view | regionname | pos | ref | alt | annotation | impact | samples | ahapids | chapids | thapids | thapids | ac | an | af | len | hgvs_c | hgvs_p | genename | geneid | featuretype | featureid | transcript_biotype | rank | cdna cdna pos length
|
cds cds pos length
|
aa aa pos length
|
distance | status | chr | external |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
RSPO2_chr8_107894316_108088620 | 107952289 | GCACACAC others(1): Show |
G | intron_variant | MODIFIER | HG00323.hp1 HG00323.hp2 HG00423.hp2 others(93): Show |
a0001a0002 | a0001c0004a0002c0002 | a0001c0004t0015a0002c0002t0001a0002c0002t0007others(3): Show | a0001c0004t0015g0005 a0002c0002t0001g0002 a0002c0002t0001g0011 others(93): Show |
96 | 240 | 0.4000 | -8 | c.616 others(25): Show |
RSPO2 | ENSG00000147655.12 | transcript | ENST00000276659.10 | protein_coding | 5/5 | chr8 | TogoVar | |||||||
RSPO2_chr8_107894316_108088620 | 107973532 | TCACACAC others(1): Show |
T | intron_variant | MODIFIER | HG02486.hp2 HG02723.hp1 HG02886.hp2 others(8): Show |
a0001 | a0001c0001 | a0001c0001t0002a0001c0001t0004a0001c0001t0007 | a0001c0001t0002g0059 a0001c0001t0002g0083 a0001c0001t0002g0084 others(8): Show |
11 | 240 | 0.0458 | -8 | c.284 others(27): Show |
RSPO2 | ENSG00000147655.12 | transcript | ENST00000276659.10 | protein_coding | 3/5 | chr8 | TogoVar | |||||||
RSPO2_chr8_107894316_108088620 | 108001023 | AAATAAAA others(1): Show |
A | intron_variant | MODIFIER | HG02451.hp2 HG02647.hp2 HG03225.hp2 |
a0001 | a0001c0001 | a0001c0001t0008 | a0001c0001t0008g0217 a0001c0001t0008g0219 a0001c0001t0008g0220 |
3 | 240 | 0.0125 | -8 | c.95- others(25): Show |
RSPO2 | ENSG00000147655.12 | transcript | ENST00000276659.10 | protein_coding | 2/5 | chr8 | TogoVar | |||||||
RSPO2_chr8_107894316_108088620 | 108003247 | ATGTATGT others(1): Show |
A | intron_variant | MODIFIER | HG00323.hp2 HG00423.hp1 HG00438.hp1 others(72): Show |
a0001a0002 | a0001c0001a0002c0002 | a0001c0001t0001a0001c0001t0002a0001c0001t0003others(8): Show | a0001c0001t0001g0039 a0001c0001t0001g0069 a0001c0001t0002g0022 others(72): Show |
75 | 240 | 0.3125 | -8 | c.95- others(25): Show |
RSPO2 | ENSG00000147655.12 | transcript | ENST00000276659.10 | protein_coding | 2/5 | chr8 | TogoVar | |||||||
RSPO3_chr6_127113671_127204481 | 127117832 | AAGAAGAA others(1): Show |
A | upstream_gene_variant | MODIFIER | HG00408.hp1 HG00438.hp2 HG00558.hp2 others(58): Show |
a0001 | a0001c0001a0001c0002 | a0001c0001t0001a0001c0001t0002a0001c0001t0010others(3): Show | a0001c0001t0001g0060 a0001c0001t0001g0061 a0001c0001t0001g0085 others(51): Show |
61 | 310 | 0.1968 | -8 | c.-13 others(19): Show |
RSPO3 | ENSG00000146374.14 | transcript | ENST00000356698.9 | protein_coding | 838 | chr6 | TogoVar | |||||||
RSPO3_chr6_127113671_127204481 | 127117836 | AGAAGGAA others(1): Show |
A | upstream_gene_variant | MODIFIER | HG02155.hp1 HG02922.hp1 HG02970.hp1 others(1): Show |
a0001 | a0001c0001a0001c0002 | a0001c0001t0001a0001c0001t0006a0001c0002t0001 | a0001c0001t0001g0163 a0001c0001t0006g0164 a0001c0001t0006g0165 others(1): Show |
