Joint Open Genome and Omics Platform (JoGo)

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Snpeff annotation impact detail

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regionname	pos	ref	alt	annotation	impact	samples	ahapids	chapids	thapids	thapids	ac	an	af	len	hgvs_c	hgvs_p	genename	geneid	featuretype	featureid	transcript_biotype	rank	cdna cdna pos length	cds cds pos length	aa aa pos length	distance	status	chr	external
SGK3_chr8_66707781_66867022	66711089	CTGTGTGT others(1): Show CTGTGTGTG	C C	upstream_gene_variant upstream_gene_variant	MODIFIER	HG01175.hp1 HG02523.hp1 HG02647.hp1 others(4): Show HG01175.hp1 HG02523.hp1 HG02647.hp1 HG02683.hp2 HG03579.hp1 NA18522.hp1 NA19030.hp1	a0001 a0001	a0001c0001 a0001c0002 a0001c0001 a0001c0002	a0001c0001t0001 a0001c0001t0010 a0001c0002t0002 others(1): Show a0001c0001t0001 a0001c0001t0010 a0001c0002t0002 a0001c0002t0012	a0001c0001t0001g0008 a0001c0001t0001g0011 a0001c0001t0001g0081 others(4): Show a0001c0001t0001g0008 a0001c0001t0001g0011 a0001c0001t0001g0081 a0001c0001t0001g0122 a0001c0001t0010g0068 a0001c0002t0002g0058 a0001c0002t0012g0028	7	142	0.0493	-8	c.-18 others(19): Show c.-1865_-1858delTGTGTGTG		SGK3	ENSG00000104205.16	transcript	ENST00000521198.7	protein_coding					1691		chr8	TogoVar
SGK3_chr8_66707781_66867022	66779561	AATATATA others(1): Show AATATATAT	A A	intron_variant intron_variant	MODIFIER	HG02109.hp2 HG02559.hp2 HG02109.hp2 HG02559.hp2	a0001 a0001	a0001c0002 a0001c0002	a0001c0002t0002 a0001c0002t0002	a0001c0002t0002g0005 a0001c0002t0002g0063 a0001c0002t0002g0005 a0001c0002t0002g0063	2	142	0.0141	-8	c.-12 others(29): Show c.-121-14021_-121-14014delTATATATA		SGK3	ENSG00000104205.16	transcript	ENST00000521198.7	protein_coding	1/16					INFO_REALIGN_3_PRIME	chr8	TogoVar
SGK3_chr8_66707781_66867022	66839498	GATATATA others(1): Show GATATATAT	G G	intron_variant intron_variant	MODIFIER	HG02109.hp1 HG02258.hp1 HG02293.hp2 others(2): Show HG02109.hp1 HG02258.hp1 HG02293.hp2 HG02572.hp2 NA18522.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0069 a0001c0001t0001g0080 a0001c0001t0001g0081 others(2): Show a0001c0001t0001g0069 a0001c0001t0001g0080 a0001c0001t0001g0081 a0001c0001t0001g0121 a0001c0001t0001g0133	5	142	0.0352	-8	c.742 others(23): Show c.742-452_742-445delATATATAT		SGK3	ENSG00000104205.16	transcript	ENST00000521198.7	protein_coding	10/16					INFO_REALIGN_3_PRIME	chr8	TogoVar
SGK3_chr8_66707781_66867022	66845693	CTTATTTA others(1): Show CTTATTTAT	C C	intron_variant intron_variant	MODIFIER	HG00741.hp2 HG01192.hp1 HG01978.hp2 others(12): Show HG00741.hp2 HG01192.hp1 HG01978.hp2 HG01981.hp1 HG02056.hp2 HG02293.hp1 HG02486.hp2 HG02683.hp2 HG02895.hp2 HG02897.hp2 HG03017.hp1 HG03139.hp2 HG03516.hp1 HG03579.hp2 HG03942.hp2	a0001 a0001	a0001c0002 a0001c0002	a0001c0002t0002 a0001c0002t0005 a0001c0002t0008 others(2): Show a0001c0002t0002 a0001c0002t0005 a0001c0002t0008 a0001c0002t0011 a0001c0002t0012	a0001c0002t0002g0003 a0001c0002t0002g0004 a0001c0002t0002g0029 others(12): Show a0001c0002t0002g0003 a0001c0002t0002g0004 a0001c0002t0002g0029 a0001c0002t0002g0030 a0001c0002t0002g0031 a0001c0002t0002g0032 a0001c0002t0002g0033 a0001c0002t0002g0140 a0001c0002t0002g0141 a0001c0002t0002g0142 a0001c0002t0005g0064 a0001c0002t0005g0065 a0001c0002t0008g0123 a0001c0002t0011g0034 a0001c0002t0012g0028	15	142	0.1056	-8	c.107 others(27): Show c.1075-1463_1075-1456delTTATTTAT		SGK3	ENSG00000104205.16	transcript	ENST00000521198.7	protein_coding	14/16					INFO_REALIGN_3_PRIME	chr8	TogoVar
SGK3_chr8_66707781_66867022	66857791	GTGTGTGT others(1): Show GTGTGTGTA	G G	intron_variant intron_variant	MODIFIER	HG02486.hp2 HG03139.hp2 HG02486.hp2 HG03139.hp2	a0001 a0001	a0001c0002 a0001c0002	a0001c0002t0002 a0001c0002t0002	a0001c0002t0002g0003 a0001c0002t0002g0004 a0001c0002t0002g0003 a0001c0002t0002g0004	2	142	0.0141	-8	c.132 others(27): Show c.1321-1612_1321-1605delATGTGTGT		SGK3	ENSG00000104205.16	transcript	ENST00000521198.7	protein_coding	16/16					INFO_REALIGN_3_PRIME	chr8	TogoVar
SGK3_chr8_66707781_66867022	66857799	ATGTGTGT others(1): Show ATGTGTGTG	A A	intron_variant intron_variant	MODIFIER	HG01070.hp2 HG01071.hp1 HG02559.hp1 others(8): Show HG01070.hp2 HG01071.hp1 HG02559.hp1 HG02717.hp2 HG02809.hp1 HG02809.hp2 HG02818.hp2 HG02922.hp1 HG03041.hp2 HG03453.hp2 NA18522.hp2	a0001 a0001	a0001c0002 a0001c0002	a0001c0002t0002 a0001c0002t0003 a0001c0002t0006 a0001c0002t0002 a0001c0002t0003 a0001c0002t0006	a0001c0002t0002g0009 a0001c0002t0002g0024 a0001c0002t0003g0013 others(8): Show a0001c0002t0002g0009 a0001c0002t0002g0024 a0001c0002t0003g0013 a0001c0002t0003g0018 a0001c0002t0003g0019 a0001c0002t0003g0020 a0001c0002t0003g0021 a0001c0002t0003g0060 a0001c0002t0003g0067 a0001c0002t0003g0088 a0001c0002t0006g0055	11	142	0.0775	-8	c.132 others(27): Show c.1321-1576_1321-1569delGTGTGTGT		SGK3	ENSG00000104205.16	transcript	ENST00000521198.7	protein_coding	16/16					INFO_REALIGN_3_PRIME	chr8	TogoVar
SGMS1_chr10_50300600_50628956	50400396	CATATATA others(1): Show CATATATAT	C C	intron_variant intron_variant	MODIFIER	HG00733.hp1 HG01081.hp2 HG01943.hp1 others(22): Show HG00733.hp1 HG01081.hp2 HG01943.hp1 HG01978.hp2 HG02257.hp2 HG02280.hp1 HG02300.hp2 HG02602.hp1 HG02717.hp2 HG02735.hp2 HG02809.hp1 HG03471.hp2 HG03516.hp2 HG04199.hp2 NA18948.hp2 NA18961.hp1 NA18966.hp1 NA19030.hp1 NA19058.hp1 NA19074.hp2 NA19077.hp2 NA19079.hp2 NA19085.hp1 NA21309.hp2 homoSapiens_chm13v2.hp1	a0001 a0001	a0001c0001 a0001c0002 a0001c0001 a0001c0002	a0001c0001t0001 a0001c0001t0002 a0001c0001t0003 others(4): Show a0001c0001t0001 a0001c0001t0002 a0001c0001t0003 a0001c0001t0005 a0001c0002t0001 a0001c0002t0002 a0001c0002t0004	a0001c0001t0001g0014 a0001c0001t0001g0040 a0001c0001t0001g0042 others(22): Show a0001c0001t0001g0014 a0001c0001t0001g0040 a0001c0001t0001g0042 a0001c0001t0001g0055 a0001c0001t0001g0111 a0001c0001t0001g0152 a0001c0001t0001g0166 a0001c0001t0001g0170 a0001c0001t0001g0172 a0001c0001t0001g0176 a0001c0001t0001g0250 a0001c0001t0002g0035 a0001c0001t0002g0251 a0001c0001t0002g0252 a0001c0001t0003g0204 a0001c0001t0003g0210 a0001c0001t0003g0217 a0001c0001t0005g0203 a0001c0002t0001g0034 a0001c0002t0001g0191 a0001c0002t0001g0196 a0001c0002t0001g0304 a0001c0002t0001g0305 a0001c0002t0002g0300 a0001c0002t0004g0088	25	312	0.0801	-8	c.-23 others(29): Show c.-232+33072_-232+33079delATATATAT		SGMS1	ENSG00000198964.14	transcript	ENST00000361781.7	protein_coding	6/10						chr10	TogoVar
SGMS1_chr10_50300600_50628956	50429734	CACACACA others(1): Show CACACACAT	C C	intron_variant intron_variant	MODIFIER	HG00140.hp2 HG00733.hp1 HG00738.hp2 others(32): Show HG00140.hp2 HG00733.hp1 HG00738.hp2 HG01069.hp2 HG01081.hp2 HG01517.hp1 HG01884.hp2 HG02451.hp2 HG02572.hp2 HG02622.hp2 HG02630.hp2 HG02735.hp2 HG02970.hp1 HG03098.hp1 HG03209.hp2 HG03540.hp1 HG03669.hp1 HG03704.hp1 HG03704.hp2 HG04199.hp1 HG04204.hp2 NA18940.hp1 NA18949.hp2 NA18959.hp2 NA18966.hp1 NA19003.hp1 NA19030.hp1 NA19065.hp1 NA19077.hp1 NA19082.hp2 NA19085.hp1 NA19240.hp1 NA20300.hp2 NA20905.hp1 NA20905.hp2	a0001 a0001	a0001c0001 a0001c0002 a0001c0001 a0001c0002	a0001c0001t0001 a0001c0001t0002 a0001c0001t0004 others(7): Show a0001c0001t0001 a0001c0001t0002 a0001c0001t0004 a0001c0001t0009 a0001c0001t0014 a0001c0002t0001 a0001c0002t0002 a0001c0002t0003 a0001c0002t0008 a0001c0002t0010	a0001c0001t0001g0021 a0001c0001t0001g0042 a0001c0001t0001g0069 others(32): Show a0001c0001t0001g0021 a0001c0001t0001g0042 a0001c0001t0001g0069 a0001c0001t0001g0117 a0001c0001t0001g0135 a0001c0001t0001g0156 a0001c0001t0001g0189 a0001c0001t0001g0250 a0001c0001t0001g0279 a0001c0001t0002g0075 a0001c0001t0004g0044 a0001c0001t0004g0134 a0001c0001t0009g0133 a0001c0001t0014g0029 a0001c0002t0001g0034 a0001c0002t0001g0067 a0001c0002t0001g0074 a0001c0002t0001g0076 a0001c0002t0001g0080 a0001c0002t0001g0081 a0001c0002t0001g0091 a0001c0002t0001g0092 a0001c0002t0001g0131 a0001c0002t0001g0200 a0001c0002t0001g0201 a0001c0002t0001g0230 a0001c0002t0001g0294 a0001c0002t0001g0304 a0001c0002t0001g0305 a0001c0002t0002g0300 a0001c0002t0003g0227 a0001c0002t0003g0241 a0001c0002t0008g0036 a0001c0002t0008g0051 a0001c0002t0010g0030	35	312	0.1122	-8	c.-23 others(27): Show c.-232+3734_-232+3741delATGTGTGT		SGMS1	ENSG00000198964.14	transcript	ENST00000361781.7	protein_coding	6/10						chr10	TogoVar
