view | regionname | pos | ref | alt | annotation | impact | samples | ahapids | chapids | thapids | thapids | ac | an | af | len | hgvs_c | hgvs_p | genename | geneid | featuretype | featureid | transcript_biotype | rank | cdna cdna pos length
|
cds cds pos length
|
aa aa pos length
|
distance | status | chr | external |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
VPS35L_chr16_19550703_19706163 | 19594644 | CAAAAAA | C | intron_variant | MODIFIER | HG02630.hp1 HG02647.hp1 HG02886.hp1 others(3): Show |
a0001 | a0001c0001a0001c0002 | a0001c0001t0001a0001c0002t0001a0001c0002t0002 | a0001c0001t0001g0003 a0001c0001t0001g0015 a0001c0002t0001g0046 others(3): Show |
6 | 134 | 0.0448 | -6 | c.724 others(23): Show |
VPS35L | ENSG00000103544.17 | transcript | ENST00000417362.7 | protein_coding | 8/30 | INFO_REALIGN_3_PRIME | chr16 | TogoVar | ||||||
VPS35L_chr16_19550703_19706163 | 19623766 | TTTATTA | T | intron_variant | MODIFIER | HG00323.hp1 HG00323.hp2 HG00408.hp2 others(9): Show |
a0001a0006 | a0001c0001a0001c0013a0006c0010 | a0001c0001t0001a0001c0013t0003a0006c0010t0001 | a0001c0001t0001g0130 a0001c0001t0001g0141 a0001c0001t0001g0147 others(9): Show |
12 | 207 | 0.0580 | -6 | c.122 others(25): Show |
VPS35L | ENSG00000103544.17 | transcript | ENST00000417362.7 | protein_coding | 14/30 | INFO_REALIGN_3_PRIME | chr16 | TogoVar | ||||||
VPS35L_chr16_19550703_19706163 | 19623811 | ATTATTG | A | intron_variant | MODIFIER | HG00140.hp1 HG00609.hp1 HG00741.hp2 others(34): Show |
a0001 | a0001c0001a0001c0002a0001c0003others(3): Show | a0001c0001t0001a0001c0001t0002a0001c0002t0001others(6): Show | a0001c0001t0001g0015 a0001c0001t0001g0050 a0001c0001t0001g0054 others(34): Show |
37 | 282 | 0.1312 | -6 | c.122 others(25): Show |
VPS35L | ENSG00000103544.17 | transcript | ENST00000417362.7 | protein_coding | 14/30 | INFO_REALIGN_3_PRIME | chr16 | TogoVar | ||||||
VPS35_chr16_46651132_46694178 | 46681032 | TACACAC | T | intron_variant | MODIFIER | HG02970.hp1 HG03225.hp1 NA19043.hp1 |
a0001 | a0001c0002 | a0001c0002t0008 | a0001c0002t0008g0159 a0001c0002t0008g0160 a0001c0002t0008g0161 |
3 | 29 | 0.1034 | -6 | c.324 others(21): Show |
VPS35 | ENSG00000069329.19 | transcript | ENST00000299138.12 | protein_coding | 4/16 | chr16 | TogoVar | |||||||
VPS37A_chr8_17241958_17303024 | 17277861 | TACACAC | T | intron_variant | MODIFIER | HG01361.hp1 HG02258.hp1 HG03130.hp2 others(1): Show |
a0001 | a0001c0001 | a0001c0001t0005a0001c0001t0011a0001c0001t0017 | a0001c0001t0005g0041 a0001c0001t0011g0126 a0001c0001t0011g0197 others(1): Show |
4 | 116 | 0.0345 | -6 | c.713 others(23): Show |
VPS37A | ENSG00000155975.10 | transcript | ENST00000324849.9 | protein_coding | 6/11 | INFO_REALIGN_3_PRIME | chr8 | TogoVar | ||||||
VPS37B_chr12_122860330_122901124 | 122864109 | GCCCCCC | G | downstream_gene_variant | MODIFIER | HG02040.hp2 HG02055.hp1 HG02602.hp2 others(10): Show |
a0001 | a0001c0001a0001c0003 | a0001c0001t0001a0001c0001t0002a0001c0001t0010others(2): Show | a0001c0001t0001g0003 a0001c0001t0001g0051 a0001c0001t0001g0060 others(8): Show |
