view | regionname | pos | ref | alt | annotation | impact | samples | ahapids | chapids | thapids | thapids | ac | an | af | len | hgvs_c | hgvs_p | genename | geneid | featuretype | featureid | transcript_biotype | rank | cdna cdna pos length
|
cds cds pos length
|
aa aa pos length
|
distance | status | chr | external |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
SORCS1_chr10_106568663_107169706 | 106953142 | AGTGTGTG others(1): Show |
A | intron_variant | MODIFIER | HG00408.hp1 HG00408.hp2 HG00438.hp2 others(75): Show |
a0001a0002a0003others(4): Show | a0001c0001a0001c0002a0001c0003others(18): Show | a0001c0001t0001a0001c0001t0002a0001c0001t0003others(36): Show | a0001c0001t0001g0024 a0001c0001t0001g0036 a0001c0001t0001g0073 others(75): Show |
78 | 130 | 0.6000 | -8 | c.626 others(25): Show |
SORCS1 | ENSG00000108018.17 | transcript | ENST00000263054.11 | protein_coding | 2/25 | chr10 | TogoVar | |||||||
SORCS1_chr10_106568663_107169706 | 106963110 | ATTTTTTT others(1): Show |
A | intron_variant | MODIFIER | HG00408.hp1 HG00609.hp2 HG01081.hp2 others(18): Show |
a0001a0003a0004others(2): Show | a0001c0001a0001c0002a0001c0003others(8): Show | a0001c0001t0001a0001c0001t0002a0001c0001t0004others(13): Show | a0001c0001t0001g0024 a0001c0001t0001g0036 a0001c0001t0002g0012 others(18): Show |
21 | 130 | 0.1615 | -8 | c.559 others(25): Show |
SORCS1 | ENSG00000108018.17 | transcript | ENST00000263054.11 | protein_coding | 1/25 | chr10 | TogoVar | |||||||
SORCS1_chr10_106568663_107169706 | 106996225 | TAAAAAAA others(1): Show |
T | intron_variant | MODIFIER | HG01891.hp1 HG02145.hp1 HG02257.hp1 others(9): Show |
a0001a0002a0003others(2): Show | a0001c0001a0001c0003a0001c0004others(5): Show | a0001c0001t0002a0001c0001t0020a0001c0003t0001others(7): Show | a0001c0001t0002g0061 a0001c0001t0020g0021 a0001c0003t0001g0033 others(9): Show |
12 | 130 | 0.0923 | -8 | c.559 others(27): Show |
SORCS1 | ENSG00000108018.17 | transcript | ENST00000263054.11 | protein_coding | 1/25 | chr10 | TogoVar | |||||||
SORCS1_chr10_106568663_107169706 | 107003429 | AGTGTGTG others(1): Show |
A | intron_variant | MODIFIER | HG00558.hp1 HG01891.hp2 HG02145.hp1 others(18): Show |
a0001a0002a0005others(1): Show | a0001c0001a0001c0002a0001c0003others(7): Show | a0001c0001t0001a0001c0001t0002a0001c0001t0004others(13): Show | a0001c0001t0001g0055 a0001c0001t0002g0012 a0001c0001t0002g0059 others(18): Show |
21 | 130 | 0.1615 | -8 | c.559 others(27): Show |
SORCS1 | ENSG00000108018.17 | transcript | ENST00000263054.11 | protein_coding | 1/25 | chr10 | TogoVar | |||||||
SORCS1_chr10_106568663_107169706 | 107021513 | CAAAAAAA others(1): Show |
C | intron_variant | MODIFIER | HG00408.hp2 HG00438.hp2 HG00597.hp2 others(39): Show |
a0001a0002a0008others(1): Show | a0001c0001a0001c0002a0001c0003others(9): Show | a0001c0001t0001a0001c0001t0002a0001c0001t0004others(21): Show | a0001c0001t0001g0024 a0001c0001t0001g0036 a0001c0001t0001g0055 others(39): Show |
42 | 130 | 0.3231 | -8 | c.559 others(27): Show |
SORCS1 | ENSG00000108018.17 | transcript | ENST00000263054.11 | protein_coding | 1/25 | chr10 | TogoVar | |||||||
SORCS1_chr10_106568663_107169706 | 107042594 | CAGCGGGG others(1): Show |
C | intron_variant | MODIFIER | HG02258.hp1 HG02976.hp2 |
a0001 | a0001c0004a0001c0007 | a0001c0004t0013a0001c0007t0021 | a0001c0004t0013g0013 a0001c0007t0021g0113 |
