view | regionname | pos | ref | alt | annotation | impact | samples | ahapids | chapids | thapids | thapids | ac | an | af | len | hgvs_c | hgvs_p | genename | geneid | featuretype | featureid | transcript_biotype | rank | cdna cdna pos length
|
cds cds pos length
|
aa aa pos length
|
distance | status | chr | external |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
SNX29_chr16_11971734_12579287 | 12047651 | CTTTTTTT others(1): Show |
C | intron_variant | MODIFIER | HG00280.hp1 HG00323.hp1 HG00639.hp1 others(44): Show |
a0001a0002a0003others(1): Show | a0001c0001a0001c0002a0001c0003others(11): Show | a0001c0001t0001a0001c0001t0009a0001c0001t0011others(40): Show | a0001c0001t0001g0108 a0001c0001t0001g0112 a0001c0001t0009g0090 others(44): Show |
47 | 176 | 0.2671 | -8 | c.500 others(23): Show |
SNX29 | ENSG00000048471.14 | transcript | ENST00000566228.6 | protein_coding | 6/20 | INFO_REALIGN_3_PRIME | chr16 | TogoVar | ||||||
SNX29_chr16_11971734_12579287 | 12066980 | AAAATAAA others(1): Show |
A | intron_variant | MODIFIER | HG00738.hp1 HG00741.hp2 HG01074.hp1 others(38): Show |
a0001a0002a0007 | a0001c0001a0001c0002a0001c0003others(6): Show | a0001c0001t0001a0001c0001t0002a0001c0001t0008others(33): Show | a0001c0001t0001g0108 a0001c0001t0002g0065 a0001c0001t0008g0104 others(38): Show |
41 | 176 | 0.2330 | -8 | c.124 others(27): Show |
SNX29 | ENSG00000048471.14 | transcript | ENST00000566228.6 | protein_coding | 9/20 | INFO_REALIGN_3_PRIME | chr16 | TogoVar | ||||||
SNX29_chr16_11971734_12579287 | 12077386 | GGTGTGTG others(1): Show |
G | intron_variant | MODIFIER | HG02486.hp1 NA19070.hp1 |
a0001a0006 | a0001c0001a0006c0017 | a0001c0001t0007a0006c0017t0002 | a0001c0001t0007g0175 a0006c0017t0002g0024 |
2 | 176 | 0.0114 | -8 | c.132 others(27): Show |
SNX29 | ENSG00000048471.14 | transcript | ENST00000566228.6 | protein_coding | 10/20 | INFO_REALIGN_3_PRIME | chr16 | TogoVar | ||||||
SNX29_chr16_11971734_12579287 | 12081688 | AAAAAAAA others(1): Show |
A | intron_variant | MODIFIER | HG00438.hp1 HG00558.hp1 HG00558.hp2 others(45): Show |
a0001a0004a0007 | a0001c0001a0001c0002a0001c0006others(3): Show | a0001c0001t0002a0001c0001t0004a0001c0001t0006others(40): Show | a0001c0001t0002g0065 a0001c0001t0002g0169 a0001c0001t0004g0078 others(45): Show |
48 | 176 | 0.2727 | -8 | c.140 others(27): Show |
SNX29 | ENSG00000048471.14 | transcript | ENST00000566228.6 | protein_coding | 11/20 | INFO_REALIGN_3_PRIME | chr16 | TogoVar | ||||||
SNX29_chr16_11971734_12579287 | 12091031 | AAAAAAAA others(1): Show |
A | intron_variant | MODIFIER | HG00639.hp1 HG01109.hp1 HG01261.hp2 others(12): Show |
a0001a0005 | a0001c0001a0001c0002a0001c0006others(3): Show | a0001c0001t0001a0001c0001t0002a0001c0001t0012others(12): Show | a0001c0001t0001g0112 a0001c0001t0002g0081 a0001c0001t0012g0056 others(12): Show |
15 | 176 | 0.0852 | -8 | c.140 others(29): Show |
SNX29 | ENSG00000048471.14 | transcript | ENST00000566228.6 | protein_coding | 11/20 | INFO_REALIGN_3_PRIME | chr16 | TogoVar | ||||||
SNX29_chr16_11971734_12579287 | 12105203 | TCCTCCCT others(1): Show |
T | intron_variant | MODIFIER | HG00140.hp2 HG00280.hp2 HG00738.hp1 others(23): Show |