13 | 31 | 0.4194 | -6 | c.*30 others(17): Show |
VPS37B | ENSG00000139722.7 | transcript | ENST00000267202.7 | protein_coding | 1220 | chr12 | TogoVar | |||||||
VPS37B_chr12_122860330_122901124 | 122874947 | CAAAAAA | C | intron_variant | MODIFIER | HG02280.hp2 HG02451.hp1 HG02717.hp1 others(4): Show |
a0001 | a0001c0001a0001c0004 | a0001c0001t0003a0001c0004t0003 | a0001c0001t0003g0010 a0001c0001t0003g0195 a0001c0001t0003g0197 others(2): Show |
7 | 9 | 0.7778 | -6 | c.112 others(23): Show |
VPS37B | ENSG00000139722.7 | transcript | ENST00000267202.7 | protein_coding | 1/3 | chr12 | TogoVar | |||||||
VPS37B_chr12_122860330_122901124 | 122893823 | CAAAAAA | C | intron_variant | MODIFIER | HG00323.hp2 HG00423.hp2 HG00438.hp2 others(73): Show |
a0001 | a0001c0001 | a0001c0001t0001a0001c0001t0002a0001c0001t0004others(5): Show | a0001c0001t0001g0001 a0001c0001t0001g0002 a0001c0001t0001g0008 others(50): Show |
76 | 94 | 0.8085 | -6 | c.111 others(23): Show |
VPS37B | ENSG00000139722.7 | transcript | ENST00000267202.7 | protein_coding | 1/3 | chr12 | TogoVar | |||||||
VPS37C_chr11_61125257_61166426 | 61143362 | ATTTTTT | A | intron_variant | MODIFIER | HG00639.hp2 HG00741.hp1 HG00741.hp2 others(32): Show |
a0001a0002a0004others(1): Show | a0001c0001a0002c0002a0004c0004others(1): Show | a0001c0001t0001a0001c0001t0002a0001c0001t0006others(6): Show | a0001c0001t0001g0026 a0001c0001t0001g0033 a0001c0001t0001g0037 others(31): Show |
35 | 46 | 0.7609 | -6 | c.-6- others(21): Show |
VPS37C | ENSG00000167987.11 | transcript | ENST00000301765.10 | protein_coding | 1/4 | chr11 | TogoVar | |||||||
VPS41_chr7_38717974_38914191 | 38720546 | ATGTGTG | A | downstream_gene_variant | MODIFIER | HG02258.hp2 HG03195.hp1 NA21309.hp2 |
a0001 | a0001c0002a0001c0003a0001c0009 | a0001c0002t0004a0001c0003t0059a0001c0009t0010 | a0001c0002t0004g0118 a0001c0003t0059g0270 a0001c0009t0010g0178 |
3 | 234 | 0.0128 | -6 | c.*56 others(17): Show |
VPS41 | ENSG00000006715.16 | transcript | ENST00000310301.9 | protein_coding | 2427 | chr7 | TogoVar | |||||||
VPS41_chr7_38717974_38914191 | 38720562 | GTATATA | G | downstream_gene_variant | MODIFIER | HG00280.hp2 HG01981.hp2 HG02148.hp1 others(1): Show |
a0001 | a0001c0001a0001c0002 | a0001c0001t0001a0001c0001t0005a0001c0002t0033 | a0001c0001t0001g0023 a0001c0001t0005g0039 a0001c0002t0033g0168 others(1): Show |
4 | 175 | 0.0229 | -6 | c.*56 others(17): Show |
VPS41 | ENSG00000006715.16 | transcript | ENST00000310301.9 | protein_coding | 2411 | chr7 | TogoVar | |||||||
VPS41_chr7_38717974_38914191 | 38723723 | CAAAAAA | C | 3_prime_UTR_variant | MODIFIER | HG02165.hp1 HG02280.hp1 HG03225.hp2 others(4): Show |
a0001 | a0001c0001a0001c0007 | a0001c0001t0012a0001c0001t0058a0001c0007t0035 | a0001c0001t0012g0210 a0001c0001t0012g0239 a0001c0001t0012g0258 others(4): Show |
7 | 78 | 0.0897 | -6 | c.*25 others(17): Show |
VPS41 | ENSG00000006715.16 | transcript | ENST00000310301.9 | protein_coding | 29/29 | 2517 | chr7 | TogoVar | ||||||