2 | 130 | 0.0154 | -8 | c.559 others(27): Show |
SORCS1 | ENSG00000108018.17 | transcript | ENST00000263054.11 | protein_coding | 1/25 | chr10 | TogoVar | |||||||
SORCS1_chr10_106568663_107169706 | 107167368 | TATAATAT others(1): Show |
T | upstream_gene_variant | MODIFIER | HG03098.hp1 HG03516.hp1 |
a0001 | a0001c0003a0001c0009 | a0001c0003t0002a0001c0009t0001 | a0001c0003t0002g0005 a0001c0009t0001g0009 |
2 | 130 | 0.0154 | -8 | c.-28 others(19): Show |
SORCS1 | ENSG00000108018.17 | transcript | ENST00000263054.11 | protein_coding | 2663 | chr10 | TogoVar | |||||||
SORCS2_chr4_7187538_7747827 | 7195171 | GGTGTGTG others(1): Show |
G | intron_variant | MODIFIER | HG00099.hp1 HG00323.hp1 HG00639.hp1 others(63): Show |
a0001a0002a0003others(5): Show | a0001c0001a0001c0002a0001c0003others(27): Show | a0001c0001t0003a0001c0001t0004a0001c0001t0006others(56): Show | a0001c0001t0003g0048 a0001c0001t0003g0053 a0001c0001t0003g0098 others(63): Show |
66 | 168 | 0.3929 | -8 | c.480 others(25): Show |
SORCS2 | ENSG00000184985.17 | transcript | ENST00000507866.6 | protein_coding | 1/26 | INFO_REALIGN_3_PRIME | chr4 | TogoVar | ||||||
SORCS2_chr4_7187538_7747827 | 7262375 | TATCCATC others(1): Show |
T | intron_variant | MODIFIER | HG00323.hp1 HG00323.hp2 HG00639.hp1 others(58): Show |
a0001a0002a0003others(8): Show | a0001c0001a0001c0002a0001c0003others(23): Show | a0001c0001t0002a0001c0001t0003a0001c0001t0005others(50): Show | a0001c0001t0002g0089 a0001c0001t0003g0098 a0001c0001t0005g0067 others(58): Show |
61 | 168 | 0.3631 | -8 | c.480 others(27): Show |
SORCS2 | ENSG00000184985.17 | transcript | ENST00000507866.6 | protein_coding | 1/26 | INFO_REALIGN_3_PRIME | chr4 | TogoVar | ||||||
SORCS2_chr4_7187538_7747827 | 7290796 | TTTCATTC others(1): Show |
T | intron_variant | MODIFIER | HG01891.hp1 NA19043.hp2 |
a0001a0005 | a0001c0015a0005c0022 | a0001c0015t0011a0005c0022t0039 | a0001c0015t0011g0002 a0005c0022t0039g0153 |
2 | 168 | 0.0119 | -8 | c.480 others(27): Show |
SORCS2 | ENSG00000184985.17 | transcript | ENST00000507866.6 | protein_coding | 1/26 | INFO_REALIGN_3_PRIME | chr4 | TogoVar | ||||||
SORCS2_chr4_7187538_7747827 | 7294795 | CCTCCTCC others(1): Show |
C | intron_variant | MODIFIER | HG00099.hp1 HG00099.hp2 HG00438.hp2 others(75): Show |
a0001a0002a0003others(11): Show | a0001c0001a0001c0002a0001c0003others(35): Show | a0001c0001t0002a0001c0001t0003a0001c0001t0004others(68): Show | a0001c0001t0002g0089 a0001c0001t0003g0098 a0001c0001t0004g0097 others(75): Show |
78 | 168 | 0.4643 | -8 | c.481 others(29): Show |
SORCS2 | ENSG00000184985.17 | transcript | ENST00000507866.6 | protein_coding | 1/26 | INFO_REALIGN_3_PRIME | chr4 | TogoVar | ||||||
SORCS2_chr4_7187538_7747827 | 7326941 | GCCTCTCC others(1): Show |
G | intron_variant | MODIFIER | HG01167.hp1 HG01884.hp2 HG02280.hp2 others(5): Show |
a0001a0005a0009 | a0001c0001a0001c0009a0001c0032others(3): Show | a0001c0001t0004a0001c0001t0018a0001c0009t0051others(4): Show | a0001c0001t0004g0097 a0001c0001t0004g0138 a0001c0001t0018g0099 others(5): Show |
8 | 168 | 0.0476 | -8 | c.481 others(27): Show |
SORCS2 | ENSG00000184985.17 | transcript | ENST00000507866.6 | protein_coding | 1/26 | chr4 | TogoVar | |||||||
SORCS2_chr4_7187538_7747827 | 7374121 | TTCTTTCC others(1): Show |
T | intron_variant | MODIFIER | HG01261.hp1 HG02040.hp1 HG02040.hp2 others(1): Show |
