t0004a0001c0001t0005others(7): Show | a0001c0001t0001g0034 a0001c0001t0004g0041 a0001c0001t0004g0043 others(10): Show |
13 | 43 | 0.3023 | -6 | c.41- others(23): Show |
TSHZ2 | ENSG00000182463.17 | transcript | ENST00000371497.10 | protein_coding | 1/2 | INFO_REALIGN_3_PRIME | chr20 | TogoVar | ||||||
TSHZ2_chr20_52967358_53500330 | 53228103 | AACACAC | A | intron_variant | MODIFIER | HG01074.hp2 HG01099.hp2 HG01106.hp1 others(16): Show |
a0001a0003a0005 | a0001c0001a0001c0002a0001c0012others(2): Show | a0001c0001t0001a0001c0001t0002a0001c0001t0004others(11): Show | a0001c0001t0001g0034 a0001c0001t0001g0055 a0001c0001t0001g0058 others(16): Show |
19 | 115 | 0.1652 | -6 | c.41- others(23): Show |
TSHZ2 | ENSG00000182463.17 | transcript | ENST00000371497.10 | protein_coding | 1/2 | INFO_REALIGN_3_PRIME | chr20 | TogoVar | ||||||
TSHZ2_chr20_52967358_53500330 | 53286886 | TACACAC | T | intron_variant | MODIFIER | HG00621.hp1 HG02683.hp2 HG03225.hp1 |
a0001 | a0001c0001 | a0001c0001t0002a0001c0001t0054a0001c0001t0083 | a0001c0001t0002g0170 a0001c0001t0054g0021 a0001c0001t0083g0125 |
3 | 56 | 0.0536 | -6 | c.*8+ others(23): Show |
TSHZ2 | ENSG00000182463.17 | transcript | ENST00000371497.10 | protein_coding | 2/2 | INFO_REALIGN_3_PRIME | chr20 | TogoVar | ||||||
TSHZ2_chr20_52967358_53500330 | 53323563 | CTTTTTT | C | intron_variant | MODIFIER | HG01106.hp2 HG01891.hp2 HG03195.hp2 others(4): Show |
a0001a0002a0004others(1): Show | a0001c0001a0002c0003a0004c0004others(1): Show | a0001c0001t0001a0001c0001t0043a0001c0001t0067others(4): Show | a0001c0001t0001g0154 a0001c0001t0043g0169 a0001c0001t0067g0033 others(4): Show |
7 | 27 | 0.2593 | -6 | c.*8+ others(23): Show |
TSHZ2 | ENSG00000182463.17 | transcript | ENST00000371497.10 | protein_coding | 2/2 | INFO_REALIGN_3_PRIME | chr20 | TogoVar | ||||||
TSHZ2_chr20_52967358_53500330 | 53340173 | CTTTCTT | C | intron_variant | MODIFIER | HG02723.hp2 HG02818.hp2 HG03098.hp1 others(1): Show |
a0001a0002a0006 | a0001c0001a0001c0011a0002c0003others(1): Show | a0001c0001t0022a0001c0011t0035a0002c0003t0058others(1): Show | a0001c0001t0022g0079 a0001c0011t0035g0174 a0002c0003t0058g0006 others(1): Show |
4 | 167 | 0.0240 | -6 | c.*8+ others(23): Show |
TSHZ2 | ENSG00000182463.17 | transcript | ENST00000371497.10 | protein_coding | 2/2 | INFO_REALIGN_3_PRIME | chr20 | TogoVar | ||||||
TSHZ2_chr20_52967358_53500330 | 53344208 | CTCCTCA | C | intron_variant | MODIFIER | HG00099.hp1 HG00099.hp2 HG00438.hp1 others(135): Show |
a0001a0002a0003others(5): Show | a0001c0001a0001c0002a0001c0009others(14): Show | a0001c0001t0001a0001c0001t0002a0001c0001t0003others(89): Show | a0001c0001t0001g0034 a0001c0001t0001g0035 a0001c0001t0001g0055 others(135): Show |
