view | regionname | pos | ref | alt | annotation | impact | samples | ahapids | chapids | thapids | thapids | ac | an | af | len | hgvs_c | hgvs_p | genename | geneid | featuretype | featureid | transcript_biotype | rank | cdna cdna pos length
|
cds cds pos length
|
aa aa pos length
|
distance | status | chr | external |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
SCD_chr10_100342233_100369826 | 100358220 | CGAACTCC others(1): Show |
C | intron_variant | MODIFIER | NA18971.hp2 NA19004.hp2 NA19091.hp1 |
a0002 | a0002c0002 | a0002c0002t0006 | a0002c0002t0006g0026 | 3 | 420 | 0.0071 | -8 | c.880 others(25): Show |
SCD | ENSG00000099194.6 | transcript | ENST00000370355.3 | protein_coding | 5/5 | INFO_REALIGN_3_PRIME | chr10 | TogoVar | ||||||
SCEL_chr13_77530706_77650263 | 77573638 | CATCTATC others(1): Show |
C | intron_variant | MODIFIER | HG00438.hp2 HG00597.hp1 HG00733.hp1 others(26): Show |
a0001a0002a0003others(1): Show | a0001c0002a0001c0004a0001c0012others(4): Show | a0001c0002t0002a0001c0004t0001a0001c0004t0002others(5): Show | a0001c0002t0002g0028 a0001c0002t0002g0029 a0001c0002t0002g0222 others(26): Show |
29 | 356 | 0.0815 | -8 | c.545 others(25): Show |
SCEL | ENSG00000136155.17 | transcript | ENST00000349847.4 | protein_coding | 9/32 | INFO_REALIGN_3_PRIME | chr13 | TogoVar | ||||||
SCEL_chr13_77530706_77650263 | 77616002 | CTCTGTGT others(1): Show |
C | intron_variant | MODIFIER | HG00741.hp2 HG02257.hp1 NA18981.hp2 |
a0002 | a0002c0001 | a0002c0001t0001 | a0002c0001t0001g0143 a0002c0001t0001g0263 a0002c0001t0001g0266 |
3 | 356 | 0.0084 | -8 | c.145 others(27): Show |
SCEL | ENSG00000136155.17 | transcript | ENST00000349847.4 | protein_coding | 24/32 | INFO_REALIGN_3_PRIME | chr13 | TogoVar | ||||||
SCFD1_chr14_30617319_30740850 | 30691932 | CTTTATTT others(1): Show |
C | intron_variant | MODIFIER | HG02055.hp2 HG02486.hp2 HG02572.hp1 others(6): Show |
a0002 | a0002c0002 | a0002c0002t0001 | a0002c0002t0001g0020 a0002c0002t0001g0201 a0002c0002t0001g0202 others(6): Show |
9 | 328 | 0.0274 | -8 | c.124 others(27): Show |
SCFD1 | ENSG00000092108.22 | transcript | ENST00000458591.7 | protein_coding | 14/24 | INFO_REALIGN_3_PRIME | chr14 | TogoVar | ||||||
SCFD1_chr14_30617319_30740850 | 30703956 | TATATATA others(1): Show |
T | intron_variant | MODIFIER | HG01074.hp1 HG01081.hp1 HG01099.hp2 others(10): Show |
a0001a0003 | a0001c0001a0001c0011a0003c0004others(1): Show | a0001c0001t0001a0001c0011t0001a0003c0004t0002others(1): Show | a0001c0001t0001g0039 a0001c0001t0001g0044 a0001c0001t0001g0045 others(10): Show |
13 | 328 | 0.0396 | -8 | c.149 others(27): Show |
SCFD1 | ENSG00000092108.22 | transcript | ENST00000458591.7 | protein_coding | 17/24 | INFO_REALIGN_3_PRIME | chr14 | TogoVar | ||||||
SCFD1_chr14_30617319_30740850 | 30739086 | ATATGTAT others(1): Show |
A | downstream_gene_variant | MODIFIER | HG01891.hp1 HG02055.hp1 HG02280.hp1 others(4): Show |
a0001a0002 | a0001c0001a0002c0002 | a0001c0001t0001a0002c0002t0001 | a0001c0001t0001g0015 a0001c0001t0001g0016 a0001c0001t0001g0023 others(4): Show |
