Joint Open Genome and Omics Platform (JoGo)

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ALDH2_chr12_111761933_111822532 / BRCA1_chr17_43039295_43130364 etc.

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Snpeff annotation impact

Snpeff annotation impact detail

Hapid

Enter haplotype IDs (e.g., a1c1t1g1, a1c1, a1) separated by commas <= a0001 (zero padding also accept)

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regionname	pos	ref	alt	annotation	impact	samples	ahapids	achapids	acthapids	actghapids	ac	an	af	len	hgvs_c	genename	geneid	featuretype	featureid	transcript_biotype	rank	distance	status	chr	external
NPRL3_chr16_80386_143673	103296	ATTTTTTT others(1): Show ATTTTTTTT	A A	intron_variant intron_variant	MODIFIER	HG01070.hp1 HG01071.hp1 HG01261.hp2 others(15): Show HG01070.hp1 HG01071.hp1 HG01261.hp2 HG01433.hp2 HG01975.hp1 HG02273.hp1 HG02622.hp2 HG02630.hp1 HG02976.hp2 HG03540.hp2 HG03654.hp1 NA18945.hp1 NA18973.hp1 NA18995.hp2 NA19009.hp1 NA19068.hp1 NA19074.hp1 NA19088.hp2	a0001 a0007 a0001 a0007	a0001c0001 a0007c0012 a0001c0001 a0007c0012	a0001c0001t0001 a0001c0001t0020 a0007c0012t0002 a0001c0001t0001 a0001c0001t0020 a0007c0012t0002	a0001c0001t0001g0010 a0001c0001t0001g0018 a0001c0001t0001g0019 others(15): Show a0001c0001t0001g0010 a0001c0001t0001g0018 a0001c0001t0001g0019 a0001c0001t0001g0020 a0001c0001t0001g0021 a0001c0001t0001g0025 a0001c0001t0001g0026 a0001c0001t0001g0027 a0001c0001t0001g0028 a0001c0001t0001g0029 a0001c0001t0001g0043 a0001c0001t0001g0089 a0001c0001t0001g0090 a0001c0001t0001g0101 a0001c0001t0001g0102 a0001c0001t0001g0104 a0001c0001t0020g0105 a0007c0012t0002g0148	18	350	0.0514	-8	c.630 others(25): Show c.630-2795_630-2788delAAAAAAAA	NPRL3	ENSG00000103148.17	transcript	ENST00000611875.5	protein_coding	7/13			chr16	TogoVar
NPRL3_chr16_80386_143673	132664	ATTTCTTT others(1): Show ATTTCTTTT	A A	intron_variant intron_variant	MODIFIER	HG02148.hp1 HG02451.hp1 HG02451.hp2 others(14): Show HG02148.hp1 HG02451.hp1 HG02451.hp2 HG02572.hp1 HG02717.hp2 HG02809.hp2 HG02895.hp1 HG02896.hp1 HG02897.hp1 HG03041.hp1 HG03041.hp2 HG03098.hp2 HG03486.hp1 HG03516.hp1 HG03579.hp1 NA19043.hp1 NA20129.hp1	a0001 a0003 a0009 a0001 a0003 a0009	a0001c0001 a0003c0004 a0009c0009 a0001c0001 a0003c0004 a0009c0009	a0001c0001t0001 a0001c0001t0002 a0001c0001t0003 others(5): Show a0001c0001t0001 a0001c0001t0002 a0001c0001t0003 a0001c0001t0007 a0001c0001t0014 a0001c0001t0016 a0003c0004t0002 a0009c0009t0002	a0001c0001t0001g0289 a0001c0001t0002g0131 a0001c0001t0002g0137 others(14): Show a0001c0001t0001g0289 a0001c0001t0002g0131 a0001c0001t0002g0137 a0001c0001t0002g0140 a0001c0001t0002g0147 a0001c0001t0002g0328 a0001c0001t0003g0136 a0001c0001t0003g0138 a0001c0001t0007g0139 a0001c0001t0007g0144 a0001c0001t0007g0145 a0001c0001t0007g0146 a0001c0001t0014g0135 a0001c0001t0016g0142 a0003c0004t0002g0141 a0003c0004t0002g0143 a0009c0009t0002g0133	17	350	0.0486	-8	c.119 others(25): Show c.119-2081_119-2074delAAAAGAAA	NPRL3	ENSG00000103148.17	transcript	ENST00000611875.5	protein_coding	2/13			chr16	TogoVar
NPRL3_chr16_80386_143673	134694	ATTTTTTT others(1): Show ATTTTTTTT	A A	intron_variant intron_variant	MODIFIER	HG00642.hp2 HG01975.hp2 HG01978.hp2 others(17): Show HG00642.hp2 HG01975.hp2 HG01978.hp2 HG02109.hp2 HG02129.hp1 HG04204.hp2 NA18947.hp1 NA18948.hp1 NA18962.hp2 NA18971.hp2 NA18974.hp1 NA18978.hp2 NA18979.hp1 NA18984.hp1 NA18999.hp1 NA19004.hp2 NA19005.hp2 NA19012.hp2 NA19077.hp2 NA19088.hp1	a0001 a0003 a0001 a0003	a0001c0001 a0001c0002 a0003c0015 a0001c0001 a0001c0002 a0003c0015	a0001c0001t0002 a0001c0001t0004 a0001c0002t0004 others(1): Show a0001c0001t0002 a0001c0001t0004 a0001c0002t0004 a0003c0015t0004	a0001c0001t0002g0149 a0001c0001t0004g0302 a0001c0002t0004g0297 others(17): Show a0001c0001t0002g0149 a0001c0001t0004g0302 a0001c0002t0004g0297 a0001c0002t0004g0298 a0001c0002t0004g0299 a0001c0002t0004g0300 a0001c0002t0004g0301 a0001c0002t0004g0304 a0001c0002t0004g0305 a0001c0002t0004g0306 a0001c0002t0004g0307 a0001c0002t0004g0308 a0001c0002t0004g0309 a0001c0002t0004g0310 a0001c0002t0004g0311 a0001c0002t0004g0312 a0001c0002t0004g0313 a0001c0002t0004g0314 a0001c0002t0004g0342 a0003c0015t0004g0303	20	350	0.0571	-8	c.118 others(25): Show c.118+3448_118+3455delAAAAAAAA	NPRL3	ENSG00000103148.17	transcript	ENST00000611875.5	protein_coding	2/13			chr16	TogoVar
NPRL3_chr16_80386_143673	139200	AAAAGAAA others(1): Show AAAAGAAAG	A A	upstream_gene_variant upstream_gene_variant	MODIFIER	HG01069.hp2 HG01071.hp2 HG03098.hp1 others(3): Show HG01069.hp2 HG01071.hp2 HG03098.hp1 HG03130.hp2 HG03486.hp2 NA20129.hp2	a0001 a0001	a0001c0001 a0001c0014 a0001c0001 a0001c0014	a0001c0001t0001 a0001c0001t0018 a0001c0014t0021 a0001c0001t0001 a0001c0001t0018 a0001c0014t0021	a0001c0001t0001g0274 a0001c0001t0001g0276 a0001c0001t0001g0278 others(3): Show a0001c0001t0001g0274 a0001c0001t0001g0276 a0001c0001t0001g0278 a0001c0001t0001g0279 a0001c0001t0018g0275 a0001c0014t0021g0277	6	350	0.0171	-8	c.-63 others(17): Show c.-634_-627delCTTTCTTT	NPRL3	ENSG00000103148.17	transcript	ENST00000611875.5	protein_coding		528		chr16	TogoVar
NPSR1_chr7_34653218_34854978	34689604	CAAAAAAA others(1): Show CAAAAAAAA	C C	intron_variant intron_variant	MODIFIER	HG00140.hp2 HG00544.hp1 HG00639.hp1 others(35): Show HG00140.hp2 HG00544.hp1 HG00639.hp1 HG00741.hp2 HG01071.hp1 HG01074.hp2 HG01243.hp1 HG01255.hp2 HG01261.hp1 HG01516.hp2 HG02027.hp1 HG02486.hp2 HG02615.hp2 HG02683.hp2 HG02723.hp1 HG02965.hp1 HG03041.hp1 HG03130.hp2 HG03139.hp2 HG03225.hp1 HG03453.hp2 HG03486.hp1 HG03490.hp2 HG03669.hp2 HG04184.hp2 NA18952.hp2 NA18959.hp2 NA18962.hp2 NA18963.hp2 NA18966.hp1 NA18999.hp2 NA19007.hp1 NA19007.hp2 NA19030.hp2 NA19043.hp1 NA19054.hp1 NA20300.hp1 NA20805.hp2	a0001 a0002 a0003 others(4): Show a0001 a0002 a0003 a0004 a0005 a0006 a0007	a0001c0002 a0001c0008 a0002c0001 others(7): Show a0001c0002 a0001c0008 a0002c0001 a0003c0005 a0004c0003 a0005c0004 a0005c0021 a0006c0006 a0007c0014 a0007c0023	a0001c0002t0001 a0001c0002t0002 a0001c0002t0003 others(16): Show a0001c0002t0001 a0001c0002t0002 a0001c0002t0003 a0001c0002t0007 a0001c0008t0003 a0001c0008t0007 a0002c0001t0001 a0002c0001t0002 a0002c0001t0003 a0002c0001t0007 a0003c0005t0002 a0003c0005t0011 a0004c0003t0002 a0004c0003t0004 a0005c0004t0003 a0005c0021t0003 a0006c0006t0001 a0007c0014t0002 a0007c0023t0003	a0001c0002t0001g0231 a0001c0002t0001g0234 a0001c0002t0002g0222 others(34): Show a0001c0002t0001g0231 a0001c0002t0001g0234 a0001c0002t0002g0222 a0001c0002t0002g0248 a0001c0002t0003g0225 a0001c0002t0003g0226 a0001c0002t0003g0228 a0001c0002t0003g0230 a0001c0002t0003g0238 a0001c0002t0007g0236 a0001c0002t0007g0239 a0001c0008t0003g0187 a0001c0008t0003g0233 a0001c0008t0007g0232 a0002c0001t0001g0004 a0002c0001t0002g0181 a0002c0001t0003g0240 a0002c0001t0007g0235 a0003c0005t0002g0171 a0003c0005t0002g0182 a0003c0005t0002g0229 a0003c0005t0011g0237 a0004c0003t0002g0179 a0004c0003t0002g0227 a0004c0003t0004g0104 a0005c0004t0003g0180 a0005c0004t0003g0183 a0005c0004t0003g0184 a0005c0004t0003g0186 a0005c0021t0003g0209 a0006c0006t0001g0047 a0006c0006t0001g0067 a0007c0014t0002g0242 a0007c0014t0002g0244 a0007c0014t0002g0246 a0007c0014t0002g0247 a0007c0023t0003g0256	38	260	0.1462	-8	c.280 others(25): Show c.280+4943_280+4950delAAAAAAAA	NPSR1	ENSG00000187258.14	transcript	ENST00000360581.6	protein_coding	2/8		INFO_REALIGN_3_PRIME	chr7	TogoVar