a0001a0002a0008 | a0001c0001a0001c0002a0001c0003others(6): Show | a0001c0001t0001a0001c0001t0004a0001c0001t0048others(18): Show | a0001c0001t0001g0163 a0001c0001t0004g0078 a0001c0001t0048g0052 others(23): Show |
26 | 176 | 0.1477 | -8 | c.140 others(29): Show |
SNX29 | ENSG00000048471.14 | transcript | ENST00000566228.6 | protein_coding | 11/20 | INFO_REALIGN_3_PRIME | chr16 | TogoVar | ||||||
SNX29_chr16_11971734_12579287 | 12220324 | AAGGGAGG others(1): Show |
A | intron_variant | MODIFIER | HG01884.hp2 HG02486.hp1 HG02615.hp2 others(8): Show |
a0001a0006 | a0001c0001a0001c0002a0001c0003others(4): Show | a0001c0001t0002a0001c0001t0006a0001c0001t0012others(8): Show | a0001c0001t0002g0169 a0001c0001t0006g0064 a0001c0001t0012g0009 others(8): Show |
11 | 176 | 0.0625 | -8 | c.167 others(29): Show |
SNX29 | ENSG00000048471.14 | transcript | ENST00000566228.6 | protein_coding | 14/20 | INFO_REALIGN_3_PRIME | chr16 | TogoVar | ||||||
SNX29_chr16_11971734_12579287 | 12322876 | TGGAGTCA others(1): Show |
T | intron_variant | MODIFIER | HG01167.hp2 HG01884.hp1 HG01884.hp2 others(13): Show |
a0001 | a0001c0001a0001c0002a0001c0003others(3): Show | a0001c0001t0002a0001c0001t0013a0001c0001t0028others(12): Show | a0001c0001t0002g0065 a0001c0001t0013g0016 a0001c0001t0013g0150 others(13): Show |
16 | 176 | 0.0909 | -8 | c.178 others(29): Show |
SNX29 | ENSG00000048471.14 | transcript | ENST00000566228.6 | protein_coding | 15/20 | chr16 | TogoVar | |||||||
SNX29_chr16_11971734_12579287 | 12380657 | TCCACCCA others(1): Show |
T | intron_variant | MODIFIER | HG01167.hp2 HG01496.hp2 HG01891.hp2 others(17): Show |
a0001a0005a0008 | a0001c0001a0001c0002a0001c0003others(5): Show | a0001c0001t0006a0001c0001t0007a0001c0001t0012others(16): Show | a0001c0001t0006g0064 a0001c0001t0007g0008 a0001c0001t0012g0009 others(17): Show |
20 | 176 | 0.1136 | -8 | c.190 others(29): Show |
SNX29 | ENSG00000048471.14 | transcript | ENST00000566228.6 | protein_coding | 16/20 | INFO_REALIGN_3_PRIME | chr16 | TogoVar | ||||||
SNX29_chr16_11971734_12579287 | 12380776 | TCCATCCA others(1): Show |
T | intron_variant | MODIFIER | HG02895.hp2 HG03209.hp2 NA19240.hp2 |
a0001 | a0001c0002a0001c0006a0001c0007 | a0001c0002t0077a0001c0006t0068a0001c0007t0002 | a0001c0002t0077g0120 a0001c0006t0068g0003 a0001c0007t0002g0004 |
3 | 176 | 0.0171 | -8 | c.190 others(29): Show |
SNX29 | ENSG00000048471.14 | transcript | ENST00000566228.6 | protein_coding | 16/20 | INFO_REALIGN_3_PRIME | chr16 | TogoVar | ||||||
SNX29_chr16_11971734_12579287 | 12403194 | GTGTGTGT others(1): Show |
G | intron_variant | MODIFIER | HG00733.hp2 HG02451.hp2 HG02523.hp1 others(3): Show |
a0001a0003a0008 | a0001c0003a0001c0004a0001c0006others(2): Show | a0001c0003t0103a0001c0003t0104a0001c0004t0080others(3): Show | a0001c0003t0103g0079 a0001c0003t0104g0156 a0001c0004t0080g0054 others(3): Show |
6 | 176 | 0.0341 | -8 | c.195 others(25): Show |
SNX29 | ENSG00000048471.14 | transcript | ENST00000566228.6 | protein_coding | 17/20 | INFO_REALIGN_3_PRIME | chr16 | TogoVar | ||||||
SNX29_chr16_11971734_12579287 | 12403202 | ATGTGTGT others(1): Show |
A | intron_variant | MODIFIER | HG00738.hp1 HG00741.hp2 HG01099.hp1 others(3): Show |