7 | 328 | 0.0213 | -8 | c.*34 others(19): Show |
SCFD1 | ENSG00000092108.22 | transcript | ENST00000458591.7 | protein_coding | 3237 | chr14 | TogoVar | |||||||
SCFD2_chr4_52867982_53371061 | 52875802 | CTATATAT others(1): Show |
C | intron_variant | MODIFIER | HG00408.hp2 HG00558.hp1 HG01168.hp1 others(17): Show |
a0001a0002a0003 | a0001c0001a0001c0003a0001c0005others(4): Show | a0001c0001t0001a0001c0001t0008a0001c0003t0003others(7): Show | a0001c0001t0001g0012 a0001c0001t0001g0013 a0001c0001t0001g0016 others(17): Show |
20 | 162 | 0.1235 | -8 | c.196 others(27): Show |
SCFD2 | ENSG00000184178.17 | transcript | ENST00000401642.8 | protein_coding | 8/8 | chr4 | TogoVar | |||||||
SCFD2_chr4_52867982_53371061 | 52993396 | CTAAAAAA others(1): Show |
C | intron_variant | MODIFIER | HG00140.hp1 HG00408.hp1 HG00642.hp1 others(39): Show |
a0001a0002a0005 | a0001c0001a0001c0003a0001c0004others(5): Show | a0001c0001t0001a0001c0001t0002a0001c0001t0010others(10): Show | a0001c0001t0001g0008 a0001c0001t0001g0010 a0001c0001t0001g0013 others(39): Show |
42 | 162 | 0.2593 | -8 | c.156 others(29): Show |
SCFD2 | ENSG00000184178.17 | transcript | ENST00000401642.8 | protein_coding | 5/8 | chr4 | TogoVar | |||||||
SCFD2_chr4_52867982_53371061 | 53082971 | GTCTCTCT others(1): Show |
G | intron_variant | MODIFIER | HG00140.hp1 HG00140.hp2 HG00408.hp1 others(138): Show |
a0001a0002a0003others(4): Show | a0001c0001a0001c0003a0001c0004others(11): Show | a0001c0001t0001a0001c0001t0002a0001c0001t0004others(33): Show | a0001c0001t0001g0008 a0001c0001t0001g0010 a0001c0001t0001g0011 others(138): Show |
141 | 162 | 0.8704 | -8 | c.156 others(29): Show |
SCFD2 | ENSG00000184178.17 | transcript | ENST00000401642.8 | protein_coding | 5/8 | chr4 | TogoVar | |||||||
SCFD2_chr4_52867982_53371061 | 53188418 | GGTGTGTG others(1): Show |
G | intron_variant | MODIFIER | HG02109.hp1 HG02280.hp1 HG02818.hp2 others(7): Show |
a0001a0002 | a0001c0001a0001c0003a0002c0006 | a0001c0001t0001a0001c0001t0002a0001c0003t0003others(1): Show | a0001c0001t0001g0018 a0001c0001t0001g0075 a0001c0001t0001g0076 others(7): Show |
10 | 162 | 0.0617 | -8 | c.131 others(29): Show |
SCFD2 | ENSG00000184178.17 | transcript | ENST00000401642.8 | protein_coding | 4/8 | chr4 | TogoVar | |||||||
SCFD2_chr4_52867982_53371061 | 53236808 | TTTTATTT others(1): Show |
T | intron_variant | MODIFIER | HG00408.hp2 HG01192.hp2 HG02155.hp2 others(17): Show |
a0001a0002a0003others(1): Show | a0001c0001a0001c0003a0001c0004others(5): Show | a0001c0001t0001a0001c0001t0002a0001c0001t0008others(9): Show | a0001c0001t0001g0054 a0001c0001t0001g0055 a0001c0001t0001g0076 others(17): Show |
20 | 162 | 0.1235 | -8 | c.131 others(29): Show |
SCFD2 | ENSG00000184178.17 | transcript | ENST00000401642.8 | protein_coding | 4/8 | chr4 | TogoVar | |||||||
SCFD2_chr4_52867982_53371061 | 53258538 | GTATATAT others(1): Show |
G | intron_variant | MODIFIER | HG00558.hp2 HG01192.hp1 HG02602.hp1 others(9): Show |
a0001a0002a0003 | a0001c0001a0001c0003a0001c0004others(2): Show | a0001c0001t0001a0001c0001t0002a0001c0001t0004others(5): Show | a0001c0001t0001g0048 a0001c0001t0001g0052 a0001c0001t0001g0063 others(9): Show |
