| regionname | pos | ref | alt | annotation | impact | samples | ahapids | achapids | acthapids | actghapids | ac | an | af | len | hgvs_c | hgvs_p | genename | geneid | featuretype | featureid | transcript_biotype | rank | cdna cdna pos length
|
cds cds pos length
|
aa aa pos length
|
distance | status | chr | external |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| PGS1_chr17_78373649_78429659 | 78402397 | CATATATA others(1): Show |
C | intron_variant | MODIFIER | HG04228.hp2 NA19074.hp1 NA20752.hp1 |
a0001 | a0001c0002 | a0001c0002t0001a0001c0002t0002 | a0001c0002t0001g0064a0001c0002t0002g0065a0001c0002t0002g0076 | 3 | 398 | 0.0075 | -8 | c.881 others(25): Show |
PGS1 | ENSG00000087157.19 | transcript | ENST00000262764.11 | protein_coding | 6/9 | INFO_REALIGN_3_PRIME | chr17 | TogoVar | |||||
| PGS1_chr17_78373649_78429659 | 78410462 | CTTTTTTT others(1): Show |
C | intron_variant | MODIFIER | HG01109.hp1 HG01978.hp2 HG02004.hp1 others(4): Show |
a0001 | a0001c0001a0001c0002 | a0001c0001t0001a0001c0001t0002a0001c0002t0001others(1): Show | a0001c0001t0001g0108a0001c0001t0001g0265a0001c0001t0001g0353others(4): Show | 7 | 398 | 0.0176 | -8 | c.140 others(27): Show |
PGS1 | ENSG00000087157.19 | transcript | ENST00000262764.11 | protein_coding | 7/9 | INFO_REALIGN_3_PRIME | chr17 | TogoVar | |||||
| PHACTR1_chr6_12711767_13292837 | 12712497 | AAGAGAGA others(1): Show |
A | upstream_gene_variant | MODIFIER | HG01261.hp1 HG03492.hp1 |
a0001 | a0001c0001 | a0001c0001t0001a0001c0001t0002 | a0001c0001t0001g0090a0001c0001t0002g0072 | 2 | 108 | 0.0185 | -8 | c.-46 others(19): Show |
PHACTR1 | ENSG00000112137.19 | transcript | ENST00000332995.12 | protein_coding | 4269 | chr6 | TogoVar | ||||||
| PHACTR1_chr6_12711767_13292837 | 12730986 | TTTTATTT others(1): Show |
T | intron_variant | MODIFIER | HG01109.hp1 HG03225.hp1 HG06807.hp1 |
a0001 | a0001c0001 | a0001c0001t0001a0001c0001t0002 | a0001c0001t0001g0020a0001c0001t0001g0021a0001c0001t0002g0019 | 3 | 108 | 0.0278 | -8 | c.103 others(27): Show |
PHACTR1 | ENSG00000112137.19 | transcript | ENST00000332995.12 | protein_coding | 3/14 | INFO_REALIGN_3_PRIME | chr6 | TogoVar | |||||
| PHACTR1_chr6_12711767_13292837 | 12768809 | TACACACA others(1): Show |
T | intron_variant | MODIFIER | HG02486.hp1 HG02717.hp2 HG03486.hp2 |
a0001 | a0001c0001a0001c0002 | a0001c0001t0001a0001c0001t0002a0001c0002t0004 | a0001c0001t0001g0002a0001c0001t0002g0009a0001c0002t0004g0108 | 3 | 108 | 0.0278 | -8 | c.250 others(27): Show |
PHACTR1 | ENSG00000112137.19 | transcript | ENST00000332995.12 | protein_coding | 4/14 | INFO_REALIGN_3_PRIME | chr6 | TogoVar | |||||
| PHACTR1_chr6_12711767_13292837 | 12777625 | CTTTTTTT others(1): Show |
C | intron_variant | MODIFIER | HG00735.hp1 HG00735.hp2 HG01109.hp1 others(42): Show |
a0001 | a0001c0001a0001c0002a0001c0003 | a0001c0001t0001a0001c0001t0002a0001c0001t0003others(6): Show | a0001c0001t0001g0003a0001c0001t0001g0014a0001c0001t0001g0016others(42): Show | 45 | 108 | 0.4167 | -8 | c.250 others(27): Show |
PHACTR1 | ENSG00000112137.19 | transcript | ENST00000332995.12 | protein_coding | 4/14 | INFO_REALIGN_3_PRIME | chr6 | TogoVar | |||||