4 | 310 | 0.0129 | -8 | c.-13 others(19): Show |
RSPO3 | ENSG00000146374.14 | transcript | ENST00000356698.9 | protein_coding | 834 | chr6 | TogoVar | |||||||
RSPO3_chr6_127113671_127204481 | 127117934 | GAGAAAGA others(1): Show |
G | upstream_gene_variant | MODIFIER | HG00408.hp2 HG00438.hp1 HG00639.hp2 others(18): Show |
a0001 | a0001c0001a0001c0002 | a0001c0001t0003a0001c0002t0001a0001c0002t0026 | a0001c0001t0003g0043 a0001c0002t0001g0001 a0001c0002t0001g0003 others(15): Show |
21 | 310 | 0.0677 | -8 | c.-12 others(19): Show |
RSPO3 | ENSG00000146374.14 | transcript | ENST00000356698.9 | protein_coding | 736 | chr6 | TogoVar | |||||||
RSPO3_chr6_127113671_127204481 | 127118002 | AAGAAAGA others(1): Show |
A | upstream_gene_variant | MODIFIER | HG00408.hp1 HG00438.hp2 HG00558.hp2 others(26): Show |
a0001 | a0001c0001a0001c0002a0001c0004 | a0001c0001t0002a0001c0001t0003a0001c0001t0005others(7): Show | a0001c0001t0002g0002 a0001c0001t0002g0009 a0001c0001t0002g0057 others(25): Show |
29 | 310 | 0.0936 | -8 | c.-11 others(19): Show |
RSPO3 | ENSG00000146374.14 | transcript | ENST00000356698.9 | protein_coding | 668 | chr6 | TogoVar | |||||||
RSPO4_chr20_953452_1007311 | 954708 | AAAAAAAA others(1): Show |
A | downstream_gene_variant | MODIFIER | HG00544.hp1 HG00597.hp2 HG00621.hp2 others(51): Show |
a0001 | a0001c0001 | a0001c0001t0001a0001c0001t0002a0001c0001t0003others(7): Show | a0001c0001t0001g0003 a0001c0001t0001g0005 a0001c0001t0001g0019 others(36): Show |
54 | 376 | 0.1436 | -8 | c.*56 others(19): Show |
RSPO4 | ENSG00000101282.9 | transcript | ENST00000217260.9 | protein_coding | 3743 | chr20 | TogoVar | |||||||
RSPO4_chr20_953452_1007311 | 964829 | CACATATA others(1): Show |
C | intron_variant | MODIFIER | HG02258.hp2 HG03579.hp2 NA18906.hp1 |
a0001 | a0001c0001 | a0001c0001t0032a0001c0001t0058a0001c0001t0061 | a0001c0001t0032g0055 a0001c0001t0058g0233 a0001c0001t0061g0300 |
3 | 376 | 0.0080 | -8 | c.410 others(23): Show |
RSPO4 | ENSG00000101282.9 | transcript | ENST00000217260.9 | protein_coding | 3/4 | chr20 | TogoVar | |||||||
RSPO4_chr20_953452_1007311 | 966858 | AAAACAAG others(1): Show |
A | intron_variant | MODIFIER | HG00408.hp2 HG00438.hp2 HG00544.hp2 others(58): Show |
a0001a0003 | a0001c0001a0003c0004 | a0001c0001t0001a0001c0001t0002a0001c0001t0003others(10): Show | a0001c0001t0001g0015 a0001c0001t0001g0020 a0001c0001t0001g0079 others(37): Show |
61 | 376 | 0.1622 | -8 | c.409 others(23): Show |
RSPO4 | ENSG00000101282.9 | transcript | ENST00000217260.9 | protein_coding | 3/4 | chr20 | TogoVar | |||||||
RSPO4_chr20_953452_1007311 | 973459 | ATTGTTTG others(1): Show |
A | intron_variant | MODIFIER | HG01243.hp1 HG01515.hp2 HG01891.hp1 others(53): Show |
a0001a0002a0006 | a0001c0001a0001c0003a0002c0002others(1): Show | a0001c0001t0002a0001c0001t0007a0001c0001t0009others(23): Show | a0001c0001t0002g0030 a0001c0001t0007g0242 a0001c0001t0007g0249 others(44): Show |
56 | 376 | 0.1489 | -8 | c.80- others(23): Show |