a0001a0002 | a0001c0002a0001c0011a0001c0030others(1): Show | a0001c0002t0010a0001c0011t0060a0001c0030t0026others(1): Show | a0001c0002t0010g0045 a0001c0011t0060g0107 a0001c0030t0026g0144 others(1): Show |
4 | 168 | 0.0238 | -8 | c.481 others(27): Show |
SORCS2 | ENSG00000184985.17 | transcript | ENST00000507866.6 | protein_coding | 1/26 | INFO_REALIGN_3_PRIME | chr4 | TogoVar | ||||||
SORCS2_chr4_7187538_7747827 | 7374129 | CTCTTTCT others(1): Show |
C | intron_variant | MODIFIER | HG01069.hp1 HG01071.hp2 HG02622.hp1 others(1): Show |
a0001a0004 | a0001c0002a0001c0009a0004c0044 | a0001c0002t0006a0001c0009t0029a0004c0044t0046 | a0001c0002t0006g0158 a0001c0002t0006g0159 a0001c0009t0029g0038 others(1): Show |
4 | 168 | 0.0238 | -8 | c.481 others(27): Show |
SORCS2 | ENSG00000184985.17 | transcript | ENST00000507866.6 | protein_coding | 1/26 | INFO_REALIGN_3_PRIME | chr4 | TogoVar | ||||||
SORCS2_chr4_7187538_7747827 | 7386204 | TGCACACA others(1): Show |
T | intron_variant | MODIFIER | HG01167.hp1 HG01175.hp1 HG01361.hp2 others(12): Show |
a0001a0002a0003others(2): Show | a0001c0001a0001c0003a0001c0005others(7): Show | a0001c0001t0020a0001c0001t0032a0001c0001t0068others(12): Show | a0001c0001t0020g0052 a0001c0001t0032g0141 a0001c0001t0068g0007 others(12): Show |
15 | 168 | 0.0893 | -8 | c.481 others(27): Show |
SORCS2 | ENSG00000184985.17 | transcript | ENST00000507866.6 | protein_coding | 1/26 | INFO_REALIGN_3_PRIME | chr4 | TogoVar | ||||||
SORCS2_chr4_7187538_7747827 | 7387830 | GCACATAC others(1): Show |
G | intron_variant | MODIFIER | HG01109.hp2 HG01167.hp1 HG01175.hp1 others(27): Show |
a0001a0002a0003others(5): Show | a0001c0001a0001c0002a0001c0003others(14): Show | a0001c0001t0004a0001c0001t0013a0001c0001t0018others(24): Show | a0001c0001t0004g0097 a0001c0001t0004g0138 a0001c0001t0013g0125 others(27): Show |
30 | 168 | 0.1786 | -8 | c.481 others(25): Show |
SORCS2 | ENSG00000184985.17 | transcript | ENST00000507866.6 | protein_coding | 1/26 | chr4 | TogoVar | |||||||
SORCS2_chr4_7187538_7747827 | 7387961 | CACACAGA others(1): Show |
C | intron_variant | MODIFIER | HG02615.hp2 HG03471.hp2 |
a0001 | a0001c0001a0001c0005 | a0001c0001t0018a0001c0005t0042 | a0001c0001t0018g0099 a0001c0005t0042g0157 |
2 | 168 | 0.0119 | -8 | c.481 others(25): Show |
SORCS2 | ENSG00000184985.17 | transcript | ENST00000507866.6 | protein_coding | 1/26 | INFO_REALIGN_3_PRIME | chr4 | TogoVar | ||||||
SORCS2_chr4_7187538_7747827 | 7387979 | TACACATG others(1): Show |
T | intron_variant | MODIFIER | HG02280.hp2 HG03453.hp1 |
a0001 | a0001c0038a0001c0041 | a0001c0038t0038a0001c0041t0013 | a0001c0038t0038g0128 a0001c0041t0013g0031 |
2 | 168 | 0.0119 | -8 | c.481 others(25): Show |
SORCS2 | ENSG00000184985.17 | transcript | ENST00000507866.6 | protein_coding | 1/26 | INFO_REALIGN_3_PRIME | chr4 | TogoVar | ||||||
SORCS2_chr4_7187538_7747827 | 7388892 | TTGTTGTG others(1): Show |
T | intron_variant | MODIFIER | HG00099.hp2 HG00323.hp1 HG00438.hp2 others(46): Show |
a0001a0002a0003others(6): Show | a0001c0001a0001c0002a0001c0003others(15): Show | a0001c0001t0002a0001c0001t0003a0001c0001t0005others(41): Show | a0001c0001t0002g0089 a0001c0001t0003g0048 a0001c0001t0003g0098 others(46): Show |
49 | 168 | 0.2917 | -8 | c.481 others(25): Show |
SORCS2 | ENSG00000184985.17 | transcript | ENST00000507866.6 | protein_coding | 1/26 | INFO_REALIGN_3_PRIME | chr4 | TogoVar | ||||||