SGMS1_chr10_50300600_50628956	50453837	AGGAGGGA others(1): Show AGGAGGGAG	A A	intron_variant intron_variant	MODIFIER	HG00140.hp2 HG00733.hp1 HG00738.hp2 others(23): Show HG00140.hp2 HG00733.hp1 HG00738.hp2 HG01069.hp2 HG01081.hp2 HG01106.hp1 HG01167.hp1 HG01169.hp1 HG01358.hp2 HG01517.hp1 HG02257.hp2 HG02572.hp2 HG02615.hp2 HG02630.hp2 HG02683.hp2 HG02735.hp2 HG02922.hp1 HG03098.hp1 HG03225.hp1 HG03669.hp1 HG03704.hp1 NA18906.hp2 NA20300.hp2 NA20805.hp1 NA20905.hp1 NA21309.hp2	a0001 a0001	a0001c0001 a0001c0002 a0001c0001 a0001c0002	a0001c0001t0001 a0001c0001t0002 a0001c0001t0014 others(5): Show a0001c0001t0001 a0001c0001t0002 a0001c0001t0014 a0001c0002t0001 a0001c0002t0003 a0001c0002t0004 a0001c0002t0008 a0001c0002t0010	a0001c0001t0001g0007 a0001c0001t0001g0060 a0001c0001t0001g0111 others(23): Show a0001c0001t0001g0007 a0001c0001t0001g0060 a0001c0001t0001g0111 a0001c0001t0001g0112 a0001c0001t0002g0082 a0001c0001t0002g0083 a0001c0001t0002g0084 a0001c0001t0014g0029 a0001c0002t0001g0034 a0001c0002t0001g0061 a0001c0002t0001g0080 a0001c0002t0001g0081 a0001c0002t0001g0085 a0001c0002t0001g0200 a0001c0002t0001g0230 a0001c0002t0001g0271 a0001c0002t0001g0294 a0001c0002t0001g0304 a0001c0002t0001g0305 a0001c0002t0003g0227 a0001c0002t0003g0241 a0001c0002t0004g0088 a0001c0002t0008g0036 a0001c0002t0008g0051 a0001c0002t0010g0030 a0001c0002t0010g0108	26	312	0.0833	-8	c.-31 others(27): Show c.-313+6828_-313+6835delCTCCCTCC		SGMS1	ENSG00000198964.14	transcript	ENST00000361781.7	protein_coding	5/10						chr10	TogoVar
SGMS1_chr10_50300600_50628956	50487985	TTTTATTT others(1): Show TTTTATTTA	T T	intron_variant intron_variant	MODIFIER	HG00558.hp1 HG00639.hp1 HG01074.hp2 others(35): Show HG00558.hp1 HG00639.hp1 HG01074.hp2 HG01168.hp1 HG01169.hp2 HG01358.hp1 HG01361.hp1 HG01496.hp2 HG01981.hp1 HG01993.hp2 HG02015.hp1 HG02027.hp2 HG02074.hp1 HG02080.hp2 HG02148.hp1 HG02523.hp1 HG02572.hp1 HG02647.hp2 HG02735.hp1 HG03927.hp2 HG06807.hp2 NA18612.hp2 NA18939.hp2 NA18940.hp2 NA18963.hp1 NA18966.hp2 NA18968.hp1 NA18969.hp2 NA18970.hp1 NA18978.hp1 NA18993.hp1 NA19000.hp1 NA19056.hp1 NA19063.hp1 NA19079.hp1 NA19089.hp1 NA19091.hp1 NA20129.hp1	a0001 a0001	a0001c0001 a0001c0002 a0001c0003 a0001c0001 a0001c0002 a0001c0003	a0001c0001t0001 a0001c0001t0004 a0001c0002t0001 others(3): Show a0001c0001t0001 a0001c0001t0004 a0001c0002t0001 a0001c0002t0002 a0001c0002t0004 a0001c0003t0001	a0001c0001t0001g0006 a0001c0001t0001g0096 a0001c0001t0001g0120 others(35): Show a0001c0001t0001g0006 a0001c0001t0001g0096 a0001c0001t0001g0120 a0001c0001t0001g0143 a0001c0001t0001g0244 a0001c0001t0001g0263 a0001c0001t0004g0009 a0001c0002t0001g0058 a0001c0002t0001g0059 a0001c0002t0001g0062 a0001c0002t0001g0065 a0001c0002t0001g0068 a0001c0002t0001g0070 a0001c0002t0001g0071 a0001c0002t0001g0079 a0001c0002t0001g0090 a0001c0002t0001g0098 a0001c0002t0001g0100 a0001c0002t0001g0101 a0001c0002t0001g0102 a0001c0002t0001g0103 a0001c0002t0001g0104 a0001c0002t0001g0106 a0001c0002t0001g0109 a0001c0002t0001g0145 a0001c0002t0001g0147 a0001c0002t0001g0155 a0001c0002t0001g0162 a0001c0002t0001g0198 a0001c0002t0001g0211 a0001c0002t0001g0212 a0001c0002t0001g0239 a0001c0002t0001g0258 a0001c0002t0001g0299 a0001c0002t0001g0310 a0001c0002t0002g0154 a0001c0002t0004g0119 a0001c0003t0001g0064	38	312	0.1218	-8	c.-49 others(29): Show c.-497-21061_-497-21054delTAAATAAA		SGMS1	ENSG00000198964.14	transcript	ENST00000361781.7	protein_coding	3/10						chr10	TogoVar
SGMS1_chr10_50300600_50628956	50532225	CTGTGTGT others(1): Show CTGTGTGTG	C C	intron_variant intron_variant	MODIFIER	HG02602.hp2 HG03453.hp2 HG03492.hp1 HG02602.hp2 HG03453.hp2 HG03492.hp1	a0001 a0001	a0001c0001 a0001c0002 a0001c0001 a0001c0002	a0001c0001t0002 a0001c0001t0003 a0001c0002t0001 a0001c0001t0002 a0001c0001t0003 a0001c0002t0001	a0001c0001t0002g0295 a0001c0001t0003g0235 a0001c0002t0001g0138 a0001c0001t0002g0295 a0001c0001t0003g0235 a0001c0002t0001g0138	3	312	0.0096	-8	c.-58 others(29): Show c.-588-12312_-588-12305delCACACACA		SGMS1	ENSG00000198964.14	transcript	ENST00000361781.7	protein_coding	2/10						chr10	TogoVar
SGMS1_chr10_50300600_50628956	50587633	ATGTGTGT others(1): Show ATGTGTGTG	A A	intron_variant intron_variant	MODIFIER	HG02809.hp2 HG03471.hp1 HG03516.hp1 others(1): Show HG02809.hp2 HG03471.hp1 HG03516.hp1 NA18522.hp1	a0001 a0001	a0001c0002 a0001c0002	a0001c0002t0006 a0001c0002t0006	a0001c0002t0006g0002 a0001c0002t0006g0003 a0001c0002t0006g0004 others(1): Show a0001c0002t0006g0002 a0001c0002t0006g0003 a0001c0002t0006g0004 a0001c0002t0006g0005	4	312	0.0128	-8	c.-58 others(27): Show c.-589+2512_-589+2519delCACACACA		SGMS1	ENSG00000198964.14	transcript	ENST00000361781.7	protein_coding	2/10						chr10	TogoVar
SGMS2_chr4_107819932_107920047	107861534	TATTTCTT others(1): Show TATTTCTTG	T T	intron_variant intron_variant	MODIFIER	HG02895.hp2 HG02897.hp1 HG03041.hp2 HG02895.hp2 HG02897.hp1 HG03041.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0008 a0001c0001t0008	a0001c0001t0008g0007 a0001c0001t0008g0224 a0001c0001t0008g0007 a0001c0001t0008g0224	3	270	0.0111	-8	c.-24 others(27): Show c.-245+2982_-245+2989delATTTCTTG		SGMS2	ENSG00000164023.15	transcript	ENST00000690982.1	protein_coding	2/6						chr4	TogoVar
SGMS2_chr4_107819932_107920047	107886364	ATTTTTTT others(1): Show ATTTTTTTT	A A	intron_variant intron_variant	MODIFIER	HG01123.hp1 HG01175.hp1 HG01243.hp2 others(17): Show HG01123.hp1 HG01175.hp1 HG01243.hp2 HG01361.hp2 HG01934.hp1 HG01993.hp2 HG02145.hp1 HG02145.hp2 HG03471.hp1 HG03486.hp1 HG03540.hp2 HG04115.hp2 NA18942.hp1 NA18946.hp1 NA18995.hp1 NA18995.hp2 NA19006.hp1 NA19030.hp2 NA19085.hp2 NA20129.hp1	a0001 a0001	a0001c0001 a0001c0002 a0001c0007 a0001c0001 a0001c0002 a0001c0007	a0001c0001t0001 a0001c0001t0002 a0001c0001t0003 others(3): Show a0001c0001t0001 a0001c0001t0002 a0001c0001t0003 a0001c0001t0010 a0001c0002t0001 a0001c0007t0025	a0001c0001t0001g0018 a0001c0001t0001g0019 a0001c0001t0001g0020 others(17): Show a0001c0001t0001g0018 a0001c0001t0001g0019 a0001c0001t0001g0020 a0001c0001t0001g0022 a0001c0001t0001g0023 a0001c0001t0001g0029 a0001c0001t0001g0062 a0001c0001t0001g0140 a0001c0001t0001g0141 a0001c0001t0001g0175 a0001c0001t0001g0182 a0001c0001t0001g0185 a0001c0001t0001g0187 a0001c0001t0001g0198 a0001c0001t0002g0169 a0001c0001t0003g0103 a0001c0001t0003g0255 a0001c0001t0010g0238 a0001c0002t0001g0067 a0001c0007t0025g0114	20	270	0.0741	-8	c.-24 others(27): Show c.-244-8923_-244-8916delTTTTTTTT		SGMS2	ENSG00000164023.15	transcript	ENST00000690982.1	protein_coding	2/6					INFO_REALIGN_3_PRIME	chr4	TogoVar
SGO2_chr2_200521207_200589096	200522317	ATTCTTTC others(1): Show ATTCTTTCT	A A	upstream_gene_variant upstream_gene_variant	MODIFIER	HG00639.hp2 HG01167.hp2 HG01169.hp1 others(12): Show HG00639.hp2 HG01167.hp2 HG01169.hp1 HG01243.hp1 HG01257.hp1 HG01981.hp2 HG02055.hp1 HG02647.hp2 HG02683.hp1 HG02895.hp1 HG02897.hp2 HG03453.hp1 NA18998.hp2 NA19089.hp1 NA19091.hp2	a0001 a0003 a0001 a0003	a0001c0001 a0001c0011 a0003c0006 a0001c0001 a0001c0011 a0003c0006	a0001c0001t0001 a0001c0011t0001 a0003c0006t0001 others(1): Show a0001c0001t0001 a0001c0011t0001 a0003c0006t0001 a0003c0006t0003	a0001c0001t0001g0033 a0001c0001t0001g0192 a0001c0011t0001g0230 others(11): Show a0001c0001t0001g0033 a0001c0001t0001g0192 a0001c0011t0001g0230 a0003c0006t0001g0029 a0003c0006t0001g0030 a0003c0006t0001g0163 a0003c0006t0001g0165 a0003c0006t0001g0168 a0003c0006t0001g0169 a0003c0006t0001g0170 a0003c0006t0001g0171 a0003c0006t0001g0172 a0003c0006t0001g0174 a0003c0006t0003g0030	15	384	0.0391	-8	c.-39 others(19): Show c.-3937_-3930delTTCTTTCT		SGO2	ENSG00000163535.18	transcript	ENST00000357799.9	protein_coding					3889		chr2	TogoVar