RSPO4 | ENSG00000101282.9 | transcript | ENST00000217260.9 | protein_coding | 1/4 | chr20 | TogoVar | |||||||
RSPRY1_chr16_57181329_57245469 | 57202878 | TTATATAT others(1): Show |
T | intron_variant | MODIFIER | HG00140.hp1 HG00280.hp2 HG00323.hp1 others(83): Show |
a0001 | a0001c0001a0001c0003a0001c0004 | a0001c0001t0001a0001c0001t0002a0001c0001t0004others(9): Show | a0001c0001t0001g0003 a0001c0001t0001g0004 a0001c0001t0001g0008 others(83): Show |
86 | 358 | 0.2402 | -8 | c.-15 others(27): Show |
RSPRY1 | ENSG00000159579.14 | transcript | ENST00000394420.9 | protein_coding | 1/14 | INFO_REALIGN_3_PRIME | chr16 | TogoVar | ||||||
RSPRY1_chr16_57181329_57245469 | 57240339 | CCACACAC others(1): Show |
C | 3_prime_UTR_variant | MODIFIER | HG00558.hp1 HG00621.hp1 HG01255.hp1 others(49): Show |
a0001 | a0001c0001 | a0001c0001t0003a0001c0001t0004a0001c0001t0013others(1): Show | a0001c0001t0003g0312 a0001c0001t0003g0313 a0001c0001t0003g0314 others(48): Show |
52 | 358 | 0.1453 | -8 | c.*13 others(19): Show |
RSPRY1 | ENSG00000159579.14 | transcript | ENST00000394420.9 | protein_coding | 15/15 | 1377 | INFO_REALIGN_3_PRIME | chr16 | TogoVar | |||||
RSRC1_chr3_158105089_158550730 | 158106571 | CAGAGAGA others(1): Show |
C | upstream_gene_variant | MODIFIER | HG00323.hp1 HG01516.hp2 HG02055.hp2 others(12): Show |
a0001 | a0001c0001 | a0001c0001t0001a0001c0001t0002a0001c0001t0003others(4): Show | a0001c0001t0001g0167 a0001c0001t0001g0189 a0001c0001t0001g0220 others(12): Show |
15 | 276 | 0.0544 | -8 | c.-36 others(19): Show |
RSRC1 | ENSG00000174891.14 | transcript | ENST00000611884.5 | protein_coding | 3517 | chr3 | TogoVar | |||||||
RSRC1_chr3_158105089_158550730 | 158118456 | TGTGTGTG others(1): Show |
T | intron_variant | MODIFIER | HG01884.hp1 HG02647.hp2 HG02735.hp1 others(9): Show |
a0001 | a0001c0001 | a0001c0001t0001a0001c0001t0002a0001c0001t0009others(2): Show | a0001c0001t0001g0259 a0001c0001t0001g0260 a0001c0001t0002g0257 others(9): Show |
12 | 276 | 0.0435 | -8 | c.-2- others(23): Show |
RSRC1 | ENSG00000174891.14 | transcript | ENST00000611884.5 | protein_coding | 1/9 | INFO_REALIGN_3_PRIME | chr3 | TogoVar | ||||||
RSRC1_chr3_158105089_158550730 | 158334649 | TTGTGTGT others(1): Show |
T | intron_variant | MODIFIER | HG00323.hp1 HG00597.hp2 HG00642.hp2 others(36): Show |
a0001 | a0001c0001 | a0001c0001t0001a0001c0001t0002a0001c0001t0003others(6): Show | a0001c0001t0001g0052 a0001c0001t0001g0254 a0001c0001t0002g0054 others(36): Show |
39 | 276 | 0.1413 | -8 | c.532 others(27): Show |
RSRC1 | ENSG00000174891.14 | transcript | ENST00000611884.5 | protein_coding | 5/9 | INFO_REALIGN_3_PRIME | chr3 | TogoVar | ||||||
RSRC1_chr3_158105089_158550730 | 158470359 | CACATATA others(1): Show |
C | intron_variant | MODIFIER | HG00544.hp1 HG01255.hp1 HG04184.hp2 others(6): Show |
a0001 | a0001c0001 | a0001c0001t0003a0001c0001t0005a0001c0001t0008others(3): Show | a0001c0001t0003g0146 a0001c0001t0003g0151 a0001c0001t0005g0147 others(6): Show |
9 | 276 | 0.0326 | -8 | c.652 others(25): Show |