| PHACTR1_chr6_12711767_13292837 | 12780249 | CTGTGTGT others(1): Show |
C | intron_variant | MODIFIER | HG01109.hp2 HG01167.hp1 HG01168.hp2 others(9): Show |
a0001 | a0001c0001 | a0001c0001t0002a0001c0001t0003 | a0001c0001t0002g0071a0001c0001t0002g0073a0001c0001t0002g0074others(9): Show | 12 | 108 | 0.1111 | -8 | c.250 others(27): Show |
PHACTR1 | ENSG00000112137.19 | transcript | ENST00000332995.12 | protein_coding | 4/14 | INFO_REALIGN_3_PRIME | chr6 | TogoVar | |||||
| PHACTR1_chr6_12711767_13292837 | 12830092 | GGAAAGAA others(1): Show |
G | intron_variant | MODIFIER | HG00735.hp2 HG02055.hp2 HG02300.hp1 others(6): Show |
a0001 | a0001c0001 | a0001c0001t0001a0001c0001t0002a0001c0001t0003others(1): Show | a0001c0001t0001g0046a0001c0001t0001g0070a0001c0001t0001g0083others(6): Show | 9 | 108 | 0.0833 | -8 | c.250 others(27): Show |
PHACTR1 | ENSG00000112137.19 | transcript | ENST00000332995.12 | protein_coding | 4/14 | INFO_REALIGN_3_PRIME | chr6 | TogoVar | |||||
| PHACTR1_chr6_12711767_13292837 | 12921586 | AAGGAAGG others(1): Show |
A | intron_variant | MODIFIER | HG03130.hp1 HG03453.hp2 NA19043.hp2 |
a0001 | a0001c0001 | a0001c0001t0002 | a0001c0001t0002g0033a0001c0001t0002g0034a0001c0001t0002g0035 | 3 | 108 | 0.0278 | -8 | c.251 others(29): Show |
PHACTR1 | ENSG00000112137.19 | transcript | ENST00000332995.12 | protein_coding | 4/14 | INFO_REALIGN_3_PRIME | chr6 | TogoVar | |||||
| PHACTR1_chr6_12711767_13292837 | 12945964 | AAAATAAA others(1): Show |
A | intron_variant | MODIFIER | HG01255.hp1 HG01361.hp2 HG02027.hp1 others(24): Show |
a0001 | a0001c0001a0001c0002a0001c0003 | a0001c0001t0001a0001c0001t0002a0001c0001t0003others(5): Show | a0001c0001t0001g0011a0001c0001t0001g0016a0001c0001t0001g0018others(24): Show | 27 | 108 | 0.2500 | -8 | c.251 others(29): Show |
PHACTR1 | ENSG00000112137.19 | transcript | ENST00000332995.12 | protein_coding | 4/14 | INFO_REALIGN_3_PRIME | chr6 | TogoVar | |||||
| PHACTR1_chr6_12711767_13292837 | 12972629 | CCTTTCTT others(1): Show |
C | intron_variant | MODIFIER | HG02572.hp1 HG02647.hp2 |
a0001 | a0001c0001 | a0001c0001t0001 | a0001c0001t0001g0011a0001c0001t0001g0018 | 2 | 108 | 0.0185 | -8 | c.251 others(27): Show |
PHACTR1 | ENSG00000112137.19 | transcript | ENST00000332995.12 | protein_coding | 4/14 | INFO_REALIGN_3_PRIME | chr6 | TogoVar | |||||
| PHACTR1_chr6_12711767_13292837 | 13059458 | TCACACAC others(1): Show |
T | intron_variant | MODIFIER | HG01255.hp1 HG01496.hp2 HG02572.hp1 others(5): Show |
a0001 | a0001c0001a0001c0002a0001c0003 | a0001c0001t0001a0001c0001t0002a0001c0002t0003others(2): Show | a0001c0001t0001g0011a0001c0001t0001g0016a0001c0001t0001g0018others(5): Show | 8 | 108 | 0.0741 | -8 | c.415 others(25): Show |
PHACTR1 | ENSG00000112137.19 | transcript | ENST00000332995.12 | protein_coding | 5/14 | INFO_REALIGN_3_PRIME | chr6 | TogoVar | |||||
| PHACTR1_chr6_12711767_13292837 | 13064598 | ATATATAT others(1): Show |
A | intron_variant | MODIFIER | HG01192.hp2 HG01993.hp1 HG02027.hp2 others(4): Show |