NPSR1_chr7_34653218_34854978	34723516	CATAAATA others(1): Show CATAAATAA	C C	intron_variant intron_variant	MODIFIER	HG01496.hp1 HG01496.hp2 HG02148.hp2 others(3): Show HG01496.hp1 HG01496.hp2 HG02148.hp2 HG03491.hp1 HG03491.hp2 HG03492.hp2	a0002 a0003 a0002 a0003	a0002c0001 a0003c0007 a0002c0001 a0003c0007	a0002c0001t0001 a0003c0007t0002 a0002c0001t0001 a0003c0007t0002	a0002c0001t0001g0076 a0002c0001t0001g0081 a0002c0001t0001g0086 others(3): Show a0002c0001t0001g0076 a0002c0001t0001g0081 a0002c0001t0001g0086 a0002c0001t0001g0105 a0003c0007t0002g0148 a0003c0007t0002g0149	6	260	0.0231	-8	c.280 others(27): Show c.280+38866_280+38873delTAAATAAA	NPSR1	ENSG00000187258.14	transcript	ENST00000360581.6	protein_coding	2/8		INFO_REALIGN_3_PRIME	chr7	TogoVar
NPSR1_chr7_34653218_34854978	34792567	ATATATGT others(1): Show ATATATGTG	A A	intron_variant intron_variant	MODIFIER	HG00140.hp1 HG00639.hp1 HG00673.hp1 others(25): Show HG00140.hp1 HG00639.hp1 HG00673.hp1 HG00733.hp1 HG00741.hp2 HG01070.hp1 HG01071.hp1 HG01074.hp2 HG01109.hp2 HG01243.hp1 HG01261.hp1 HG01516.hp2 HG01934.hp2 HG02027.hp1 HG02280.hp1 HG02615.hp2 HG02683.hp2 HG03490.hp2 HG03654.hp2 HG03669.hp2 HG04184.hp2 HG04228.hp2 NA18959.hp2 NA18960.hp2 NA18962.hp2 NA18966.hp1 NA18989.hp1 NA20752.hp1	a0001 a0003 a0001 a0003	a0001c0002 a0001c0008 a0003c0005 a0001c0002 a0001c0008 a0003c0005	a0001c0002t0001 a0001c0002t0002 a0001c0002t0003 others(5): Show a0001c0002t0001 a0001c0002t0002 a0001c0002t0003 a0001c0002t0007 a0001c0008t0003 a0001c0008t0007 a0003c0005t0002 a0003c0005t0011	a0001c0002t0001g0039 a0001c0002t0001g0093 a0001c0002t0001g0231 others(25): Show a0001c0002t0001g0039 a0001c0002t0001g0093 a0001c0002t0001g0231 a0001c0002t0001g0234 a0001c0002t0002g0211 a0001c0002t0002g0248 a0001c0002t0003g0210 a0001c0002t0003g0216 a0001c0002t0003g0221 a0001c0002t0003g0225 a0001c0002t0003g0226 a0001c0002t0003g0228 a0001c0002t0003g0230 a0001c0002t0003g0238 a0001c0002t0007g0214 a0001c0002t0007g0215 a0001c0002t0007g0236 a0001c0002t0007g0239 a0001c0008t0003g0233 a0001c0008t0007g0232 a0003c0005t0002g0171 a0003c0005t0002g0182 a0003c0005t0002g0195 a0003c0005t0002g0213 a0003c0005t0002g0220 a0003c0005t0002g0224 a0003c0005t0002g0229 a0003c0005t0011g0237	28	260	0.1077	-8	c.384 others(27): Show c.384+14004_384+14011delATATGTGT	NPSR1	ENSG00000187258.14	transcript	ENST00000360581.6	protein_coding	3/8		INFO_REALIGN_3_PRIME	chr7	TogoVar
NPSR1_chr7_34653218_34854978	34801665	GGGATGCC others(1): Show GGGATGCCC	G G	intron_variant intron_variant	MODIFIER	HG01891.hp1 HG02486.hp1 HG02717.hp1 others(6): Show HG01891.hp1 HG02486.hp1 HG02717.hp1 HG02723.hp2 HG02970.hp1 HG02976.hp1 HG03209.hp1 HG03471.hp1 NA20129.hp2	a0001 a0003 a0018 a0001 a0003 a0018	a0001c0002 a0003c0005 a0018c0026 a0001c0002 a0003c0005 a0018c0026	a0001c0002t0001 a0001c0002t0002 a0001c0002t0003 others(3): Show a0001c0002t0001 a0001c0002t0002 a0001c0002t0003 a0001c0002t0004 a0003c0005t0002 a0018c0026t0004	a0001c0002t0001g0015 a0001c0002t0001g0016 a0001c0002t0002g0120 others(6): Show a0001c0002t0001g0015 a0001c0002t0001g0016 a0001c0002t0002g0120 a0001c0002t0002g0175 a0001c0002t0003g0177 a0001c0002t0004g0006 a0001c0002t0004g0007 a0003c0005t0002g0126 a0018c0026t0004g0008	9	260	0.0346	-8	c.385 others(27): Show c.385-10104_385-10097delGGATGCCC	NPSR1	ENSG00000187258.14	transcript	ENST00000360581.6	protein_coding	3/8			chr7	TogoVar
NPSR1_chr7_34653218_34854978	34840477	GAGGAGAG others(1): Show GAGGAGAGA	G G	intron_variant intron_variant	MODIFIER	HG00140.hp2 HG00639.hp1 HG01169.hp1 others(43): Show HG00140.hp2 HG00639.hp1 HG01169.hp1 HG01243.hp2 HG01256.hp2 HG01257.hp1 HG01258.hp2 HG01261.hp2 HG01884.hp2 HG01891.hp2 HG01934.hp1 HG01934.hp2 HG01978.hp1 HG02015.hp2 HG02027.hp2 HG02280.hp1 HG02523.hp1 HG02559.hp1 HG02922.hp2 HG03471.hp2 HG03486.hp2 HG03491.hp2 HG03492.hp2 HG03540.hp1 HG03669.hp2 HG03831.hp1 NA18906.hp2 NA18954.hp2 NA18957.hp1 NA18959.hp1 NA18959.hp2 NA18966.hp2 NA18971.hp1 NA18982.hp1 NA18986.hp1 NA18989.hp1 NA18999.hp1 NA19000.hp1 NA19007.hp2 NA19054.hp2 NA19062.hp1 NA19079.hp2 NA19081.hp1 NA19087.hp2 NA19091.hp2 NA20129.hp1	a0003 a0004 a0009 others(2): Show a0003 a0004 a0009 a0010 a0011	a0003c0005 a0003c0007 a0003c0010 others(5): Show a0003c0005 a0003c0007 a0003c0010 a0004c0003 a0009c0013 a0010c0024 a0010c0028 a0011c0017	a0003c0005t0002 a0003c0005t0004 a0003c0005t0011 others(13): Show a0003c0005t0002 a0003c0005t0004 a0003c0005t0011 a0003c0007t0002 a0003c0007t0004 a0003c0007t0005 a0003c0010t0002 a0003c0010t0004 a0004c0003t0002 a0004c0003t0004 a0004c0003t0005 a0009c0013t0002 a0009c0013t0004 a0010c0024t0004 a0010c0028t0002 a0011c0017t0004	a0003c0005t0002g0171 a0003c0005t0002g0189 a0003c0005t0002g0195 others(43): Show a0003c0005t0002g0171 a0003c0005t0002g0189 a0003c0005t0002g0195 a0003c0005t0002g0220 a0003c0005t0002g0224 a0003c0005t0002g0229 a0003c0005t0004g0217 a0003c0005t0011g0237 a0003c0007t0002g0138 a0003c0007t0002g0148 a0003c0007t0002g0149 a0003c0007t0002g0156 a0003c0007t0004g0091 a0003c0007t0005g0142 a0003c0010t0002g0161 a0003c0010t0004g0048 a0003c0010t0004g0049 a0003c0010t0004g0051 a0003c0010t0004g0054 a0003c0010t0004g0060 a0003c0010t0004g0065 a0003c0010t0004g0077 a0004c0003t0002g0030 a0004c0003t0002g0132 a0004c0003t0002g0178 a0004c0003t0002g0198 a0004c0003t0002g0204 a0004c0003t0002g0205 a0004c0003t0002g0227 a0004c0003t0002g0243 a0004c0003t0002g0249 a0004c0003t0004g0018 a0004c0003t0004g0024 a0004c0003t0004g0026 a0004c0003t0004g0034 a0004c0003t0004g0037 a0004c0003t0004g0104 a0004c0003t0004g0172 a0004c0003t0004g0173 a0004c0003t0005g0097 a0009c0013t0002g0241 a0009c0013t0004g0102 a0010c0024t0004g0165 a0010c0028t0002g0143 a0011c0017t0004g0075 a0011c0017t0004g0106	46	260	0.1769	-8	c.758 others(25): Show c.758-4418_758-4411delAGGAGAGA	NPSR1	ENSG00000187258.14	transcript	ENST00000360581.6	protein_coding	6/8			chr7	TogoVar
NPSR1_chr7_34653218_34854978	34845673	ATTGATTT others(1): Show ATTGATTTT	A A	intron_variant intron_variant	MODIFIER	NA18952.hp2 NA18963.hp2 NA19057.hp2 NA18952.hp2 NA18963.hp2 NA19057.hp2	a0002 a0002	a0002c0001 a0002c0001	a0002c0001t0001 a0002c0001t0001	a0002c0001t0001g0004 a0002c0001t0001g0107 a0002c0001t0001g0004 a0002c0001t0001g0107	3	260	0.0115	-8	c.844 others(23): Show c.844+692_844+699delTTGATTTT	NPSR1	ENSG00000187258.14	transcript	ENST00000360581.6	protein_coding	7/8			chr7	TogoVar
NPTN_chr15_73555014_73638389	73580430	ATAATATA others(1): Show ATAATATAT	A A	intron_variant intron_variant	MODIFIER	HG00733.hp2 HG00735.hp2 HG02572.hp1 others(2): Show HG00733.hp2 HG00735.hp2 HG02572.hp1 HG03688.hp1 HG04228.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0012 a0001c0001t0001g0014 a0001c0001t0001g0133 a0001c0001t0001g0012 a0001c0001t0001g0014 a0001c0001t0001g0133	5	342	0.0146	-8	c.707 others(25): Show c.707-6643_707-6636delATATATTA	NPTN	ENSG00000156642.17	transcript	ENST00000345330.9	protein_coding	4/8			chr15	TogoVar