12 | 162 | 0.0741 | -8 | c.131 others(29): Show |
SCFD2 | ENSG00000184178.17 | transcript | ENST00000401642.8 | protein_coding | 4/8 | chr4 | TogoVar | |||||||
SCG3_chr15_51676503_51726026 | 51704240 | CATACATA others(1): Show |
C | intron_variant | MODIFIER | HG02451.hp1 HG02622.hp1 HG02717.hp2 others(7): Show |
a0001a0005 | a0001c0001a0005c0007 | a0001c0001t0001a0001c0001t0004a0001c0001t0005others(2): Show | a0001c0001t0001g0091 a0001c0001t0004g0086 a0001c0001t0005g0070 others(7): Show |
10 | 402 | 0.0249 | -8 | c.120 others(27): Show |
SCG3 | ENSG00000104112.9 | transcript | ENST00000220478.8 | protein_coding | 10/11 | INFO_REALIGN_3_PRIME | chr15 | TogoVar | ||||||
SCG3_chr15_51676503_51726026 | 51704244 | CATATATA others(1): Show |
C | intron_variant | MODIFIER | HG00408.hp1 NA18940.hp2 NA18941.hp2 others(6): Show |
a0001 | a0001c0001 | a0001c0001t0002a0001c0001t0015 | a0001c0001t0002g0001 a0001c0001t0002g0112 a0001c0001t0002g0133 others(3): Show |
9 | 402 | 0.0224 | -8 | c.120 others(27): Show |
SCG3 | ENSG00000104112.9 | transcript | ENST00000220478.8 | protein_coding | 10/11 | INFO_REALIGN_3_PRIME | chr15 | TogoVar | ||||||
SCG3_chr15_51676503_51726026 | 51704764 | CATATATA others(1): Show |
C | intron_variant | MODIFIER | HG00423.hp1 HG01243.hp1 HG01257.hp2 others(9): Show |
a0001a0003 | a0001c0001a0001c0002a0003c0004 | a0001c0001t0003a0001c0001t0006a0001c0001t0016others(2): Show | a0001c0001t0003g0052 a0001c0001t0006g0223 a0001c0001t0016g0088 others(9): Show |
12 | 402 | 0.0299 | -8 | c.120 others(27): Show |
SCG3 | ENSG00000104112.9 | transcript | ENST00000220478.8 | protein_coding | 10/11 | INFO_REALIGN_3_PRIME | chr15 | TogoVar | ||||||
SCG3_chr15_51676503_51726026 | 51709662 | CATATATA others(1): Show |
C | intron_variant | MODIFIER | HG00639.hp2 HG01081.hp2 HG01515.hp2 others(6): Show |
a0001a0003a0004 | a0001c0001a0003c0004a0004c0008 | a0001c0001t0001a0001c0001t0003a0003c0004t0001others(1): Show | a0001c0001t0001g0037 a0001c0001t0003g0039 a0001c0001t0003g0040 others(6): Show |
9 | 402 | 0.0224 | -8 | c.120 others(27): Show |
SCG3 | ENSG00000104112.9 | transcript | ENST00000220478.8 | protein_coding | 10/11 | INFO_REALIGN_3_PRIME | chr15 | TogoVar | ||||||
SCG3_chr15_51676503_51726026 | 51709701 | ATTTTTTT others(1): Show |
A | intron_variant | MODIFIER | HG02735.hp1 HG02922.hp1 NA18967.hp1 others(4): Show |
a0001a0002 | a0001c0001a0001c0002a0001c0005others(1): Show | a0001c0001t0002a0001c0002t0004a0001c0005t0005others(1): Show | a0001c0001t0002g0006 a0001c0001t0002g0142 a0001c0001t0002g0175 others(3): Show |
7 | 402 | 0.0174 | -8 | c.120 others(27): Show |
SCG3 | ENSG00000104112.9 | transcript | ENST00000220478.8 | protein_coding | 10/11 | INFO_REALIGN_3_PRIME | chr15 | TogoVar | ||||||
SCG3_chr15_51676503_51726026 | 51718199 | TAGACAGA others(1): Show |
T | intron_variant | MODIFIER | HG00099.hp1 HG00099.hp2 HG00323.hp2 others(116): Show |