SGO2_chr2_200521207_200589096	200544692	GATCTATC others(1): Show GATCTATCT	G G	intron_variant intron_variant	MODIFIER	HG03710.hp1 NA18955.hp1 NA19086.hp2 HG03710.hp1 NA18955.hp1 NA19086.hp2	a0001 a0006 a0001 a0006	a0001c0001 a0001c0003 a0006c0009 a0001c0001 a0001c0003 a0006c0009	a0001c0001t0001 a0001c0003t0002 a0006c0009t0002 a0001c0001t0001 a0001c0003t0002 a0006c0009t0002	a0001c0001t0001g0199 a0001c0003t0002g0105 a0006c0009t0002g0138 a0001c0001t0001g0199 a0001c0003t0002g0105 a0006c0009t0002g0138	3	384	0.0078	-8	c.473 others(25): Show c.473+2065_473+2072delATCTATCT		SGO2	ENSG00000163535.18	transcript	ENST00000357799.9	protein_coding	5/8					INFO_REALIGN_3_PRIME	chr2	TogoVar
SGPL1_chr10_70810948_70886184	70852697	CATGTGTG others(1): Show CATGTGTGT	C C	intron_variant intron_variant	MODIFIER	HG02735.hp1 HG03239.hp1 HG03490.hp2 HG02735.hp1 HG03239.hp1 HG03490.hp2	a0001 a0001	a0001c0003 a0001c0003	a0001c0003t0031 a0001c0003t0047 a0001c0003t0031 a0001c0003t0047	a0001c0003t0031g0041 a0001c0003t0047g0217 a0001c0003t0031g0041 a0001c0003t0047g0217	3	402	0.0075	-8	c.261 others(25): Show c.261+1496_261+1503delATGTGTGT		SGPL1	ENSG00000166224.18	transcript	ENST00000373202.8	protein_coding	4/14					INFO_REALIGN_3_PRIME	chr10	TogoVar
SGPL1_chr10_70810948_70886184	70859842	TTAGATTC others(1): Show TTAGATTCA	T T	intron_variant intron_variant	MODIFIER	HG02451.hp2 HG02738.hp1 HG02886.hp1 HG02451.hp2 HG02738.hp1 HG02886.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0014 a0001c0001t0014	a0001c0001t0014g0306 a0001c0001t0014g0307 a0001c0001t0014g0308 a0001c0001t0014g0306 a0001c0001t0014g0307 a0001c0001t0014g0308	3	402	0.0075	-8	c.615 others(23): Show c.615+344_615+351delTAGATTCA		SGPL1	ENSG00000166224.18	transcript	ENST00000373202.8	protein_coding	7/14						chr10	TogoVar
SGPL1_chr10_70810948_70886184	70859854	AATGTAAA others(1): Show AATGTAAAT	A A	intron_variant intron_variant	MODIFIER	HG02451.hp2 HG02738.hp1 HG02886.hp1 HG02451.hp2 HG02738.hp1 HG02886.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0014 a0001c0001t0014	a0001c0001t0014g0306 a0001c0001t0014g0307 a0001c0001t0014g0308 a0001c0001t0014g0306 a0001c0001t0014g0307 a0001c0001t0014g0308	3	402	0.0075	-8	c.615 others(23): Show c.615+360_615+367delAAATATGT		SGPL1	ENSG00000166224.18	transcript	ENST00000373202.8	protein_coding	7/14					INFO_REALIGN_3_PRIME	chr10	TogoVar
SGPL1_chr10_70810948_70886184	70867781	TTCACTTA others(1): Show TTCACTTAA	T T	intron_variant intron_variant	MODIFIER	HG01168.hp1 HG01175.hp1 HG01192.hp1 others(1): Show HG01168.hp1 HG01175.hp1 HG01192.hp1 HG03654.hp1	a0001 a0001	a0001c0006 a0001c0006	a0001c0006t0019 a0001c0006t0019	a0001c0006t0019g0053 a0001c0006t0019g0054 a0001c0006t0019g0055 others(1): Show a0001c0006t0019g0053 a0001c0006t0019g0054 a0001c0006t0019g0055 a0001c0006t0019g0056	4	402	0.0100	-8	c.616 others(23): Show c.616-563_616-556delTCACTTAA		SGPL1	ENSG00000166224.18	transcript	ENST00000373202.8	protein_coding	7/14						chr10	TogoVar
SGPP1_chr14_63679216_63733065	63718977	CATATATA others(1): Show CATATATAT	C C	intron_variant intron_variant	MODIFIER	HG01243.hp2 HG02723.hp2 HG03130.hp1 others(3): Show HG01243.hp2 HG02723.hp2 HG03130.hp1 HG03209.hp1 HG03654.hp2 NA18612.hp2	a0001 a0002 a0001 a0002	a0001c0001 a0002c0005 a0001c0001 a0002c0005	a0001c0001t0001 a0001c0001t0006 a0002c0005t0002 a0001c0001t0001 a0001c0001t0006 a0002c0005t0002	a0001c0001t0001g0072 a0001c0001t0001g0224 a0001c0001t0001g0235 others(3): Show a0001c0001t0001g0072 a0001c0001t0001g0224 a0001c0001t0001g0235 a0001c0001t0001g0258 a0001c0001t0006g0075 a0002c0005t0002g0045	6	288	0.0208	-8	c.684 others(25): Show c.684+8276_684+8283delATATATAT		SGPP1	ENSG00000126821.8	transcript	ENST00000247225.7	protein_coding	1/2						chr14	TogoVar
SGPP2_chr2_222419543_222567621	222420210	TGTCATCT others(1): Show TGTCATCTG	T T	upstream_gene_variant upstream_gene_variant	MODIFIER	HG00408.hp2 HG00609.hp2 HG00639.hp1 others(134): Show HG00408.hp2 HG00609.hp2 HG00639.hp1 HG00735.hp1 HG00735.hp2 HG00738.hp1 HG00738.hp2 HG00741.hp1 HG00741.hp2 HG01069.hp2 HG01070.hp1 HG01071.hp1 HG01071.hp2 HG01074.hp1 HG01074.hp2 HG01081.hp1 HG01099.hp1 HG01109.hp2 HG01123.hp1 HG01123.hp2 HG01169.hp1 HG01169.hp2 HG01175.hp2 HG01256.hp1 HG01257.hp1 HG01257.hp2 HG01258.hp1 HG01258.hp2 HG01261.hp2 HG01346.hp1 HG01358.hp1 HG01358.hp2 HG01361.hp1 HG01361.hp2 HG01515.hp2 HG01516.hp1 HG01891.hp1 HG01928.hp2 HG01934.hp1 HG01952.hp1 HG01975.hp1 HG02004.hp1 HG02004.hp2 HG02015.hp1 HG02027.hp1 HG02083.hp2 HG02109.hp1 HG02109.hp2 HG02132.hp1 HG02132.hp2 HG02523.hp1 HG02572.hp1 HG02647.hp2 HG02683.hp1 HG02717.hp1 HG02735.hp1 HG02738.hp2 HG02809.hp2 HG02886.hp2 HG02895.hp1 HG02922.hp2 HG03098.hp2 HG03130.hp2 HG03195.hp2 HG03225.hp1 HG03453.hp2 HG03471.hp1 HG03490.hp2 HG03492.hp1 HG03516.hp1 HG03540.hp1 HG03654.hp1 HG03654.hp2 HG03669.hp2 HG03834.hp1 HG04184.hp1 HG04204.hp1 HG04204.hp2 NA18906.hp1 NA18942.hp2 NA18945.hp2 NA18946.hp1 NA18946.hp2 NA18954.hp1 NA18954.hp2 NA18957.hp1 NA18957.hp2 NA18960.hp2 NA18963.hp1 NA18964.hp2 NA18965.hp1 NA18967.hp2 NA18968.hp1 NA18968.hp2 NA18971.hp2 NA18974.hp1 NA18975.hp2 NA18979.hp1 NA18979.hp2 NA18980.hp1 NA18984.hp1 NA18984.hp2 NA18986.hp2 NA18988.hp2 NA19000.hp2 NA19002.hp1 NA19003.hp1 NA19005.hp1 NA19005.hp2 NA19009.hp2 NA19010.hp1 NA19010.hp2 NA19056.hp1 NA19056.hp2 NA19060.hp1 NA19060.hp2 NA19065.hp1 NA19066.hp1 NA19068.hp2 NA19070.hp1 NA19070.hp2 NA19072.hp1 NA19072.hp2 NA19074.hp1 NA19074.hp2 NA19077.hp1 NA19084.hp2 NA19086.hp1 NA19086.hp2 NA19087.hp1 NA19088.hp1 NA19089.hp2 NA20129.hp1 NA20300.hp2 NA20805.hp2 NA20905.hp1 homoSapiens_chm13v2.hp1	a0001 a0002 a0003 a0001 a0002 a0003	a0001c0001 a0001c0002 a0001c0003 others(8): Show a0001c0001 a0001c0002 a0001c0003 a0001c0004 a0001c0005 a0001c0006 a0001c0007 a0001c0009 a0001c0013 a0002c0008 a0003c0012	a0001c0001t0001 a0001c0001t0002 a0001c0001t0003 others(62): Show a0001c0001t0001 a0001c0001t0002 a0001c0001t0003 a0001c0001t0004 a0001c0001t0005 a0001c0001t0006 a0001c0001t0007 a0001c0001t0008 a0001c0001t0010 a0001c0001t0011 a0001c0001t0012 a0001c0001t0013 a0001c0001t0014 a0001c0001t0015 a0001c0001t0016 a0001c0001t0020 a0001c0001t0021 a0001c0001t0024 a0001c0001t0026 a0001c0001t0028 a0001c0001t0029 a0001c0001t0030 a0001c0001t0031 a0001c0001t0033 a0001c0001t0039 a0001c0001t0040 a0001c0001t0041 a0001c0001t0044 a0001c0001t0046 a0001c0001t0047 a0001c0001t0048 a0001c0001t0050 a0001c0001t0052 a0001c0001t0053 a0001c0001t0055 a0001c0001t0057 a0001c0001t0060 a0001c0001t0061 a0001c0001t0062 a0001c0001t0063 a0001c0001t0064 a0001c0001t0066 a0001c0001t0070 a0001c0001t0093 a0001c0001t0096 a0001c0001t0098 a0001c0001t0100 a0001c0002t0009 a0001c0002t0019 a0001c0002t0025 a0001c0002t0034 a0001c0002t0080 a0001c0002t0092 a0001c0002t0095 a0001c0003t0027 a0001c0003t0049 a0001c0004t0077 a0001c0005t0089 a0001c0006t0011 a0001c0007t0019 a0001c0009t0001 a0001c0013t0009 a0002c0008t0005 a0002c0008t0023 a0003c0012t0001	a0001c0001t0001g0026 a0001c0001t0001g0027 a0001c0001t0001g0038 others(134): Show a0001c0001t0001g0026 a0001c0001t0001g0027 a0001c0001t0001g0038 a0001c0001t0001g0040 a0001c0001t0001g0052 a0001c0001t0001g0063 a0001c0001t0001g0076 a0001c0001t0001g0085 a0001c0001t0001g0087 a0001c0001t0001g0101 a0001c0001t0001g0103 a0001c0001t0001g0129 a0001c0001t0001g0137 a0001c0001t0001g0140 a0001c0001t0001g0143 a0001c0001t0001g0163 a0001c0001t0001g0164 a0001c0001t0001g0270 a0001c0001t0001g0271 a0001c0001t0002g0017 a0001c0001t0002g0034 a0001c0001t0002g0046 a0001c0001t0002g0053 a0001c0001t0002g0070 a0001c0001t0002g0088 a0001c0001t0002g0106 a0001c0001t0002g0117 a0001c0001t0002g0128 a0001c0001t0003g0028 a0001c0001t0003g0039 a0001c0001t0003g0042 