VPS41_chr7_38717974_38914191 | 38756213 | TACACAC | T | intron_variant | MODIFIER | HG00099.hp2 HG00140.hp1 HG00280.hp2 others(30): Show |
a0001 | a0001c0001a0001c0003 | a0001c0001t0001a0001c0001t0004a0001c0001t0009others(5): Show | a0001c0001t0001g0001 a0001c0001t0001g0002 a0001c0001t0001g0007 others(27): Show |
33 | 104 | 0.3173 | -6 | c.169 others(23): Show |
VPS41 | ENSG00000006715.16 | transcript | ENST00000310301.9 | protein_coding | 19/28 | chr7 | TogoVar | |||||||
VPS41_chr7_38717974_38914191 | 38860697 | TTGTGTG | T | intron_variant | MODIFIER | HG02280.hp1 HG02738.hp2 HG03017.hp1 others(5): Show |
a0001 | a0001c0001a0001c0002a0001c0003 | a0001c0001t0003a0001c0001t0007a0001c0001t0009others(5): Show | a0001c0001t0003g0226 a0001c0001t0007g0204 a0001c0001t0009g0179 others(5): Show |
8 | 25 | 0.3200 | -6 | c.246 others(23): Show |
VPS41 | ENSG00000006715.16 | transcript | ENST00000310301.9 | protein_coding | 4/28 | chr7 | TogoVar | |||||||
VPS45_chr1_150062776_150150329 | 150063016 | GACTTAT | G | upstream_gene_variant | MODIFIER | HG01884.hp1 HG01891.hp2 HG02258.hp1 others(16): Show |
a0001a0002 | a0001c0001a0002c0002 | a0001c0001t0001a0002c0002t0001a0002c0002t0002 | a0001c0001t0001g0003 a0001c0001t0001g0004 a0001c0001t0001g0089 others(14): Show |
19 | 174 | 0.1092 | -6 | c.-48 others(17): Show |
VPS45 | ENSG00000136631.16 | transcript | ENST00000644510.2 | protein_coding | 4759 | chr1 | TogoVar | |||||||
VPS45_chr1_150062776_150150329 | 150140386 | GGTGTGT | G | intron_variant | MODIFIER | HG02109.hp1 HG03041.hp2 |
a0001 | a0001c0001 | a0001c0001t0001 | a0001c0001t0001g0059 a0001c0001t0001g0141 |
2 | 49 | 0.0408 | -6 | c.162 others(25): Show |
VPS45 | ENSG00000136631.16 | transcript | ENST00000644510.2 | protein_coding | 14/14 | INFO_REALIGN_3_PRIME | chr1 | TogoVar | ||||||
VPS4A_chr16_69306350_69331939 | 69318787 | GCCGGGC | G | intron_variant | MODIFIER | HG00673.hp2 HG01993.hp2 HG02055.hp1 others(6): Show |
a0001 | a0001c0001a0001c0002 | a0001c0001t0001a0001c0002t0006a0001c0002t0007 | a0001c0001t0001g0038 a0001c0001t0001g0172 a0001c0001t0001g0173 others(5): Show |
9 | 364 | 0.0247 | -6 | c.344 others(19): Show |
VPS4A | ENSG00000132612.16 | transcript | ENST00000254950.13 | protein_coding | 4/10 | INFO_REALIGN_3_PRIME | chr16 | TogoVar | ||||||
VPS4A_chr16_69306350_69331939 | 69331453 | CAAAAAA | C | downstream_gene_variant | MODIFIER | HG00099.hp2 HG00280.hp1 HG00621.hp1 others(47): Show |
a0001 | a0001c0001a0001c0002 | a0001c0001t0001a0001c0001t0003a0001c0002t0002others(7): Show | a0001c0001t0001g0035 a0001c0001t0003g0015 a0001c0001t0003g0016 others(31): Show |
50 | 239 | 0.2092 | -6 | c.*71 others(17): Show |
VPS4A | ENSG00000132612.16 | transcript | ENST00000254950.13 | protein_coding | 4515 | chr16 | TogoVar | |||||||
VPS50_chr7_93227366_93366123 | 93240245 | ACACACT | A | intron_variant | MODIFIER | HG02886.hp1 HG03453.hp2 HG03516.hp1 |
a0001a0003 | a0001c0002a0003c0007 | a0001c0002t0007a0003c0007t0002a0003c0007t0020 | a0001c0002t0007g0302 a0003c0007t0002g0305 a0003c0007t0020g0303 |