a0001a0002a0003others(1): Show | a0001c0001a0001c0002a0001c0010others(4): Show | a0001c0001t0001a0001c0001t0002a0001c0001t0014others(7): Show | a0001c0001t0001g0007 a0001c0001t0001g0024 a0001c0001t0001g0025 others(115): Show |
119 | 402 | 0.2960 | -8 | c.128 others(27): Show |
SCG3 | ENSG00000104112.9 | transcript | ENST00000220478.8 | protein_coding | 11/11 | INFO_REALIGN_3_PRIME | chr15 | TogoVar | ||||||
SCG3_chr15_51676503_51726026 | 51718890 | TAAGTCAG others(1): Show |
T | intron_variant | MODIFIER | HG02451.hp1 HG02622.hp1 HG02717.hp2 others(4): Show |
a0001a0005 | a0001c0001a0005c0007 | a0001c0001t0007a0005c0007t0007 | a0001c0001t0007g0063 a0001c0001t0007g0064 a0001c0001t0007g0065 others(4): Show |
7 | 402 | 0.0174 | -8 | c.128 others(25): Show |
SCG3 | ENSG00000104112.9 | transcript | ENST00000220478.8 | protein_coding | 11/11 | INFO_REALIGN_3_PRIME | chr15 | TogoVar | ||||||
SCG5_chr15_32636710_32702092 | 32663032 | AATATATA others(1): Show |
A | intron_variant | MODIFIER | HG01884.hp2 NA19030.hp1 NA19087.hp2 |
a0001 | a0001c0001 | a0001c0001t0001a0001c0001t0003a0001c0001t0008 | a0001c0001t0001g0278 a0001c0001t0003g0175 a0001c0001t0008g0188 |
3 | 415 | 0.0072 | -8 | c.227 others(27): Show |
SCG5 | ENSG00000166922.9 | transcript | ENST00000300175.9 | protein_coding | 2/5 | INFO_REALIGN_3_PRIME | chr15 | TogoVar | ||||||
SCGB1D2_chr11_62237239_62249812 | 62237578 | ACGTGTAT others(1): Show |
A | upstream_gene_variant | MODIFIER | HG00140.hp1 HG00544.hp1 HG00544.hp2 others(49): Show |
a0002 | a0002c0002 | a0002c0002t0001 | a0002c0002t0001g0002 a0002c0002t0001g0007 a0002c0002t0001g0023 |
52 | 436 | 0.1193 | -8 | c.-47 others(19): Show |
SCGB1D2 | ENSG00000124935.4 | transcript | ENST00000244926.4 | protein_coding | 4660 | chr11 | TogoVar | |||||||
SCGB2A1_chr11_62203673_62218943 | 62206840 | AAAATAAA others(1): Show |
A | upstream_gene_variant | MODIFIER | HG00099.hp2 HG00639.hp2 HG00673.hp1 others(37): Show |
a0001 | a0001c0001 | a0001c0001t0001 | a0001c0001t0001g0003 a0001c0001t0001g0016 a0001c0001t0001g0021 others(17): Show |
40 | 442 | 0.0905 | -8 | c.-18 others(19): Show |
SCGB2A1 | ENSG00000124939.6 | transcript | ENST00000244930.6 | protein_coding | 1832 | chr11 | TogoVar | |||||||
SCGB2A1_chr11_62203673_62218943 | 62209635 | ATGTGTGT others(1): Show |
A | intron_variant | MODIFIER | HG02056.hp2 HG02132.hp1 HG02818.hp1 others(4): Show |
a0001 | a0001c0001 | a0001c0001t0001 | a0001c0001t0001g0034 a0001c0001t0001g0084 a0001c0001t0001g0206 others(3): Show |
7 | 442 | 0.0158 | -8 | c.56- others(21): Show |
SCGB2A1 | ENSG00000124939.6 | transcript | ENST00000244930.6 | protein_coding | 1/2 | INFO_REALIGN_3_PRIME | chr11 | TogoVar | ||||||
SCGB2A1_chr11_62203673_62218943 | 62213061 | CACATATA others(1): Show |
C | intron_variant | MODIFIER | HG00099.hp2 HG00639.hp2 HG00673.hp1 others(31): Show |
a0001 | a0001c0001 | a0001c0001t0001 | a0001c0001t0001g0003 a0001c0001t0001g0016 a0001c0001t0001g0021 others(11): Show |
34 | 442 | 0.0769 | -8 | c.244 others(23): Show |
SCGB2A1 | ENSG00000124939.6 | transcript | ENST00000244930.6 | protein_coding | 2/2 | INFO_REALIGN_3_PRIME | chr11 | TogoVar | ||||||