138 | 174 | 0.7931 | -6 | c.*8+ others(23): Show |
TSHZ2 | ENSG00000182463.17 | transcript | ENST00000371497.10 | protein_coding | 2/2 | INFO_REALIGN_3_PRIME | chr20 | TogoVar | ||||||
TSHZ2_chr20_52967358_53500330 | 53344211 | CTCATCA | C | intron_variant | MODIFIER | HG00544.hp2 HG01109.hp1 HG01891.hp1 others(8): Show |
a0001a0002a0003 | a0001c0001a0002c0003a0003c0006 | a0001c0001t0009a0001c0001t0014a0001c0001t0037others(8): Show | a0001c0001t0009g0166 a0001c0001t0014g0009 a0001c0001t0037g0030 others(8): Show |
11 | 174 | 0.0632 | -6 | c.*8+ others(23): Show |
TSHZ2 | ENSG00000182463.17 | transcript | ENST00000371497.10 | protein_coding | 2/2 | INFO_REALIGN_3_PRIME | chr20 | TogoVar | ||||||
TSHZ2_chr20_52967358_53500330 | 53378341 | AAATAAT | A | intron_variant | MODIFIER | HG01192.hp1 HG01891.hp1 HG02055.hp1 others(9): Show |
a0001a0002a0003others(1): Show | a0001c0001a0001c0011a0002c0003others(2): Show | a0001c0001t0002a0001c0001t0017a0001c0001t0032others(8): Show | a0001c0001t0002g0057 a0001c0001t0017g0083 a0001c0001t0032g0134 others(9): Show |
12 | 56 | 0.2143 | -6 | c.*9- others(25): Show |
TSHZ2 | ENSG00000182463.17 | transcript | ENST00000371497.10 | protein_coding | 2/2 | INFO_REALIGN_3_PRIME | chr20 | TogoVar | ||||||
TSHZ2_chr20_52967358_53500330 | 53383276 | AAAAAAG | A | intron_variant | MODIFIER | HG00621.hp2 HG01074.hp1 HG01106.hp2 others(28): Show |
a0001a0002a0004others(2): Show | a0001c0001a0001c0002a0001c0009others(6): Show | a0001c0001t0001a0001c0001t0002a0001c0001t0006others(24): Show | a0001c0001t0001g0064 a0001c0001t0001g0093 a0001c0001t0002g0117 others(28): Show |
31 | 174 | 0.1782 | -6 | c.*9- others(25): Show |
TSHZ2 | ENSG00000182463.17 | transcript | ENST00000371497.10 | protein_coding | 2/2 | INFO_REALIGN_3_PRIME | chr20 | TogoVar | ||||||
TSHZ2_chr20_52967358_53500330 | 53398939 | CAATAAT | C | intron_variant | MODIFIER | HG01074.hp2 HG01169.hp1 HG03130.hp2 others(1): Show |
a0001 | a0001c0001a0001c0002 | a0001c0001t0006a0001c0001t0022a0001c0002t0002 | a0001c0001t0006g0088 a0001c0001t0022g0145 a0001c0002t0002g0040 others(1): Show |
4 | 174 | 0.0230 | -6 | c.*9- others(23): Show |
TSHZ2 | ENSG00000182463.17 | transcript | ENST00000371497.10 | protein_coding | 2/2 | INFO_REALIGN_3_PRIME | chr20 | TogoVar | ||||||
TSHZ2_chr20_52967358_53500330 | 53410587 | CATTATT | C | intron_variant | MODIFIER | HG02723.hp2 HG02818.hp2 |
a0001a0002 | a0001c0011a0002c0003 | a0001c0011t0035a0002c0003t0058 | a0001c0011t0035g0174 a0002c0003t0058g0006 |
2 | 52 | 0.0385 | -6 | c.*9- others(23): Show |