3 | 310 | 0.0097 | -6 | c.102 others(21): Show |
VPS50 | ENSG00000004766.17 | transcript | ENST00000305866.10 | protein_coding | 2/27 | INFO_REALIGN_3_PRIME | chr7 | TogoVar | ||||||
VPS50_chr7_93227366_93366123 | 93240249 | ACTCTCT | A | intron_variant | MODIFIER | HG01891.hp1 HG02630.hp2 HG02647.hp1 others(2): Show |
a0001 | a0001c0001a0001c0002 | a0001c0001t0001a0001c0002t0001a0001c0002t0014 | a0001c0001t0001g0246 a0001c0001t0001g0248 a0001c0002t0001g0245 others(2): Show |
5 | 232 | 0.0216 | -6 | c.102 others(21): Show |
VPS50 | ENSG00000004766.17 | transcript | ENST00000305866.10 | protein_coding | 2/27 | INFO_REALIGN_3_PRIME | chr7 | TogoVar | ||||||
VPS50_chr7_93227366_93366123 | 93308118 | AGATGAT | A | intron_variant | MODIFIER | HG00423.hp1 HG00558.hp1 HG00609.hp1 others(102): Show |
a0001a0002 | a0001c0001a0001c0002a0001c0012others(1): Show | a0001c0001t0001a0001c0001t0002a0001c0001t0003others(15): Show | a0001c0001t0001g0003 a0001c0001t0001g0011 a0001c0001t0001g0014 others(101): Show |
105 | 216 | 0.4861 | -6 | c.163 others(23): Show |
VPS50 | ENSG00000004766.17 | transcript | ENST00000305866.10 | protein_coding | 18/27 | INFO_REALIGN_3_PRIME | chr7 | TogoVar | ||||||
VPS52_chr6_33245278_33276876 | 33245913 | TCACACA | T | downstream_gene_variant | MODIFIER | HG00642.hp2 HG01081.hp2 HG02258.hp1 others(2): Show |
a0001 | a0001c0001a0001c0004a0001c0005 | a0001c0001t0002a0001c0004t0001a0001c0005t0003 | a0001c0001t0002g0021 a0001c0004t0001g0131 a0001c0004t0001g0137 others(1): Show |
5 | 101 | 0.0495 | -6 | c.*49 others(17): Show |
VPS52 | ENSG00000223501.9 | transcript | ENST00000445902.3 | protein_coding | 4364 | chr6 | TogoVar | |||||||
VPS52_chr6_33245278_33276876 | 33247230 | CTTTTTT | C | downstream_gene_variant | MODIFIER | HG01192.hp2 HG01243.hp1 HG02258.hp2 others(11): Show |
a0001 | a0001c0003a0001c0005a0001c0006 | a0001c0003t0003a0001c0005t0003a0001c0006t0003 | a0001c0003t0003g0038 a0001c0003t0003g0039 a0001c0003t0003g0226 others(9): Show |
14 | 112 | 0.1250 | -6 | c.*36 others(17): Show |
VPS52 | ENSG00000223501.9 | transcript | ENST00000445902.3 | protein_coding | 3047 | chr6 | TogoVar | |||||||
VPS52_chr6_33245278_33276876 | 33256463 | CAAAAAA | C | intron_variant | MODIFIER | HG01993.hp1 NA18966.hp2 NA19002.hp1 others(4): Show |
a0001 | a0001c0001 | a0001c0001t0002 | a0001c0001t0002g0040 a0001c0001t0002g0043 a0001c0001t0002g0045 others(4): Show |
7 | 49 | 0.1429 | -6 | c.179 others(25): Show |
VPS52 | ENSG00000223501.9 | transcript | ENST00000445902.3 | protein_coding | 17/19 | chr6 | TogoVar | |||||||
VPS53_chr17_503668_719839 | 546329 | TCACACA | T | intron_variant | MODIFIER | HG01106.hp2 HG01109.hp1 HG01255.hp2 others(10): Show |
a0001a0006a0007 | a0001c0001a0001c0002a0001c0007others(3): Show | a0001c0001t0036a0001c0001t0037a0001c0001t0081others(10): Show | a0001c0001t0036g0114 a0001c0001t0037g0162 a0001c0001t0081g0046 others(10): Show |
13 | 38 | 0.3421 | -6 | c.186 others(25): Show |