a0001c0001t0003g0055 a0001c0001t0003g0069 a0001c0001t0003g0077 a0001c0001t0003g0090 a0001c0001t0003g0196 a0001c0001t0004g0057 a0001c0001t0004g0138 a0001c0001t0004g0167 a0001c0001t0005g0024 a0001c0001t0005g0035 a0001c0001t0005g0094 a0001c0001t0005g0109 a0001c0001t0005g0132 a0001c0001t0006g0047 a0001c0001t0006g0050 a0001c0001t0006g0056 a0001c0001t0006g0073 a0001c0001t0006g0092 a0001c0001t0006g0108 a0001c0001t0007g0058 a0001c0001t0007g0059 a0001c0001t0007g0115 a0001c0001t0007g0116 a0001c0001t0008g0036 a0001c0001t0008g0037 a0001c0001t0008g0067 a0001c0001t0008g0068 a0001c0001t0008g0075 a0001c0001t0010g0080 a0001c0001t0010g0089 a0001c0001t0011g0078 a0001c0001t0011g0083 a0001c0001t0011g0131 a0001c0001t0012g0023 a0001c0001t0012g0127 a0001c0001t0013g0025 a0001c0001t0013g0045 a0001c0001t0013g0141 a0001c0001t0014g0022 a0001c0001t0014g0102 a0001c0001t0015g0018 a0001c0001t0015g0020 a0001c0001t0015g0099 a0001c0001t0015g0142 a0001c0001t0016g0015 a0001c0001t0016g0061 a0001c0001t0016g0114 a0001c0001t0020g0110 a0001c0001t0021g0097 a0001c0001t0024g0104 a0001c0001t0024g0124 a0001c0001t0026g0065 a0001c0001t0026g0066 a0001c0001t0028g0021 a0001c0001t0029g0079 a0001c0001t0030g0072 a0001c0001t0030g0100 a0001c0001t0031g0086 a0001c0001t0031g0158 a0001c0001t0033g0016 a0001c0001t0039g0011 a0001c0001t0039g0019 a0001c0001t0040g0118 a0001c0001t0041g0130 a0001c0001t0044g0051 a0001c0001t0046g0071 a0001c0001t0047g0064 a0001c0001t0048g0113 a0001c0001t0050g0081 a0001c0001t0052g0136 a0001c0001t0053g0269 a0001c0001t0055g0098 a0001c0001t0057g0082 a0001c0001t0060g0112 a0001c0001t0061g0048 a0001c0001t0062g0054 a0001c0001t0063g0095 a0001c0001t0064g0060 a0001c0001t0066g0165 a0001c0001t0070g0091 a0001c0001t0093g0105 a0001c0001t0096g0084 a0001c0001t0098g0133 a0001c0001t0100g0093 a0001c0002t0009g0260 a0001c0002t0009g0261 a0001c0002t0019g0162 a0001c0002t0025g0041 a0001c0002t0034g0062 a0001c0002t0080g0107 a0001c0002t0092g0001 a0001c0002t0095g0014 a0001c0003t0027g0032 a0001c0003t0049g0161 a0001c0004t0077g0010 a0001c0005t0089g0111 a0001c0006t0011g0074 a0001c0007t0019g0012 a0001c0007t0019g0013 a0001c0007t0019g0159 a0001c0009t0001g0044 a0001c0009t0001g0135 a0001c0013t0009g0033 a0002c0008t0005g0096 a0002c0008t0023g0168 a0003c0012t0001g0166	137	272	0.5037	-8	c.-43 others(19): Show c.-4392_-4385delGTCATCTG		SGPP2	ENSG00000163082.10	transcript	ENST00000321276.8	protein_coding					4332		chr2	TogoVar
SGPP2_chr2_222419543_222567621	222434975	TACACACA others(1): Show TACACACAC	T T	intron_variant intron_variant	MODIFIER	HG00280.hp1 HG00323.hp1 HG00408.hp1 others(123): Show HG00280.hp1 HG00323.hp1 HG00408.hp1 HG00408.hp2 HG00609.hp2 HG00639.hp1 HG00639.hp2 HG00642.hp2 HG00738.hp1 HG00741.hp1 HG00741.hp2 HG01070.hp1 HG01071.hp1 HG01071.hp2 HG01074.hp1 HG01081.hp1 HG01081.hp2 HG01169.hp2 HG01175.hp2 HG01256.hp1 HG01257.hp1 HG01257.hp2 HG01261.hp2 HG01346.hp1 HG01346.hp2 HG01361.hp2 HG01496.hp2 HG01515.hp2 HG01516.hp1 HG01516.hp2 HG01891.hp1 HG01891.hp2 HG01928.hp1 HG01928.hp2 HG01934.hp2 HG01952.hp2 HG01975.hp2 HG02004.hp2 HG02015.hp1 HG02055.hp1 HG02055.hp2 HG02074.hp1 HG02083.hp2 HG02109.hp1 HG02132.hp1 HG02258.hp1 HG02258.hp2 HG02280.hp2 HG02451.hp2 HG02486.hp1 HG02523.hp1 HG02572.hp1 HG02622.hp1 HG02622.hp2 HG02647.hp2 HG02723.hp1 HG02735.hp1 HG02809.hp1 HG02809.hp2 HG02886.hp2 HG02895.hp1 HG02895.hp2 HG02922.hp1 HG03139.hp2 HG03195.hp1 HG03225.hp1 HG03471.hp1 HG03491.hp2 HG03492.hp1 HG03516.hp2 HG03540.hp1 HG03654.hp2 HG03669.hp2 HG03834.hp2 HG03927.hp1 HG04184.hp1 HG04199.hp2 HG04204.hp1 HG04204.hp2 HG04228.hp2 HG06807.hp2 NA18942.hp2 NA18946.hp2 NA18954.hp1 NA18954.hp2 NA18957.hp1 NA18960.hp1 NA18960.hp2 NA18963.hp1 NA18965.hp1 NA18966.hp1 NA18967.hp2 NA18971.hp1 NA18974.hp1 NA18974.hp2 NA18975.hp2 NA18979.hp1 NA18980.hp1 NA18980.hp2 NA18984.hp1 NA18986.hp2 NA19002.hp1 NA19003.hp1 NA19003.hp2 NA19005.hp2 NA19009.hp1 NA19056.hp2 NA19060.hp1 NA19060.hp2 NA19066.hp1 NA19066.hp2 NA19068.hp2 NA19070.hp2 NA19072.hp1 NA19072.hp2 NA19074.hp2 NA19077.hp1 NA19086.hp1 NA19087.hp1 NA19088.hp2 NA19089.hp2 NA20129.hp1 NA20300.hp2 NA20752.hp1 NA20805.hp2 homoSapiens_chm13v2.hp1	a0001 a0002 a0003 a0001 a0002 a0003	a0001c0001 a0001c0002 a0001c0003 others(9): Show a0001c0001 a0001c0002 a0001c0003 a0001c0004 a0001c0006 a0001c0007 a0001c0009 a0001c0010 a0001c0011 a0001c0014 a0002c0008 a0003c0012	a0001c0001t0001 a0001c0001t0002 a0001c0001t0003 others(64): Show a0001c0001t0001 a0001c0001t0002 a0001c0001t0003 a0001c0001t0004 a0001c0001t0005 a0001c0001t0006 a0001c0001t0007 a0001c0001t0008 a0001c0001t0010 a0001c0001t0011 a0001c0001t0013 a0001c0001t0014 a0001c0001t0015 a0001c0001t0017 a0001c0001t0020 a0001c0001t0021 a0001c0001t0023 a0001c0001t0024 a0001c0001t0026 a0001c0001t0030 a0001c0001t0031 a0001c0001t0032 a0001c0001t0033 a0001c0001t0039 a0001c0001t0040 a0001c0001t0041 a0001c0001t0042 a0001c0001t0044 a0001c0001t0046 a0001c0001t0053 a0001c0001t0055 a0001c0001t0057 a0001c0001t0062 a0001c0001t0063 a0001c0001t0065 a0001c0001t0066 a0001c0001t0070 a0001c0001t0082 a0001c0001t0093 a0001c0001t0096 a0001c0001t0098 a0001c0001t0100 a0001c0002t0009 a0001c0002t0018 a0001c0002t0019 a0001c0002t0034 a0001c0002t0035 a0001c0002t0037 a0001c0002t0092 a0001c0002t0094 a0001c0002t0095 a0001c0003t0022 a0001c0003t0027 a0001c0003t0049 a0001c0003t0071 a0001c0004t0036 a0001c0004t0073 a0001c0004t0077 a0001c0006t0022 a0001c0006t0043 a0001c0007t0019 a0001c0009t0001 a0001c0010t0018 a0001c0011t0035 a0001c0014t0010 a0002c0008t0005 a0003c0012t0001	a0001c0001t0001g0007 a0001c0001t0001g0026 a0001c0001t0001g0027 others(123): Show a0001c0001t0001g0007 a0001c0001t0001g0026 a0001c0001t0001g0027 a0001c0001t0001g0040 a0001c0001t0001g0063 a0001c0001t0001g0076 a0001c0001t0001g0087 a0001c0001t0001g0103 a0001c0001t0001g0120 a0001c0001t0001g0121 a0001c0001t0001g0123 a0001c0001t0001g0129 a0001c0001t0001g0140 a0001c0001t0001g0163 a0001c0001t0001g0164 a0001c0001t0001g0177 a0001c0001t0001g0183 a0001c0001t0001g0270 a0001c0001t0001g0271 a0001c0001t0002g0034 a0001c0001t0002g0053 a0001c0001t0002g0070 a0001c0001t0002g0088 a0001c0001t0002g0174 a0001c0001t0003g0028 a0001c0001t0003g0039 a0001c0001t0003g0055 a0001c0001t0003g0069 a0001c0001t0003g0077 a0001c0001t0003g0090 a0001c0001t0003g0171 a0001c0001t0003g0184 a0001c0001t0004g0008 a0001c0001t0004g0057 a0001c0001t0004g0125 a0001c0001t0004g0138 a0001c0001t0005g0024 a0001c0001t0005g0094 a0001c0001t0005g0132 a0001c0001t0005g0176 a0001c0001t0006g0047 a0001c0001t0006g0050 a0001c0001t0006g0073 a0001c0001t0006g0092 a0001c0001t0006g0108 a0001c0001t0006g0179 a0001c0001t0007g0049 a0001c0001t0007g0059 a0001c0001t0007g0115 a0001c0001t0007g0134 a0001c0001t0008g0006 a0001c0001t0008g0037 a0001c0001t0008g0043 a0001c0001t0008g0067 a0001c0001t0010g0080 a0001c0001t0011g0078 a0001c0001t0011g0083 a0001c0001t0011g0169 a0001c0001t0013g0031 a0001c0001t0013g0141 a0001c0001t0014g0102 a0001c0001t0015g0020 a0001c0001t0015g0099 a0001c0001t0015g0142 a0001c0001t0017g0188 a0001c0001t0017g0262 a0001c0001t0020g0191 a0001c0001t0020g0201 a0001c0001t0021g0126 a0001c0001t0023g0197 a0001c0001t0024g0104 a0001c0001t0024g0124 a0001c0001t0026g0066 a0001c0001t0030g0072 a0001c0001t0030g0100 a0001c0001t0031g0158 a0001c0001t0032g0182 a0001c0001t0033g0199 a0001c0001t0039g0011 a0001c0001t0040g0118 a0001c0001t0041g0130 a0001c0001t0042g0005 a0001c0001t0044g0051 a0001c0001t0046g0071 a0001c0001t0053g0269 a0001c0001t0055g0098 a0001c0001t0057g0082 a0001c0001t0062g0054 a0001c0001t0063g0095 a0001c0001t0065g0198 a0001c0001t0066g0165 a0001c0001t0070g0091 a0001c0001t0082g0264 a0001c0001t0093g0105 a0001c0001t0096g0084 a0001c0001t0098g0133 a0001c0001t0100g0093 a0001c0002t0009g0119 a0001c0002t0009g0263 a0001c0002t0018g0003 a0001c0002t0018g0004 a0001c0002t0019g0162 a0001c0002t0034g0062 a0001c0002t0035g0187 a0001c0002t0037g0268 a0001c0002t0092g0001 a0001c0002t0094g0189 a0001c0002t0095g0014 a0001c0003t0022g0190 a0001c0003t0027g0154 a0001c0003t0049g0161 a0001c0003t0071g0160 a0001c0004t0036g0180 a0001c0004t0073g0009 a0001c0004t0077g0010 a0001c0006t0022g0181 a0001c0006t0043g0122 a0001c0007t0019g0012 a0001c0007t0019g0013 a0001c0007t0019g0159 a0001c0009t0001g0135 a0001c0010t0018g0259 a0001c0011t0035g0002 a0001c0014t0010g0185 a0002c0008t0005g0096 a0003c0012t0001g0166	126	272	0.4632	-8	c.219 others(27): Show c.219+10184_219+10191delCACACACA		SGPP2	ENSG00000163082.10	transcript	ENST00000321276.8	protein_coding	1/4					INFO_REALIGN_3_PRIME	chr2	TogoVar