RSRC1 | ENSG00000174891.14 | transcript | ENST00000611884.5 | protein_coding | 7/9 | INFO_REALIGN_3_PRIME | chr3 | TogoVar | ||||||
RSRC1_chr3_158105089_158550730 | 158477798 | TTATATAT others(1): Show |
T | intron_variant | MODIFIER | HG01978.hp2 HG03139.hp1 HG03209.hp1 others(1): Show |
a0001 | a0001c0001 | a0001c0001t0003a0001c0001t0006a0001c0001t0012 | a0001c0001t0003g0042 a0001c0001t0006g0021 a0001c0001t0006g0036 others(1): Show |
4 | 276 | 0.0145 | -8 | c.652 others(27): Show |
RSRC1 | ENSG00000174891.14 | transcript | ENST00000611884.5 | protein_coding | 7/9 | INFO_REALIGN_3_PRIME | chr3 | TogoVar | ||||||
RSRC2_chr12_122498454_122531936 | 122513196 | AAAATAAA others(1): Show |
A | intron_variant | MODIFIER | HG00280.hp2 HG00323.hp2 HG00597.hp1 others(18): Show |
a0001 | a0001c0001 | a0001c0001t0001a0001c0001t0003a0001c0001t0007others(1): Show | a0001c0001t0001g0045 a0001c0001t0003g0027 a0001c0001t0003g0028 others(10): Show |
21 | 382 | 0.0550 | -8 | c.725 others(25): Show |
RSRC2 | ENSG00000111011.18 | transcript | ENST00000331738.12 | protein_coding | 6/9 | chr12 | TogoVar | |||||||
RSRP1_chr1_25237249_25252454 | 25238774 | CTTTTTTT others(1): Show |
C | downstream_gene_variant | MODIFIER | HG01106.hp2 HG01884.hp2 HG01891.hp2 others(9): Show |
a0001 | a0001c0001a0001c0003 | a0001c0001t0001a0001c0003t0001 | a0001c0001t0001g0001 a0001c0001t0001g0004 a0001c0003t0001g0005 |
12 | 344 | 0.0349 | -8 | c.*38 others(19): Show |
RSRP1 | ENSG00000117616.18 | transcript | ENST00000243189.12 | protein_coding | 3474 | chr1 | TogoVar | |||||||
RSU1_chr10_16585611_16822424 | 16616371 | CAAAAAAA others(1): Show |
C | intron_variant | MODIFIER | HG02280.hp1 HG02451.hp1 HG02723.hp1 others(3): Show |
a0001 | a0001c0001a0001c0002 | a0001c0001t0004a0001c0001t0028a0001c0001t0037others(2): Show | a0001c0001t0004g0022 a0001c0001t0004g0062 a0001c0001t0028g0008 others(3): Show |
6 | 190 | 0.0316 | -8 | c.732 others(27): Show |
RSU1 | ENSG00000148484.18 | transcript | ENST00000345264.10 | protein_coding | 8/8 | chr10 | TogoVar | |||||||
RSU1_chr10_16585611_16822424 | 16646061 | TACACACA others(1): Show |
T | intron_variant | MODIFIER | HG02280.hp1 HG02451.hp1 HG03579.hp2 |
a0001 | a0001c0001 | a0001c0001t0005a0001c0001t0028a0001c0001t0037 | a0001c0001t0005g0162 a0001c0001t0028g0008 a0001c0001t0037g0039 |
3 | 190 | 0.0158 | -8 | c.731 others(27): Show |
RSU1 | ENSG00000148484.18 | transcript | ENST00000345264.10 | protein_coding | 8/8 | chr10 | TogoVar | |||||||
RSU1_chr10_16585611_16822424 | 16646083 | CACACACA others(1): Show |
C | intron_variant | MODIFIER | HG00642.hp2 HG02723.hp2 HG02896.hp1 others(4): Show |
a0001 | a0001c0001a0001c0002 | a0001c0001t0002a0001c0001t0013a0001c0002t0016others(3): Show | a0001c0001t0002g0018 a0001c0001t0002g0019 a0001c0001t0013g0045 others(4): Show |
7 | 190 | 0.0368 | -8 | c.731 others(27): Show |
RSU1 | ENSG00000148484.18 | transcript | ENST00000345264.10 | protein_coding | 8/8 | chr10 | TogoVar | |||||||
RSU1_chr10_16585611_16822424 | 16648776 | TTAAATAA others(1): Show |