SCGB2B2_chr19_34585644_34682159 | 34590389 | CCATCCAT others(1): Show |
C | downstream_gene_variant | MODIFIER | HG00099.hp1 HG00099.hp2 HG00140.hp2 others(138): Show |
a0001 | a0001c0001 | a0001c0001t0001a0001c0001t0002a0001c0001t0006others(33): Show | a0001c0001t0001g0001 a0001c0001t0001g0003 a0001c0001t0001g0004 others(135): Show |
141 | 370 | 0.3811 | -8 | c.*31 others(19): Show |
SCGB2B2 | ENSG00000205209.8 | transcript | ENST00000601241.6 | protein_coding | 254 | chr19 | TogoVar | |||||||
SCGB2B2_chr19_34585644_34682159 | 34594652 | CGTGTGTG others(1): Show |
C | 5_prime_UTR_variant | MODIFIER | HG00639.hp2 HG01081.hp2 HG01192.hp2 others(10): Show |
a0001 | a0001c0001 | a0001c0001t0010a0001c0001t0037a0001c0001t0039others(3): Show | a0001c0001t0010g0017 a0001c0001t0010g0031 a0001c0001t0010g0043 others(10): Show |
13 | 370 | 0.0351 | -8 | c.-97 others(15): Show |
SCGB2B2 | ENSG00000205209.8 | transcript | ENST00000601241.6 | protein_coding | 2/4 | 90 | chr19 | TogoVar | ||||||
SCGB2B2_chr19_34585644_34682159 | 34600918 | GGTGTGTG others(1): Show |
G | intron_variant | MODIFIER | HG01109.hp1 HG01123.hp2 HG01891.hp1 others(15): Show |
a0001 | a0001c0001 | a0001c0001t0003a0001c0001t0023a0001c0001t0040others(9): Show | a0001c0001t0003g0273 a0001c0001t0023g0009 a0001c0001t0023g0320 others(13): Show |
18 | 370 | 0.0487 | -8 | c.-20 others(29): Show |
SCGB2B2 | ENSG00000205209.8 | transcript | ENST00000601241.6 | protein_coding | 1/3 | chr19 | TogoVar | |||||||
SCGB2B2_chr19_34585644_34682159 | 34612022 | CTTTTTTT others(1): Show |
C | intron_variant | MODIFIER | HG00099.hp1 HG00423.hp2 HG00438.hp2 others(65): Show |
a0001 | a0001c0001 | a0001c0001t0001a0001c0001t0003a0001c0001t0005others(25): Show | a0001c0001t0001g0001 a0001c0001t0001g0003 a0001c0001t0001g0004 others(61): Show |
68 | 370 | 0.1838 | -8 | c.-20 others(31): Show |
SCGB2B2 | ENSG00000205209.8 | transcript | ENST00000601241.6 | protein_coding | 1/3 | chr19 | TogoVar | |||||||
SCGB2B2_chr19_34585644_34682159 | 34641648 | ATCACCTT others(1): Show |
A | intron_variant | MODIFIER | HG00140.hp2 HG00544.hp1 HG00558.hp2 others(145): Show |
a0001a0002a0003others(2): Show | a0001c0001a0002c0002a0003c0005others(2): Show | a0001c0001t0006a0001c0001t0007a0001c0001t0008others(56): Show | a0001c0001t0006g0094 a0001c0001t0006g0107 a0001c0001t0006g0141 others(143): Show |
148 | 370 | 0.4000 | -8 | c.-20 others(31): Show |
SCGB2B2 | ENSG00000205209.8 | transcript | ENST00000601241.6 | protein_coding | 1/3 | chr19 | TogoVar | |||||||
SCGB2B2_chr19_34585644_34682159 | 34658807 | CAACAACA others(1): Show |
C | intron_variant | MODIFIER | HG02055.hp1 HG02818.hp1 HG02970.hp1 others(3): Show |
a0001 | a0001c0001 | a0001c0001t0017a0001c0001t0095a0001c0001t0096others(2): Show | a0001c0001t0017g0204 a0001c0001t0017g0206 a0001c0001t0095g0207 others(3): Show |
6 | 370 | 0.0162 | -8 | c.-20 others(31): Show |
SCGB2B2 | ENSG00000205209.8 | transcript | ENST00000601241.6 | protein_coding | 1/3 | chr19 | TogoVar | |||||||
SCGN_chr6_25647215_25706783 | 25658003 | CTTTTTTT others(1): Show |