SGPP2_chr2_222419543_222567621	222478171	CGAGAGGG others(1): Show CGAGAGGGA	C C	intron_variant intron_variant	MODIFIER	HG02258.hp1 HG02572.hp1 HG02717.hp2 others(6): Show HG02258.hp1 HG02572.hp1 HG02717.hp2 HG02922.hp2 HG03130.hp2 HG03139.hp2 HG03195.hp2 HG03225.hp2 NA18522.hp1	a0001 a0001	a0001c0001 a0001c0002 a0001c0003 others(1): Show a0001c0001 a0001c0002 a0001c0003 a0001c0005	a0001c0001t0017 a0001c0001t0020 a0001c0002t0009 others(4): Show a0001c0001t0017 a0001c0001t0020 a0001c0002t0009 a0001c0002t0019 a0001c0003t0022 a0001c0003t0086 a0001c0005t0036	a0001c0001t0017g0188 a0001c0001t0020g0110 a0001c0001t0020g0208 others(6): Show a0001c0001t0017g0188 a0001c0001t0020g0110 a0001c0001t0020g0208 a0001c0002t0009g0260 a0001c0002t0009g0261 a0001c0002t0019g0162 a0001c0003t0022g0190 a0001c0003t0086g0204 a0001c0005t0036g0244	9	272	0.0331	-8	c.378 others(25): Show c.378+3463_378+3470delAGAGGGAG		SGPP2	ENSG00000163082.10	transcript	ENST00000321276.8	protein_coding	2/4					INFO_REALIGN_3_PRIME	chr2	TogoVar
SGPP2_chr2_222419543_222567621	222565901	ATATATAT others(1): Show ATATATATT	A A	downstream_gene_variant downstream_gene_variant	MODIFIER	HG01070.hp1 HG01071.hp1 HG01109.hp2 HG01070.hp1 HG01071.hp1 HG01109.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0003 a0001c0001t0016 a0001c0001t0001 a0001c0001t0003 a0001c0001t0016	a0001c0001t0001g0040 a0001c0001t0003g0039 a0001c0001t0016g0015 a0001c0001t0001g0040 a0001c0001t0003g0039 a0001c0001t0016g0015	3	272	0.0110	-8	c.70 others(19): Show c.7004_*7011delTATATATT		SGPP2	ENSG00000163082.10	transcript	ENST00000321276.8	protein_coding					3281		chr2	TogoVar
SGSM1_chr22_24801211_24932578	24845941	TTTTCTTT others(1): Show TTTTCTTTC	T T	intron_variant intron_variant	MODIFIER	HG00323.hp2 HG00423.hp2 HG00741.hp1 others(37): Show HG00323.hp2 HG00423.hp2 HG00741.hp1 HG01123.hp2 HG01256.hp2 HG01261.hp2 HG01361.hp1 HG01891.hp2 HG01934.hp2 HG02015.hp2 HG02080.hp1 HG02080.hp2 HG02083.hp2 HG02257.hp2 HG02630.hp2 HG02647.hp1 HG02717.hp1 HG02723.hp2 HG02818.hp1 HG02922.hp2 HG03139.hp1 HG03139.hp2 HG03239.hp1 HG03490.hp1 HG03516.hp1 HG03540.hp2 HG03688.hp1 HG04199.hp1 NA18941.hp2 NA18943.hp2 NA18954.hp1 NA18978.hp2 NA18982.hp1 NA18986.hp2 NA19002.hp1 NA19080.hp2 NA19081.hp1 NA19084.hp1 NA19240.hp2 NA20805.hp2	a0001 a0002 a0003 others(2): Show a0001 a0002 a0003 a0005 a0010	a0001c0001 a0001c0006 a0001c0007 others(8): Show a0001c0001 a0001c0006 a0001c0007 a0001c0018 a0001c0044 a0002c0002 a0003c0003 a0003c0008 a0003c0019 a0005c0025 a0010c0017	a0001c0001t0001 a0001c0001t0002 a0001c0001t0003 others(20): Show a0001c0001t0001 a0001c0001t0002 a0001c0001t0003 a0001c0001t0004 a0001c0001t0007 a0001c0001t0010 a0001c0001t0019 a0001c0001t0036 a0001c0001t0046 a0001c0006t0035 a0001c0007t0045 a0001c0018t0001 a0001c0044t0002 a0002c0002t0001 a0002c0002t0002 a0002c0002t0003 a0003c0003t0003 a0003c0003t0013 a0003c0003t0029 a0003c0008t0003 a0003c0019t0004 a0005c0025t0008 a0010c0017t0001	a0001c0001t0001g0023 a0001c0001t0001g0150 a0001c0001t0001g0194 others(37): Show a0001c0001t0001g0023 a0001c0001t0001g0150 a0001c0001t0001g0194 a0001c0001t0001g0254 a0001c0001t0001g0264 a0001c0001t0002g0022 a0001c0001t0002g0066 a0001c0001t0002g0088 a0001c0001t0002g0147 a0001c0001t0002g0229 a0001c0001t0002g0235 a0001c0001t0002g0239 a0001c0001t0002g0251 a0001c0001t0002g0277 a0001c0001t0003g0045 a0001c0001t0003g0211 a0001c0001t0003g0218 a0001c0001t0004g0170 a0001c0001t0007g0026 a0001c0001t0010g0303 a0001c0001t0019g0317 a0001c0001t0036g0334 a0001c0001t0046g0171 a0001c0006t0035g0075 a0001c0007t0045g0178 a0001c0018t0001g0310 a0001c0044t0002g0230 a0002c0002t0001g0196 a0002c0002t0002g0275 a0002c0002t0002g0276 a0002c0002t0003g0070 a0002c0002t0003g0096 a0002c0002t0003g0193 a0003c0003t0003g0312 a0003c0003t0013g0308 a0003c0003t0029g0121 a0003c0008t0003g0325 a0003c0019t0004g0187 a0005c0025t0008g0065 a0010c0017t0001g0287	40	338	0.1183	-8	c.139 others(25): Show c.139+1032_139+1039delTCTTTCTT		SGSM1	ENSG00000167037.19	transcript	ENST00000400358.9	protein_coding	3/24					INFO_REALIGN_3_PRIME	chr22	TogoVar
SGSM1_chr22_24801211_24932578	24851449	GGAGAGAG others(1): Show GGAGAGAGA	G G	intron_variant intron_variant	MODIFIER	HG00735.hp1 HG01952.hp1 HG02027.hp1 others(12): Show HG00735.hp1 HG01952.hp1 HG02027.hp1 HG02040.hp1 HG02056.hp2 HG02165.hp1 HG03669.hp1 HG04228.hp2 NA18950.hp1 NA18951.hp2 NA18954.hp2 NA18991.hp1 NA19005.hp2 NA19009.hp2 NA19081.hp2	a0001 a0002 a0001 a0002	a0001c0004 a0001c0006 a0001c0014 others(2): Show a0001c0004 a0001c0006 a0001c0014 a0002c0012 a0002c0015	a0001c0004t0001 a0001c0004t0002 a0001c0004t0004 others(8): Show a0001c0004t0001 a0001c0004t0002 a0001c0004t0004 a0001c0004t0005 a0001c0004t0006 a0001c0006t0001 a0001c0006t0007 a0001c0014t0002 a0001c0014t0037 a0002c0012t0003 a0002c0015t0002	a0001c0004t0001g0330 a0001c0004t0002g0111 a0001c0004t0002g0118 others(12): Show a0001c0004t0001g0330 a0001c0004t0002g0111 a0001c0004t0002g0118 a0001c0004t0002g0248 a0001c0004t0004g0182 a0001c0004t0005g0181 a0001c0004t0006g0149 a0001c0004t0006g0335 a0001c0006t0001g0199 a0001c0006t0007g0201 a0001c0014t0002g0148 a0001c0014t0037g0332 a0002c0012t0003g0221 a0002c0015t0002g0202 a0002c0015t0002g0268	15	338	0.0444	-8	c.455 others(25): Show c.455+1046_455+1053delGAGAGAGA		SGSM1	ENSG00000167037.19	transcript	ENST00000400358.9	protein_coding	5/24					INFO_REALIGN_3_PRIME	chr22	TogoVar
SGSM1_chr22_24801211_24932578	24853769	ATTTTTTT others(1): Show ATTTTTTTT	A A	intron_variant intron_variant	MODIFIER	HG01167.hp2 HG01169.hp1 HG02622.hp2 others(5): Show HG01167.hp2 HG01169.hp1 HG02622.hp2 HG02647.hp1 HG02723.hp1 HG02886.hp2 HG06807.hp1 NA19043.hp2	a0001 a0003 a0009 a0001 a0003 a0009	a0001c0007 a0003c0031 a0003c0035 others(1): Show a0001c0007 a0003c0031 a0003c0035 a0009c0032	a0001c0007t0001 a0001c0007t0015 a0001c0007t0045 others(3): Show a0001c0007t0001 a0001c0007t0015 a0001c0007t0045 a0003c0031t0031 a0003c0035t0001 a0009c0032t0022	a0001c0007t0001g0323 a0001c0007t0001g0324 a0001c0007t0001g0338 others(5): Show a0001c0007t0001g0323 a0001c0007t0001g0324 a0001c0007t0001g0338 a0001c0007t0015g0074 a0001c0007t0045g0178 a0003c0031t0031g0290 a0003c0035t0001g0192 a0009c0032t0022g0309	8	338	0.0237	-8	c.456 others(25): Show c.456-1213_456-1206delTTTTTTTT		SGSM1	ENSG00000167037.19	transcript	ENST00000400358.9	protein_coding	5/24					INFO_REALIGN_3_PRIME	chr22	TogoVar
SGSM1_chr22_24801211_24932578	24887107	TTGTGTGT others(1): Show TTGTGTGTG	T T	intron_variant intron_variant	MODIFIER	HG01167.hp2 HG01169.hp1 HG02145.hp1 others(7): Show HG01167.hp2 HG01169.hp1 HG02145.hp1 HG02615.hp2 HG02647.hp1 HG02723.hp1 HG03130.hp2 HG03225.hp2 HG03471.hp1 HG03471.hp2	a0001 a0003 a0001 a0003	a0001c0006 a0001c0007 a0001c0029 others(2): Show a0001c0006 a0001c0007 a0001c0029 a0003c0010 a0003c0022	a0001c0006t0001 a0001c0007t0001 a0001c0007t0045 others(4): Show a0001c0006t0001 a0001c0007t0001 a0001c0007t0045 a0001c0029t0001 a0003c0010t0001 a0003c0010t0003 a0003c0022t0002	a0001c0006t0001g0069 a0001c0007t0001g0323 a0001c0007t0001g0324 others(7): Show a0001c0006t0001g0069 a0001c0007t0001g0323 a0001c0007t0001g0324 a0001c0007t0001g0338 a0001c0007t0045g0178 a0001c0029t0001g0041 a0003c0010t0001g0067 a0003c0010t0001g0295 a0003c0010t0003g0017 a0003c0022t0002g0030	10	338	0.0296	-8	c.177 others(25): Show c.1770+403_1770+410delGTGTGTGT		SGSM1	ENSG00000167037.19	transcript	ENST00000400358.9	protein_coding	16/24					INFO_REALIGN_3_PRIME	chr22	TogoVar