VPS53 | ENSG00000141252.21 | transcript | ENST00000437048.7 | protein_coding | 17/21 | chr17 | TogoVar | |||||||
VPS53_chr17_503668_719839 | 599770 | AAAAAAC | A | intron_variant | MODIFIER | HG02135.hp2 HG02602.hp1 NA18747.hp1 others(5): Show |
a0001 | a0001c0005 | a0001c0005t0010a0001c0005t0021a0001c0005t0044others(4): Show | a0001c0005t0010g0007 a0001c0005t0010g0008 a0001c0005t0021g0006 others(5): Show |
8 | 230 | 0.0348 | -6 | c.121 others(25): Show |
VPS53 | ENSG00000141252.21 | transcript | ENST00000437048.7 | protein_coding | 12/21 | chr17 | TogoVar | |||||||
VPS53_chr17_503668_719839 | 610127 | TCACACA | T | intron_variant | MODIFIER | HG00099.hp1 HG00099.hp2 HG01081.hp1 others(27): Show |
a0001a0002 | a0001c0001a0001c0002a0001c0005others(2): Show | a0001c0001t0002a0001c0001t0033a0001c0001t0034others(21): Show | a0001c0001t0002g0210 a0001c0001t0033g0119 a0001c0001t0033g0120 others(27): Show |
30 | 32 | 0.9375 | -6 | c.111 others(25): Show |
VPS53 | ENSG00000141252.21 | transcript | ENST00000437048.7 | protein_coding | 11/21 | chr17 | TogoVar | |||||||
VPS53_chr17_503668_719839 | 629809 | CCACACA | C | intron_variant | MODIFIER | HG00140.hp2 HG00280.hp1 HG00323.hp1 others(69): Show |
a0001a0002 | a0001c0001a0001c0002a0001c0007others(1): Show | a0001c0001t0002a0001c0001t0011a0001c0001t0015others(39): Show | a0001c0001t0002g0121 a0001c0001t0002g0128 a0001c0001t0002g0133 others(69): Show |
72 | 81 | 0.8889 | -6 | c.688 others(23): Show |
VPS53 | ENSG00000141252.21 | transcript | ENST00000437048.7 | protein_coding | 8/21 | chr17 | TogoVar | |||||||
VPS53_chr17_503668_719839 | 656700 | ATGTGTG | A | intron_variant | MODIFIER | HG00099.hp2 HG00140.hp2 HG00280.hp1 others(46): Show |
a0001 | a0001c0002a0001c0006a0001c0016 | a0001c0002t0001a0001c0002t0003a0001c0002t0005others(29): Show | a0001c0002t0001g0045 a0001c0002t0001g0056 a0001c0002t0001g0066 others(46): Show |
49 | 52 | 0.9423 | -6 | c.373 others(21): Show |
VPS53 | ENSG00000141252.21 | transcript | ENST00000437048.7 | protein_coding | 5/21 | chr17 | TogoVar | |||||||
VPS53_chr17_503668_719839 | 662832 | AGAAAGG | A | intron_variant | MODIFIER | HG00140.hp2 HG00280.hp1 HG00280.hp2 others(41): Show |
a0001a0002 | a0001c0001a0001c0002a0001c0006others(2): Show | a0001c0001t0113a0001c0002t0001a0001c0002t0003others(28): Show | a0001c0001t0113g0230 a0001c0002t0001g0056 a0001c0002t0001g0066 others(41): Show |
44 | 230 | 0.1913 | -6 | c.286 others(21): Show |
VPS53 | ENSG00000141252.21 | transcript | ENST00000437048.7 | protein_coding | 4/21 | chr17 | TogoVar | |||||||
VPS53_chr17_503668_719839 | 672109 | GACACAC | G | intron_variant | MODIFIER | HG00621.hp2 HG00741.hp1 HG01106.hp2 others(10): Show |
a0001a0002 | a0001c0001a0001c0002a0002c0003 | a0001c0001t0018a0001c0001t0036a0001c0001t0037others(10): Show | a0001c0001t0018g0158 a0001c0001t0036g0204 a0001c0001t0037g0162 others(10): Show |
13 | 29 | 0.4483 | -6 | c.286 others(25): Show |
VPS53 | ENSG00000141252.21 | transcript | ENST00000437048.7 | protein_coding | 4/21 | chr17 | TogoVar | |||||||