NPTN_chr15_73555014_73638389	73580588	TTATATAT others(1): Show TTATATATG	T T	intron_variant intron_variant	MODIFIER	HG01496.hp2 HG02055.hp2 HG02615.hp1 others(10): Show HG01496.hp2 HG02055.hp2 HG02615.hp1 HG02622.hp1 HG02630.hp1 HG02809.hp1 HG02809.hp2 HG03098.hp1 HG03130.hp1 HG03209.hp2 HG03516.hp1 HG06807.hp2 NA18906.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0004 a0001c0001t0001g0232 a0001c0001t0001g0233 others(7): Show a0001c0001t0001g0004 a0001c0001t0001g0232 a0001c0001t0001g0233 a0001c0001t0001g0234 a0001c0001t0001g0235 a0001c0001t0001g0236 a0001c0001t0001g0237 a0001c0001t0001g0238 a0001c0001t0001g0239 a0001c0001t0001g0241	13	342	0.0380	-8	c.707 others(25): Show c.707-6801_707-6794delCATATATA	NPTN	ENSG00000156642.17	transcript	ENST00000345330.9	protein_coding	4/8			chr15	TogoVar
NPTX2_chr7_98612285_98634869	98613740	TACACACA others(1): Show TACACACAC	T T	upstream_gene_variant upstream_gene_variant	MODIFIER	HG02572.hp1 HG02647.hp2 HG02965.hp1 others(9): Show HG02572.hp1 HG02647.hp2 HG02965.hp1 HG03041.hp1 HG03579.hp1 HG03704.hp1 HG03834.hp1 HG06807.hp2 NA18906.hp2 NA19030.hp2 NA20905.hp2 NA21309.hp1	a0001 a0002 a0001 a0002	a0001c0001 a0001c0002 a0001c0005 others(1): Show a0001c0001 a0001c0002 a0001c0005 a0002c0003	a0001c0001t0001 a0001c0002t0001 a0001c0002t0004 others(3): Show a0001c0001t0001 a0001c0002t0001 a0001c0002t0004 a0001c0002t0021 a0001c0005t0028 a0002c0003t0004	a0001c0001t0001g0007 a0001c0002t0001g0029 a0001c0002t0004g0011 others(4): Show a0001c0001t0001g0007 a0001c0002t0001g0029 a0001c0002t0004g0011 a0001c0002t0004g0102 a0001c0002t0021g0062 a0001c0005t0028g0011 a0002c0003t0004g0011	12	412	0.0291	-8	c.-37 others(19): Show c.-3721_-3714delACACACAC	NPTX2	ENSG00000106236.4	transcript	ENST00000265634.4	protein_coding		3544		chr7	TogoVar
NPTXR_chr22_38813452_38849028	38813890	TTTTCTTT others(1): Show TTTTCTTTC	T T	downstream_gene_variant downstream_gene_variant	MODIFIER	HG02717.hp2 NA18977.hp1 NA19000.hp1 others(2): Show HG02717.hp2 NA18977.hp1 NA19000.hp1 NA19011.hp1 NA19086.hp1	a0001 a0001	a0001c0001 a0001c0003 a0001c0001 a0001c0003	a0001c0001t0008 a0001c0001t0009 a0001c0003t0044 a0001c0001t0008 a0001c0001t0009 a0001c0003t0044	a0001c0001t0008g0007 a0001c0001t0008g0207 a0001c0001t0009g0016 others(1): Show a0001c0001t0008g0007 a0001c0001t0008g0207 a0001c0001t0009g0016 a0001c0003t0044g0249	5	354	0.0141	-8	c.87 others(19): Show c.8711_*8718delGAAAGAAA	NPTXR	ENSG00000221890.6	transcript	ENST00000333039.4	protein_coding		4561		chr22	TogoVar
NPTXR_chr22_38813452_38849028	38838573	ATTTTTTT others(1): Show ATTTTTTTT	A A	intron_variant intron_variant	MODIFIER	HG01074.hp2 HG01993.hp1 HG02071.hp1 others(16): Show HG01074.hp2 HG01993.hp1 HG02071.hp1 HG02074.hp1 HG02135.hp2 HG02165.hp2 HG03098.hp1 HG03209.hp1 HG03516.hp2 HG03688.hp1 HG04115.hp2 NA18747.hp2 NA18959.hp2 NA18988.hp1 NA18990.hp1 NA19056.hp2 NA19066.hp1 NA19083.hp1 NA20905.hp1	a0001 a0001	a0001c0003 a0001c0003	a0001c0003t0002 a0001c0003t0004 a0001c0003t0034 others(1): Show a0001c0003t0002 a0001c0003t0004 a0001c0003t0034 a0001c0003t0042	a0001c0003t0002g0045 a0001c0003t0002g0047 a0001c0003t0002g0049 others(10): Show a0001c0003t0002g0045 a0001c0003t0002g0047 a0001c0003t0002g0049 a0001c0003t0002g0052 a0001c0003t0004g0005 a0001c0003t0004g0018 a0001c0003t0004g0044 a0001c0003t0004g0046 a0001c0003t0004g0048 a0001c0003t0004g0050 a0001c0003t0004g0051 a0001c0003t0034g0043 a0001c0003t0042g0042	19	354	0.0537	-8	c.624 others(25): Show c.624+4654_624+4661delAAAAAAAA	NPTXR	ENSG00000221890.6	transcript	ENST00000333039.4	protein_coding	1/4			chr22	TogoVar
NPVF_chr7_25219570_25233486	25229984	GTGTGTGT others(1): Show GTGTGTGTA	G G	upstream_gene_variant upstream_gene_variant	MODIFIER	HG02647.hp1 HG02723.hp2 HG03453.hp1 others(2): Show HG02647.hp1 HG02723.hp2 HG03453.hp1 HG03471.hp2 NA19060.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0004 a0001c0001t0004	a0001c0001t0004g0004 a0001c0001t0004g0014 a0001c0001t0004g0004 a0001c0001t0004g0014	5	450	0.0111	-8	c.-15 others(19): Show c.-1553_-1546delTACACACA	NPVF	ENSG00000105954.2	transcript	ENST00000222674.2	protein_coding		1499		chr7	TogoVar
NPY2R_chr4_155203636_155222076	155205804	GCTATCTA others(1): Show GCTATCTAT	G G	upstream_gene_variant upstream_gene_variant	MODIFIER	HG00438.hp1 HG02074.hp1 HG02258.hp1 others(6): Show HG00438.hp1 HG02074.hp1 HG02258.hp1 HG02280.hp1 HG02559.hp1 HG02886.hp2 HG04204.hp1 NA20905.hp1 NA21309.hp1	a0001 a0001	a0001c0001 a0001c0002 a0001c0001 a0001c0002	a0001c0001t0001 a0001c0001t0005 a0001c0002t0001 a0001c0001t0001 a0001c0001t0005 a0001c0002t0001	a0001c0001t0001g0001 a0001c0001t0001g0009 a0001c0001t0001g0012 others(5): Show a0001c0001t0001g0001 a0001c0001t0001g0009 a0001c0001t0001g0012 a0001c0001t0001g0017 a0001c0001t0001g0039 a0001c0001t0001g0064 a0001c0001t0005g0001 a0001c0002t0001g0034	9	468	0.0192	-8	c.-33 others(19): Show c.-3313_-3306delCTATCTAT	NPY2R	ENSG00000185149.6	transcript	ENST00000329476.4	protein_coding		2831		chr4	TogoVar
NPY4R2_chr10_47913662_47928524	47913930	CTTCTTTT others(1): Show CTTCTTTTT	C C	upstream_gene_variant upstream_gene_variant	MODIFIER	HG00140.hp2 HG00639.hp2 HG01261.hp1 others(11): Show HG00140.hp2 HG00639.hp2 HG01261.hp1 HG01361.hp2 HG01981.hp1 HG02523.hp2 HG02809.hp1 HG02809.hp2 HG02922.hp1 HG03017.hp2 HG03098.hp2 HG03239.hp2 HG04199.hp2 HG04228.hp1	a0001 a0002 a0001 a0002	a0001c0003 a0001c0005 a0002c0001 a0001c0003 a0001c0005 a0002c0001	a0001c0003t0001 a0001c0005t0001 a0002c0001t0001 a0001c0003t0001 a0001c0005t0001 a0002c0001t0001	a0001c0003t0001g0007 a0001c0003t0001g0019 a0001c0003t0001g0020 others(5): Show a0001c0003t0001g0007 a0001c0003t0001g0019 a0001c0003t0001g0020 a0001c0003t0001g0028 a0001c0003t0001g0029 a0001c0003t0001g0030 a0001c0005t0001g0005 a0002c0001t0001g0001	14	276	0.0507	-8	c.-52 others(19): Show c.-5227_-5220delTTCTTTTT	NPY4R2	ENSG00000264717.6	transcript	ENST00000576178.7	protein_coding		4731		chr10	TogoVar
NPY4R_chr10_46456099_46470958	46466282	TTCTCTCT others(1): Show TTCTCTCTC	T T	upstream_gene_variant upstream_gene_variant	MODIFIER	HG01257.hp2 HG02735.hp2 HG02896.hp2 others(3): Show HG01257.hp2 HG02735.hp2 HG02896.hp2 HG03209.hp2 NA18612.hp1 NA18986.hp2	a0002 a0002	a0002c0002 a0002c0002	a0002c0002t0001 a0002c0002t0003 a0002c0002t0006 a0002c0002t0001 a0002c0002t0003 a0002c0002t0006	a0002c0002t0001g0002 a0002c0002t0001g0043 a0002c0002t0003g0007 others(1): Show a0002c0002t0001g0002 a0002c0002t0001g0043 a0002c0002t0003g0007 a0002c0002t0006g0012	6	290	0.0207	-8	c.-82 others(17): Show c.-828_-821delGAGAGAGA	NPY4R	ENSG00000204174.8	transcript	ENST00000374312.5	protein_coding		325		chr10	TogoVar
NPY5R_chr4_163338892_163356934	163342981	GACACACA others(1): Show GACACACAC	G G	upstream_gene_variant upstream_gene_variant	MODIFIER	HG00099.hp1 HG00280.hp2 HG00323.hp1 others(149): Show HG00099.hp1 HG00280.hp2 HG00323.hp1 HG00323.hp2 HG00438.hp1 HG00544.hp1 HG00544.hp2 HG00597.hp2 HG00621.hp2 HG00639.hp1 HG00642.hp2 HG00673.hp2 HG00735.hp1 HG00738.hp2 HG00741.hp2 HG01069.hp2 HG01071.hp1 HG01074.hp2 HG01081.hp1 HG01081.hp2 HG01106.hp2 HG01123.hp2 HG01168.hp1 HG01168.hp2 HG01169.hp1 HG01192.hp1 HG01192.hp2 HG01243.hp1 HG01255.hp1 HG01258.hp1 HG01261.hp1 HG01346.hp2 HG01515.hp2 HG01891.hp1 HG01928.hp1 HG01943.hp2 HG01952.hp1 HG01975.hp1 HG01981.hp2 HG01993.hp1 HG01993.hp2 HG02015.hp2 HG02040.hp1 HG02055.hp2 HG02071.hp1 HG02129.hp1 HG02132.hp2 HG02135.hp2 HG02155.hp2 HG02257.hp1 HG02273.hp1 HG02293.hp2 HG02300.hp1 HG02451.hp1 HG02486.hp1 HG02622.hp1 HG02630.hp1 HG02717.hp2 HG02735.hp1 HG02809.hp1 HG02886.hp1 HG02970.hp2 HG03098.hp1 HG03098.hp2 HG03209.hp2 HG03239.hp2 HG03492.hp2 HG03516.hp1 HG03688.hp1 HG03710.hp2 HG03942.hp2 HG04115.hp1 HG04184.hp1 HG04228.hp2 NA18612.hp1 NA18612.hp2 