a0001 | a0001c0001a0001c0003a0001c0004 | a0001c0001t0008a0001c0003t0002a0001c0003t0011others(2): Show | a0001c0001t0008g0137 a0001c0003t0002g0077 a0001c0003t0002g0097 others(3): Show |
6 | 176 | 0.0341 | -8 | c.195 others(25): Show |
SNX29 | ENSG00000048471.14 | transcript | ENST00000566228.6 | protein_coding | 17/20 | INFO_REALIGN_3_PRIME | chr16 | TogoVar | ||||||
SNX29_chr16_11971734_12579287 | 12433643 | AAAAAAAA others(1): Show |
A | intron_variant | MODIFIER | HG01109.hp1 HG01261.hp2 HG02257.hp2 others(5): Show |
a0001 | a0001c0001a0001c0002a0001c0013 | a0001c0001t0052a0001c0001t0055a0001c0002t0019others(4): Show | a0001c0001t0052g0026 a0001c0001t0055g0121 a0001c0002t0019g0174 others(5): Show |
8 | 176 | 0.0455 | -8 | c.203 others(29): Show |
SNX29 | ENSG00000048471.14 | transcript | ENST00000566228.6 | protein_coding | 18/20 | chr16 | TogoVar | |||||||
SNX29_chr16_11971734_12579287 | 12476413 | CATATATA others(1): Show |
C | intron_variant | MODIFIER | HG02109.hp1 HG02622.hp2 HG06807.hp1 others(2): Show |
a0001 | a0001c0001a0001c0002a0001c0003others(1): Show | a0001c0001t0034a0001c0002t0106a0001c0003t0002others(2): Show | a0001c0001t0034g0063 a0001c0002t0106g0123 a0001c0003t0002g0119 others(2): Show |
5 | 176 | 0.0284 | -8 | c.203 others(27): Show |
SNX29 | ENSG00000048471.14 | transcript | ENST00000566228.6 | protein_coding | 18/20 | INFO_REALIGN_3_PRIME | chr16 | TogoVar | ||||||
SNX29_chr16_11971734_12579287 | 12481461 | TATATACA others(1): Show |
T | intron_variant | MODIFIER | HG00280.hp1 HG02258.hp2 HG03834.hp2 |
a0001 | a0001c0001a0001c0003a0001c0007 | a0001c0001t0001a0001c0003t0057a0001c0007t0064 | a0001c0001t0001g0153 a0001c0003t0057g0105 a0001c0007t0064g0113 |
3 | 176 | 0.0171 | -8 | c.217 others(27): Show |
SNX29 | ENSG00000048471.14 | transcript | ENST00000566228.6 | protein_coding | 19/20 | INFO_REALIGN_3_PRIME | chr16 | TogoVar | ||||||
SNX29_chr16_11971734_12579287 | 12481513 | GACACACA others(1): Show |
G | intron_variant | MODIFIER | HG02257.hp1 HG02486.hp2 HG02896.hp1 others(2): Show |
a0001a0005 | a0001c0001a0001c0004a0005c0019 | a0001c0001t0001a0001c0001t0028a0001c0004t0020others(1): Show | a0001c0001t0001g0163 a0001c0001t0028g0122 a0001c0004t0020g0038 others(2): Show |
5 | 176 | 0.0284 | -8 | c.217 others(27): Show |
SNX29 | ENSG00000048471.14 | transcript | ENST00000566228.6 | protein_coding | 19/20 | INFO_REALIGN_3_PRIME | chr16 | TogoVar | ||||||
SNX29_chr16_11971734_12579287 | 12512367 | AAAATATA others(1): Show |
A | intron_variant | MODIFIER | HG01993.hp1 HG03098.hp1 HG03471.hp2 |
a0001 | a0001c0001a0001c0002a0001c0025 | a0001c0001t0048a0001c0002t0093a0001c0025t0096 | a0001c0001t0048g0052 a0001c0002t0093g0086 a0001c0025t0096g0076 |
3 | 176 | 0.0171 | -8 | c.217 others(29): Show |
SNX29 | ENSG00000048471.14 | transcript | ENST00000566228.6 | protein_coding | 19/20 | INFO_REALIGN_3_PRIME | chr16 | TogoVar | ||||||
SNX29_chr16_11971734_12579287 | 12512369 | AATATATA others(1): Show |
A | intron_variant | MODIFIER | HG00673.hp1 HG00738.hp1 HG00741.hp2 others(8): Show |
a0001 | a0001c0001a0001c0002a0001c0003others(1): Show | a0001c0001t0004a0001c0001t0011a0001c0001t0014others(7): Show | a0001c0001t0004g0078 a0001c0001t0011g0095 a0001c0001t0014g0099 others(8): Show |
11 | 176 | 0.0625 | -8 | c.217 others(29): Show |