a0001 | a0001c0001a0001c0002 | a0001c0001t0001a0001c0001t0002a0001c0001t0003others(2): Show | a0001c0001t0001g0017a0001c0001t0002g0007a0001c0001t0002g0056others(4): Show | 7 | 108 | 0.0648 | -8 | c.415 others(27): Show |
PHACTR1 | ENSG00000112137.19 | transcript | ENST00000332995.12 | protein_coding | 5/14 | INFO_REALIGN_3_PRIME | chr6 | TogoVar | |||||
| PHACTR1_chr6_12711767_13292837 | 13064610 | ATATCTAT others(1): Show |
A | intron_variant | MODIFIER | HG00735.hp1 HG01167.hp2 NA18955.hp1 |
a0001 | a0001c0001 | a0001c0001t0002a0001c0001t0003 | a0001c0001t0002g0055a0001c0001t0002g0089a0001c0001t0003g0042 | 3 | 108 | 0.0278 | -8 | c.415 others(27): Show |
PHACTR1 | ENSG00000112137.19 | transcript | ENST00000332995.12 | protein_coding | 5/14 | INFO_REALIGN_3_PRIME | chr6 | TogoVar | |||||
| PHACTR1_chr6_12711767_13292837 | 13179701 | GAGATAGA others(1): Show |
G | intron_variant | MODIFIER | HG00735.hp1 HG01167.hp1 HG01167.hp2 others(26): Show |
a0001 | a0001c0001a0001c0003 | a0001c0001t0001a0001c0001t0002a0001c0001t0003others(3): Show | a0001c0001t0001g0020a0001c0001t0001g0038a0001c0001t0001g0058others(26): Show | 29 | 108 | 0.2685 | -8 | c.497 others(25): Show |
PHACTR1 | ENSG00000112137.19 | transcript | ENST00000332995.12 | protein_coding | 6/14 | INFO_REALIGN_3_PRIME | chr6 | TogoVar | |||||
| PHACTR1_chr6_12711767_13292837 | 13179741 | TAGATAGA others(1): Show |
T | intron_variant | MODIFIER | HG01109.hp1 HG02027.hp2 HG02486.hp1 others(5): Show |
a0001 | a0001c0001a0001c0002 | a0001c0001t0001a0001c0001t0003a0001c0002t0003others(1): Show | a0001c0001t0001g0004a0001c0001t0001g0021a0001c0001t0001g0063others(5): Show | 8 | 108 | 0.0741 | -8 | c.497 others(25): Show |
PHACTR1 | ENSG00000112137.19 | transcript | ENST00000332995.12 | protein_coding | 6/14 | INFO_REALIGN_3_PRIME | chr6 | TogoVar | |||||
| PHACTR1_chr6_12711767_13292837 | 13284517 | CAAAAAAA others(1): Show |
C | intron_variant | MODIFIER | HG01167.hp2 HG01255.hp2 HG01433.hp1 others(8): Show |
a0001 | a0001c0001a0001c0002 | a0001c0001t0002a0001c0001t0008a0001c0002t0002 | a0001c0001t0002g0006a0001c0001t0002g0027a0001c0001t0002g0040others(8): Show | 11 | 108 | 0.1019 | -8 | c.165 others(25): Show |
PHACTR1 | ENSG00000112137.19 | transcript | ENST00000332995.12 | protein_coding | 13/14 | INFO_REALIGN_3_PRIME | chr6 | TogoVar | |||||
| PHACTR1_chr6_12711767_13292837 | 13284537 | AAAAAAAA others(1): Show |
A | intron_variant | MODIFIER | HG01192.hp2 HG01261.hp2 HG01993.hp2 others(3): Show |
a0001 | a0001c0001 | a0001c0001t0002 | a0001c0001t0002g0009a0001c0001t0002g0024a0001c0001t0002g0028others(3): Show | 6 | 108 | 0.0556 | -8 | c.165 others(25): Show |
PHACTR1 | ENSG00000112137.19 | transcript | ENST00000332995.12 | protein_coding | 13/14 | INFO_REALIGN_3_PRIME | chr6 | TogoVar | |||||
| PHACTR1_chr6_12711767_13292837 | 13284543 | AATATATA others(1): Show |
A | intron_variant | MODIFIER | HG01109.hp2 HG01168.hp2 HG01192.hp1 others(2): Show |
a0001 | a0001c0001 | a0001c0001t0003 | a0001c0001t0003g0066a0001c0001t0003g0086a0001c0001t0003g0096others(2): Show | 5 | 108 | 0.0463 | -8 | c.165 others(27): Show |
PHACTR1 | ENSG00000112137.19 | transcript | ENST00000332995.12 | protein_coding | 13/14 | INFO_REALIGN_3_PRIME | chr6 | TogoVar | |||||