VPS53_chr17_503668_719839 | 672175 | ATCTCTC | A | intron_variant | MODIFIER | HG00621.hp1 HG01167.hp1 HG02040.hp2 others(19): Show |
a0001a0002a0003others(1): Show | a0001c0001a0001c0005a0002c0003others(3): Show | a0001c0001t0002a0001c0001t0036a0001c0001t0098others(16): Show | a0001c0001t0002g0133 a0001c0001t0002g0134 a0001c0001t0002g0141 others(19): Show |
22 | 32 | 0.6875 | -6 | c.286 others(25): Show |
VPS53 | ENSG00000141252.21 | transcript | ENST00000437048.7 | protein_coding | 4/21 | chr17 | TogoVar | |||||||
VPS54_chr2_63887150_64024428 | 63896824 | ATATCTT | A | intron_variant | MODIFIER | HG00735.hp2 HG01934.hp2 NA18941.hp2 others(2): Show |
a0001 | a0001c0001 | a0001c0001t0002 | a0001c0001t0002g0193 a0001c0001t0002g0202 a0001c0001t0002g0213 others(2): Show |
5 | 302 | 0.0166 | -6 | c.282 others(23): Show |
VPS54 | ENSG00000143952.20 | transcript | ENST00000272322.9 | protein_coding | 22/22 | chr2 | TogoVar | |||||||
VPS54_chr2_63887150_64024428 | 63985677 | TTATACA | T | intron_variant | MODIFIER | HG02145.hp1 HG02559.hp2 HG02630.hp2 others(7): Show |
a0003 | a0003c0005 | a0003c0005t0001a0003c0005t0006 | a0003c0005t0001g0005 a0003c0005t0001g0007 a0003c0005t0001g0009 others(7): Show |
10 | 300 | 0.0333 | -6 | c.-20 others(23): Show |
VPS54 | ENSG00000143952.20 | transcript | ENST00000272322.9 | protein_coding | 1/22 | chr2 | TogoVar | |||||||
VPS54_chr2_63887150_64024428 | 63985680 | TACACAC | T | intron_variant | MODIFIER | HG02055.hp2 HG02109.hp2 HG02486.hp2 others(16): Show |
a0001 | a0001c0001a0001c0003a0001c0004 | a0001c0001t0002a0001c0001t0007a0001c0003t0003others(1): Show | a0001c0001t0002g0044 a0001c0001t0002g0238 a0001c0001t0007g0159 others(16): Show |
19 | 117 | 0.1624 | -6 | c.-20 others(23): Show |
VPS54 | ENSG00000143952.20 | transcript | ENST00000272322.9 | protein_coding | 1/22 | chr2 | TogoVar | |||||||
VPS54_chr2_63887150_64024428 | 64012700 | AAAAAAG | A | intron_variant | MODIFIER | HG02145.hp1 HG02559.hp2 HG02630.hp2 others(8): Show |
a0003 | a0003c0005 | a0003c0005t0001a0003c0005t0006a0003c0005t0009 | a0003c0005t0001g0005 a0003c0005t0001g0007 a0003c0005t0001g0009 others(8): Show |
11 | 302 | 0.0364 | -6 | c.-21 others(23): Show |
VPS54 | ENSG00000143952.20 | transcript | ENST00000272322.9 | protein_coding | 1/22 | chr2 | TogoVar | |||||||
VPS54_chr2_63887150_64024428 | 64017053 | TGGGCCG | T | intron_variant | MODIFIER | HG00280.hp1 HG00639.hp1 HG00733.hp2 others(26): Show |
a0001a0002 | a0001c0001a0001c0003a0002c0006 | a0001c0001t0001a0001c0001t0003a0001c0003t0001others(3): Show | a0001c0001t0001g0014 a0001c0001t0003g0282 a0001c0003t0001g0180 others(26): Show |
29 | 301 | 0.0963 | -6 | c.-21 others(23): Show |
VPS54 | ENSG00000143952.20 | transcript | ENST00000272322.9 | protein_coding | 1/22 | chr2 | TogoVar | |||||||
VPS72_chr1_151171304_151195197 | 151172811 | GTTGTTT | G | downstream_gene_variant | MODIFIER | HG02451.hp1 HG03225.hp1 HG03453.hp2 |