T | intron_variant | MODIFIER | HG00099.hp1 HG00099.hp2 HG00140.hp1 others(50): Show |
a0001a0002 | a0001c0001a0001c0002a0001c0003others(1): Show | a0001c0001t0001a0001c0001t0002a0001c0001t0004others(31): Show | a0001c0001t0001g0120 a0001c0001t0001g0138 a0001c0001t0002g0026 others(50): Show |
53 | 190 | 0.2790 | -8 | c.731 others(27): Show |
RSU1 | ENSG00000148484.18 | transcript | ENST00000345264.10 | protein_coding | 8/8 | chr10 | TogoVar | |||||||
RSU1_chr10_16585611_16822424 | 16661287 | CGTGTGTG others(1): Show |
C | intron_variant | MODIFIER | HG00639.hp1 HG00741.hp1 HG01081.hp2 others(1): Show |
a0001 | a0001c0001a0001c0002 | a0001c0001t0039a0001c0002t0022a0001c0002t0025others(1): Show | a0001c0001t0039g0036 a0001c0002t0022g0037 a0001c0002t0025g0106 others(1): Show |
4 | 190 | 0.0211 | -8 | c.731 others(27): Show |
RSU1 | ENSG00000148484.18 | transcript | ENST00000345264.10 | protein_coding | 8/8 | chr10 | TogoVar | |||||||
RSU1_chr10_16585611_16822424 | 16679869 | GTTTTTTT others(1): Show |
G | intron_variant | MODIFIER | HG00140.hp1 HG00140.hp2 HG00544.hp2 others(75): Show |
a0001 | a0001c0001a0001c0002a0001c0003 | a0001c0001t0001a0001c0001t0002a0001c0001t0003others(37): Show | a0001c0001t0001g0085 a0001c0001t0001g0086 a0001c0001t0001g0120 others(75): Show |
78 | 190 | 0.4105 | -8 | c.731 others(27): Show |
RSU1 | ENSG00000148484.18 | transcript | ENST00000345264.10 | protein_coding | 8/8 | chr10 | TogoVar | |||||||
RSU1_chr10_16585611_16822424 | 16746665 | CTTTTTTT others(1): Show |
C | intron_variant | MODIFIER | HG00642.hp2 HG02257.hp2 HG02965.hp2 others(4): Show |
a0001 | a0001c0002 | a0001c0002t0001a0001c0002t0002a0001c0002t0011others(4): Show | a0001c0002t0001g0117 a0001c0002t0002g0072 a0001c0002t0011g0071 others(4): Show |
7 | 190 | 0.0368 | -8 | c.598 others(25): Show |
RSU1 | ENSG00000148484.18 | transcript | ENST00000345264.10 | protein_coding | 7/8 | chr10 | TogoVar | |||||||
RTCA_chr1_100261216_100297769 | 100275391 | AATATATG others(1): Show |
A | intron_variant | MODIFIER | HG02109.hp1 HG02717.hp1 HG03942.hp2 others(11): Show |
a0001 | a0001c0001 | a0001c0001t0004 | a0001c0001t0004g0034 a0001c0001t0004g0158 a0001c0001t0004g0159 others(10): Show |
14 | 296 | 0.0473 | -8 | c.616 others(23): Show |
RTCA | ENSG00000137996.13 | transcript | ENST00000370128.9 | protein_coding | 6/10 | INFO_REALIGN_3_PRIME | chr1 | TogoVar | ||||||
RTCB_chr22_32382582_32417247 | 32384069 | GAACAGGT others(1): Show |
G | downstream_gene_variant | MODIFIER | HG01070.hp2 HG01891.hp1 HG02055.hp1 others(10): Show |
a0001 | a0001c0005a0001c0009 | a0001c0005t0002a0001c0009t0002 | a0001c0005t0002g0018 a0001c0005t0002g0038 a0001c0005t0002g0039 others(5): Show |
13 | 438 | 0.0297 | -8 | c.*39 others(19): Show |
RTCB | ENSG00000100220.12 | transcript | ENST00000216038.6 | protein_coding | 3512 | chr22 | TogoVar | |||||||
RTCB_chr22_32382582_32417247 | 32409535 | AAGAGCTG others(1): Show |
A | intron_variant | MODIFIER | HG01070.hp2 HG01891.hp1 HG02055.hp1 others(10): Show |