| PHACTR2_chr6_143672965_143836185 | 143736554 | ATTTTTTT others(1): Show |
A | intron_variant | MODIFIER | HG00673.hp2 HG00741.hp1 HG01081.hp1 others(15): Show |
a0001a0002 | a0001c0001a0002c0002 | a0001c0001t0001a0001c0001t0003a0001c0001t0006others(13): Show | a0001c0001t0001g0079a0001c0001t0001g0100a0001c0001t0003g0273others(15): Show | 18 | 310 | 0.0581 | -8 | c.215 others(27): Show |
PHACTR2 | ENSG00000112419.15 | transcript | ENST00000440869.7 | protein_coding | 2/12 | INFO_REALIGN_3_PRIME | chr6 | TogoVar | |||||
| PHACTR2_chr6_143672965_143836185 | 143757959 | GCGCGCAC others(1): Show |
G | intron_variant | MODIFIER | HG00738.hp2 HG01168.hp2 HG01243.hp2 others(25): Show |
a0001a0010 | a0001c0001a0001c0003a0010c0014 | a0001c0001t0001a0001c0001t0002a0001c0001t0003others(18): Show | a0001c0001t0001g0029a0001c0001t0002g0028a0001c0001t0003g0096others(25): Show | 28 | 310 | 0.0903 | -8 | c.455 others(25): Show |
PHACTR2 | ENSG00000112419.15 | transcript | ENST00000440869.7 | protein_coding | 4/12 | INFO_REALIGN_3_PRIME | chr6 | TogoVar | |||||
| PHACTR2_chr6_143672965_143836185 | 143771192 | GTGTATAT others(1): Show |
G | intron_variant | MODIFIER | HG00642.hp1 HG00741.hp2 HG01074.hp1 others(35): Show |
a0002a0011 | a0002c0002a0002c0017a0011c0015 | a0002c0002t0001a0002c0002t0002a0002c0002t0003others(24): Show | a0002c0002t0001g0064a0002c0002t0002g0126a0002c0002t0002g0138others(35): Show | 38 | 310 | 0.1226 | -8 | c.123 others(27): Show |
PHACTR2 | ENSG00000112419.15 | transcript | ENST00000440869.7 | protein_coding | 6/12 | INFO_REALIGN_3_PRIME | chr6 | TogoVar | |||||
| PHACTR2_chr6_143672965_143836185 | 143796379 | TTTTCTTT others(1): Show |
T | intron_variant | MODIFIER | HG00140.hp2 HG00438.hp2 HG00558.hp2 others(127): Show |
a0001a0002a0004others(3): Show | a0001c0001a0001c0003a0001c0005others(9): Show | a0001c0001t0001a0001c0001t0002a0001c0001t0003others(91): Show | a0001c0001t0001g0103a0001c0001t0001g0180a0001c0001t0001g0233others(127): Show | 130 | 310 | 0.4194 | -8 | c.184 others(27): Show |
PHACTR2 | ENSG00000112419.15 | transcript | ENST00000440869.7 | protein_coding | 11/12 | INFO_REALIGN_3_PRIME | chr6 | TogoVar | |||||
| PHACTR2_chr6_143672965_143836185 | 143796411 | CTTTCTTT others(1): Show |
C | intron_variant | MODIFIER | HG01123.hp1 HG01167.hp1 HG01169.hp2 others(36): Show |
a0001a0002a0007 | a0001c0001a0001c0003a0002c0002others(1): Show | a0001c0001t0001a0001c0001t0013a0001c0001t0016others(31): Show | a0001c0001t0001g0184a0001c0001t0013g0169a0001c0001t0013g0230others(36): Show | 39 | 310 | 0.1258 | -8 | c.184 others(27): Show |
PHACTR2 | ENSG00000112419.15 | transcript | ENST00000440869.7 | protein_coding | 11/12 | INFO_REALIGN_3_PRIME | chr6 | TogoVar | |||||
| PHACTR2_chr6_143672965_143836185 | 143827155 | AATATATA others(1): Show |
A | 3_prime_UTR_variant | MODIFIER | HG00438.hp1 HG00673.hp2 HG01106.hp2 others(13): Show |
a0001a0002 | a0001c0001a0001c0003a0001c0018others(2): Show | a0001c0001t0007a0001c0001t0027a0001c0001t0084others(7): Show | a0001c0001t0007g0003a0001c0001t0007g0112a0001c0001t0007g0118others(13): Show | 16 | 310 | 0.0516 | -8 | c.*35 others(19): Show |