NA18747.hp2 NA18939.hp2 NA18940.hp1 NA18940.hp2 NA18941.hp1 NA18943.hp1 NA18947.hp1 NA18948.hp1 NA18951.hp1 NA18951.hp2 NA18952.hp1 NA18952.hp2 NA18954.hp1 NA18954.hp2 NA18956.hp1 NA18959.hp1 NA18961.hp1 NA18962.hp2 NA18964.hp1 NA18964.hp2 NA18967.hp1 NA18967.hp2 NA18969.hp2 NA18975.hp2 NA18977.hp2 NA18978.hp1 NA18978.hp2 NA18981.hp1 NA18982.hp1 NA18982.hp2 NA18983.hp2 NA18985.hp2 NA18986.hp1 NA18993.hp1 NA18993.hp2 NA18994.hp1 NA18998.hp2 NA18999.hp1 NA18999.hp2 NA19000.hp1 NA19001.hp1 NA19002.hp1 NA19002.hp2 NA19004.hp1 NA19004.hp2 NA19006.hp1 NA19007.hp2 NA19009.hp1 NA19010.hp2 NA19011.hp1 NA19012.hp2 NA19054.hp1 NA19055.hp1 NA19058.hp2 NA19060.hp2 NA19062.hp2 NA19063.hp2 NA19065.hp1 NA19065.hp2 NA19066.hp1 NA19066.hp2 NA19067.hp2 NA19072.hp1 NA19074.hp1 NA19075.hp2 NA19079.hp2 NA19082.hp2 NA19083.hp1 NA19083.hp2 NA19087.hp1 NA19088.hp1 NA19090.hp2 NA19091.hp1 NA20752.hp1 NA20752.hp2 homoSapiens_chm13v2.hp1	a0001 a0001	a0001c0001 a0001c0002 a0001c0001 a0001c0002	a0001c0001t0001 a0001c0001t0002 a0001c0001t0004 others(1): Show a0001c0001t0001 a0001c0001t0002 a0001c0001t0004 a0001c0002t0001	a0001c0001t0001g0001 a0001c0001t0001g0002 a0001c0001t0001g0003 others(49): Show a0001c0001t0001g0001 a0001c0001t0001g0002 a0001c0001t0001g0003 a0001c0001t0001g0004 a0001c0001t0001g0008 a0001c0001t0001g0009 a0001c0001t0001g0011 a0001c0001t0001g0014 a0001c0001t0001g0015 a0001c0001t0001g0019 a0001c0001t0001g0020 a0001c0001t0001g0023 a0001c0001t0001g0025 a0001c0001t0001g0029 a0001c0001t0001g0039 a0001c0001t0001g0040 a0001c0001t0001g0041 a0001c0001t0001g0044 a0001c0001t0001g0048 a0001c0001t0001g0049 a0001c0001t0001g0050 a0001c0001t0001g0054 a0001c0001t0001g0058 a0001c0001t0001g0059 a0001c0001t0001g0062 a0001c0001t0001g0069 a0001c0001t0001g0076 a0001c0001t0001g0082 a0001c0001t0001g0083 a0001c0001t0001g0089 a0001c0001t0001g0091 a0001c0001t0001g0098 a0001c0001t0001g0099 a0001c0001t0001g0101 a0001c0001t0001g0103 a0001c0001t0001g0104 a0001c0001t0001g0116 a0001c0001t0002g0005 a0001c0001t0002g0006 a0001c0001t0002g0007 a0001c0001t0002g0017 a0001c0001t0002g0032 a0001c0001t0002g0035 a0001c0001t0002g0070 a0001c0001t0002g0084 a0001c0001t0002g0088 a0001c0001t0002g0106 a0001c0001t0002g0107 a0001c0001t0004g0011 a0001c0001t0004g0100 a0001c0002t0001g0010 a0001c0002t0001g0016	152	440	0.3455	-8	c.-11 others(19): Show c.-1139_-1132delACACACAC	NPY5R	ENSG00000164129.12	transcript	ENST00000338566.8	protein_coding		910		chr4	TogoVar
NQO2_chr6_2994894_3024755	2996829	CCCTTCCT others(1): Show CCCTTCCTT	C C	upstream_gene_variant upstream_gene_variant	MODIFIER	HG00280.hp1 HG00438.hp1 HG00642.hp2 others(51): Show HG00280.hp1 HG00438.hp1 HG00642.hp2 HG01070.hp2 HG01106.hp2 HG01346.hp2 HG01361.hp2 HG01433.hp1 HG01515.hp2 HG01517.hp1 HG01934.hp1 HG01934.hp2 HG01943.hp1 HG01952.hp2 HG01978.hp2 HG02015.hp1 HG02040.hp2 HG02135.hp2 HG02148.hp2 HG02280.hp2 HG02293.hp1 HG03130.hp2 HG03239.hp1 HG03516.hp1 HG03669.hp1 HG03831.hp1 HG03927.hp2 HG03942.hp1 HG04199.hp1 NA18939.hp2 NA18943.hp2 NA18952.hp2 NA18968.hp1 NA18968.hp2 NA18970.hp1 NA18978.hp2 NA18983.hp1 NA18985.hp1 NA18991.hp2 NA19004.hp2 NA19009.hp1 NA19010.hp2 NA19058.hp2 NA19062.hp1 NA19064.hp1 NA19067.hp2 NA19068.hp1 NA19068.hp2 NA19072.hp2 NA19074.hp2 NA19084.hp2 NA20129.hp1 NA20300.hp1 NA20905.hp2	a0001 a0002 a0004 others(2): Show a0001 a0002 a0004 a0005 a0007	a0001c0001 a0001c0003 a0001c0008 others(4): Show a0001c0001 a0001c0003 a0001c0008 a0002c0002 a0004c0006 a0005c0007 a0007c0011	a0001c0001t0001 a0001c0001t0004 a0001c0003t0001 others(5): Show a0001c0001t0001 a0001c0001t0004 a0001c0003t0001 a0001c0008t0001 a0002c0002t0001 a0004c0006t0002 a0005c0007t0001 a0007c0011t0001	a0001c0001t0001g0005 a0001c0001t0001g0006 a0001c0001t0001g0008 others(37): Show a0001c0001t0001g0005 a0001c0001t0001g0006 a0001c0001t0001g0008 a0001c0001t0001g0010 a0001c0001t0001g0018 a0001c0001t0001g0019 a0001c0001t0001g0030 a0001c0001t0001g0032 a0001c0001t0001g0034 a0001c0001t0001g0036 a0001c0001t0001g0058 a0001c0001t0001g0059 a0001c0001t0001g0066 a0001c0001t0001g0071 a0001c0001t0001g0072 a0001c0001t0001g0077 a0001c0001t0001g0079 a0001c0001t0001g0082 a0001c0001t0001g0083 a0001c0001t0001g0088 a0001c0001t0001g0094 a0001c0001t0001g0096 a0001c0001t0001g0098 a0001c0001t0001g0099 a0001c0001t0001g0100 a0001c0001t0001g0106 a0001c0001t0001g0110 a0001c0001t0001g0111 a0001c0001t0001g0119 a0001c0001t0001g0138 a0001c0001t0004g0134 a0001c0003t0001g0069 a0001c0003t0001g0070 a0001c0008t0001g0103 a0002c0002t0001g0023 a0002c0002t0001g0097 a0004c0006t0002g0055 a0005c0007t0001g0005 a0005c0007t0001g0086 a0007c0011t0001g0006	54	446	0.1211	-8	c.-33 others(19): Show c.-3341_-3334delCCTTCCTT	NQO2	ENSG00000124588.22	transcript	ENST00000380455.11	protein_coding		3064		chr6	TogoVar
NQO2_chr6_2994894_3024755	2996886	CCTTCCTT others(1): Show CCTTCCTTT	C C	upstream_gene_variant upstream_gene_variant	MODIFIER	HG00099.hp2 HG00639.hp2 HG00741.hp1 others(30): Show HG00099.hp2 HG00639.hp2 HG00741.hp1 HG01167.hp1 HG01169.hp2 HG01884.hp1 HG02451.hp2 HG02559.hp2 HG02615.hp2 HG02622.hp1 HG02630.hp1 HG02630.hp2 HG02647.hp1 HG02895.hp1 HG02896.hp2 HG02922.hp1 HG02922.hp2 HG03041.hp2 HG03130.hp1 HG03453.hp1 HG03471.hp2 HG03540.hp1 HG03579.hp1 HG03654.hp1 HG06807.hp1 NA18942.hp1 NA18943.hp1 NA18944.hp1 NA18956.hp1 NA19007.hp2 NA19076.hp2 NA19080.hp1 NA20805.hp2	a0001 a0001	a0001c0001 a0001c0003 a0001c0005 a0001c0001 a0001c0003 a0001c0005	a0001c0001t0001 a0001c0001t0002 a0001c0001t0003 others(5): Show a0001c0001t0001 a0001c0001t0002 a0001c0001t0003 a0001c0001t0004 a0001c0003t0001 a0001c0003t0002 a0001c0003t0005 a0001c0005t0001	a0001c0001t0001g0016 a0001c0001t0001g0027 a0001c0001t0001g0050 others(23): Show a0001c0001t0001g0016 a0001c0001t0001g0027 a0001c0001t0001g0050 a0001c0001t0001g0123 a0001c0001t0001g0230 a0001c0001t0001g0231 a0001c0001t0001g0232 a0001c0001t0001g0235 a0001c0001t0001g0236 a0001c0001t0001g0240 a0001c0001t0002g0057 a0001c0001t0002g0222 a0001c0001t0003g0013 a0001c0001t0003g0140 a0001c0001t0003g0148 a0001c0001t0003g0160 a0001c0001t0003g0179 a0001c0001t0004g0015 a0001c0001t0004g0021 a0001c0001t0004g0044 a0001c0003t0001g0011 a0001c0003t0001g0132 a0001c0003t0002g0002 a0001c0003t0002g0204 a0001c0003t0005g0223 a0001c0005t0001g0022	33	446	0.0740	-8	c.-32 others(19): Show c.-3284_-3277delCTTCCTTT	NQO2	ENSG00000124588.22	transcript	ENST00000380455.11	protein_coding		3007		chr6	TogoVar
NQO2_chr6_2994894_3024755	3012946	CTTTTTTT others(1): Show CTTTTTTTT	C C	intron_variant intron_variant	MODIFIER	HG01192.hp2 HG02559.hp2 HG02615.hp2 others(4): Show HG01192.hp2 HG02559.hp2 HG02615.hp2 HG02886.hp1 HG02922.hp1 HG03540.hp2 NA18991.hp2	a0001 a0001	a0001c0001 a0001c0003 a0001c0001 a0001c0003	a0001c0001t0001 a0001c0003t0001 a0001c0003t0002 a0001c0001t0001 a0001c0003t0001 a0001c0003t0002	a0001c0001t0001g0106 a0001c0003t0001g0011 a0001c0003t0001g0133 others(1): Show a0001c0001t0001g0106 a0001c0003t0001g0011 a0001c0003t0001g0133 a0001c0003t0002g0205	7	446	0.0157	-8	c.303 others(23): Show c.303+292_303+299delTTTTTTTT	NQO2	ENSG00000124588.22	transcript	ENST00000380455.11	protein_coding	4/6		INFO_REALIGN_3_PRIME	chr6	TogoVar
NR0B1_chrX_30299206_30314390	30301308	GAGGGAGG others(1): Show GAGGGAGGA	G G	downstream_gene_variant downstream_gene_variant	MODIFIER	HG02602.hp1 HG02602.hp1	a0001 a0001	a0001c0003 a0001c0003	a0001c0003t0001 a0001c0003t0001	a0001c0003t0001g0029 a0001c0003t0001g0029	1	322	0.0031	-8	c.32 others(19): Show c.3263_*3270delTCCTCCCT	NR0B1	ENSG00000169297.8	transcript	ENST00000378970.5	protein_coding		2897		chrX	TogoVar