SGSM1_chr22_24801211_24932578	24900340	CTTCTTTC others(1): Show CTTCTTTCT	C C	intron_variant intron_variant	MODIFIER	HG00639.hp2 HG00738.hp2 HG01099.hp1 others(32): Show HG00639.hp2 HG00738.hp2 HG01099.hp1 HG01358.hp1 HG02083.hp1 HG02083.hp2 HG02129.hp2 HG02135.hp1 HG02148.hp1 HG02148.hp2 HG02738.hp1 HG02886.hp1 HG03139.hp2 HG03516.hp2 HG03579.hp1 HG03669.hp1 HG03688.hp1 HG03942.hp2 HG04184.hp1 HG04184.hp2 HG04204.hp2 HG04228.hp2 NA18522.hp1 NA18949.hp1 NA18950.hp1 NA18989.hp2 NA19043.hp2 NA19060.hp2 NA19080.hp1 NA19090.hp2 NA19240.hp2 NA20300.hp1 NA20300.hp2 NA20905.hp2 homoSapiens_chm13v2.hp1	a0001 a0002 a0003 others(2): Show a0001 a0002 a0003 a0011 a0012	a0001c0001 a0001c0004 a0001c0006 others(6): Show a0001c0001 a0001c0004 a0001c0006 a0002c0002 a0002c0012 a0003c0003 a0003c0031 a0011c0043 a0012c0038	a0001c0001t0001 a0001c0001t0002 a0001c0001t0004 others(17): Show a0001c0001t0001 a0001c0001t0002 a0001c0001t0004 a0001c0001t0005 a0001c0001t0011 a0001c0001t0024 a0001c0001t0028 a0001c0004t0001 a0001c0004t0002 a0001c0006t0001 a0002c0002t0002 a0002c0002t0003 a0002c0002t0007 a0002c0012t0003 a0003c0003t0003 a0003c0003t0013 a0003c0003t0017 a0003c0031t0031 a0011c0043t0001 a0012c0038t0003	a0001c0001t0001g0020 a0001c0001t0001g0057 a0001c0001t0001g0102 others(32): Show a0001c0001t0001g0020 a0001c0001t0001g0057 a0001c0001t0001g0102 a0001c0001t0001g0245 a0001c0001t0001g0254 a0001c0001t0001g0256 a0001c0001t0001g0279 a0001c0001t0002g0077 a0001c0001t0002g0078 a0001c0001t0002g0094 a0001c0001t0002g0115 a0001c0001t0002g0132 a0001c0001t0002g0154 a0001c0001t0002g0222 a0001c0001t0002g0262 a0001c0001t0004g0180 a0001c0001t0005g0190 a0001c0001t0011g0223 a0001c0001t0011g0227 a0001c0001t0024g0319 a0001c0001t0028g0037 a0001c0004t0001g0330 a0001c0004t0002g0331 a0001c0006t0001g0199 a0002c0002t0002g0112 a0002c0002t0003g0096 a0002c0002t0003g0152 a0002c0002t0007g0156 a0002c0012t0003g0221 a0003c0003t0003g0312 a0003c0003t0013g0308 a0003c0003t0017g0044 a0003c0031t0031g0290 a0011c0043t0001g0289 a0012c0038t0003g0292	35	338	0.1036	-8	c.261 others(27): Show c.2611-1432_2611-1425delTTCTTTCT		SGSM1	ENSG00000167037.19	transcript	ENST00000400358.9	protein_coding	19/24					INFO_REALIGN_3_PRIME	chr22	TogoVar
SGSM1_chr22_24801211_24932578	24907259	TCAAATAA others(1): Show TCAAATAAA	T T	intron_variant intron_variant	MODIFIER	HG01109.hp2 HG02258.hp1 HG02970.hp2 others(5): Show HG01109.hp2 HG02258.hp1 HG02970.hp2 HG03130.hp2 HG03471.hp1 HG03471.hp2 HG03579.hp2 NA20129.hp1	a0001 a0003 a0001 a0003	a0001c0001 a0003c0003 a0003c0010 others(3): Show a0001c0001 a0003c0003 a0003c0010 a0003c0013 a0003c0022 a0003c0030	a0001c0001t0001 a0003c0003t0001 a0003c0003t0020 others(4): Show a0001c0001t0001 a0003c0003t0001 a0003c0003t0020 a0003c0010t0001 a0003c0013t0003 a0003c0022t0002 a0003c0030t0004	a0001c0001t0001g0315 a0003c0003t0001g0306 a0003c0003t0020g0071 others(5): Show a0001c0001t0001g0315 a0003c0003t0001g0306 a0003c0003t0020g0071 a0003c0010t0001g0067 a0003c0010t0001g0295 a0003c0013t0003g0040 a0003c0022t0002g0030 a0003c0030t0004g0188	8	338	0.0237	-8	c.281 others(27): Show c.2818+2073_2818+2080delCAAATAAA		SGSM1	ENSG00000167037.19	transcript	ENST00000400358.9	protein_coding	21/24						chr22	TogoVar
SGSM1_chr22_24801211_24932578	24907260	CAAATAAA others(1): Show CAAATAAAT	C C	intron_variant intron_variant	MODIFIER	HG00140.hp1 HG00140.hp2 HG00408.hp1 others(63): Show HG00140.hp1 HG00140.hp2 HG00408.hp1 HG00408.hp2 HG00544.hp2 HG00609.hp2 HG00673.hp1 HG00735.hp2 HG01243.hp2 HG01358.hp1 HG01515.hp2 HG02004.hp1 HG02040.hp1 HG02055.hp1 HG02080.hp2 HG02083.hp2 HG02129.hp1 HG02132.hp2 HG02135.hp1 HG02258.hp2 HG02486.hp1 HG02723.hp2 HG02735.hp1 HG02922.hp2 HG03017.hp2 HG03225.hp2 HG03453.hp1 HG03490.hp2 HG03492.hp2 HG03579.hp1 HG03669.hp1 HG03669.hp2 HG03688.hp2 HG03704.hp2 HG03710.hp2 HG03831.hp1 HG03831.hp2 HG03942.hp1 HG03942.hp2 HG04184.hp2 HG04199.hp1 HG04204.hp1 HG04204.hp2 HG04228.hp2 NA18522.hp1 NA18747.hp1 NA18747.hp2 NA18906.hp2 NA18941.hp2 NA18949.hp2 NA18951.hp2 NA18953.hp1 NA18954.hp1 NA18960.hp2 NA18986.hp1 NA18990.hp1 NA18990.hp2 NA18993.hp1 NA18995.hp1 NA19005.hp2 NA19043.hp1 NA19080.hp2 NA20752.hp1 NA20905.hp2 NA21309.hp1 NA21309.hp2	a0001 a0002 a0003 others(3): Show a0001 a0002 a0003 a0007 a0012 a0013	a0001c0001 a0001c0006 a0001c0014 others(11): Show a0001c0001 a0001c0006 a0001c0014 a0001c0018 a0001c0020 a0001c0044 a0002c0002 a0002c0012 a0002c0015 a0003c0003 a0003c0010 a0007c0036 a0012c0038 a0013c0026	a0001c0001t0001 a0001c0001t0002 a0001c0001t0003 others(24): Show a0001c0001t0001 a0001c0001t0002 a0001c0001t0003 a0001c0001t0005 a0001c0001t0032 a0001c0001t0038 a0001c0006t0001 a0001c0014t0037 a0001c0018t0001 a0001c0020t0010 a0001c0044t0002 a0002c0002t0001 a0002c0002t0002 a0002c0002t0003 a0002c0002t0007 a0002c0002t0012 a0002c0002t0014 a0002c0002t0018 a0002c0002t0023 a0002c0002t0027 a0002c0012t0003 a0002c0015t0002 a0003c0003t0001 a0003c0010t0003 a0007c0036t0039 a0012c0038t0003 a0013c0026t0004	a0001c0001t0001g0028 a0001c0001t0001g0053 a0001c0001t0001g0140 others(63): Show a0001c0001t0001g0028 a0001c0001t0001g0053 a0001c0001t0001g0140 a0001c0001t0001g0141 a0001c0001t0001g0142 a0001c0001t0001g0216 a0001c0001t0001g0242 a0001c0001t0001g0252 a0001c0001t0001g0256 a0001c0001t0001g0298 a0001c0001t0001g0314 a0001c0001t0002g0077 a0001c0001t0002g0078 a0001c0001t0002g0235 a0001c0001t0003g0021 a0001c0001t0003g0027 a0001c0001t0003g0241 a0001c0001t0003g0250 a0001c0001t0003g0258 a0001c0001t0003g0265 a0001c0001t0005g0190 a0001c0001t0032g0233 a0001c0001t0038g0231 a0001c0006t0001g0199 a0001c0014t0037g0332 a0001c0018t0001g0310 a0001c0020t0010g0336 a0001c0044t0002g0230 a0002c0002t0001g0329 a0002c0002t0002g0008 a0002c0002t0002g0112 a0002c0002t0002g0161 a0002c0002t0002g0220 a0002c0002t0002g0228 a0002c0002t0002g0249 a0002c0002t0002g0266 a0002c0002t0002g0267 a0002c0002t0002g0274 a0002c0002t0002g0275 a0002c0002t0002g0276 a0002c0002t0003g0034 a0002c0002t0003g0052 a0002c0002t0003g0070 a0002c0002t0003g0087 a0002c0002t0003g0096 a0002c0002t0003g0097 a0002c0002t0003g0101 a0002c0002t0003g0152 a0002c0002t0003g0193 a0002c0002t0003g0318 a0002c0002t0007g0090 a0002c0002t0007g0156 a0002c0002t0012g0321 a0002c0002t0014g0183 a0002c0002t0014g0186 a0002c0002t0018g0169 a0002c0002t0023g0212 a0002c0002t0027g0313 a0002c0012t0003g0221 a0002c0015t0002g0202 a0002c0015t0002g0268 a0003c0003t0001g0301 a0003c0010t0003g0017 a0007c0036t0039g0253 a0012c0038t0003g0292 a0013c0026t0004g0162	66	338	0.1953	-8	c.281 others(27): Show c.2818+2113_2818+2120delTAAATAAA		SGSM1	ENSG00000167037.19	transcript	ENST00000400358.9	protein_coding	21/24					INFO_REALIGN_3_PRIME	chr22	TogoVar
SGSM1_chr22_24801211_24932578	24928903	CAATAAAT others(1): Show CAATAAATA	C C	downstream_gene_variant downstream_gene_variant	MODIFIER	HG02647.hp1 HG03041.hp2 HG06807.hp1 HG02647.hp1 HG03041.hp2 HG06807.hp1	a0001 a0001	a0001c0005 a0001c0007 a0001c0005 a0001c0007	a0001c0005t0015 a0001c0007t0015 a0001c0007t0045 a0001c0005t0015 a0001c0007t0015 a0001c0007t0045	a0001c0005t0015g0120 a0001c0007t0015g0074 a0001c0007t0045g0178 a0001c0005t0015g0120 a0001c0007t0015g0074 a0001c0007t0045g0178	3	338	0.0089	-8	c.46 others(19): Show c.4630_*4637delAATAAATA		SGSM1	ENSG00000167037.19	transcript	ENST00000400358.9	protein_coding					1326		chr22	TogoVar
SGSM3_chr22_40365594_40415289	40413018	TCCCAGCT others(1): Show TCCCAGCTA	T T	downstream_gene_variant downstream_gene_variant	MODIFIER	HG01934.hp2 NA20129.hp2 NA20300.hp2 HG01934.hp2 NA20129.hp2 NA20300.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0078 a0001c0001t0001g0201 a0001c0001t0001g0237 a0001c0001t0001g0078 a0001c0001t0001g0201 a0001c0001t0001g0237	3	292	0.0103	-8	c.32 others(19): Show c.3260_*3267delCCCAGCTA		SGSM3	ENSG00000100359.21	transcript	ENST00000248929.14	protein_coding					2730		chr22	TogoVar