SNX29 | ENSG00000048471.14 | transcript | ENST00000566228.6 | protein_coding | 19/20 | INFO_REALIGN_3_PRIME | chr16 | TogoVar | ||||||
SNX29_chr16_11971734_12579287 | 12536987 | TAAAATAA others(1): Show |
T | intron_variant | MODIFIER | HG00140.hp1 HG00738.hp2 HG00741.hp1 others(8): Show |
a0001 | a0001c0001a0001c0002a0001c0003 | a0001c0001t0001a0001c0001t0004a0001c0001t0052others(6): Show | a0001c0001t0001g0127 a0001c0001t0004g0078 a0001c0001t0004g0132 others(8): Show |
11 | 176 | 0.0625 | -8 | c.231 others(29): Show |
SNX29 | ENSG00000048471.14 | transcript | ENST00000566228.6 | protein_coding | 20/20 | INFO_REALIGN_3_PRIME | chr16 | TogoVar | ||||||
SNX29_chr16_11971734_12579287 | 12555394 | TCTGCTGG others(1): Show |
T | intron_variant | MODIFIER | HG02896.hp2 HG03579.hp1 |
a0001a0007 | a0001c0002a0007c0016 | a0001c0002t0109a0007c0016t0108 | a0001c0002t0109g0036 a0007c0016t0108g0049 |
2 | 176 | 0.0114 | -8 | c.231 others(29): Show |
SNX29 | ENSG00000048471.14 | transcript | ENST00000566228.6 | protein_coding | 20/20 | INFO_REALIGN_3_PRIME | chr16 | TogoVar | ||||||
SNX29_chr16_11971734_12579287 | 12564934 | TAAAAAAA others(1): Show |
T | intron_variant | MODIFIER | HG00733.hp2 HG02015.hp1 HG02451.hp2 others(10): Show |
a0001a0003 | a0001c0002a0001c0004a0001c0006others(3): Show | a0001c0002t0087a0001c0004t0020a0001c0004t0021others(9): Show | a0001c0002t0087g0147 a0001c0004t0020g0038 a0001c0004t0020g0055 others(10): Show |
13 | 176 | 0.0739 | -8 | c.231 others(27): Show |
SNX29 | ENSG00000048471.14 | transcript | ENST00000566228.6 | protein_coding | 20/20 | INFO_REALIGN_3_PRIME | chr16 | TogoVar | ||||||
SNX29_chr16_11971734_12579287 | 12575863 | GTTTTTAT others(1): Show |
G | downstream_gene_variant | MODIFIER | HG01261.hp1 HG01358.hp2 HG03710.hp1 others(5): Show |
a0001 | a0001c0002a0001c0004 | a0001c0002t0003a0001c0002t0005a0001c0002t0073others(3): Show | a0001c0002t0003g0134 a0001c0002t0003g0152 a0001c0002t0005g0002 others(5): Show |
8 | 176 | 0.0455 | -8 | c.*72 others(19): Show |
SNX29 | ENSG00000048471.14 | transcript | ENST00000566228.6 | protein_coding | 1577 | chr16 | TogoVar | |||||||
SNX29_chr16_11971734_12579287 | 12576185 | CAGTTTTT others(1): Show |
C | downstream_gene_variant | MODIFIER | HG01261.hp2 HG02258.hp1 NA18906.hp1 |
a0001 | a0001c0002 | a0001c0002t0024a0001c0002t0107 | a0001c0002t0024g0050 a0001c0002t0024g0128 a0001c0002t0107g0069 |
3 | 176 | 0.0171 | -8 | c.*75 others(19): Show |
SNX29 | ENSG00000048471.14 | transcript | ENST00000566228.6 | protein_coding | 1899 | chr16 | TogoVar | |||||||
SNX29_chr16_11971734_12579287 | 12577402 | TACACACA others(1): Show |
T | downstream_gene_variant | MODIFIER | HG00558.hp2 HG00733.hp1 HG00733.hp2 others(34): Show |
a0001a0002a0003others(2): Show | a0001c0001a0001c0002a0001c0003others(10): Show | a0001c0001t0002a0001c0001t0013a0001c0001t0017others(26): Show | a0001c0001t0002g0081 a0001c0001t0013g0016 a0001c0001t0013g0150 others(34): Show |
37 | 176 | 0.2102 | -8 | c.*87 others(19): Show |
SNX29 | ENSG00000048471.14 | transcript | ENST00000566228.6 | protein_coding | 3116 | chr16 | TogoVar | |||||||
SNX2_chr5_122770080_122839543 | 122789456 | CACACACA others(1): Show |
C | intron_variant | MODIFIER | HG01243.hp2 HG02559.hp2 HG02818.hp2 others(2): Show |