NR0B1_chrX_30299206_30314390	30306577	ATGTGTGT others(1): Show ATGTGTGTG	A A	intron_variant intron_variant	MODIFIER	HG01884.hp1 HG02622.hp1 HG01884.hp1 HG02622.hp1	a0001 a0001	a0001c0002 a0001c0013 a0001c0002 a0001c0013	a0001c0002t0001 a0001c0013t0001 a0001c0002t0001 a0001c0013t0001	a0001c0002t0001g0073 a0001c0013t0001g0053 a0001c0002t0001g0073 a0001c0013t0001g0053	2	322	0.0062	-8	c.116 others(27): Show c.1168+1611_1168+1618delCACACACA	NR0B1	ENSG00000169297.8	transcript	ENST00000378970.5	protein_coding	1/1			chrX	TogoVar
NR0B1_chrX_30299206_30314390	30310757	TTTCCTTC others(1): Show TTTCCTTCC	T T	upstream_gene_variant upstream_gene_variant	MODIFIER	HG01167.hp1 HG01169.hp2 HG02486.hp1 others(5): Show HG01167.hp1 HG01169.hp2 HG02486.hp1 HG02622.hp2 HG03098.hp1 HG03130.hp1 HG03139.hp1 HG03490.hp1	a0001 a0001	a0001c0001 a0001c0002 a0001c0003 a0001c0001 a0001c0002 a0001c0003	a0001c0001t0001 a0001c0002t0001 a0001c0003t0001 a0001c0001t0001 a0001c0002t0001 a0001c0003t0001	a0001c0001t0001g0018 a0001c0002t0001g0008 a0001c0002t0001g0019 others(2): Show a0001c0001t0001g0018 a0001c0002t0001g0008 a0001c0002t0001g0019 a0001c0002t0001g0028 a0001c0003t0001g0009	8	322	0.0248	-8	c.-14 others(19): Show c.-1402_-1395delGGAAGGAA	NR0B1	ENSG00000169297.8	transcript	ENST00000378970.5	protein_coding		1368		chrX	TogoVar
NR0B1_chrX_30299206_30314390	30310798	TTCCTTTC others(1): Show TTCCTTTCC	T T	upstream_gene_variant upstream_gene_variant	MODIFIER	HG00280.hp1 HG00280.hp1	a0001 a0001	a0001c0002 a0001c0002	a0001c0002t0001 a0001c0002t0001	a0001c0002t0001g0001 a0001c0002t0001g0001	1	322	0.0031	-8	c.-14 others(19): Show c.-1443_-1436delGGAAAGGA	NR0B1	ENSG00000169297.8	transcript	ENST00000378970.5	protein_coding		1409		chrX	TogoVar
NR0B1_chrX_30299206_30314390	30310831	TTTCCTTC others(1): Show TTTCCTTCC	T T	upstream_gene_variant upstream_gene_variant	MODIFIER	HG00639.hp2 HG02451.hp2 HG04199.hp1 others(1): Show HG00639.hp2 HG02451.hp2 HG04199.hp1 HG06807.hp2	a0001 a0007 a0001 a0007	a0001c0002 a0007c0014 a0001c0002 a0007c0014	a0001c0002t0001 a0007c0014t0001 a0001c0002t0001 a0007c0014t0001	a0001c0002t0001g0001 a0001c0002t0001g0064 a0001c0002t0001g0066 others(1): Show a0001c0002t0001g0001 a0001c0002t0001g0064 a0001c0002t0001g0066 a0007c0014t0001g0074	4	322	0.0124	-8	c.-14 others(19): Show c.-1476_-1469delGGAAGGAA	NR0B1	ENSG00000169297.8	transcript	ENST00000378970.5	protein_coding		1442		chrX	TogoVar
NR0B1_chrX_30299206_30314390	30310857	TCCTCCCT others(1): Show TCCTCCCTC	T T	upstream_gene_variant upstream_gene_variant	MODIFIER	NA20752.hp1 NA20752.hp1	a0001 a0001	a0001c0002 a0001c0002	a0001c0002t0001 a0001c0002t0001	a0001c0002t0001g0008 a0001c0002t0001g0008	1	322	0.0031	-8	c.-15 others(19): Show c.-1502_-1495delGAGGGAGG	NR0B1	ENSG00000169297.8	transcript	ENST00000378970.5	protein_coding		1468		chrX	TogoVar
NR1D2_chr3_23940286_23985617	23953342	CAAAAAAA others(1): Show CAAAAAAAA	C C	intron_variant intron_variant	MODIFIER	HG01123.hp1 HG01192.hp1 HG01358.hp2 others(32): Show HG01123.hp1 HG01192.hp1 HG01358.hp2 HG01891.hp1 HG01934.hp1 HG01943.hp1 HG01975.hp2 HG02257.hp2 HG02273.hp2 HG02300.hp2 HG02622.hp1 HG02630.hp1 HG02723.hp2 HG02735.hp1 HG02895.hp1 HG02896.hp1 HG02897.hp2 HG02965.hp1 HG02965.hp2 HG03017.hp2 HG03041.hp1 HG03098.hp1 HG03130.hp2 HG03471.hp1 HG03490.hp2 HG03579.hp1 HG03704.hp1 HG03942.hp1 HG04184.hp1 HG04199.hp2 HG04204.hp1 NA18522.hp2 NA18906.hp2 NA18981.hp1 NA20905.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0005 a0001c0001t0012 a0001c0001t0015 others(2): Show a0001c0001t0005 a0001c0001t0012 a0001c0001t0015 a0001c0001t0027 a0001c0001t0028	a0001c0001t0005g0030 a0001c0001t0005g0031 a0001c0001t0005g0274 others(30): Show a0001c0001t0005g0030 a0001c0001t0005g0031 a0001c0001t0005g0274 a0001c0001t0005g0275 a0001c0001t0005g0281 a0001c0001t0005g0282 a0001c0001t0005g0285 a0001c0001t0005g0286 a0001c0001t0005g0287 a0001c0001t0005g0288 a0001c0001t0005g0289 a0001c0001t0005g0290 a0001c0001t0005g0291 a0001c0001t0005g0292 a0001c0001t0005g0293 a0001c0001t0005g0294 a0001c0001t0005g0295 a0001c0001t0005g0296 a0001c0001t0005g0297 a0001c0001t0005g0298 a0001c0001t0005g0301 a0001c0001t0005g0302 a0001c0001t0005g0303 a0001c0001t0005g0304 a0001c0001t0005g0305 a0001c0001t0005g0306 a0001c0001t0005g0315 a0001c0001t0012g0279 a0001c0001t0012g0280 a0001c0001t0015g0284 a0001c0001t0015g0300 a0001c0001t0027g0307 a0001c0001t0028g0283	35	380	0.0921	-8	c.17- others(23): Show c.17-1173_17-1166delAAAAAAAA	NR1D2	ENSG00000174738.13	transcript	ENST00000312521.9	protein_coding	1/7		INFO_REALIGN_3_PRIME	chr3	TogoVar
NR1H3_chr11_47252996_47274033	47255537	TTCTTTTT others(1): Show TTCTTTTTC	T T	upstream_gene_variant upstream_gene_variant	MODIFIER	HG00323.hp1 HG00639.hp1 HG00738.hp2 others(12): Show HG00323.hp1 HG00639.hp1 HG00738.hp2 HG01074.hp1 HG01891.hp1 HG01981.hp2 HG02040.hp2 HG02683.hp1 HG02683.hp2 HG03654.hp2 HG03704.hp2 HG04115.hp2 NA18971.hp2 NA19068.hp1 NA20752.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0001 a0001c0001t0001g0026 a0001c0001t0001g0047 others(3): Show a0001c0001t0001g0001 a0001c0001t0001g0026 a0001c0001t0001g0047 a0001c0001t0001g0072 a0001c0001t0001g0073 a0001c0001t0001g0086	15	368	0.0408	-8	c.-26 others(19): Show c.-2629_-2622delTCTTTTTC	NR1H3	ENSG00000025434.19	transcript	ENST00000441012.7	protein_coding		2458		chr11	TogoVar
NR1H3_chr11_47252996_47274033	47255541	TTTTCTTT others(1): Show TTTTCTTTC	T T	upstream_gene_variant upstream_gene_variant	MODIFIER	HG00597.hp1 HG00597.hp2 HG01934.hp1 others(14): Show HG00597.hp1 HG00597.hp2 HG01934.hp1 HG02300.hp2 HG02896.hp2 HG06807.hp2 NA18957.hp1 NA18957.hp2 NA18998.hp1 NA18999.hp1 NA19058.hp1 NA19060.hp1 NA19077.hp2 NA19080.hp1 NA19090.hp2 NA19091.hp1 NA19240.hp1	a0001 a0002 a0001 a0002	a0001c0001 a0001c0002 a0002c0003 a0001c0001 a0001c0002 a0002c0003	a0001c0001t0001 a0001c0002t0001 a0001c0002t0002 others(2): Show a0001c0001t0001 a0001c0002t0001 a0001c0002t0002 a0001c0002t0005 a0002c0003t0001	a0001c0001t0001g0001 a0001c0001t0001g0014 a0001c0001t0001g0052 others(8): Show a0001c0001t0001g0001 a0001c0001t0001g0014 a0001c0001t0001g0052 a0001c0002t0001g0002 a0001c0002t0001g0006 a0001c0002t0001g0055 a0001c0002t0001g0064 a0001c0002t0001g0069 a0001c0002t0002g0002 a0001c0002t0005g0071 a0002c0003t0001g0002	17	368	0.0462	-8	c.-26 others(19): Show c.-2625_-2618delTTTCTTTC	NR1H3	ENSG00000025434.19	transcript	ENST00000441012.7	protein_coding		2454		chr11	TogoVar
NR1H3_chr11_47252996_47274033	47255591	TTCTTTCT others(1): Show TTCTTTCTC	T T	upstream_gene_variant upstream_gene_variant	MODIFIER	HG01981.hp1 HG02273.hp1 HG03491.hp1 others(4): Show HG01981.hp1 HG02273.hp1 HG03491.hp1 HG03492.hp1 HG03688.hp2 NA18942.hp2 NA19081.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0001 a0001c0001t0001g0038 a0001c0001t0001g0080 others(1): Show a0001c0001t0001g0001 a0001c0001t0001g0038 a0001c0001t0001g0080 a0001c0001t0001g0096	7	368	0.0190	-8	c.-25 others(19): Show c.-2575_-2568delTCTTTCTC	NR1H3	ENSG00000025434.19	transcript	ENST00000441012.7	protein_coding		2404		chr11	TogoVar