C | intron_variant | MODIFIER | HG02630.hp1 HG02717.hp1 NA18943.hp2 others(4): Show |
a0001 | a0001c0001 | a0001c0001t0001a0001c0001t0002 | a0001c0001t0001g0014 a0001c0001t0001g0156 a0001c0001t0001g0239 others(3): Show |
7 | 368 | 0.0190 | -8 | c.154 others(25): Show |
SCGN | ENSG00000079689.15 | transcript | ENST00000377961.3 | protein_coding | 2/10 | INFO_REALIGN_3_PRIME | chr6 | TogoVar | ||||||
SCHIP1_chr3_159268244_159902359 | 159297126 | TTGTGTGT others(1): Show |
T | intron_variant | MODIFIER | HG01167.hp2 HG01169.hp2 HG01891.hp2 others(15): Show |
a0001a0002 | a0001c0001a0001c0002a0002c0003 | a0001c0001t0001a0001c0002t0001a0002c0003t0001 | a0001c0001t0001g0003 a0001c0001t0001g0019 a0001c0001t0001g0020 others(15): Show |
18 | 100 | 0.1800 | -8 | c.63+ others(25): Show |
SCHIP1 | ENSG00000283154.3 | transcript | ENST00000638749.2 | protein_coding | 1/7 | INFO_REALIGN_3_PRIME | chr3 | TogoVar | ||||||
SCHIP1_chr3_159268244_159902359 | 159316120 | TTTCTTTG others(1): Show |
T | intron_variant | MODIFIER | HG01884.hp2 HG03139.hp2 NA19030.hp1 others(1): Show |
a0001 | a0001c0001a0001c0002 | a0001c0001t0001a0001c0002t0001 | a0001c0001t0001g0071 a0001c0001t0001g0077 a0001c0001t0001g0078 others(1): Show |
4 | 100 | 0.0400 | -8 | c.63+ others(25): Show |
SCHIP1 | ENSG00000283154.3 | transcript | ENST00000638749.2 | protein_coding | 1/7 | INFO_REALIGN_3_PRIME | chr3 | TogoVar | ||||||
SCHIP1_chr3_159268244_159902359 | 159345546 | GTCTCTCT others(1): Show |
G | intron_variant | MODIFIER | HG03139.hp1 HG03471.hp1 |
a0001 | a0001c0001a0001c0002 | a0001c0001t0001a0001c0002t0001 | a0001c0001t0001g0055 a0001c0002t0001g0054 |
2 | 100 | 0.0200 | -8 | c.63+ others(25): Show |
SCHIP1 | ENSG00000283154.3 | transcript | ENST00000638749.2 | protein_coding | 1/7 | INFO_REALIGN_3_PRIME | chr3 | TogoVar | ||||||
SCHIP1_chr3_159268244_159902359 | 159432286 | ATGTGTGT others(1): Show |
A | intron_variant | MODIFIER | HG01106.hp2 HG01255.hp2 HG01433.hp2 others(5): Show |
a0001 | a0001c0001a0001c0002 | a0001c0001t0001a0001c0002t0001 | a0001c0001t0001g0008 a0001c0001t0001g0077 a0001c0001t0001g0088 others(5): Show |
8 | 100 | 0.0800 | -8 | c.63+ others(27): Show |
SCHIP1 | ENSG00000283154.3 | transcript | ENST00000638749.2 | protein_coding | 1/7 | INFO_REALIGN_3_PRIME | chr3 | TogoVar | ||||||
SCHIP1_chr3_159268244_159902359 | 159468748 | TATAATAT others(1): Show |
T | intron_variant | MODIFIER | HG01106.hp2 NA19058.hp1 |
a0001 | a0001c0001 | a0001c0001t0001 | a0001c0001t0001g0007 a0001c0001t0001g0099 |
2 | 100 | 0.0200 | -8 | c.63+ others(27): Show |
SCHIP1 | ENSG00000283154.3 | transcript | ENST00000638749.2 | protein_coding | 1/7 | INFO_REALIGN_3_PRIME | chr3 | TogoVar | ||||||
SCHIP1_chr3_159268244_159902359 | 159553967 | CGTGTGTG others(1): Show |
C | intron_variant | MODIFIER | HG01167.hp1 HG01169.hp1 HG01891.hp1 others(11): Show |
a0001a0002 | a0001c0001a0001c0002a0002c0003 | a0001c0001t0001a0001c0002t0001a0002c0003t0001 | a0001c0001t0001g0001 a0001c0001t0001g0004 a0001c0001t0001g0008 others(11): Show |
14 | 100 | 0.1400 | -8 | c.64- others(27): Show |