PHACTR2 | ENSG00000112419.15 | transcript | ENST00000440869.7 | protein_coding | 13/13 | 3503 | INFO_REALIGN_3_PRIME | chr6 | TogoVar | ||||
| PHACTR3_chr20_59599540_59852711 | 59635101 | CTCTTTCT others(1): Show |
C | intron_variant | MODIFIER | HG01496.hp1 HG02735.hp1 HG03654.hp1 |
a0001 | a0001c0001 | a0001c0001t0001 | a0001c0001t0001g0160a0001c0001t0001g0161a0001c0001t0001g0174 | 3 | 250 | 0.0120 | -8 | c.118 others(27): Show |
PHACTR3 | ENSG00000087495.17 | transcript | ENST00000371015.6 | protein_coding | 1/12 | INFO_REALIGN_3_PRIME | chr20 | TogoVar | |||||
| PHACTR3_chr20_59599540_59852711 | 59638805 | GATGGACG others(1): Show |
G | intron_variant | MODIFIER | HG01928.hp2 HG02055.hp1 HG02109.hp2 others(1): Show |
a0001 | a0001c0001 | a0001c0001t0010a0001c0001t0011 | a0001c0001t0010g0020a0001c0001t0010g0064a0001c0001t0011g0021others(1): Show | 4 | 250 | 0.0160 | -8 | c.118 others(27): Show |
PHACTR3 | ENSG00000087495.17 | transcript | ENST00000371015.6 | protein_coding | 1/12 | INFO_REALIGN_3_PRIME | chr20 | TogoVar | |||||
| PHACTR3_chr20_59599540_59852711 | 59639059 | AGATGGAT others(1): Show |
A | intron_variant | MODIFIER | HG01243.hp1 HG01255.hp2 HG02486.hp2 others(3): Show |
a0001 | a0001c0001a0001c0003 | a0001c0001t0001a0001c0001t0002a0001c0001t0006others(1): Show | a0001c0001t0001g0008a0001c0001t0002g0002a0001c0001t0006g0243others(3): Show | 6 | 250 | 0.0240 | -8 | c.118 others(27): Show |
PHACTR3 | ENSG00000087495.17 | transcript | ENST00000371015.6 | protein_coding | 1/12 | INFO_REALIGN_3_PRIME | chr20 | TogoVar | |||||
| PHACTR3_chr20_59599540_59852711 | 59651827 | TGGTAGGT others(1): Show |
T | intron_variant | MODIFIER | HG00280.hp1 HG00558.hp1 HG00597.hp2 others(49): Show |
a0001a0002 | a0001c0001a0002c0002 | a0001c0001t0001a0001c0001t0002a0001c0001t0003others(6): Show | a0001c0001t0001g0012a0001c0001t0001g0014a0001c0001t0001g0019others(49): Show | 52 | 250 | 0.2080 | -8 | c.118 others(27): Show |
PHACTR3 | ENSG00000087495.17 | transcript | ENST00000371015.6 | protein_coding | 1/12 | INFO_REALIGN_3_PRIME | chr20 | TogoVar | |||||
| PHACTR3_chr20_59599540_59852711 | 59674184 | TAACAGGT others(1): Show |
T | intron_variant | MODIFIER | HG01243.hp2 HG01975.hp1 HG02015.hp1 others(4): Show |
a0001 | a0001c0001 | a0001c0001t0001a0001c0001t0003a0001c0001t0016 | a0001c0001t0001g0138a0001c0001t0001g0139a0001c0001t0001g0142others(4): Show | 7 | 250 | 0.0280 | -8 | c.119 others(27): Show |
PHACTR3 | ENSG00000087495.17 | transcript | ENST00000371015.6 | protein_coding | 1/12 | chr20 | TogoVar | ||||||
| PHACTR3_chr20_59599540_59852711 | 59674204 | TCAAGACA others(1): Show |
T | intron_variant | MODIFIER | HG01243.hp2 HG01975.hp1 HG02015.hp1 others(4): Show |
a0001 | a0001c0001 | a0001c0001t0001a0001c0001t0003a0001c0001t0016 | a0001c0001t0001g0138a0001c0001t0001g0139a0001c0001t0001g0142others(4): Show | 7 | 250 | 0.0280 | -8 | c.119 others(27): Show |
PHACTR3 | ENSG00000087495.17 | transcript | ENST00000371015.6 | protein_coding | 1/12 | INFO_REALIGN_3_PRIME | chr20 | TogoVar | |||||