SGTA_chr19_2749715_2788273	2784758	CAAAAAAA others(1): Show CAAAAAAAA	C C	upstream_gene_variant upstream_gene_variant	MODIFIER	HG02145.hp1 HG02258.hp1 HG02486.hp2 others(6): Show HG02145.hp1 HG02258.hp1 HG02486.hp2 HG02559.hp1 HG02572.hp2 HG03139.hp2 HG03516.hp1 NA18981.hp2 NA19043.hp2	a0001 a0001	a0001c0004 a0001c0006 a0001c0009 a0001c0004 a0001c0006 a0001c0009	a0001c0004t0003 a0001c0006t0004 a0001c0009t0010 a0001c0004t0003 a0001c0006t0004 a0001c0009t0010	a0001c0004t0003g0145 a0001c0006t0004g0182 a0001c0006t0004g0183 others(6): Show a0001c0004t0003g0145 a0001c0006t0004g0182 a0001c0006t0004g0183 a0001c0006t0004g0184 a0001c0006t0004g0185 a0001c0006t0004g0186 a0001c0006t0004g0187 a0001c0009t0010g0179 a0001c0009t0010g0180	9	396	0.0227	-8	c.-15 others(19): Show c.-1557_-1550delTTTTTTTT		SGTA	ENSG00000104969.11	transcript	ENST00000221566.7	protein_coding					1486		chr19	TogoVar
SH2B2_chr7_102281868_102326711	102301559	CGTGTGTG others(1): Show CGTGTGTGT	C C	intron_variant intron_variant	MODIFIER	HG01106.hp1 HG02922.hp2 HG03098.hp1 others(2): Show HG01106.hp1 HG02922.hp2 HG03098.hp1 HG03453.hp2 HG03579.hp1	a0001 a0003 a0001 a0003	a0001c0001 a0003c0003 a0001c0001 a0003c0003	a0001c0001t0002 a0003c0003t0002 a0001c0001t0002 a0003c0003t0002	a0001c0001t0002g0389 a0001c0001t0002g0390 a0001c0001t0002g0391 others(2): Show a0001c0001t0002g0389 a0001c0001t0002g0390 a0001c0001t0002g0391 a0003c0003t0002g0388 a0003c0003t0002g0392	5	406	0.0123	-8	c.729 others(23): Show c.729+296_729+303delTGTGTGTG		SH2B2	ENSG00000160999.11	transcript	ENST00000444095.3	protein_coding	2/8					INFO_REALIGN_3_PRIME	chr7	TogoVar
SH2B2_chr7_102281868_102326711	102322686	CCCTTCCT others(1): Show CCCTTCCTT	C C	downstream_gene_variant downstream_gene_variant	MODIFIER	HG01891.hp1 HG01891.hp2 HG02723.hp2 others(7): Show HG01891.hp1 HG01891.hp2 HG02723.hp2 HG02818.hp2 HG02965.hp2 HG03041.hp1 HG03453.hp1 HG03486.hp2 HG03688.hp1 NA18906.hp1	a0001 a0002 a0004 others(1): Show a0001 a0002 a0004 a0005	a0001c0001 a0002c0002 a0004c0004 others(1): Show a0001c0001 a0002c0002 a0004c0004 a0005c0006	a0001c0001t0001 a0001c0001t0002 a0002c0002t0002 others(3): Show a0001c0001t0001 a0001c0001t0002 a0002c0002t0002 a0004c0004t0001 a0004c0004t0002 a0005c0006t0001	a0001c0001t0001g0249 a0001c0001t0001g0257 a0001c0001t0001g0337 others(7): Show a0001c0001t0001g0249 a0001c0001t0001g0257 a0001c0001t0001g0337 a0001c0001t0002g0387 a0002c0002t0002g0038 a0002c0002t0002g0380 a0004c0004t0001g0251 a0004c0004t0001g0258 a0004c0004t0002g0115 a0005c0006t0001g0252	10	406	0.0246	-8	c.10 others(19): Show c.1057_*1064delCCTTCCTT		SH2B2	ENSG00000160999.11	transcript	ENST00000444095.3	protein_coding					976		chr7	TogoVar
SH2B3_chr12_111400923_111456623	111427388	GAAAAAAA others(1): Show GAAAAAAAA	G G	intron_variant intron_variant	MODIFIER	HG00099.hp2 HG00408.hp1 HG00558.hp1 others(69): Show HG00099.hp2 HG00408.hp1 HG00558.hp1 HG00558.hp2 HG00597.hp2 HG00642.hp2 HG01243.hp2 HG02027.hp2 HG02040.hp1 HG02056.hp1 HG02071.hp1 HG02071.hp2 HG02074.hp2 HG02129.hp1 HG02132.hp2 HG02135.hp1 HG02145.hp2 HG02165.hp2 HG02257.hp2 HG02258.hp1 HG02523.hp1 HG02622.hp1 HG02683.hp1 HG02717.hp2 HG02809.hp1 HG02897.hp2 HG03041.hp2 HG03130.hp2 HG03195.hp1 HG03225.hp1 HG03490.hp1 HG03491.hp1 HG03492.hp2 HG03669.hp1 HG03927.hp2 HG04115.hp2 NA18612.hp1 NA18906.hp2 NA18945.hp1 NA18947.hp1 NA18949.hp1 NA18951.hp2 NA18960.hp1 NA18964.hp2 NA18968.hp2 NA18969.hp2 NA18973.hp1 NA18979.hp2 NA18982.hp2 NA18983.hp1 NA18989.hp2 NA18993.hp1 NA19000.hp1 NA19002.hp1 NA19012.hp2 NA19043.hp2 NA19055.hp2 NA19056.hp1 NA19057.hp1 NA19057.hp2 NA19058.hp1 NA19066.hp1 NA19070.hp1 NA19074.hp1 NA19081.hp1 NA19083.hp2 NA19084.hp2 NA19086.hp2 NA19088.hp2 NA19089.hp2 NA19091.hp1 NA20752.hp1	a0001 a0004 a0007 others(1): Show a0001 a0004 a0007 a0008	a0001c0001 a0001c0005 a0004c0004 others(2): Show a0001c0001 a0001c0005 a0004c0004 a0007c0007 a0008c0015	a0001c0001t0002 a0001c0001t0006 a0001c0001t0012 others(7): Show a0001c0001t0002 a0001c0001t0006 a0001c0001t0012 a0001c0001t0017 a0001c0001t0018 a0001c0001t0021 a0001c0005t0010 a0004c0004t0002 a0007c0007t0002 a0008c0015t0002	a0001c0001t0002g0002 a0001c0001t0002g0006 a0001c0001t0002g0007 others(58): Show a0001c0001t0002g0002 a0001c0001t0002g0006 a0001c0001t0002g0007 a0001c0001t0002g0017 a0001c0001t0002g0018 a0001c0001t0002g0019 a0001c0001t0002g0021 a0001c0001t0002g0031 a0001c0001t0002g0062 a0001c0001t0002g0123 a0001c0001t0002g0124 a0001c0001t0002g0126 a0001c0001t0002g0131 a0001c0001t0002g0132 a0001c0001t0002g0133 a0001c0001t0002g0134 a0001c0001t0002g0139 a0001c0001t0002g0140 a0001c0001t0002g0141 a0001c0001t0002g0142 a0001c0001t0002g0143 a0001c0001t0002g0148 a0001c0001t0002g0149 a0001c0001t0002g0150 a0001c0001t0002g0151 a0001c0001t0002g0155 a0001c0001t0002g0156 a0001c0001t0002g0157 a0001c0001t0002g0158 a0001c0001t0002g0159 a0001c0001t0002g0162 a0001c0001t0002g0163 a0001c0001t0002g0164 a0001c0001t0002g0166 a0001c0001t0002g0167 a0001c0001t0002g0170 a0001c0001t0002g0174 a0001c0001t0002g0175 a0001c0001t0002g0176 a0001c0001t0002g0177 a0001c0001t0002g0182 a0001c0001t0002g0183 a0001c0001t0002g0258 a0001c0001t0006g0242 a0001c0001t0012g0073 a0001c0001t0012g0077 a0001c0001t0017g0017 a0001c0001t0018g0181 a0001c0001t0021g0130 a0001c0005t0010g0178 a0001c0005t0010g0179 a0001c0005t0010g0180 a0004c0004t0002g0002 a0004c0004t0002g0020 a0004c0004t0002g0021 a0004c0004t0002g0125 a0004c0004t0002g0165 a0004c0004t0002g0173 a0007c0007t0002g0007 a0007c0007t0002g0147 a0008c0015t0002g0128	72	326	0.2209	-8	c.732 others(25): Show c.732+8534_732+8541delAAAAAAAA		SH2B3	ENSG00000111252.11	transcript	ENST00000341259.7	protein_coding	2/7					INFO_REALIGN_3_PRIME	chr12	TogoVar
SH2D1A_chrX_124341563_124378160	124350702	ATAATATA others(1): Show ATAATATAT	A A	intron_variant intron_variant	MODIFIER	HG03490.hp1 HG03490.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0002 a0001c0001t0002	a0001c0001t0002g0245 a0001c0001t0002g0245	1	318	0.0031	-8	c.137 others(25): Show c.137+3926_137+3933delATATATTA		SH2D1A	ENSG00000183918.18	transcript	ENST00000371139.9	protein_coding	1/3					INFO_REALIGN_3_PRIME	chrX	TogoVar
SH2D1A_chrX_124341563_124378160	124365804	ACAGGTTC others(1): Show ACAGGTTCT	A A	frameshift_variant frameshift_variant	HIGH	HG01517.hp2 HG01517.hp2	a0003 a0003	a0003c0002 a0003c0002	a0003c0002t0001 a0003c0002t0001	a0003c0002t0001g0094 a0003c0002t0001g0094	1	318	0.0031	-8	c.182 others(15): Show c.182_189delCAGGTTCT	p.Thr others(4): Show p.Thr61fs	SH2D1A	ENSG00000183918.18	transcript	ENST00000371139.9	protein_coding	2/4	262/2236	182/387	61/128			chrX	TogoVar
SH2D1A_chrX_124341563_124378160	124366876	AACACACA others(1): Show AACACACAC	A A	intron_variant intron_variant	MODIFIER	HG01243.hp1 HG02615.hp1 HG02886.hp2 others(11): Show HG01243.hp1 HG02615.hp1 HG02886.hp2 HG02896.hp1 HG02922.hp2 HG02970.hp2 HG03195.hp1 HG03453.hp1 HG03486.hp2 HG03516.hp1 HG03540.hp1 NA18906.hp2 NA18948.hp1 NA19240.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0003 a0001c0001t0001 a0001c0001t0003	a0001c0001t0001g0106 a0001c0001t0001g0107 a0001c0001t0001g0109 others(11): Show a0001c0001t0001g0106 a0001c0001t0001g0107 a0001c0001t0001g0109 a0001c0001t0001g0117 a0001c0001t0001g0119 a0001c0001t0001g0250 a0001c0001t0003g0035 a0001c0001t0003g0038 a0001c0001t0003g0127 a0001c0001t0003g0136 a0001c0001t0003g0137 a0001c0001t0003g0138 a0001c0001t0003g0140 a0001c0001t0003g0241	14	318	0.0440	-8	c.201 others(25): Show c.201+1089_201+1096delACACACAC		SH2D1A	ENSG00000183918.18	transcript	ENST00000371139.9	protein_coding	2/3					INFO_REALIGN_3_PRIME	chrX	TogoVar
SH2D1A_chrX_124341563_124378160	124375142	ACTCTCTC others(1): Show ACTCTCTCT	A A	downstream_gene_variant downstream_gene_variant	MODIFIER	HG02615.hp2 HG02896.hp2 HG02897.hp1 HG02615.hp2 HG02896.hp2 HG02897.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0004 a0001c0001t0001 a0001c0001t0004	a0001c0001t0001g0086 a0001c0001t0004g0001 a0001c0001t0001g0086 a0001c0001t0004g0001	3	318	0.0094	-8	c.37 others(19): Show c.3752_*3759delCTCTCTCT		SH2D1A	ENSG00000183918.18	transcript	ENST00000371139.9	protein_coding					1983		chrX	TogoVar