TSHZ2 | ENSG00000182463.17 | transcript | ENST00000371497.10 | protein_coding | 2/2 | INFO_REALIGN_3_PRIME | chr20 | TogoVar | ||||||
TSHZ2_chr20_52967358_53500330 | 53433584 | GACACAC | G | intron_variant | MODIFIER | HG02040.hp2 HG02257.hp1 |
a0001 | a0001c0001a0001c0012 | a0001c0001t0004a0001c0012t0008 | a0001c0001t0004g0113 a0001c0012t0008g0096 |
2 | 46 | 0.0435 | -6 | c.*9- others(23): Show |
TSHZ2 | ENSG00000182463.17 | transcript | ENST00000371497.10 | protein_coding | 2/2 | INFO_REALIGN_3_PRIME | chr20 | TogoVar | ||||||
TSHZ2_chr20_52967358_53500330 | 53441224 | TATTTTA | T | intron_variant | MODIFIER | HG00544.hp1 HG02040.hp2 HG02257.hp1 others(19): Show |
a0001a0002a0004 | a0001c0001a0001c0002a0001c0012others(3): Show | a0001c0001t0001a0001c0001t0002a0001c0001t0004others(13): Show | a0001c0001t0001g0148 a0001c0001t0001g0154 a0001c0001t0002g0115 others(19): Show |
22 | 171 | 0.1287 | -6 | c.*9- others(23): Show |
TSHZ2 | ENSG00000182463.17 | transcript | ENST00000371497.10 | protein_coding | 2/2 | chr20 | TogoVar | |||||||
TSHZ2_chr20_52967358_53500330 | 53469045 | TTATATA | T | intron_variant | MODIFIER | HG02886.hp1 HG03041.hp2 HG03453.hp1 others(1): Show |
a0001a0004 | a0001c0001a0004c0004 | a0001c0001t0001a0001c0001t0043a0004c0004t0005 | a0001c0001t0001g0148 a0001c0001t0001g0154 a0001c0001t0043g0169 others(1): Show |
4 | 21 | 0.1905 | -6 | c.*9- others(23): Show |
TSHZ2 | ENSG00000182463.17 | transcript | ENST00000371497.10 | protein_coding | 2/2 | INFO_REALIGN_3_PRIME | chr20 | TogoVar | ||||||
TSHZ2_chr20_52967358_53500330 | 53487272 | CAAAAAA | C | 3_prime_UTR_variant | MODIFIER | HG00621.hp1 HG00673.hp1 HG01099.hp2 others(38): Show |
a0001a0002a0004others(1): Show | a0001c0001a0001c0002a0001c0011others(3): Show | a0001c0001t0001a0001c0001t0005a0001c0001t0022others(18): Show | a0001c0001t0001g0034 a0001c0001t0001g0035 a0001c0001t0001g0055 others(38): Show |
41 | 74 | 0.5541 | -6 | c.*15 others(15): Show |
TSHZ2 | ENSG00000182463.17 | transcript | ENST00000371497.10 | protein_coding | 3/3 | 230725 | INFO_REALIGN_3_PRIME | chr20 | TogoVar | |||||
TSHZ3_chr19_31269945_31354436 | 31323863 | AACACAC | A | intron_variant | MODIFIER | HG00609.hp1 HG00642.hp1 HG00642.hp2 others(50): Show |
a0001a0002a0003others(2): Show | a0001c0001a0001c0002a0001c0003others(8): Show | a0001c0001t0001a0001c0001t0002a0001c0002t0001others(15): Show | a0001c0001t0001g0065 a0001c0001t0002g0070 a0001c0001t0002g0071 others(49): Show |
53 | 92 | 0.5761 | -6 | c.40+ others(23): Show |
TSHZ3 | ENSG00000121297.8 | transcript | ENST00000240587.5 | protein_coding | 1/1 | chr19 | TogoVar | |||||||