NR1H3_chr11_47252996_47274033	47255615	CTCTTTCT others(1): Show CTCTTTCTT	C C	upstream_gene_variant upstream_gene_variant	MODIFIER	HG01069.hp1 HG01071.hp2 HG02280.hp1 others(7): Show HG01069.hp1 HG01071.hp2 HG02280.hp1 HG02486.hp1 HG03453.hp1 HG03516.hp1 HG03831.hp2 HG04228.hp2 NA18943.hp2 NA19004.hp1	a0001 a0001	a0001c0001 a0001c0002 a0001c0001 a0001c0002	a0001c0001t0001 a0001c0002t0001 a0001c0001t0001 a0001c0002t0001	a0001c0001t0001g0001 a0001c0001t0001g0008 a0001c0001t0001g0010 others(5): Show a0001c0001t0001g0001 a0001c0001t0001g0008 a0001c0001t0001g0010 a0001c0001t0001g0037 a0001c0001t0001g0040 a0001c0001t0001g0082 a0001c0002t0001g0002 a0001c0002t0001g0034	10	368	0.0272	-8	c.-25 others(19): Show c.-2551_-2544delTCTTTCTT	NR1H3	ENSG00000025434.19	transcript	ENST00000441012.7	protein_coding		2380		chr11	TogoVar
NR1H3_chr11_47252996_47274033	47271445	ATCTCAGG others(1): Show ATCTCAGGG	A A	downstream_gene_variant downstream_gene_variant	MODIFIER	HG01070.hp2 HG01071.hp1 HG04199.hp2 HG01070.hp2 HG01071.hp1 HG04199.hp2	a0001 a0001	a0001c0002 a0001c0002	a0001c0002t0002 a0001c0002t0002	a0001c0002t0002g0002 a0001c0002t0002g0002	3	368	0.0082	-8	c.27 others(19): Show c.2750_*2757delTCTCAGGG	NR1H3	ENSG00000025434.19	transcript	ENST00000441012.7	protein_coding		2413		chr11	TogoVar
NR1H4_chr12_100468866_100569414	100513801	AAAGGAAG others(1): Show AAAGGAAGG	A A	intron_variant intron_variant	MODIFIER	HG00642.hp1 HG00738.hp1 HG00738.hp2 others(31): Show HG00642.hp1 HG00738.hp1 HG00738.hp2 HG01069.hp1 HG01099.hp2 HG01258.hp1 HG01358.hp1 HG01358.hp2 HG01361.hp1 HG01496.hp1 HG01496.hp2 HG02074.hp2 HG02135.hp2 HG02145.hp2 HG02602.hp2 HG02615.hp1 HG02622.hp1 HG02622.hp2 HG02698.hp2 HG03195.hp2 HG03471.hp2 HG03486.hp2 HG03491.hp1 HG03579.hp1 HG03710.hp1 HG03831.hp1 HG04228.hp1 HG04228.hp2 NA18906.hp2 NA18946.hp1 NA18960.hp2 NA18967.hp1 NA18983.hp2 NA20905.hp2	a0001 a0003 a0001 a0003	a0001c0001 a0003c0005 a0001c0001 a0003c0005	a0001c0001t0001 a0001c0001t0003 a0001c0001t0006 others(1): Show a0001c0001t0001 a0001c0001t0003 a0001c0001t0006 a0003c0005t0001	a0001c0001t0001g0003 a0001c0001t0001g0012 a0001c0001t0001g0022 others(30): Show a0001c0001t0001g0003 a0001c0001t0001g0012 a0001c0001t0001g0022 a0001c0001t0001g0026 a0001c0001t0001g0062 a0001c0001t0001g0063 a0001c0001t0001g0076 a0001c0001t0001g0102 a0001c0001t0001g0109 a0001c0001t0001g0133 a0001c0001t0001g0140 a0001c0001t0001g0147 a0001c0001t0001g0148 a0001c0001t0001g0150 a0001c0001t0001g0161 a0001c0001t0001g0175 a0001c0001t0001g0224 a0001c0001t0001g0259 a0001c0001t0001g0265 a0001c0001t0001g0266 a0001c0001t0001g0267 a0001c0001t0001g0268 a0001c0001t0001g0270 a0001c0001t0001g0286 a0001c0001t0001g0287 a0001c0001t0001g0288 a0001c0001t0001g0296 a0001c0001t0001g0297 a0001c0001t0001g0298 a0001c0001t0001g0301 a0001c0001t0003g0240 a0001c0001t0006g0271 a0003c0005t0001g0260	34	308	0.1104	-8	c.445 others(25): Show c.445+2721_445+2728delGGAAGGAA	NR1H4	ENSG00000012504.15	transcript	ENST00000392986.8	protein_coding	4/10		INFO_REALIGN_3_PRIME	chr12	TogoVar
NR1H4_chr12_100468866_100569414	100547705	TTTTATTT others(1): Show TTTTATTTA	T T	intron_variant intron_variant	MODIFIER	HG00280.hp2 HG00642.hp1 HG00642.hp2 others(33): Show HG00280.hp2 HG00642.hp1 HG00642.hp2 HG00738.hp2 HG01074.hp2 HG01099.hp2 HG01255.hp2 HG01884.hp1 HG02055.hp1 HG02109.hp2 HG02486.hp1 HG02602.hp2 HG02622.hp2 HG02647.hp2 HG02735.hp1 HG02809.hp1 HG02818.hp2 HG02886.hp1 HG02896.hp1 HG02897.hp2 HG02922.hp1 HG03017.hp1 HG03017.hp2 HG03098.hp1 HG03195.hp1 HG03239.hp1 HG03471.hp2 HG03486.hp2 HG03491.hp2 HG03516.hp1 HG04204.hp2 NA18522.hp1 NA18906.hp2 NA18946.hp1 NA18983.hp2 NA19043.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0002 a0001c0001t0003 a0001c0001t0001 a0001c0001t0002 a0001c0001t0003	a0001c0001t0001g0012 a0001c0001t0001g0022 a0001c0001t0001g0023 others(33): Show a0001c0001t0001g0012 a0001c0001t0001g0022 a0001c0001t0001g0023 a0001c0001t0001g0025 a0001c0001t0001g0026 a0001c0001t0001g0032 a0001c0001t0001g0062 a0001c0001t0001g0063 a0001c0001t0001g0098 a0001c0001t0001g0100 a0001c0001t0001g0104 a0001c0001t0001g0167 a0001c0001t0001g0169 a0001c0001t0001g0170 a0001c0001t0001g0171 a0001c0001t0001g0172 a0001c0001t0001g0173 a0001c0001t0001g0175 a0001c0001t0001g0179 a0001c0001t0001g0212 a0001c0001t0001g0224 a0001c0001t0001g0225 a0001c0001t0001g0226 a0001c0001t0001g0236 a0001c0001t0001g0257 a0001c0001t0001g0269 a0001c0001t0001g0273 a0001c0001t0001g0279 a0001c0001t0001g0287 a0001c0001t0001g0296 a0001c0001t0001g0300 a0001c0001t0002g0068 a0001c0001t0003g0174 a0001c0001t0003g0240 a0001c0001t0003g0241 a0001c0001t0003g0258	36	308	0.1169	-8	c.107 others(27): Show c.1078+6911_1078+6918delATTTATTT	NR1H4	ENSG00000012504.15	transcript	ENST00000392986.8	protein_coding	9/10		INFO_REALIGN_3_PRIME	chr12	TogoVar
NR1H4_chr12_100468866_100569414	100558349	CAAAAAAA others(1): Show CAAAAAAAA	C C	intron_variant intron_variant	MODIFIER	HG00140.hp1 HG00280.hp1 HG00323.hp1 others(87): Show HG00140.hp1 HG00280.hp1 HG00323.hp1 HG00323.hp2 HG00408.hp1 HG00609.hp2 HG00642.hp1 HG00673.hp1 HG00735.hp2 HG00738.hp1 HG01074.hp2 HG01109.hp1 HG01169.hp1 HG01169.hp2 HG01255.hp1 HG01261.hp1 HG01261.hp2 HG01346.hp2 HG01433.hp2 HG01496.hp1 HG01516.hp2 HG01952.hp1 HG01993.hp1 HG01993.hp2 HG02040.hp1 HG02055.hp2 HG02071.hp1 HG02074.hp2 HG02109.hp1 HG02132.hp2 HG02145.hp2 HG02155.hp1 HG02257.hp2 HG02300.hp1 HG02602.hp1 HG02622.hp1 HG02698.hp2 HG02895.hp2 HG02896.hp2 HG02922.hp1 HG02965.hp1 HG02965.hp2 HG03130.hp2 HG03139.hp1 HG03209.hp1 HG03239.hp2 HG03453.hp2 HG03579.hp1 HG03688.hp1 HG03704.hp1 HG03704.hp2 HG03710.hp2 HG03831.hp1 HG03834.hp1 HG03942.hp1 HG04115.hp1 HG04115.hp2 HG04228.hp2 HG06807.hp1 HG06807.hp2 NA18522.hp1 NA18940.hp1 NA18941.hp1 NA18957.hp1 NA18966.hp1 NA18968.hp1 NA18971.hp1 NA18971.hp2 NA18975.hp1 NA18977.hp2 NA18979.hp1 NA18985.hp2 NA18990.hp1 NA19002.hp1 NA19012.hp2 NA19056.hp1 NA19060.hp1 NA19063.hp2 NA19064.hp1 NA19066.hp2 NA19067.hp1 NA19068.hp2 NA19074.hp2 NA19079.hp2 NA19086.hp2 NA19090.hp2 NA19240.hp2 NA20905.hp1 NA20905.hp2 homoSapiens_chm13v2.hp1	a0001 a0002 a0004 others(1): Show a0001 a0002 a0004 a0007	a0001c0001 a0001c0008 a0001c0010 others(3): Show a0001c0001 a0001c0008 a0001c0010 a0002c0002 a0004c0007 a0007c0004	a0001c0001t0001 a0001c0001t0002 a0001c0001t0006 others(5): Show a0001c0001t0001 a0001c0001t0002 a0001c0001t0006 a0001c0008t0005 a0001c0010t0001 a0002c0002t0001 a0004c0007t0001 a0007c0004t0001	a0001c0001t0001g0005 a0001c0001t0001g0011 a0001c0001t0001g0021 others(86): Show a0001c0001t0001g0005 a0001c0001t0001g0011 a0001c0001t0001g0021 a0001c0001t0001g0024 a0001c0001t0001g0070 a0001c0001t0001g0071 a0001c0001t0001g0076 a0001c0001t0001g0078 a0001c0001t0001g0084 a0001c0001t0001g0093 a0001c0001t0001g0094 a0001c0001t0001g0095 a0001c0001t0001g0096 a0001c0001t0001g0099 a0001c0001t0001g0100 a0001c0001t0001g0104 a0001c0001t0001g0109 a0001c0001t0001g0110 a0001c0001t0001g0112 a0001c0001t0001g0115 a0001c0001t0001g0116 a0001c0001t0001g0140 a0001c0001t0001g0141 a0001c0001t0001g0146 a0001c0001t0001g0160 a0001c0001t0001g0161 a0001c0001t0001g0162 a0001c0001t0001g0163 a0001c0001t0001g0164 a0001c0001t0001g0165 a0001c0001t0001g0181 a0001c0001t0001g0182 a0001c0001t0001g0184 a0001c0001t0001g0187 a0001c0001t0001g0188 a0001c0001t0001g0189 a0001c0001t0001g0190 a0001c0001t0001g0192 a0001c0001t0001g0198 a0001c0001t0001g0199 a0001c0001t0001g0201 a0001c0001t0001g0202 a0001c0001t0001g0205 a0001c0001t0001g0206 