a0001 | a0001c0005a0001c0009 | a0001c0005t0002a0001c0009t0002 | a0001c0005t0002g0018 a0001c0005t0002g0038 a0001c0005t0002g0039 others(5): Show |
13 | 438 | 0.0297 | -8 | c.94- others(21): Show |
RTCB | ENSG00000100220.12 | transcript | ENST00000216038.6 | protein_coding | 1/11 | chr22 | TogoVar | |||||||
RTEL1_chr20_63653312_63701245 | 63699983 | CCGGGGTC others(1): Show |
C | downstream_gene_variant | MODIFIER | HG00621.hp2 HG01516.hp2 HG03017.hp2 |
a0002 | a0002c0004a0002c0015 | a0002c0004t0004a0002c0015t0004 | a0002c0004t0004g0002 a0002c0004t0004g0003 a0002c0015t0004g0004 |
3 | 60 | 0.0500 | -8 | c.*41 others(19): Show |
RTEL1 | ENSG00000258366.12 | transcript | ENST00000360203.11 | protein_coding | 3739 | chr20 | TogoVar | |||||||
RTF2_chr20_56463627_56524449 | 56515593 | GAGAGAGA others(1): Show |
G | intron_variant | MODIFIER | HG00642.hp2 HG01243.hp1 HG01261.hp1 others(13): Show |
a0001 | a0001c0001 | a0001c0001t0001a0001c0001t0002 | a0001c0001t0001g0226 a0001c0001t0002g0038 a0001c0001t0002g0177 others(12): Show |
16 | 388 | 0.0412 | -8 | c.592 others(25): Show |
RTF2 | ENSG00000022277.13 | transcript | ENST00000357348.10 | protein_coding | 6/8 | INFO_REALIGN_3_PRIME | chr20 | TogoVar | ||||||
RTF2_chr20_56463627_56524449 | 56515665 | GACACACA others(1): Show |
G | intron_variant | MODIFIER | HG02145.hp1 HG02976.hp2 NA18522.hp2 others(3): Show |
a0001 | a0001c0001 | a0001c0001t0001 | a0001c0001t0001g0008 a0001c0001t0001g0170 a0001c0001t0001g0277 |
6 | 388 | 0.0155 | -8 | c.592 others(25): Show |
RTF2 | ENSG00000022277.13 | transcript | ENST00000357348.10 | protein_coding | 6/8 | INFO_REALIGN_3_PRIME | chr20 | TogoVar | ||||||
RTF2_chr20_56463627_56524449 | 56518372 | TGTCATAA others(1): Show |
T | 3_prime_UTR_variant | MODIFIER | HG00609.hp2 NA18952.hp1 NA18967.hp1 others(2): Show |
a0001 | a0001c0001 | a0001c0001t0003 | a0001c0001t0003g0010 a0001c0001t0003g0065 a0001c0001t0003g0086 |
5 | 388 | 0.0129 | -8 | c.*10 others(17): Show |
RTF2 | ENSG00000022277.13 | transcript | ENST00000357348.10 | protein_coding | 9/9 | 109 | INFO_REALIGN_3_PRIME | chr20 | TogoVar | |||||
RTKN2_chr10_62188086_62273844 | 62195606 | TGAAGGAA others(1): Show |
T | 3_prime_UTR_variant | MODIFIER | HG00738.hp2 HG01192.hp2 HG01243.hp1 others(20): Show |
a0001a0002a0003others(2): Show | a0001c0001a0001c0008a0002c0003others(3): Show | a0001c0001t0022a0001c0001t0023a0001c0001t0025others(10): Show | a0001c0001t0022g0039 a0001c0001t0022g0093 a0001c0001t0023g0024 others(20): Show |
23 | 262 | 0.0878 | -8 | c.*22 others(19): Show |
RTKN2 | ENSG00000182010.11 | transcript | ENST00000373789.8 | protein_coding | 12/12 | 2294 | chr10 | TogoVar | ||||||
RTL1_chr14_100874753_100908722 | 100887934 | CAGCCTGG others(1): Show |
C | intron_variant | MODIFIER | HG00099.hp1 HG00423.hp2 HG00544.hp2 others(62): Show |
a0001a0002a0003others(5): Show | a0001c0001a0001c0004a0002c0002others(7): Show | a0001c0001t0001a0001c0004t0011a0002c0002t0002others(15): Show | a0001c0001t0001g0013 a0001c0001t0001g0074 a0001c0001t0001g0199 others(60): Show |