TSHZ3_chr19_31269945_31354436 | 31340338 | CAAAAAA | C | intron_variant | MODIFIER | HG01884.hp1 HG02257.hp1 HG02451.hp2 others(9): Show |
a0001a0002 | a0001c0001a0001c0002a0001c0004others(2): Show | a0001c0001t0001a0001c0001t0003a0001c0002t0001others(3): Show | a0001c0001t0001g0141 a0001c0001t0003g0138 a0001c0001t0003g0139 others(9): Show |
12 | 69 | 0.1739 | -6 | c.40+ others(21): Show |
TSHZ3 | ENSG00000121297.8 | transcript | ENST00000240587.5 | protein_coding | 1/1 | chr19 | TogoVar | |||||||
TSHZ3_chr19_31269945_31354436 | 31341627 | TCTGACA | T | intron_variant | MODIFIER | HG02965.hp1 HG03516.hp2 NA18955.hp2 |
a0001 | a0001c0003a0001c0004 | a0001c0003t0001a0001c0004t0006 | a0001c0003t0001g0265 a0001c0004t0006g0012 a0001c0004t0006g0013 |
3 | 338 | 0.0089 | -6 | c.40+ others(21): Show |
TSHZ3 | ENSG00000121297.8 | transcript | ENST00000240587.5 | protein_coding | 1/1 | chr19 | TogoVar | |||||||
TSHZ3_chr19_31269945_31354436 | 31341629 | TGACACA | T | intron_variant | MODIFIER | HG03130.hp1 HG03453.hp2 NA18522.hp2 |
a0001 | a0001c0006a0001c0007 | a0001c0006t0001a0001c0007t0001 | a0001c0006t0001g0152 a0001c0007t0001g0021 a0001c0007t0001g0156 |
3 | 337 | 0.0089 | -6 | c.40+ others(21): Show |
TSHZ3 | ENSG00000121297.8 | transcript | ENST00000240587.5 | protein_coding | 1/1 | chr19 | TogoVar | |||||||
TSHZ3_chr19_31269945_31354436 | 31341630 | GACACAC | G | intron_variant | MODIFIER | HG00609.hp1 HG01069.hp2 HG01074.hp1 others(33): Show |
a0001a0008 | a0001c0001a0001c0002a0001c0003others(7): Show | a0001c0001t0001a0001c0001t0002a0001c0002t0001others(14): Show | a0001c0001t0001g0205 a0001c0001t0002g0184 a0001c0001t0002g0214 others(32): Show |
36 | 100 | 0.3600 | -6 | c.40+ others(21): Show |
TSHZ3 | ENSG00000121297.8 | transcript | ENST00000240587.5 | protein_coding | 1/1 | chr19 | TogoVar | |||||||
TSNARE1_chr8_142207080_142408182 | 142255914 | CCACCAT | C | intron_variant | MODIFIER | HG00423.hp1 HG00438.hp2 HG00544.hp2 others(64): Show |
a0001a0002a0003others(2): Show | a0001c0001a0002c0002a0002c0013others(4): Show | a0001c0001t0001a0001c0001t0002a0001c0001t0003others(12): Show | a0001c0001t0001g0008 a0001c0001t0001g0015 a0001c0001t0001g0020 others(64): Show |
67 | 234 | 0.2863 | -6 | c.144 others(27): Show |
TSNARE1 | ENSG00000171045.16 | transcript | ENST00000524325.6 | protein_coding | 12/13 | chr8 | TogoVar | |||||||
TSNARE1_chr8_142207080_142408182 | 142256073 | TCACCAC | T | intron_variant | MODIFIER | HG00099.hp1 HG00140.hp2 HG00408.hp1 others(90): Show |
a0001a0002a0003others(8): Show | a0001c0001a0002c0002a0003c0003others(9): Show | a0001c0001t0001a0001c0001t0002a0001c0001t0003others(21): Show | a0001c0001t0001g0001 a0001c0001t0001g0010 a0001c0001t0001g0014 others(89): Show |