a0001 | a0001c0001 | a0001c0001t0003a0001c0001t0019a0001c0001t0045 | a0001c0001t0003g0080 a0001c0001t0003g0144 a0001c0001t0019g0177 others(2): Show |
5 | 372 | 0.0134 | -8 | c.109 others(25): Show |
SNX2 | ENSG00000205302.7 | transcript | ENST00000379516.7 | protein_coding | 1/14 | INFO_REALIGN_3_PRIME | chr5 | TogoVar | ||||||
SNX2_chr5_122770080_122839543 | 122791119 | ATTTTTTT others(1): Show |
A | intron_variant | MODIFIER | HG00140.hp1 HG00280.hp1 HG00280.hp2 others(155): Show |
a0001a0002a0003others(1): Show | a0001c0001a0001c0002a0001c0010others(3): Show | a0001c0001t0001a0001c0001t0003a0001c0001t0004others(38): Show | a0001c0001t0001g0007 a0001c0001t0001g0089 a0001c0001t0001g0096 others(152): Show |
158 | 372 | 0.4247 | -8 | c.109 others(25): Show |
SNX2 | ENSG00000205302.7 | transcript | ENST00000379516.7 | protein_coding | 1/14 | INFO_REALIGN_3_PRIME | chr5 | TogoVar | ||||||
SNX2_chr5_122770080_122839543 | 122806599 | TTTTATTT others(1): Show |
T | intron_variant | MODIFIER | HG00140.hp2 HG00438.hp2 HG00544.hp1 others(130): Show |
a0001a0004a0005 | a0001c0001a0004c0003a0005c0006 | a0001c0001t0001a0001c0001t0005a0001c0001t0008others(17): Show | a0001c0001t0001g0002 a0001c0001t0001g0003 a0001c0001t0001g0004 others(129): Show |
133 | 372 | 0.3575 | -8 | c.644 others(25): Show |
SNX2 | ENSG00000205302.7 | transcript | ENST00000379516.7 | protein_coding | 6/14 | INFO_REALIGN_3_PRIME | chr5 | TogoVar | ||||||
SNX2_chr5_122770080_122839543 | 122811825 | CTAAATAA others(1): Show |
C | intron_variant | MODIFIER | HG02280.hp1 HG03209.hp2 NA20129.hp2 others(1): Show |
a0001 | a0001c0001 | a0001c0001t0012a0001c0001t0029a0001c0001t0053 | a0001c0001t0012g0017 a0001c0001t0029g0289 a0001c0001t0029g0290 others(1): Show |
4 | 372 | 0.0108 | -8 | c.722 others(25): Show |
SNX2 | ENSG00000205302.7 | transcript | ENST00000379516.7 | protein_coding | 7/14 | INFO_REALIGN_3_PRIME | chr5 | TogoVar | ||||||
SNX2_chr5_122770080_122839543 | 122829775 | TACACACA others(1): Show |
T | 3_prime_UTR_variant | MODIFIER | HG00738.hp1 HG01168.hp2 HG01943.hp2 others(1): Show |
a0001 | a0001c0001 | a0001c0001t0031a0001c0001t0061a0001c0001t0062 | a0001c0001t0031g0261 a0001c0001t0031g0263 a0001c0001t0061g0262 others(1): Show |
4 | 372 | 0.0108 | -8 | c.*15 others(17): Show |
SNX2 | ENSG00000205302.7 | transcript | ENST00000379516.7 | protein_coding | 15/15 | 156 | INFO_REALIGN_3_PRIME | chr5 | TogoVar | |||||
SNX30_chr9_112745760_112879987 | 112775542 | TTGTGTGT others(1): Show |
T | intron_variant | MODIFIER | HG00423.hp2 HG02258.hp2 HG02698.hp1 others(7): Show |
a0001 | a0001c0001a0001c0002 | a0001c0001t0001a0001c0002t0004a0001c0002t0005others(4): Show | a0001c0001t0001g0134 a0001c0001t0001g0139 a0001c0002t0004g0219 others(7): Show |
10 | 338 | 0.0296 | -8 | c.156 others(27): Show |
SNX30 | ENSG00000148158.17 | transcript | ENST00000374232.8 | protein_coding | 1/8 | INFO_REALIGN_3_PRIME | chr9 | TogoVar | ||||||
SNX30_chr9_112745760_112879987 | 112834835 | CACACACA others(1): Show |
C | intron_variant | MODIFIER | HG02145.hp2 HG02922.hp2 HG02976.hp2 others(1): Show |
a0001 | a0001c0002 | a0001c0002t0004 | a0001c0002t0004g0127 a0001c0002t0004g0219 a0001c0002t0004g0220 others(1): Show |