a0001c0001t0001g0207 a0001c0001t0001g0208 a0001c0001t0001g0210 a0001c0001t0001g0211 a0001c0001t0001g0212 a0001c0001t0001g0218 a0001c0001t0001g0223 a0001c0001t0001g0227 a0001c0001t0001g0228 a0001c0001t0001g0229 a0001c0001t0001g0230 a0001c0001t0001g0231 a0001c0001t0001g0232 a0001c0001t0001g0233 a0001c0001t0001g0234 a0001c0001t0001g0242 a0001c0001t0001g0246 a0001c0001t0001g0248 a0001c0001t0001g0256 a0001c0001t0001g0265 a0001c0001t0001g0266 a0001c0001t0001g0274 a0001c0001t0001g0275 a0001c0001t0001g0278 a0001c0001t0001g0284 a0001c0001t0001g0285 a0001c0001t0001g0286 a0001c0001t0001g0288 a0001c0001t0001g0289 a0001c0001t0001g0290 a0001c0001t0001g0293 a0001c0001t0001g0294 a0001c0001t0001g0296 a0001c0001t0001g0298 a0001c0001t0002g0035 a0001c0001t0002g0047 a0001c0001t0002g0059 a0001c0001t0002g0067 a0001c0001t0006g0271 a0001c0008t0005g0281 a0001c0010t0001g0191 a0002c0002t0001g0006 a0002c0002t0001g0007 a0004c0007t0001g0197 a0007c0004t0001g0166	90	308	0.2922	-8	c.107 others(27): Show c.1079-3516_1079-3509delAAAAAAAA	NR1H4	ENSG00000012504.15	transcript	ENST00000392986.8	protein_coding	9/10		INFO_REALIGN_3_PRIME	chr12	TogoVar
NR1I2_chr3_119777101_119823487	119787657	ATGTGTGT others(1): Show ATGTGTGTG	A A	intron_variant intron_variant	MODIFIER	HG00280.hp1 HG00621.hp2 HG00639.hp2 others(79): Show HG00280.hp1 HG00621.hp2 HG00639.hp2 HG00642.hp1 HG00642.hp2 HG00733.hp1 HG00735.hp2 HG00738.hp1 HG00741.hp2 HG01069.hp1 HG01106.hp1 HG01106.hp2 HG01123.hp1 HG01169.hp2 HG01192.hp1 HG01243.hp2 HG01255.hp2 HG01256.hp2 HG01261.hp2 HG01884.hp1 HG01891.hp1 HG01943.hp1 HG02027.hp2 HG02074.hp1 HG02129.hp2 HG02135.hp1 HG02155.hp1 HG02165.hp1 HG02257.hp1 HG02280.hp1 HG02451.hp2 HG02572.hp1 HG02602.hp2 HG02615.hp2 HG02622.hp2 HG02630.hp1 HG02630.hp2 HG02647.hp1 HG02698.hp2 HG02717.hp2 HG02723.hp1 HG02809.hp1 HG02818.hp1 HG02818.hp2 HG02895.hp2 HG02896.hp1 HG02976.hp1 HG02976.hp2 HG03017.hp2 HG03041.hp2 HG03139.hp1 HG03209.hp2 HG03225.hp2 HG03453.hp1 HG03453.hp2 HG03486.hp2 HG03491.hp2 HG03492.hp2 HG03654.hp2 HG03927.hp1 HG03927.hp2 HG03942.hp1 HG04204.hp2 HG04228.hp1 HG06807.hp2 NA18747.hp2 NA18942.hp2 NA18951.hp2 NA18960.hp2 NA18961.hp2 NA18980.hp1 NA18984.hp1 NA18987.hp1 NA18989.hp2 NA19056.hp2 NA19057.hp1 NA20129.hp2 NA20300.hp2 NA20805.hp1 NA20805.hp2 NA20905.hp1 NA21309.hp1	a0001 a0001	a0001c0001 a0001c0002 a0001c0003 others(1): Show a0001c0001 a0001c0002 a0001c0003 a0001c0006	a0001c0001t0001 a0001c0001t0002 a0001c0001t0003 others(14): Show a0001c0001t0001 a0001c0001t0002 a0001c0001t0003 a0001c0001t0004 a0001c0001t0005 a0001c0001t0006 a0001c0001t0007 a0001c0001t0009 a0001c0001t0011 a0001c0001t0012 a0001c0001t0016 a0001c0001t0024 a0001c0001t0029 a0001c0002t0002 a0001c0002t0008 a0001c0003t0002 a0001c0006t0012	a0001c0001t0001g0140 a0001c0001t0001g0155 a0001c0001t0001g0212 others(72): Show a0001c0001t0001g0140 a0001c0001t0001g0155 a0001c0001t0001g0212 a0001c0001t0001g0304 a0001c0001t0001g0306 a0001c0001t0001g0309 a0001c0001t0001g0313 a0001c0001t0001g0314 a0001c0001t0001g0315 a0001c0001t0002g0005 a0001c0001t0002g0006 a0001c0001t0002g0032 a0001c0001t0002g0036 a0001c0001t0002g0098 a0001c0001t0002g0106 a0001c0001t0002g0107 a0001c0001t0002g0108 a0001c0001t0002g0112 a0001c0001t0002g0113 a0001c0001t0002g0123 a0001c0001t0002g0344 a0001c0001t0002g0345 a0001c0001t0002g0346 a0001c0001t0002g0351 a0001c0001t0002g0358 a0001c0001t0003g0148 a0001c0001t0003g0149 a0001c0001t0003g0152 a0001c0001t0003g0210 a0001c0001t0003g0211 a0001c0001t0003g0308 a0001c0001t0003g0310 a0001c0001t0003g0312 a0001c0001t0003g0378 a0001c0001t0003g0379 a0001c0001t0004g0031 a0001c0001t0004g0104 a0001c0001t0004g0105 a0001c0001t0004g0111 a0001c0001t0004g0114 a0001c0001t0004g0348 a0001c0001t0004g0349 a0001c0001t0005g0109 a0001c0001t0005g0110 a0001c0001t0005g0116 a0001c0001t0005g0121 a0001c0001t0006g0013 a0001c0001t0006g0150 a0001c0001t0006g0151 a0001c0001t0006g0153 a0001c0001t0006g0154 a0001c0001t0007g0126 a0001c0001t0007g0320 a0001c0001t0007g0352 a0001c0001t0009g0037 a0001c0001t0009g0334 a0001c0001t0009g0335 a0001c0001t0011g0025 a0001c0001t0011g0305 a0001c0001t0011g0311 a0001c0001t0012g0125 a0001c0001t0012g0328 a0001c0001t0012g0329 a0001c0001t0016g0307 a0001c0001t0024g0115 a0001c0001t0029g0340 a0001c0002t0002g0354 a0001c0002t0002g0355 a0001c0002t0002g0356 a0001c0002t0002g0357 a0001c0002t0008g0001 a0001c0002t0008g0342 a0001c0002t0008g0353 a0001c0003t0002g0124 a0001c0006t0012g0122	82	416	0.1971	-8	c.-23 others(25): Show c.-23+5400_-23+5407delTGTGTGTG	NR1I2	ENSG00000144852.20	transcript	ENST00000393716.8	protein_coding	1/8		INFO_REALIGN_3_PRIME	chr3	TogoVar
NR1I3_chr1_161224669_161243203	161225919	CTTTTTTT others(1): Show CTTTTTTTT	C C	downstream_gene_variant downstream_gene_variant	MODIFIER	HG00280.hp1 HG00408.hp1 HG00438.hp1 others(65): Show HG00280.hp1 HG00408.hp1 HG00438.hp1 HG00438.hp2 HG00544.hp2 HG00673.hp2 HG00735.hp2 HG01070.hp1 HG01175.hp1 HG01255.hp2 HG02004.hp2 HG02071.hp1 HG02109.hp1 HG02300.hp1 HG02523.hp1 HG02738.hp1 HG03017.hp1 HG03491.hp1 HG03688.hp1 HG03688.hp2 HG03710.hp1 HG03927.hp1 HG04115.hp2 HG04199.hp1 HG04204.hp1 HG04228.hp1 NA18747.hp2 NA18939.hp1 NA18940.hp2 NA18947.hp2 NA18948.hp1 NA18952.hp2 NA18954.hp2 NA18957.hp1 NA18959.hp2 NA18960.hp1 NA18966.hp1 NA18967.hp2 NA18968.hp1 NA18969.hp1 NA18970.hp2 NA18974.hp2 NA18977.hp1 NA18978.hp2 NA18982.hp1 NA18983.hp2 NA18986.hp1 NA18986.hp2 NA18988.hp2 NA18992.hp2 NA18994.hp2 NA19003.hp1 NA19007.hp2 NA19009.hp2 NA19011.hp1 NA19011.hp2 NA19059.hp1 NA19060.hp2 NA19065.hp1 NA19067.hp2 NA19074.hp1 NA19075.hp2 NA19081.hp2 NA19082.hp2 NA19086.hp2 NA19090.hp2 NA19091.hp1 NA20805.hp1	a0001 a0006 a0001 a0006	a0001c0002 a0006c0008 a0001c0002 a0006c0008	a0001c0002t0001 a0006c0008t0001 a0001c0002t0001 a0006c0008t0001	a0001c0002t0001g0001 a0001c0002t0001g0015 a0001c0002t0001g0021 others(26): Show a0001c0002t0001g0001 a0001c0002t0001g0015 a0001c0002t0001g0021 a0001c0002t0001g0025 a0001c0002t0001g0038 a0001c0002t0001g0039 a0001c0002t0001g0040 a0001c0002t0001g0041 a0001c0002t0001g0042 a0001c0002t0001g0043 a0001c0002t0001g0044 a0001c0002t0001g0046 a0001c0002t0001g0047 a0001c0002t0001g0048 a0001c0002t0001g0076 a0001c0002t0001g0079 a0001c0002t0001g0080 a0001c0002t0001g0081 a0001c0002t0001g0085 a0001c0002t0001g0086 a0001c0002t0001g0087 a0001c0002t0001g0088 a0001c0002t0001g0092 a0001c0002t0001g0093 a0001c0002t0001g0094 a0001c0002t0001g0095 a0001c0002t0001g0167 a0001c0002t0001g0194 a0006c0008t0001g0084	68	436	0.1560	-8	c.38 others(19): Show c.3870_*3877delAAAAAAAA	NR1I3	ENSG00000143257.12	transcript	ENST00000367983.9	protein_coding		3749		chr1	TogoVar
NR1I3_chr1_161224669_161243203	161233835	ATATGTGT others(1): Show ATATGTGTG	A A	intron_variant intron_variant	MODIFIER	HG02109.hp2 HG02647.hp2 HG02683.hp1 others(3): Show HG02109.hp2 HG02647.hp2 HG02683.hp1 NA18957.hp2 NA19043.hp2 NA19090.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0023 a0001c0001t0001g0169 a0001c0001t0001g0180 a0001c0001t0001g0023 a0001c0001t0001g0169 a0001c0001t0001g0180	6	436	0.0138	-8	c.239 others(23): Show c.239-505_239-498delCACACATA	NR1I3	ENSG00000143257.12	transcript	ENST00000367983.9	protein_coding	3/8			chr1	TogoVar