93 | 230 | 0.4043 | -6 | c.144 others(27): Show |
TSNARE1 | ENSG00000171045.16 | transcript | ENST00000524325.6 | protein_coding | 12/13 | chr8 | TogoVar | |||||||
TSNARE1_chr8_142207080_142408182 | 142310034 | TTTTTTA | T | intron_variant | MODIFIER | HG01109.hp1 HG02145.hp2 HG02257.hp1 others(15): Show |
a0001a0002a0005 | a0001c0001a0002c0002a0005c0005 | a0001c0001t0001a0001c0001t0002a0002c0002t0001others(3): Show | a0001c0001t0001g0023 a0001c0001t0001g0037 a0001c0001t0001g0044 others(15): Show |
18 | 236 | 0.0763 | -6 | c.113 others(25): Show |
TSNARE1 | ENSG00000171045.16 | transcript | ENST00000524325.6 | protein_coding | 9/13 | chr8 | TogoVar | |||||||
TSNARE1_chr8_142207080_142408182 | 142365631 | CACAGAG | C | intron_variant | MODIFIER | HG01496.hp2 HG02040.hp1 HG02083.hp1 others(6): Show |
a0005a0006 | a0005c0009a0006c0006 | a0005c0009t0001a0006c0006t0001a0006c0006t0002 | a0005c0009t0001g0233 a0006c0006t0001g0159 a0006c0006t0001g0160 others(6): Show |
9 | 234 | 0.0385 | -6 | c.-39 others(25): Show |
TSNARE1 | ENSG00000171045.16 | transcript | ENST00000524325.6 | protein_coding | 1/13 | chr8 | TogoVar | |||||||
TSNAX_chr1_231523669_231571524 | 231545079 | CTTAAAG | C | intron_variant | MODIFIER | HG00099.hp1 HG00140.hp2 HG00323.hp1 others(51): Show |
a0001a0002 | a0001c0001a0002c0003 | a0001c0001t0001a0001c0001t0007a0001c0001t0012others(1): Show | a0001c0001t0001g0006 a0001c0001t0001g0007 a0001c0001t0001g0019 others(44): Show |
54 | 390 | 0.1385 | -6 | c.367 others(23): Show |
TSNAX | ENSG00000116918.15 | transcript | ENST00000366639.9 | protein_coding | 4/5 | INFO_REALIGN_3_PRIME | chr1 | TogoVar | ||||||
TSN_chr2_121750651_121772853 | 121762675 | GTGTCTT | G | intron_variant | MODIFIER | HG02257.hp2 HG02647.hp1 HG02717.hp1 others(8): Show |
a0001 | a0001c0001 | a0001c0001t0004 | a0001c0001t0004g0015 a0001c0001t0004g0016 a0001c0001t0004g0023 others(3): Show |
11 | 388 | 0.0284 | -6 | c.374 others(21): Show |
TSN | ENSG00000211460.12 | transcript | ENST00000389682.8 | protein_coding | 4/5 | INFO_REALIGN_3_PRIME | chr2 | TogoVar | ||||||
TSPAN10_chr17_81632196_81653749 | 81642995 | TTATATA | T | intron_variant | MODIFIER | HG00408.hp2 HG02109.hp2 HG02523.hp2 others(6): Show |
a0001a0002 | a0001c0001a0002c0002 | a0001c0001t0001a0001c0001t0010a0002c0002t0002 | a0001c0001t0001g0027 a0001c0001t0001g0049 a0001c0001t0001g0059 others(5): Show |
9 | 58 | 0.1552 | -6 | c.36+ others(19): Show |
TSPAN10 | ENSG00000182612.11 | transcript | ENST00000611590.2 | protein_coding | 2/3 | INFO_REALIGN_3_PRIME | chr17 | TogoVar |