| PHACTR3_chr20_59599540_59852711 | 59716206 | TTGTGTGT others(1): Show |
T | intron_variant | MODIFIER | HG00738.hp2 HG01168.hp2 HG01255.hp2 others(21): Show |
a0001 | a0001c0001a0001c0003 | a0001c0001t0001a0001c0001t0002a0001c0001t0003others(7): Show | a0001c0001t0001g0011a0001c0001t0001g0014a0001c0001t0001g0025others(21): Show | 24 | 250 | 0.0960 | -8 | c.119 others(27): Show |
PHACTR3 | ENSG00000087495.17 | transcript | ENST00000371015.6 | protein_coding | 1/12 | INFO_REALIGN_3_PRIME | chr20 | TogoVar | |||||
| PHACTR3_chr20_59599540_59852711 | 59723060 | CTCTTTCT others(1): Show |
C | intron_variant | MODIFIER | HG00140.hp1 HG00140.hp2 HG00639.hp2 others(34): Show |
a0001 | a0001c0001 | a0001c0001t0001a0001c0001t0002a0001c0001t0003others(8): Show | a0001c0001t0001g0019a0001c0001t0001g0027a0001c0001t0001g0032others(34): Show | 37 | 250 | 0.1480 | -8 | c.119 others(27): Show |
PHACTR3 | ENSG00000087495.17 | transcript | ENST00000371015.6 | protein_coding | 1/12 | INFO_REALIGN_3_PRIME | chr20 | TogoVar | |||||
| PHACTR4_chr1_28364740_28505364 | 28408282 | GGGCGCAG others(1): Show |
G | intron_variant | MODIFIER | HG00280.hp2 HG01123.hp1 HG01167.hp2 others(5): Show |
a0002 | a0002c0002 | a0002c0002t0002a0002c0002t0015a0002c0002t0032 | a0002c0002t0002g0155a0002c0002t0002g0157a0002c0002t0002g0187others(5): Show | 8 | 228 | 0.0351 | -8 | c.16+ others(21): Show |
PHACTR4 | ENSG00000204138.13 | transcript | ENST00000373839.8 | protein_coding | 2/13 | INFO_REALIGN_3_PRIME | chr1 | TogoVar | |||||
| PHACTR4_chr1_28364740_28505364 | 28409951 | ATTTTTTT others(1): Show |
A | intron_variant | MODIFIER | HG00323.hp2 HG01069.hp2 HG01071.hp1 others(22): Show |
a0001a0002 | a0001c0003a0002c0002 | a0001c0003t0004a0001c0003t0006a0001c0003t0010others(6): Show | a0001c0003t0004g0222a0001c0003t0004g0223a0001c0003t0004g0224others(22): Show | 25 | 228 | 0.1097 | -8 | c.16+ others(23): Show |
PHACTR4 | ENSG00000204138.13 | transcript | ENST00000373839.8 | protein_coding | 2/13 | INFO_REALIGN_3_PRIME | chr1 | TogoVar | |||||
| PHACTR4_chr1_28364740_28505364 | 28456916 | CAGATAGA others(1): Show |
C | intron_variant | MODIFIER | HG00280.hp2 HG00639.hp2 HG00733.hp1 others(23): Show |
a0001a0002 | a0001c0001a0002c0002 | a0001c0001t0001a0001c0001t0005a0001c0001t0009others(10): Show | a0001c0001t0001g0006a0001c0001t0001g0008a0001c0001t0001g0015others(23): Show | 26 | 228 | 0.1140 | -8 | c.17- others(23): Show |
PHACTR4 | ENSG00000204138.13 | transcript | ENST00000373839.8 | protein_coding | 2/13 | INFO_REALIGN_3_PRIME | chr1 | TogoVar | |||||
| PHACTR4_chr1_28364740_28505364 | 28458100 | GTGTGTGT others(1): Show |
G | intron_variant | MODIFIER | HG01255.hp1 HG02257.hp1 HG02970.hp2 others(1): Show |
a0001a0002 | a0001c0003a0001c0005a0002c0002 | a0001c0003t0004a0001c0005t0008a0002c0002t0037others(1): Show | a0001c0003t0004g0222a0001c0005t0008g0093a0002c0002t0037g0150others(1): Show | 4 | 228 | 0.0175 | -8 | c.17- others(21): Show |
PHACTR4 | ENSG00000204138.13 | transcript | ENST00000373839.8 | protein_coding | 2/13 | INFO_REALIGN_3_PRIME | chr1 | TogoVar | |||||