SCHIP1 | ENSG00000283154.3 | transcript | ENST00000638749.2 | protein_coding | 1/7 | INFO_REALIGN_3_PRIME | chr3 | TogoVar | ||||||
SCHIP1_chr3_159268244_159902359 | 159626089 | TATAGATA others(1): Show |
T | intron_variant | MODIFIER | HG01106.hp1 HG02735.hp2 NA18747.hp2 |
a0001 | a0001c0001a0001c0002 | a0001c0001t0001a0001c0002t0001 | a0001c0001t0001g0064 a0001c0001t0001g0067 a0001c0002t0001g0092 |
3 | 100 | 0.0300 | -8 | c.64- others(27): Show |
SCHIP1 | ENSG00000283154.3 | transcript | ENST00000638749.2 | protein_coding | 1/7 | INFO_REALIGN_3_PRIME | chr3 | TogoVar | ||||||
SCHIP1_chr3_159268244_159902359 | 159626133 | GATAGATA others(1): Show |
G | intron_variant | MODIFIER | HG01433.hp1 HG01891.hp2 HG02572.hp1 others(1): Show |
a0001 | a0001c0002 | a0001c0002t0001 | a0001c0002t0001g0032 a0001c0002t0001g0033 a0001c0002t0001g0057 others(1): Show |
4 | 100 | 0.0400 | -8 | c.64- others(27): Show |
SCHIP1 | ENSG00000283154.3 | transcript | ENST00000638749.2 | protein_coding | 1/7 | INFO_REALIGN_3_PRIME | chr3 | TogoVar | ||||||
SCHIP1_chr3_159268244_159902359 | 159626179 | TCTAGATA others(1): Show |
T | intron_variant | MODIFIER | HG02451.hp2 HG02486.hp1 HG02717.hp2 others(3): Show |
a0001 | a0001c0001a0001c0002 | a0001c0001t0001a0001c0002t0001 | a0001c0001t0001g0050 a0001c0002t0001g0039 a0001c0002t0001g0051 others(3): Show |
6 | 100 | 0.0600 | -8 | c.64- others(27): Show |
SCHIP1 | ENSG00000283154.3 | transcript | ENST00000638749.2 | protein_coding | 1/7 | chr3 | TogoVar | |||||||
SCHIP1_chr3_159268244_159902359 | 159626247 | TCTATATA others(1): Show |
T | intron_variant | MODIFIER | HG01169.hp1 HG01433.hp1 HG01891.hp2 others(5): Show |
a0001 | a0001c0001a0001c0002 | a0001c0001t0001a0001c0002t0001 | a0001c0001t0001g0016 a0001c0001t0001g0037 a0001c0001t0001g0093 others(5): Show |
8 | 100 | 0.0800 | -8 | c.64- others(27): Show |
SCHIP1 | ENSG00000283154.3 | transcript | ENST00000638749.2 | protein_coding | 1/7 | chr3 | TogoVar | |||||||
SCHIP1_chr3_159268244_159902359 | 159626248 | CTATATAG others(1): Show |
C | intron_variant | MODIFIER | HG01243.hp2 HG02451.hp1 HG03540.hp2 |
a0001 | a0001c0001a0001c0002 | a0001c0001t0001a0001c0002t0001 | a0001c0001t0001g0073 a0001c0001t0001g0075 a0001c0002t0001g0017 |
3 | 100 | 0.0300 | -8 | c.64- others(27): Show |
SCHIP1 | ENSG00000283154.3 | transcript | ENST00000638749.2 | protein_coding | 1/7 | INFO_REALIGN_3_PRIME | chr3 | TogoVar | ||||||
SCHIP1_chr3_159268244_159902359 | 159626251 | TATAGATA others(1): Show |
T | intron_variant | MODIFIER | HG02698.hp2 HG02922.hp2 HG03225.hp2 |
a0001a0002 | a0001c0001a0001c0002a0002c0003 | a0001c0001t0001a0001c0002t0001a0002c0003t0001 | a0001c0001t0001g0002 a0001c0002t0001g0061 a0002c0003t0001g0034 |
3 | 100 | 0.0300 | -8 | c.64- others(27): Show |
SCHIP1 | ENSG00000283154.3 | transcript | ENST00000638749.2 | protein_coding | 1/7 | INFO_REALIGN_3_PRIME | chr3 | TogoVar | ||||||
SCHIP1_chr3_159268244_159902359 | 159637371 | CCACACAC others(1): Show |
C | intron_variant | MODIFIER | HG01884.hp1 HG02622.hp1 HG02723.hp1 others(5): Show |