a0001 | a0001c0001 | a0001c0001t0001 | a0001c0001t0001g0019 | 3 | 406 | 0.0074 | -6 | c.*38 others(17): Show |
VPS72 | ENSG00000163159.15 | transcript | ENST00000368892.9 | protein_coding | 3492 | chr1 | TogoVar | |||||||
VPS8_chr3_184807166_185057604 | 184860468 | TACACAC | T | intron_variant | MODIFIER | HG00438.hp2 HG00673.hp1 HG01175.hp1 others(26): Show |
a0002a0003a0004others(1): Show | a0002c0002a0003c0016a0004c0003others(3): Show | a0002c0002t0001a0003c0016t0001a0004c0003t0001others(4): Show | a0002c0002t0001g0210 a0002c0002t0001g0234 a0002c0002t0001g0270 others(26): Show |
29 | 75 | 0.3867 | -6 | c.122 others(23): Show |
VPS8 | ENSG00000156931.16 | transcript | ENST00000625842.3 | protein_coding | 15/47 | INFO_REALIGN_3_PRIME | chr3 | TogoVar | ||||||
VPS8_chr3_184807166_185057604 | 184894527 | TATATAC | T | intron_variant | MODIFIER | HG02622.hp2 HG02630.hp2 HG03486.hp1 |
a0004 | a0004c0006 | a0004c0006t0003 | a0004c0006t0003g0050 a0004c0006t0003g0051 a0004c0006t0003g0053 |
3 | 272 | 0.0110 | -6 | c.178 others(23): Show |
VPS8 | ENSG00000156931.16 | transcript | ENST00000625842.3 | protein_coding | 22/47 | INFO_REALIGN_3_PRIME | chr3 | TogoVar | ||||||
VPS8_chr3_184807166_185057604 | 184962724 | AGTGTGT | A | intron_variant | MODIFIER | HG00438.hp2 HG00673.hp1 HG01074.hp2 others(16): Show |
a0001a0002a0003others(1): Show | a0001c0022a0001c0029a0002c0002others(3): Show | a0001c0022t0004a0001c0029t0002a0002c0002t0001others(4): Show | a0001c0022t0004g0191 a0001c0029t0002g0166 a0002c0002t0001g0189 others(16): Show |
19 | 31 | 0.6129 | -6 | c.318 others(25): Show |
VPS8 | ENSG00000156931.16 | transcript | ENST00000625842.3 | protein_coding | 37/47 | INFO_REALIGN_3_PRIME | chr3 | TogoVar | ||||||
VPS8_chr3_184807166_185057604 | 185034609 | TTTGTTG | T | intron_variant | MODIFIER | HG00438.hp1 HG01884.hp2 HG02145.hp2 others(14): Show |
a0001a0003a0004others(2): Show | a0001c0025a0001c0029a0003c0005others(4): Show | a0001c0025t0003a0001c0029t0002a0003c0005t0001others(4): Show | a0001c0025t0003g0022 a0001c0029t0002g0166 a0003c0005t0001g0023 others(14): Show |
17 | 132 | 0.1288 | -6 | c.405 others(27): Show |
VPS8 | ENSG00000156931.16 | transcript | ENST00000625842.3 | protein_coding | 46/47 | INFO_REALIGN_3_PRIME | chr3 | TogoVar | ||||||
VRK1_chr14_96792382_96886609 | 96795303 | TGTGTGG | T | upstream_gene_variant | MODIFIER | HG00733.hp1 HG01884.hp1 HG02257.hp2 others(3): Show |
a0001 | a0001c0002 | a0001c0002t0001 | a0001c0002t0001g0040 a0001c0002t0001g0104 a0001c0002t0001g0105 others(3): Show |
6 | 276 | 0.0217 | -6 | c.-21 others(17): Show |
VRK1 | ENSG00000100749.9 | transcript | ENST00000216639.8 | protein_coding | 2078 | chr14 | TogoVar | |||||||
VRK1_chr14_96792382_96886609 | 96808017 | CTGTGTG | C | intron_variant | MODIFIER | HG01099.hp1 HG03491.hp2 NA18940.hp1 others(1): Show |
a0001 | a0001c0001 | a0001c0001t0001 | a0001c0001t0001g0141 a0001c0001t0001g0204 a0001c0001t0001g0205 others(1): Show |
4 | 98 | 0.0408 | -6 | c.-6+ others(23): Show |