65 | 430 | 0.1512 | -8 | c.-86 others(25): Show |
RTL1 | ENSG00000254656.3 | transcript | ENST00000649591.1 | protein_coding | 3/3 | chr14 | TogoVar | |||||||
RTL3_chrX_78651068_78664328 | 78658424 | TTGAGGAA others(1): Show |
T | 5_prime_UTR_variant | MODIFIER | HG00597.hp1 | a0001 | a0001c0001 | a0001c0001t0007 | a0001c0001t0007g0017 | 1 | 322 | 0.0031 | -8 | c.-12 others(14): Show |
RTL3 | ENSG00000179300.4 | transcript | ENST00000321110.2 | protein_coding | 2/2 | 5 | chrX | TogoVar | ||||||
RTL4_chrX_112078016_112462514 | 112080391 | TACATACA others(1): Show |
T | upstream_gene_variant | MODIFIER | HG02055.hp1 HG02451.hp1 HG02976.hp1 |
a0001a0002 | a0001c0002a0002c0001 | a0001c0002t0002a0001c0002t0004a0002c0001t0001 | a0001c0002t0002g0027 a0001c0002t0004g0031 a0002c0001t0001g0026 |
3 | 134 | 0.0224 | -8 | c.-32 others(19): Show |
RTL4 | ENSG00000187823.4 | transcript | ENST00000695839.1 | protein_coding | 2624 | chrX | TogoVar | |||||||
RTL4_chrX_112078016_112462514 | 112080395 | TACACACA others(1): Show |
T | upstream_gene_variant | MODIFIER | HG02257.hp1 HG02280.hp1 HG02922.hp1 others(5): Show |
a0001a0002 | a0001c0002a0001c0003a0002c0001 | a0001c0002t0002a0001c0002t0004a0001c0002t0007others(2): Show | a0001c0002t0002g0011 a0001c0002t0002g0017 a0001c0002t0002g0132 others(5): Show |
8 | 134 | 0.0597 | -8 | c.-32 others(19): Show |
RTL4 | ENSG00000187823.4 | transcript | ENST00000695839.1 | protein_coding | 2620 | chrX | TogoVar | |||||||
RTL4_chrX_112078016_112462514 | 112161788 | TCTTCCTT others(1): Show |
T | intron_variant | MODIFIER | HG02071.hp1 HG02135.hp1 HG02257.hp2 others(2): Show |
a0001a0002 | a0001c0002a0002c0001 | a0001c0002t0002a0001c0002t0004a0002c0001t0001 | a0001c0002t0002g0035 a0001c0002t0002g0114 a0001c0002t0004g0030 others(2): Show |
5 | 134 | 0.0373 | -8 | c.-44 others(29): Show |
RTL4 | ENSG00000187823.4 | transcript | ENST00000695839.1 | protein_coding | 2/4 | INFO_REALIGN_3_PRIME | chrX | TogoVar | ||||||
RTL4_chrX_112078016_112462514 | 112169026 | CTCTTTCT others(1): Show |
C | intron_variant | MODIFIER | HG02451.hp2 HG02965.hp1 HG06807.hp2 |
a0001 | a0001c0002a0001c0003 | a0001c0002t0002a0001c0003t0005 | a0001c0002t0002g0011 a0001c0002t0002g0124 a0001c0003t0005g0111 |
3 | 134 | 0.0224 | -8 | c.-44 others(29): Show |
RTL4 | ENSG00000187823.4 | transcript | ENST00000695839.1 | protein_coding | 2/4 | INFO_REALIGN_3_PRIME | chrX | TogoVar | ||||||
RTL4_chrX_112078016_112462514 | 112175169 | AATGGCAA others(1): Show |
A | intron_variant | MODIFIER | HG06807.hp1 | a0001 | a0001c0002 | a0001c0002t0002 | a0001c0002t0002g0025 | 1 | 134 | 0.0075 | -8 | c.-44 others(29): Show |
RTL4 | ENSG00000187823.4 | transcript | ENST00000695839.1 | protein_coding | 2/4 | chrX | TogoVar | |||||||
RTL4_chrX_112078016_112462514 | 112190139 | CCTTTCTT others(1): Show |
C | intron_variant | MODIFIER | HG00642.hp1 HG01106.hp1 HG01261.hp1 others(12): Show |