4 | 338 | 0.0118 | -8 | c.619 others(25): Show |
SNX30 | ENSG00000148158.17 | transcript | ENST00000374232.8 | protein_coding | 4/8 | INFO_REALIGN_3_PRIME | chr9 | TogoVar | ||||||
SNX30_chr9_112745760_112879987 | 112834843 | AACACACA others(1): Show |
A | intron_variant | MODIFIER | HG00741.hp1 HG01361.hp2 HG02257.hp1 others(12): Show |
a0001a0002a0005 | a0001c0001a0001c0002a0001c0006others(2): Show | a0001c0001t0002a0001c0001t0003a0001c0002t0005others(4): Show | a0001c0001t0002g0090 a0001c0001t0002g0102 a0001c0001t0002g0115 others(12): Show |
15 | 338 | 0.0444 | -8 | c.619 others(25): Show |
SNX30 | ENSG00000148158.17 | transcript | ENST00000374232.8 | protein_coding | 4/8 | INFO_REALIGN_3_PRIME | chr9 | TogoVar | ||||||
SNX30_chr9_112745760_112879987 | 112864997 | ACACACAC others(1): Show |
A | intron_variant | MODIFIER | HG00597.hp1 HG01943.hp2 HG02109.hp1 others(28): Show |
a0001a0005 | a0001c0001a0001c0002a0005c0010 | a0001c0001t0005a0001c0001t0012a0001c0001t0014others(7): Show | a0001c0001t0005g0058 a0001c0001t0005g0059 a0001c0001t0005g0060 others(28): Show |
31 | 338 | 0.0917 | -8 | c.125 others(25): Show |
SNX30 | ENSG00000148158.17 | transcript | ENST00000374232.8 | protein_coding | 8/8 | INFO_REALIGN_3_PRIME | chr9 | TogoVar | ||||||
SNX30_chr9_112745760_112879987 | 112865624 | CATATATA others(1): Show |
C | intron_variant | MODIFIER | HG01167.hp2 HG01175.hp2 NA18951.hp2 others(2): Show |
a0001a0004 | a0001c0001a0004c0008 | a0001c0001t0001a0001c0001t0034a0004c0008t0043 | a0001c0001t0001g0133 a0001c0001t0001g0179 a0001c0001t0001g0236 others(2): Show |
5 | 338 | 0.0148 | -8 | c.125 others(27): Show |
SNX30 | ENSG00000148158.17 | transcript | ENST00000374232.8 | protein_coding | 8/8 | INFO_REALIGN_3_PRIME | chr9 | TogoVar | ||||||
SNX31_chr8_100567889_100654665 | 100581317 | ATCTATAT others(1): Show |
A | intron_variant | MODIFIER | HG02258.hp1 HG02572.hp2 HG03516.hp1 |
a0002a0003 | a0002c0002a0003c0003 | a0002c0002t0005a0003c0003t0004a0003c0003t0005 | a0002c0002t0005g0072 a0003c0003t0004g0134 a0003c0003t0005g0108 |
3 | 304 | 0.0099 | -8 | c.117 others(27): Show |
SNX31 | ENSG00000174226.9 | transcript | ENST00000311812.7 | protein_coding | 12/13 | chr8 | TogoVar | |||||||
SNX31_chr8_100567889_100654665 | 100641625 | CATATATA others(1): Show |
C | intron_variant | MODIFIER | HG01192.hp1 HG01361.hp1 HG01884.hp1 others(15): Show |
a0003a0005a0007others(2): Show | a0003c0003a0005c0005a0007c0007others(2): Show | a0003c0003t0001a0003c0003t0003a0003c0003t0014others(5): Show | a0003c0003t0001g0179 a0003c0003t0001g0189 a0003c0003t0003g0168 others(15): Show |
18 | 304 | 0.0592 | -8 | c.142 others(25): Show |
SNX31 | ENSG00000174226.9 | transcript | ENST00000311812.7 | protein_coding | 2/13 | chr8 | TogoVar | |||||||
SNX32_chr11_65828963_65858701 | 65834339 | CTCTGTGT others(1): Show |
C | intron_variant | MODIFIER | HG00438.hp2 HG00597.hp1 HG02165.hp2 |
a0001a0002 | a0001c0001a0002c0005 | a0001c0001t0001a0002c0005t0001 | a0001c0001t0001g0108 a0002c0005t0001g0106 a0002c0005t0001g0107 |
3 | 390 | 0.0077 | -8 | c.36+ others(21): Show |
SNX32 | ENSG00000172803.18 | transcript | ENST00000308342.7 | protein_coding | 1/12 | INFO_REALIGN_3_PRIME | chr11 | TogoVar | ||||||