a0001 | a0001c0001a0001c0002 | a0001c0001t0001a0001c0002t0002 | a0001c0001t0001g0031 a0001c0001t0001g0038 a0001c0001t0001g0041 others(5): Show |
8 | 100 | 0.0800 | -8 | c.64- others(27): Show |
SCHIP1 | ENSG00000283154.3 | transcript | ENST00000638749.2 | protein_coding | 1/7 | INFO_REALIGN_3_PRIME | chr3 | TogoVar | ||||||
SCHIP1_chr3_159268244_159902359 | 159694537 | CAAGAAAG others(1): Show |
C | intron_variant | MODIFIER | HG01167.hp1 HG01255.hp1 HG01255.hp2 others(9): Show |
a0001 | a0001c0001a0001c0002 | a0001c0001t0001a0001c0002t0001 | a0001c0001t0001g0006 a0001c0001t0001g0007 a0001c0001t0001g0023 others(9): Show |
12 | 100 | 0.1200 | -8 | c.64- others(25): Show |
SCHIP1 | ENSG00000283154.3 | transcript | ENST00000638749.2 | protein_coding | 1/7 | INFO_REALIGN_3_PRIME | chr3 | TogoVar | ||||||
SCHIP1_chr3_159268244_159902359 | 159704864 | TTTTCTTT others(1): Show |
T | intron_variant | MODIFIER | HG00642.hp1 HG01106.hp1 HG01256.hp1 others(6): Show |
a0001a0003 | a0001c0001a0001c0002a0003c0005 | a0001c0001t0001a0001c0002t0001a0003c0005t0001 | a0001c0001t0001g0001 a0001c0001t0001g0005 a0001c0001t0001g0011 others(6): Show |
9 | 100 | 0.0900 | -8 | c.64- others(25): Show |
SCHIP1 | ENSG00000283154.3 | transcript | ENST00000638749.2 | protein_coding | 1/7 | INFO_REALIGN_3_PRIME | chr3 | TogoVar | ||||||
SCHIP1_chr3_159268244_159902359 | 159712826 | GAGAAAGA others(1): Show |
G | intron_variant | MODIFIER | HG01255.hp2 HG01891.hp1 HG03654.hp1 |
a0001 | a0001c0001 | a0001c0001t0001 | a0001c0001t0001g0015 a0001c0001t0001g0068 a0001c0001t0001g0100 |
3 | 100 | 0.0300 | -8 | c.64- others(25): Show |
SCHIP1 | ENSG00000283154.3 | transcript | ENST00000638749.2 | protein_coding | 1/7 | INFO_REALIGN_3_PRIME | chr3 | TogoVar | ||||||
SCHIP1_chr3_159268244_159902359 | 159713233 | GAAGAAAG others(1): Show |
G | intron_variant | MODIFIER | HG01891.hp1 HG02145.hp2 HG02698.hp1 others(9): Show |
a0001 | a0001c0001a0001c0002 | a0001c0001t0001a0001c0002t0001 | a0001c0001t0001g0009 a0001c0001t0001g0011 a0001c0001t0001g0014 others(9): Show |
12 | 100 | 0.1200 | -8 | c.64- others(25): Show |
SCHIP1 | ENSG00000283154.3 | transcript | ENST00000638749.2 | protein_coding | 1/7 | INFO_REALIGN_3_PRIME | chr3 | TogoVar | ||||||
SCHIP1_chr3_159268244_159902359 | 159864470 | TACACACA others(1): Show |
T | intron_variant | MODIFIER | HG02451.hp2 HG02572.hp2 HG02622.hp1 others(5): Show |
a0001 | a0001c0001a0001c0002 | a0001c0001t0001a0001c0002t0001 | a0001c0001t0001g0025 a0001c0001t0001g0031 a0001c0001t0001g0035 others(5): Show |
8 | 100 | 0.0800 | -8 | c.760 others(25): Show |
SCHIP1 | ENSG00000283154.3 | transcript | ENST00000638749.2 | protein_coding | 2/7 | INFO_REALIGN_3_PRIME | chr3 | TogoVar | ||||||
SCHIP1_chr3_159268244_159902359 | 159878793 | TAAAATAA others(1): Show |
T | intron_variant | MODIFIER | HG00438.hp1 HG02735.hp2 |
a0001 | a0001c0001a0001c0002 | a0001c0001t0001a0001c0002t0001 | a0001c0001t0001g0013 a0001c0002t0001g0092 |
2 | 100 | 0.0200 | -8 | c.879 others(25): Show |
SCHIP1 | ENSG00000283154.3 | transcript | ENST00000638749.2 | protein_coding | 3/7 | INFO_REALIGN_3_PRIME | chr3 | TogoVar |