| PHACTR4_chr1_28364740_28505364 | 28467379 | TTGTGTGT others(1): Show |
T | intron_variant | MODIFIER | HG01943.hp2 HG02451.hp2 NA19064.hp1 |
a0001a0002 | a0001c0004a0002c0002 | a0001c0004t0001a0002c0002t0002a0002c0002t0003 | a0001c0004t0001g0018a0002c0002t0002g0189a0002c0002t0003g0171 | 3 | 228 | 0.0132 | -8 | c.823 others(23): Show |
PHACTR4 | ENSG00000204138.13 | transcript | ENST00000373839.8 | protein_coding | 6/13 | INFO_REALIGN_3_PRIME | chr1 | TogoVar | |||||
| PHACTR4_chr1_28364740_28505364 | 28503465 | CTTTTTTT others(1): Show |
C | downstream_gene_variant | MODIFIER | HG00140.hp2 HG00323.hp1 HG00741.hp1 others(9): Show |
a0001a0002 | a0001c0003a0002c0002 | a0001c0003t0004a0001c0003t0034a0002c0002t0002 | a0001c0003t0004g0119a0001c0003t0004g0128a0001c0003t0004g0222others(9): Show | 12 | 228 | 0.0526 | -8 | c.*69 others(19): Show |
PHACTR4 | ENSG00000204138.13 | transcript | ENST00000373839.8 | protein_coding | 3102 | chr1 | TogoVar | ||||||
| PHAF1_chr16_67104941_67153544 | 67108660 | CTCTATCT others(1): Show |
C | upstream_gene_variant | MODIFIER | HG02056.hp1 HG02145.hp2 HG02155.hp1 others(18): Show |
a0001a0003 | a0001c0001a0003c0003 | a0001c0001t0001a0001c0001t0002a0001c0001t0003others(1): Show | a0001c0001t0001g0010a0001c0001t0001g0011a0001c0001t0001g0034others(16): Show | 21 | 230 | 0.0913 | -8 | c.-15 others(19): Show |
PHAF1 | ENSG00000125149.12 | transcript | ENST00000219139.8 | protein_coding | 1280 | chr16 | TogoVar | ||||||
| PHAF1_chr16_67104941_67153544 | 67118123 | ATTTTTTT others(1): Show |
A | intron_variant | MODIFIER | HG02109.hp1 HG02258.hp1 HG02280.hp2 others(10): Show |
a0001 | a0001c0001 | a0001c0001t0001 | a0001c0001t0001g0009a0001c0001t0001g0141a0001c0001t0001g0142others(9): Show | 13 | 230 | 0.0565 | -8 | c.65- others(23): Show |
PHAF1 | ENSG00000125149.12 | transcript | ENST00000219139.8 | protein_coding | 1/15 | INFO_REALIGN_3_PRIME | chr16 | TogoVar | |||||
| PHAX_chr5_126595947_126632252 | 126630923 | CTTATTTA others(1): Show |
C | downstream_gene_variant | MODIFIER | HG02027.hp2 HG02074.hp2 HG02083.hp2 others(11): Show |
a0001 | a0001c0001a0001c0006 | a0001c0001t0009a0001c0001t0012a0001c0001t0017others(1): Show | a0001c0001t0009g0128a0001c0001t0009g0131a0001c0001t0009g0132others(11): Show | 14 | 382 | 0.0367 | -8 | c.*60 others(19): Show |
PHAX | ENSG00000164902.14 | transcript | ENST00000297540.5 | protein_coding | 3672 | chr5 | TogoVar | ||||||
| PHB1_chr17_49399052_49419882 | 49405885 | TCCAGGCA others(1): Show |
T | intron_variant | MODIFIER | HG00423.hp1 HG00438.hp2 HG00544.hp2 others(29): Show |
a0001 | a0001c0001a0001c0004 | a0001c0001t0002a0001c0004t0002 | a0001c0001t0002g0004a0001c0001t0002g0021a0001c0001t0002g0038others(6): Show | 32 | 442 | 0.0724 | -8 | c.607 others(23): Show |
PHB1 | ENSG00000167085.14 | transcript | ENST00000300408.8 | protein_coding | 6/6 | chr17 | TogoVar | ||||||
| PHC1_chr12_8909509_8946467 | 8927853 | TTTTCTTT others(1): Show |
T | intron_variant | MODIFIER | HG00639.hp2 HG00642.hp1 HG01074.hp1 others(19): Show |