SNX4_chr3_125441650_125525202 | 125453496 | TTTTATTT others(1): Show |
T | intron_variant | MODIFIER | HG00639.hp1 HG00733.hp1 HG00735.hp1 others(65): Show |
a0001 | a0001c0001 | a0001c0001t0001a0001c0001t0002 | a0001c0001t0001g0009 a0001c0001t0001g0010 a0001c0001t0001g0011 others(65): Show |
68 | 360 | 0.1889 | -8 | c.119 others(25): Show |
SNX4 | ENSG00000114520.11 | transcript | ENST00000251775.9 | protein_coding | 12/13 | chr3 | TogoVar | |||||||
SNX4_chr3_125441650_125525202 | 125506817 | TAAAAAAA others(1): Show |
T | intron_variant | MODIFIER | HG00099.hp1 HG00323.hp1 HG00408.hp1 others(104): Show |
a0001a0002 | a0001c0001a0002c0002 | a0001c0001t0001a0001c0001t0002a0002c0002t0002 | a0001c0001t0001g0001 a0001c0001t0001g0002 a0001c0001t0001g0015 others(102): Show |
107 | 360 | 0.2972 | -8 | c.142 others(25): Show |
SNX4 | ENSG00000114520.11 | transcript | ENST00000251775.9 | protein_coding | 1/13 | chr3 | TogoVar | |||||||
SNX6_chr14_34556093_34635148 | 34558990 | TACACACA others(1): Show |
T | downstream_gene_variant | MODIFIER | HG00673.hp1 HG00738.hp2 HG00741.hp2 others(22): Show |
a0001 | a0001c0001a0001c0002 | a0001c0001t0001a0001c0001t0005a0001c0001t0022others(1): Show | a0001c0001t0001g0006 a0001c0001t0001g0075 a0001c0001t0001g0138 others(22): Show |
25 | 322 | 0.0776 | -8 | c.*41 others(19): Show |
SNX6 | ENSG00000129515.20 | transcript | ENST00000362031.10 | protein_coding | 2102 | chr14 | TogoVar | |||||||
SNX6_chr14_34556093_34635148 | 34559032 | CACACACA others(1): Show |
C | downstream_gene_variant | MODIFIER | HG01884.hp2 HG01891.hp1 HG03098.hp1 others(8): Show |
a0001 | a0001c0001a0001c0002 | a0001c0001t0002a0001c0001t0004a0001c0002t0002 | a0001c0001t0002g0050 a0001c0001t0004g0022 a0001c0001t0004g0023 others(8): Show |
11 | 322 | 0.0342 | -8 | c.*40 others(19): Show |
SNX6 | ENSG00000129515.20 | transcript | ENST00000362031.10 | protein_coding | 2060 | chr14 | TogoVar | |||||||
SNX6_chr14_34556093_34635148 | 34578937 | CAAAAAAA others(1): Show |
C | intron_variant | MODIFIER | HG02647.hp2 HG02818.hp2 HG03098.hp2 others(4): Show |
a0001 | a0001c0001 | a0001c0001t0001a0001c0001t0004 | a0001c0001t0001g0149 a0001c0001t0001g0166 a0001c0001t0004g0085 others(4): Show |
7 | 322 | 0.0217 | -8 | c.834 others(25): Show |
SNX6 | ENSG00000129515.20 | transcript | ENST00000362031.10 | protein_coding | 10/13 | chr14 | TogoVar | |||||||
SNX6_chr14_34556093_34635148 | 34627469 | TGTTTTTT others(1): Show |
T | intron_variant | MODIFIER | HG02976.hp1 HG03486.hp2 NA18522.hp1 |
a0001 | a0001c0002 | a0001c0002t0008 | a0001c0002t0008g0239 a0001c0002t0008g0240 a0001c0002t0008g0241 |
3 | 322 | 0.0093 | -8 | c.54+ others(23): Show |
SNX6 | ENSG00000129515.20 | transcript | ENST00000362031.10 | protein_coding | 2/13 | chr14 | TogoVar | |||||||
SNX7_chr1_98656721_98765500 | 98659515 | AAAACAAA others(1): Show |
A | upstream_gene_variant | MODIFIER | HG00323.hp2 HG01081.hp2 HG01106.hp2 others(39): Show |
a0001 | a0001c0001a0001c0002a0001c0004 | a0001c0001t0001a0001c0002t0001a0001c0004t0001 | a0001c0001t0001g0315 a0001c0001t0001g0354 a0001c0001t0001g0356 others(39): Show |
42 | 378 | 0.1111 | -8 | c.-22 others(19): Show |