SH2D1A_chrX_124341563_124378160	124375171	CTCTCTCT others(1): Show CTCTCTCTA	C C	downstream_gene_variant downstream_gene_variant	MODIFIER	HG02280.hp2 NA20129.hp2 HG02280.hp2 NA20129.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0033 a0001c0001t0001g0039 a0001c0001t0001g0033 a0001c0001t0001g0039	2	318	0.0063	-8	c.37 others(19): Show c.3781_*3788delTCTCTCTA		SH2D1A	ENSG00000183918.18	transcript	ENST00000371139.9	protein_coding					2012		chrX	TogoVar
SH2D1A_chrX_124341563_124378160	124375173	CTCTCTAT others(1): Show CTCTCTATA	C C	downstream_gene_variant downstream_gene_variant	MODIFIER	HG04115.hp1 HG04115.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0280 a0001c0001t0001g0280	1	318	0.0031	-8	c.37 others(19): Show c.3783_*3790delTCTCTATA		SH2D1A	ENSG00000183918.18	transcript	ENST00000371139.9	protein_coding					2014		chrX	TogoVar
SH2D1B_chr1_162390268_162417136	162392171	AAAGGAAG others(1): Show AAAGGAAGG	A A	downstream_gene_variant downstream_gene_variant	MODIFIER	HG00323.hp1 HG00558.hp2 HG00639.hp1 others(31): Show HG00323.hp1 HG00558.hp2 HG00639.hp1 HG01070.hp2 HG01175.hp2 HG01257.hp1 HG01884.hp2 HG02071.hp1 HG02083.hp1 HG02738.hp2 HG03195.hp2 HG03491.hp2 HG03492.hp2 HG03710.hp1 HG03831.hp1 HG04204.hp1 NA18950.hp1 NA18953.hp2 NA18955.hp2 NA18960.hp1 NA18979.hp1 NA18986.hp1 NA19004.hp2 NA19005.hp1 NA19043.hp2 NA19056.hp2 NA19066.hp2 NA19074.hp1 NA19078.hp1 NA19086.hp2 NA20129.hp1 NA20752.hp1 NA20905.hp1 homoSapiens_chm13v2.hp1	a0001 a0002 a0001 a0002	a0001c0001 a0002c0002 a0001c0001 a0002c0002	a0001c0001t0001 a0001c0001t0003 a0001c0001t0005 others(4): Show a0001c0001t0001 a0001c0001t0003 a0001c0001t0005 a0001c0001t0010 a0001c0001t0011 a0001c0001t0014 a0002c0002t0001	a0001c0001t0001g0257 a0001c0001t0003g0013 a0001c0001t0003g0014 others(26): Show a0001c0001t0001g0257 a0001c0001t0003g0013 a0001c0001t0003g0014 a0001c0001t0003g0027 a0001c0001t0003g0029 a0001c0001t0003g0049 a0001c0001t0003g0051 a0001c0001t0003g0053 a0001c0001t0003g0055 a0001c0001t0003g0057 a0001c0001t0003g0059 a0001c0001t0003g0061 a0001c0001t0003g0066 a0001c0001t0003g0068 a0001c0001t0003g0074 a0001c0001t0003g0075 a0001c0001t0003g0081 a0001c0001t0003g0083 a0001c0001t0003g0084 a0001c0001t0003g0085 a0001c0001t0003g0086 a0001c0001t0003g0091 a0001c0001t0003g0093 a0001c0001t0003g0099 a0001c0001t0005g0142 a0001c0001t0010g0078 a0001c0001t0011g0052 a0001c0001t0014g0089 a0002c0002t0001g0154	34	424	0.0802	-8	c.51 others(19): Show c.5101_*5108delCCTTCCTT		SH2D1B	ENSG00000198574.6	transcript	ENST00000367929.3	protein_coding					3096		chr1	TogoVar
SH2D1B_chr1_162390268_162417136	162392527	CTCATTCA others(1): Show CTCATTCAT	C C	downstream_gene_variant downstream_gene_variant	MODIFIER	HG00544.hp1 HG01496.hp2 HG01516.hp2 others(20): Show HG00544.hp1 HG01496.hp2 HG01516.hp2 HG02129.hp2 NA18941.hp2 NA18956.hp1 NA18970.hp2 NA18971.hp2 NA18980.hp1 NA18991.hp2 NA18993.hp1 NA18995.hp2 NA19004.hp1 NA19012.hp2 NA19055.hp2 NA19066.hp1 NA19068.hp1 NA19074.hp2 NA19079.hp2 NA19084.hp2 NA19085.hp1 NA19087.hp2 homoSapiens_chm13v2.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0003 a0001c0001t0001 a0001c0001t0003	a0001c0001t0001g0002 a0001c0001t0001g0044 a0001c0001t0001g0045 others(13): Show a0001c0001t0001g0002 a0001c0001t0001g0044 a0001c0001t0001g0045 a0001c0001t0001g0186 a0001c0001t0001g0217 a0001c0001t0001g0219 a0001c0001t0001g0220 a0001c0001t0001g0221 a0001c0001t0001g0223 a0001c0001t0001g0224 a0001c0001t0001g0230 a0001c0001t0001g0234 a0001c0001t0001g0247 a0001c0001t0003g0014 a0001c0001t0003g0091 a0001c0001t0003g0092	23	424	0.0543	-8	c.47 others(19): Show c.4745_*4752delATGAATGA		SH2D1B	ENSG00000198574.6	transcript	ENST00000367929.3	protein_coding					2740		chr1	TogoVar
SH2D1B_chr1_162390268_162417136	162403509	AAAATATA others(1): Show AAAATATAT	A A	intron_variant intron_variant	MODIFIER	HG00438.hp1 HG00673.hp2 HG02280.hp1 others(9): Show HG00438.hp1 HG00673.hp2 HG02280.hp1 NA18945.hp2 NA18955.hp1 NA18981.hp2 NA18984.hp1 NA19043.hp2 NA19067.hp2 NA19074.hp2 NA19080.hp2 NA19086.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0003 a0001c0001t0001 a0001c0001t0003	a0001c0001t0001g0009 a0001c0001t0001g0045 a0001c0001t0001g0198 others(5): Show a0001c0001t0001g0009 a0001c0001t0001g0045 a0001c0001t0001g0198 a0001c0001t0001g0203 a0001c0001t0001g0237 a0001c0001t0001g0254 a0001c0001t0001g0276 a0001c0001t0003g0053	12	424	0.0283	-8	c.135 others(23): Show c.135-715_135-708delATATATTT		SH2D1B	ENSG00000198574.6	transcript	ENST00000367929.3	protein_coding	1/3						chr1	TogoVar
SH2D1B_chr1_162390268_162417136	162403701	TACACACA others(1): Show TACACACAC	T T	intron_variant intron_variant	MODIFIER	HG01169.hp1 HG02015.hp2 HG02132.hp1 others(5): Show HG01169.hp1 HG02015.hp2 HG02132.hp1 HG03486.hp2 NA18522.hp2 NA18952.hp1 NA18997.hp1 NA21309.hp2	a0001 a0002 a0003 a0001 a0002 a0003	a0001c0001 a0002c0002 a0003c0003 a0001c0001 a0002c0002 a0003c0003	a0001c0001t0001 a0001c0001t0002 a0001c0001t0018 others(2): Show a0001c0001t0001 a0001c0001t0002 a0001c0001t0018 a0002c0002t0001 a0003c0003t0004	a0001c0001t0001g0201 a0001c0001t0001g0267 a0001c0001t0001g0268 others(5): Show a0001c0001t0001g0201 a0001c0001t0001g0267 a0001c0001t0001g0268 a0001c0001t0002g0113 a0001c0001t0002g0116 a0001c0001t0018g0115 a0002c0002t0001g0153 a0003c0003t0004g0104	8	424	0.0189	-8	c.135 others(23): Show c.135-907_135-900delGTGTGTGT		SH2D1B	ENSG00000198574.6	transcript	ENST00000367929.3	protein_coding	1/3						chr1	TogoVar
SH2D3A_chr19_6747160_6772435	6771788	AAAGAAAG others(1): Show AAAGAAAGG	A A	upstream_gene_variant upstream_gene_variant	MODIFIER	HG00099.hp2 HG01515.hp1 HG02148.hp2 others(7): Show HG00099.hp2 HG01515.hp1 HG02148.hp2 HG03490.hp2 HG03492.hp1 HG03704.hp2 HG03942.hp2 HG04115.hp1 NA18954.hp1 NA20905.hp2	a0001 a0002 a0001 a0002	a0001c0001 a0002c0003 a0001c0001 a0002c0003	a0001c0001t0001 a0002c0003t0001 a0001c0001t0001 a0002c0003t0001	a0001c0001t0001g0013 a0001c0001t0001g0054 a0002c0003t0001g0011 others(3): Show a0001c0001t0001g0013 a0001c0001t0001g0054 a0002c0003t0001g0011 a0002c0003t0001g0012 a0002c0003t0001g0160 a0002c0003t0001g0196	10	380	0.0263	-8	c.-44 others(19): Show c.-4478_-4471delCCTTTCTT		SH2D3A	ENSG00000125731.13	transcript	ENST00000245908.11	protein_coding					4354		chr19	TogoVar
SH2D3A_chr19_6747160_6772435	6771792	AAAGGAAG others(1): Show AAAGGAAGG	A A	upstream_gene_variant upstream_gene_variant	MODIFIER	HG01891.hp2 HG01934.hp1 HG02055.hp2 others(18): Show HG01891.hp2 HG01934.hp1 HG02055.hp2 HG02572.hp2 HG02717.hp1 HG02886.hp2 HG02965.hp2 HG03041.hp1 HG03098.hp1 HG03130.hp2 HG03195.hp1 HG03486.hp2 HG03516.hp2 HG04115.hp2 HG06807.hp2 NA18522.hp1 NA18522.hp2 NA19030.hp2 NA19240.hp2 NA20300.hp2 NA21309.hp1	a0001 a0002 a0004 others(1): Show a0001 a0002 a0004 a0006	a0001c0001 a0001c0002 a0001c0009 others(4): Show a0001c0001 a0001c0002 a0001c0009 a0002c0003 a0002c0005 a0004c0006 a0006c0008	a0001c0001t0001 a0001c0002t0002 a0001c0009t0002 others(4): Show a0001c0001t0001 a0001c0002t0002 a0001c0009t0002 a0002c0003t0002 a0002c0005t0001 a0004c0006t0001 a0006c0008t0001	a0001c0001t0001g0032 a0001c0001t0001g0120 a0001c0002t0002g0084 others(14): Show a0001c0001t0001g0032 a0001c0001t0001g0120 a0001c0002t0002g0084 a0001c0009t0002g0175 a0002c0003t0002g0041 a0002c0003t0002g0186 a0002c0005t0001g0040 a0002c0005t0001g0177 a0002c0005t0001g0185 a0004c0006t0001g0025 a0004c0006t0001g0152 a0004c0006t0001g0153 a0004c0006t0001g0154 a0004c0006t0001g0155 a0004c0006t0001g0156 a0004c0006t0001g0157 a0006c0008t0001g0123	21	380	0.0553	-8	c.-44 others(19): Show c.-4482_-4475delCCTTCCTT		SH2D3A	ENSG00000125731.13	transcript	ENST00000245908.11	protein_coding					4358		chr19	TogoVar

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