VRK1 | ENSG00000100749.9 | transcript | ENST00000216639.8 | protein_coding | 1/12 | INFO_REALIGN_3_PRIME | chr14 | TogoVar | ||||||
VRK1_chr14_96792382_96886609 | 96867456 | AGTGTGT | A | intron_variant | MODIFIER | HG00642.hp2 HG01069.hp1 HG01071.hp2 others(29): Show |
a0001 | a0001c0002a0001c0003 | a0001c0002t0001a0001c0003t0001 | a0001c0002t0001g0018 a0001c0002t0001g0020 a0001c0002t0001g0021 others(24): Show |
32 | 64 | 0.5000 | -6 | c.106 others(25): Show |
VRK1 | ENSG00000100749.9 | transcript | ENST00000216639.8 | protein_coding | 11/12 | INFO_REALIGN_3_PRIME | chr14 | TogoVar | ||||||
VRK2_chr2_58041806_58164871 | 58073648 | ATATATT | A | intron_variant | MODIFIER | HG00099.hp1 HG00099.hp2 HG00280.hp1 others(229): Show |
a0001a0002a0007others(1): Show | a0001c0001a0001c0003a0001c0004others(3): Show | a0001c0001t0001a0001c0001t0002a0001c0003t0001others(7): Show | a0001c0001t0001g0001 a0001c0001t0001g0002 a0001c0001t0001g0004 others(223): Show |
232 | 326 | 0.7117 | -6 | c.137 others(25): Show |
VRK2 | ENSG00000028116.18 | transcript | ENST00000340157.9 | protein_coding | 2/12 | INFO_REALIGN_3_PRIME | chr2 | TogoVar | ||||||
VRK2_chr2_58041806_58164871 | 58081857 | CGTGTGT | C | intron_variant | MODIFIER | HG00099.hp1 HG01069.hp2 HG01071.hp1 others(25): Show |
a0001 | a0001c0001a0001c0004 | a0001c0001t0001a0001c0004t0001 | a0001c0001t0001g0001 a0001c0001t0001g0004 a0001c0001t0001g0019 others(22): Show |
28 | 72 | 0.3889 | -6 | c.137 others(23): Show |
VRK2 | ENSG00000028116.18 | transcript | ENST00000340157.9 | protein_coding | 2/12 | INFO_REALIGN_3_PRIME | chr2 | TogoVar | ||||||
VRK2_chr2_58041806_58164871 | 58104458 | TACAGTA | T | intron_variant | MODIFIER | HG01891.hp2 HG02109.hp1 HG02257.hp1 others(15): Show |
a0001 | a0001c0001 | a0001c0001t0001 | a0001c0001t0001g0259 a0001c0001t0001g0309 a0001c0001t0001g0310 others(15): Show |
18 | 338 | 0.0533 | -6 | c.543 others(25): Show |
VRK2 | ENSG00000028116.18 | transcript | ENST00000340157.9 | protein_coding | 7/12 | INFO_REALIGN_3_PRIME | chr2 | TogoVar | ||||||
VRK2_chr2_58041806_58164871 | 58151731 | GTTTTTT | G | intron_variant | MODIFIER | HG00738.hp1 HG01243.hp2 HG02647.hp1 others(7): Show |
a0001 | a0001c0001a0001c0003 | a0001c0001t0001a0001c0003t0001a0001c0003t0004 | a0001c0001t0001g0175 a0001c0001t0001g0262 a0001c0001t0001g0264 others(7): Show |
10 | 35 | 0.2857 | -6 | c.118 others(25): Show |
VRK2 | ENSG00000028116.18 | transcript | ENST00000340157.9 | protein_coding | 12/12 | INFO_REALIGN_3_PRIME | chr2 | TogoVar | ||||||
VSIG10L2_chr11_125941044_125961319 | 125958563 | ATATGTG | A | downstream_gene_variant | MODIFIER | HG00408.hp2 HG00621.hp1 HG00673.hp2 others(20): Show |
a0001a0006a0007others(1): Show | a0001c0002a0006c0006a0007c0013others(1): Show | a0001c0002t0001a0006c0006t0001a0007c0013t0001others(1): Show | a0001c0002t0001g0029 a0006c0006t0001g0005 a0006c0006t0001g0064 others(2): Show |
23 | 352 | 0.0653 | -6 | c.*26 others(17): Show |
VSIG10L2 | ENSG00000283703.3 | transcript | ENST00000686984.1 | protein_coding | 2245 | chr11 | TogoVar |