a0001a0002a0003 | a0001c0002a0002c0001a0003c0004 | a0001c0002t0002a0002c0001t0001a0002c0001t0006others(1): Show | a0001c0002t0002g0072 a0001c0002t0002g0080 a0001c0002t0002g0110 others(12): Show |
15 | 134 | 0.1119 | -8 | c.-44 others(29): Show |
RTL4 | ENSG00000187823.4 | transcript | ENST00000695839.1 | protein_coding | 2/4 | INFO_REALIGN_3_PRIME | chrX | TogoVar | ||||||
RTL4_chrX_112078016_112462514 | 112224305 | CATTTATT others(1): Show |
C | intron_variant | MODIFIER | HG02129.hp1 HG02257.hp2 |
a0001 | a0001c0002 | a0001c0002t0002a0001c0002t0004 | a0001c0002t0002g0040 a0001c0002t0004g0030 |
2 | 134 | 0.0149 | -8 | c.-44 others(29): Show |
RTL4 | ENSG00000187823.4 | transcript | ENST00000695839.1 | protein_coding | 2/4 | INFO_REALIGN_3_PRIME | chrX | TogoVar | ||||||
RTL4_chrX_112078016_112462514 | 112245064 | ACTGTTAG others(1): Show |
A | intron_variant | MODIFIER | HG02280.hp1 | a0001 | a0001c0002 | a0001c0002t0004 | a0001c0002t0004g0015 | 1 | 134 | 0.0075 | -8 | c.-44 others(29): Show |
RTL4 | ENSG00000187823.4 | transcript | ENST00000695839.1 | protein_coding | 2/4 | INFO_REALIGN_3_PRIME | chrX | TogoVar | ||||||
RTL4_chrX_112078016_112462514 | 112272721 | AATTAAGA others(1): Show |
A | intron_variant | MODIFIER | HG01106.hp1 HG02257.hp1 HG02280.hp1 others(9): Show |
a0001a0002a0005 | a0001c0002a0001c0003a0002c0001others(1): Show | a0001c0002t0002a0001c0002t0004a0001c0002t0007others(5): Show | a0001c0002t0002g0035 a0001c0002t0002g0113 a0001c0002t0002g0124 others(9): Show |
12 | 134 | 0.0896 | -8 | c.-44 others(29): Show |
RTL4 | ENSG00000187823.4 | transcript | ENST00000695839.1 | protein_coding | 2/4 | INFO_REALIGN_3_PRIME | chrX | TogoVar | ||||||
RTL4_chrX_112078016_112462514 | 112289773 | ATGTGTGT others(1): Show |
A | intron_variant | MODIFIER | HG02717.hp1 HG03225.hp1 HG03471.hp1 others(1): Show |
a0001 | a0001c0002a0001c0003 | a0001c0002t0002a0001c0002t0018a0001c0003t0002others(1): Show | a0001c0002t0002g0035 a0001c0002t0018g0126 a0001c0003t0002g0012 others(1): Show |
4 | 134 | 0.0299 | -8 | c.-44 others(29): Show |
RTL4 | ENSG00000187823.4 | transcript | ENST00000695839.1 | protein_coding | 2/4 | INFO_REALIGN_3_PRIME | chrX | TogoVar | ||||||
RTL4_chrX_112078016_112462514 | 112291367 | TACACACA others(1): Show |
T | intron_variant | MODIFIER | HG01358.hp1 NA20752.hp1 homoSapiens_chm13v2.hp1 |
a0002a0003 | a0002c0001a0003c0004 | a0002c0001t0001a0003c0004t0016 | a0002c0001t0001g0106 a0002c0001t0001g0107 a0003c0004t0016g0129 |
3 | 134 | 0.0224 | -8 | c.-44 others(29): Show |
RTL4 | ENSG00000187823.4 | transcript | ENST00000695839.1 | protein_coding | 2/4 | INFO_REALIGN_3_PRIME | chrX | TogoVar | ||||||
RTL4_chrX_112078016_112462514 | 112310369 | CATATATA others(1): Show |
C | intron_variant | MODIFIER | HG02922.hp2 HG03098.hp1 HG03209.hp1 |
a0001 | a0001c0002a0001c0003 | a0001c0002t0002a0001c0003t0003 | a0001c0002t0002g0110 a0001c0002t0002g0132 a0001c0003t0003g0120 |
3 | 134 | 0.0224 | -8 | c.-28 others(27): Show |
RTL4 | ENSG00000187823.4 | transcript | ENST00000695839.1 | protein_coding | 3/4 | INFO_REALIGN_3_PRIME | chrX | TogoVar |