a0001a0002 | a0001c0002a0001c0004a0001c0007others(1): Show | a0001c0002t0001a0001c0002t0003a0001c0004t0001others(5): Show | a0001c0002t0001g0013a0001c0002t0001g0031a0001c0002t0001g0078others(13): Show | 22 | 368 | 0.0598 | -8 | c.613 others(25): Show |
PHC1 | ENSG00000111752.11 | transcript | ENST00000544916.6 | protein_coding | 6/14 | INFO_REALIGN_3_PRIME | chr12 | TogoVar | |||||
| PHC2_chr1_33318626_33436095 | 33379328 | GCCCCCCA others(1): Show |
G | intron_variant | MODIFIER | HG02129.hp2 NA18939.hp2 NA18943.hp2 others(5): Show |
a0001 | a0001c0003 | a0001c0003t0003a0001c0003t0019 | a0001c0003t0003g0198a0001c0003t0003g0203a0001c0003t0003g0204others(5): Show | 8 | 370 | 0.0216 | -8 | c.-54 others(25): Show |
PHC2 | ENSG00000134686.21 | transcript | ENST00000683057.1 | protein_coding | 1/14 | chr1 | TogoVar | ||||||
| PHC2_chr1_33318626_33436095 | 33395449 | AAAATAAA others(1): Show |
A | intron_variant | MODIFIER | HG00733.hp1 HG01071.hp1 HG01123.hp2 others(30): Show |
a0001 | a0001c0001a0001c0011 | a0001c0001t0005a0001c0001t0012a0001c0001t0017others(1): Show | a0001c0001t0005g0072a0001c0001t0005g0073a0001c0001t0005g0074others(30): Show | 33 | 370 | 0.0892 | -8 | c.-54 others(27): Show |
PHC2 | ENSG00000134686.21 | transcript | ENST00000683057.1 | protein_coding | 1/14 | chr1 | TogoVar | ||||||
| PHC3_chr3_170082584_170186733 | 170111261 | AGAAGGAA others(1): Show |
A | intron_variant | MODIFIER | HG00140.hp2 HG00621.hp1 HG01123.hp1 others(35): Show |
a0001a0006 | a0001c0001a0001c0002a0006c0008 | a0001c0001t0001a0001c0001t0002a0001c0001t0006others(12): Show | a0001c0001t0001g0108a0001c0001t0002g0129a0001c0001t0002g0130others(33): Show | 38 | 332 | 0.1145 | -8 | c.235 others(27): Show |
PHC3 | ENSG00000173889.16 | transcript | ENST00000495893.7 | protein_coding | 11/14 | chr3 | TogoVar | ||||||
| PHC3_chr3_170082584_170186733 | 170111313 | GGAAGGAA others(1): Show |
G | intron_variant | MODIFIER | HG00735.hp2 HG01106.hp1 HG01192.hp2 others(6): Show |
a0001a0002 | a0001c0001a0002c0004 | a0001c0001t0003a0001c0001t0013a0001c0001t0050others(1): Show | a0001c0001t0003g0228a0001c0001t0003g0232a0001c0001t0003g0267others(6): Show | 9 | 332 | 0.0271 | -8 | c.235 others(27): Show |
PHC3 | ENSG00000173889.16 | transcript | ENST00000495893.7 | protein_coding | 11/14 | chr3 | TogoVar | ||||||
| PHC3_chr3_170082584_170186733 | 170135139 | TTTTGTTT others(1): Show |
T | intron_variant | MODIFIER | HG01433.hp1 HG02055.hp1 HG03471.hp1 |
a0003a0010 | a0003c0005a0010c0007 | a0003c0005t0027a0003c0005t0028a0010c0007t0029 | a0003c0005t0027g0324a0003c0005t0028g0325a0010c0007t0029g0323 | 3 | 332 | 0.0090 | -8 | c.919 others(25): Show |
PHC3 | ENSG00000173889.16 | transcript | ENST00000495893.7 | protein_coding | 7/14 | chr3 | TogoVar | ||||||
| PHC3_chr3_170082584_170186733 | 170163461 | AGTGTGTG others(1): Show |
A | intron_variant | MODIFIER | HG01884.hp2 HG02486.hp2 HG03209.hp2 others(1): Show |
a0001 | a0001c0001 | a0001c0001t0001a0001c0001t0004a0001c0001t0016 | a0001c0001t0001g0074a0001c0001t0004g0165a0001c0001t0004g0174others(1): Show | 4 | 332 | 0.0121 | -8 | c.414 others(25): Show |
PHC3 | ENSG00000173889.16 | transcript | ENST00000495893.7 | protein_coding | 4/14 | chr3 | TogoVar |