NR1I3_chr1_161224669_161243203	161233837	ATGTGTGT others(1): Show ATGTGTGTG	A A	intron_variant intron_variant	MODIFIER	HG00733.hp1 HG00738.hp1 HG01069.hp1 others(10): Show HG00733.hp1 HG00738.hp1 HG01069.hp1 HG01071.hp1 HG03831.hp1 HG04204.hp2 NA18948.hp2 NA18967.hp1 NA19006.hp1 NA19030.hp1 NA19030.hp2 NA19054.hp2 NA19056.hp1	a0001 a0003 a0001 a0003	a0001c0001 a0001c0002 a0003c0004 a0001c0001 a0001c0002 a0003c0004	a0001c0001t0001 a0001c0002t0001 a0003c0004t0001 a0001c0001t0001 a0001c0002t0001 a0003c0004t0001	a0001c0001t0001g0063 a0001c0001t0001g0120 a0001c0001t0001g0145 others(6): Show a0001c0001t0001g0063 a0001c0001t0001g0120 a0001c0001t0001g0145 a0001c0001t0001g0148 a0001c0002t0001g0057 a0001c0002t0001g0059 a0001c0002t0001g0060 a0001c0002t0001g0123 a0003c0004t0001g0119	13	436	0.0298	-8	c.239 others(23): Show c.239-507_239-500delCACACACA	NR1I3	ENSG00000143257.12	transcript	ENST00000367983.9	protein_coding	3/8			chr1	TogoVar
NR2C1_chr12_95015229_95078618	95070182	AGTGCAGT others(1): Show AGTGCAGTG	A A	intron_variant intron_variant	MODIFIER	HG00609.hp2 HG00738.hp2 HG01175.hp2 others(14): Show HG00609.hp2 HG00738.hp2 HG01175.hp2 HG01255.hp1 HG01884.hp2 HG02280.hp2 HG02451.hp2 HG02698.hp2 HG03017.hp2 HG03225.hp1 HG03453.hp2 HG03491.hp1 HG03492.hp1 HG06807.hp2 NA19043.hp1 NA19043.hp2 NA21309.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0003 a0001c0001t0003	a0001c0001t0003g0378 a0001c0001t0003g0379 a0001c0001t0003g0380 others(14): Show a0001c0001t0003g0378 a0001c0001t0003g0379 a0001c0001t0003g0380 a0001c0001t0003g0381 a0001c0001t0003g0382 a0001c0001t0003g0383 a0001c0001t0003g0384 a0001c0001t0003g0385 a0001c0001t0003g0386 a0001c0001t0003g0387 a0001c0001t0003g0388 a0001c0001t0003g0389 a0001c0001t0003g0390 a0001c0001t0003g0391 a0001c0001t0003g0392 a0001c0001t0003g0393 a0001c0001t0003g0394	17	430	0.0395	-8	c.-7- others(23): Show c.-7-2799_-7-2792delCACTGCAC	NR2C1	ENSG00000120798.17	transcript	ENST00000333003.10	protein_coding	1/13			chr12	TogoVar
NR2C2AP_chr19_19196409_19208414	19200788	ATTTTTTT others(1): Show ATTTTTTTT	A A	downstream_gene_variant downstream_gene_variant	MODIFIER	HG00099.hp1 HG01099.hp2 HG01109.hp2 others(15): Show HG00099.hp1 HG01099.hp2 HG01109.hp2 HG01361.hp2 HG02258.hp1 HG02723.hp1 HG02723.hp2 HG02970.hp2 HG03225.hp1 HG03225.hp2 HG03579.hp1 HG03704.hp2 NA18906.hp2 NA18942.hp1 NA18969.hp1 NA19009.hp1 NA19074.hp1 NA19084.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0002 a0001c0001t0001 a0001c0001t0002	a0001c0001t0001g0001 a0001c0001t0001g0014 a0001c0001t0002g0002 a0001c0001t0001g0001 a0001c0001t0001g0014 a0001c0001t0002g0002	18	426	0.0423	-8	c.11 others(19): Show c.1129_*1136delAAAAAAAA	NR2C2AP	ENSG00000184162.15	transcript	ENST00000331552.12	protein_coding		620		chr19	TogoVar
NR2C2_chr3_14942583_15054273	14989924	CAAAAAAA others(1): Show CAAAAAAAA	C C	intron_variant intron_variant	MODIFIER	HG00140.hp1 HG00639.hp1 HG00642.hp2 others(17): Show HG00140.hp1 HG00639.hp1 HG00642.hp2 HG00733.hp1 HG01123.hp2 HG01515.hp1 HG01928.hp1 HG01975.hp2 HG01978.hp2 HG02083.hp2 HG02148.hp2 HG02559.hp1 HG03540.hp1 NA18949.hp1 NA18951.hp1 NA19085.hp2 NA19091.hp1 NA20129.hp2 NA20752.hp2 NA20905.hp1	a0001 a0001	a0001c0001 a0001c0003 a0001c0001 a0001c0003	a0001c0001t0003 a0001c0003t0006 a0001c0001t0003 a0001c0003t0006	a0001c0001t0003g0002 a0001c0001t0003g0008 a0001c0001t0003g0084 others(15): Show a0001c0001t0003g0002 a0001c0001t0003g0008 a0001c0001t0003g0084 a0001c0001t0003g0087 a0001c0001t0003g0088 a0001c0001t0003g0089 a0001c0001t0003g0090 a0001c0001t0003g0092 a0001c0001t0003g0093 a0001c0003t0006g0005 a0001c0003t0006g0250 a0001c0003t0006g0251 a0001c0003t0006g0252 a0001c0003t0006g0253 a0001c0003t0006g0254 a0001c0003t0006g0255 a0001c0003t0006g0256 a0001c0003t0006g0272	20	308	0.0649	-8	c.-39 others(27): Show c.-39-13930_-39-13923delAAAAAAAA	NR2C2	ENSG00000177463.16	transcript	ENST00000425241.6	protein_coding	1/13		INFO_REALIGN_3_PRIME	chr3	TogoVar
NR2C2_chr3_14942583_15054273	15029792	AATAGATA others(1): Show AATAGATAG	A A	intron_variant intron_variant	MODIFIER	HG00609.hp2 HG02698.hp2 HG03491.hp2 others(5): Show HG00609.hp2 HG02698.hp2 HG03491.hp2 HG03710.hp2 HG04199.hp2 NA18954.hp1 NA19000.hp2 NA20805.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0008 a0001c0001t0009 others(1): Show a0001c0001t0001 a0001c0001t0008 a0001c0001t0009 a0001c0001t0041	a0001c0001t0001g0153 a0001c0001t0001g0158 a0001c0001t0001g0188 others(5): Show a0001c0001t0001g0153 a0001c0001t0001g0158 a0001c0001t0001g0188 a0001c0001t0001g0209 a0001c0001t0001g0221 a0001c0001t0008g0192 a0001c0001t0009g0270 a0001c0001t0041g0159	8	308	0.0260	-8	c.933 others(23): Show c.933-439_933-432delGATAGATA	NR2C2	ENSG00000177463.16	transcript	ENST00000425241.6	protein_coding	8/13		INFO_REALIGN_3_PRIME	chr3	TogoVar
NR2E1_chr6_108161022_108193805	108184646	AGGGGTCC others(1): Show AGGGGTCCT	A A	intron_variant intron_variant	MODIFIER	HG02572.hp2 HG02717.hp1 HG03209.hp1 others(3): Show HG02572.hp2 HG02717.hp1 HG03209.hp1 HG03471.hp2 HG03579.hp1 NA19240.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0004 a0001c0001t0013 a0001c0001t0004 a0001c0001t0013	a0001c0001t0004g0030 a0001c0001t0004g0031 a0001c0001t0004g0106 others(1): Show a0001c0001t0004g0030 a0001c0001t0004g0031 a0001c0001t0004g0106 a0001c0001t0013g0195	6	392	0.0153	-8	c.996 others(25): Show c.996-2653_996-2646delGGGTCCTG	NR2E1	ENSG00000112333.12	transcript	ENST00000368986.9	protein_coding	8/8		INFO_REALIGN_3_PRIME	chr6	TogoVar
NR2E1_chr6_108161022_108193805	108188502	AACACACA others(1): Show AACACACAC	A A	3_prime_UTR_variant 3_prime_UTR_variant	MODIFIER	HG00408.hp1 HG00738.hp2 HG01099.hp2 others(7): Show HG00408.hp1 HG00738.hp2 HG01099.hp2 HG02451.hp1 HG02602.hp1 HG02647.hp2 HG02896.hp1 HG02897.hp1 HG03209.hp1 HG03579.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0013 a0001c0001t0029 a0001c0001t0013 a0001c0001t0029	a0001c0001t0013g0006 a0001c0001t0013g0011 a0001c0001t0013g0047 others(4): Show a0001c0001t0013g0006 a0001c0001t0013g0011 a0001c0001t0013g0047 a0001c0001t0013g0064 a0001c0001t0013g0192 a0001c0001t0013g0195 a0001c0001t0029g0176	10	392	0.0255	-8	c.10 others(19): Show c.1082_*1089delACACACAC	NR2E1	ENSG00000112333.12	transcript	ENST00000368986.9	protein_coding	9/9	1082	INFO_REALIGN_3_PRIME	chr6	TogoVar
NR2F1_chr5_93578222_93599611	93581668	GTCTCTCT others(1): Show GTCTCTCTC	G G	upstream_gene_variant upstream_gene_variant	MODIFIER	HG01928.hp2 HG03195.hp2 HG03579.hp2 others(3): Show HG01928.hp2 HG03195.hp2 HG03579.hp2 HG04115.hp1 NA18990.hp1 homoSapiens_chm13v2.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0002 a0001c0001t0009 a0001c0001t0001 a0001c0001t0002 a0001c0001t0009	a0001c0001t0001g0005 a0001c0001t0001g0006 a0001c0001t0001g0028 others(3): Show a0001c0001t0001g0005 a0001c0001t0001g0006 a0001c0001t0001g0028 a0001c0001t0002g0015 a0001c0001t0002g0020 a0001c0001t0009g0020	6	294	0.0204	-8	c.-33 others(19): Show c.-3355_-3348delTCTCTCTC	NR2F1	ENSG00000175745.15	transcript	ENST00000327111.8	protein_coding		1553		chr5	TogoVar
NR2F6_chr19_17226883_17250919	17246428	GACAGACA others(1): Show GACAGACAC	G G	upstream_gene_variant upstream_gene_variant	MODIFIER	HG02970.hp1 HG03225.hp1 NA19240.hp1 HG02970.hp1 HG03225.hp1 NA19240.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0012 a0001c0001t0001g0016 a0001c0001t0001g0012 a0001c0001t0001g0016	3	414	0.0073	-8	c.-12 others(19): Show c.-1216_-1209delGTGTCTGT	NR2F6	ENSG00000160113.6	transcript	ENST00000291442.4	protein_coding		510		chr19	TogoVar

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