SNX7 | ENSG00000162627.17 | transcript | ENST00000306121.8 | protein_coding | 2205 | chr1 | TogoVar | |||||||
SNX7_chr1_98656721_98765500 | 98663252 | GGTTTTTT others(1): Show |
G | intron_variant | MODIFIER | HG00738.hp2 HG01243.hp1 HG01358.hp2 others(11): Show |
a0001a0002 | a0001c0001a0001c0002a0001c0007others(1): Show | a0001c0001t0001a0001c0002t0001a0001c0007t0001others(1): Show | a0001c0001t0001g0125 a0001c0001t0001g0127 a0001c0001t0001g0320 others(11): Show |
14 | 378 | 0.0370 | -8 | c.180 others(25): Show |
SNX7 | ENSG00000162627.17 | transcript | ENST00000306121.8 | protein_coding | 1/8 | chr1 | TogoVar | |||||||
SNX7_chr1_98656721_98765500 | 98670870 | TTTTATTT others(1): Show |
T | intron_variant | MODIFIER | HG00140.hp1 HG00140.hp2 HG00280.hp1 others(317): Show |
a0001a0002 | a0001c0001a0001c0002a0001c0004others(4): Show | a0001c0001t0001a0001c0002t0001a0001c0004t0001others(4): Show | a0001c0001t0001g0001 a0001c0001t0001g0002 a0001c0001t0001g0008 others(313): Show |
320 | 378 | 0.8466 | -8 | c.180 others(25): Show |
SNX7 | ENSG00000162627.17 | transcript | ENST00000306121.8 | protein_coding | 1/8 | INFO_REALIGN_3_PRIME | chr1 | TogoVar | ||||||
SNX7_chr1_98656721_98765500 | 98677990 | CGTGTGTG others(1): Show |
C | intron_variant | MODIFIER | HG00438.hp1 HG00673.hp1 HG02040.hp2 others(19): Show |
a0001 | a0001c0001a0001c0004 | a0001c0001t0001a0001c0001t0002a0001c0004t0001 | a0001c0001t0001g0006 a0001c0001t0001g0007 a0001c0001t0001g0112 others(17): Show |
22 | 378 | 0.0582 | -8 | c.181 others(25): Show |
SNX7 | ENSG00000162627.17 | transcript | ENST00000306121.8 | protein_coding | 1/8 | INFO_REALIGN_3_PRIME | chr1 | TogoVar | ||||||
SNX8_chr7_2246770_2319441 | 2252982 | CCCTGTTC others(1): Show |
C | 3_prime_UTR_variant | MODIFIER | HG01192.hp2 HG01884.hp1 HG01891.hp1 others(28): Show |
a0001a0002 | a0001c0001a0001c0019a0002c0004 | a0001c0001t0007a0001c0001t0017a0001c0001t0022others(10): Show | a0001c0001t0007g0019 a0001c0001t0007g0024 a0001c0001t0007g0025 others(28): Show |
31 | 370 | 0.0838 | -8 | c.*20 others(19): Show |
SNX8 | ENSG00000106266.11 | transcript | ENST00000222990.8 | protein_coding | 11/11 | 2066 | chr7 | TogoVar | ||||||
SNX9_chr6_157818246_157950077 | 157911112 | CAAATAAA others(1): Show |
C | intron_variant | MODIFIER | HG00099.hp2 HG00280.hp1 HG00408.hp2 others(99): Show |
a0001a0002a0003 | a0001c0001a0001c0003a0001c0009others(2): Show | a0001c0001t0003a0001c0001t0005a0001c0001t0011others(11): Show | a0001c0001t0003g0250 a0001c0001t0003g0257 a0001c0001t0003g0277 others(99): Show |
102 | 302 | 0.3378 | -8 | c.949 others(25): Show |
SNX9 | ENSG00000130340.17 | transcript | ENST00000392185.8 | protein_coding | 9/17 | INFO_REALIGN_3_PRIME | chr6 | TogoVar | ||||||
SOAT1_chr1_179288797_179363680 | 179295966 | ATTTTTTT others(1): Show |
A | intron_variant | MODIFIER | HG00140.hp1 HG00140.hp2 HG00738.hp1 others(10): Show |
a0001a0002 | a0001c0001a0001c0002a0001c0004others(3): Show | a0001c0001t0005a0001c0001t0006a0001c0001t0034others(8): Show | a0001c0001t0005g0016 a0001c0001t0006g0015 a0001c0001t0034g0012 others(10): Show |
13 | 382 | 0.0340 | -8 | c.-9+ others(23): Show |
SOAT1 | ENSG00000057252.13 | transcript | ENST00000367619.8 | protein_coding | 1/15 | INFO_REALIGN_3_PRIME | chr1 | TogoVar |