SORCS2_chr4_7187538_7747827 | 7427840 | ACCGCCCC others(1): Show |
A | intron_variant | MODIFIER | HG00099.hp1 HG00099.hp2 HG01167.hp2 others(11): Show |
a0001a0003 | a0001c0001a0001c0002a0001c0011others(1): Show | a0001c0001t0003a0001c0001t0004a0001c0001t0005others(9): Show | a0001c0001t0003g0053 a0001c0001t0004g0138 a0001c0001t0005g0067 others(11): Show |
14 | 168 | 0.0833 | -8 | c.548 others(27): Show |
SORCS2 | ENSG00000184985.17 | transcript | ENST00000507866.6 | protein_coding | 2/26 | INFO_REALIGN_3_PRIME | chr4 | TogoVar | ||||||
SORCS2_chr4_7187538_7747827 | 7448604 | CCCTTCCT others(1): Show |
C | intron_variant | MODIFIER | HG00639.hp1 HG01070.hp2 HG01109.hp1 others(45): Show |
a0001a0002a0003others(6): Show | a0001c0001a0001c0002a0001c0003others(21): Show | a0001c0001t0002a0001c0001t0003a0001c0001t0004others(41): Show | a0001c0001t0002g0089 a0001c0001t0003g0048 a0001c0001t0004g0097 others(45): Show |
48 | 168 | 0.2857 | -8 | c.548 others(27): Show |
SORCS2 | ENSG00000184985.17 | transcript | ENST00000507866.6 | protein_coding | 2/26 | INFO_REALIGN_3_PRIME | chr4 | TogoVar | ||||||
SORCS2_chr4_7187538_7747827 | 7449007 | TCCTCCCT others(1): Show |
T | intron_variant | MODIFIER | HG02257.hp1 HG02486.hp2 |
a0001a0013 | a0001c0001a0013c0039 | a0001c0001t0023a0013c0039t0063 | a0001c0001t0023g0168 a0013c0039t0063g0064 |
2 | 168 | 0.0119 | -8 | c.548 others(27): Show |
SORCS2 | ENSG00000184985.17 | transcript | ENST00000507866.6 | protein_coding | 2/26 | INFO_REALIGN_3_PRIME | chr4 | TogoVar | ||||||
SORCS2_chr4_7187538_7747827 | 7466976 | GGTGGCTC others(1): Show |
G | intron_variant | MODIFIER | HG01109.hp2 HG02809.hp2 HG02976.hp2 others(1): Show |
a0001a0004a0008 | a0001c0002a0001c0015a0004c0007others(1): Show | a0001c0002t0004a0001c0015t0011a0004c0007t0001others(1): Show | a0001c0002t0004g0028 a0001c0015t0011g0015 a0004c0007t0001g0126 others(1): Show |
4 | 168 | 0.0238 | -8 | c.549 others(27): Show |
SORCS2 | ENSG00000184985.17 | transcript | ENST00000507866.6 | protein_coding | 2/26 | INFO_REALIGN_3_PRIME | chr4 | TogoVar | ||||||
SORCS2_chr4_7187538_7747827 | 7470240 | TCCATCCT others(1): Show |
T | intron_variant | MODIFIER | HG03209.hp2 HG03453.hp1 |
a0001 | a0001c0037a0001c0038 | a0001c0037t0020a0001c0038t0038 | a0001c0037t0020g0017 a0001c0038t0038g0128 |
2 | 168 | 0.0119 | -8 | c.549 others(27): Show |
SORCS2 | ENSG00000184985.17 | transcript | ENST00000507866.6 | protein_coding | 2/26 | INFO_REALIGN_3_PRIME | chr4 | TogoVar | ||||||
SORCS2_chr4_7187538_7747827 | 7543487 | TCATCCAT others(1): Show |
T | intron_variant | MODIFIER | HG00099.hp1 HG00323.hp1 HG00323.hp2 others(99): Show |
a0001a0002a0003others(10): Show | a0001c0001a0001c0002a0001c0003others(31): Show | a0001c0001t0002a0001c0001t0003a0001c0001t0004others(85): Show | a0001c0001t0002g0089 a0001c0001t0003g0048 a0001c0001t0003g0053 others(99): Show |
102 | 168 | 0.6071 | -8 | c.648 others(27): Show |
SORCS2 | ENSG00000184985.17 | transcript | ENST00000507866.6 | protein_coding | 3/26 | INFO_REALIGN_3_PRIME | chr4 | TogoVar | ||||||
SORCS2_chr4_7187538_7747827 | 7543631 | CCCATCCG others(1): Show |
C | intron_variant | MODIFIER | HG00099.hp2 HG00642.hp1 HG01069.hp2 others(2): Show |
a0001a0002 | a0001c0001a0001c0002a0001c0011others(2): Show | a0001c0001t0009a0001c0002t0007a0001c0011t0016others(2): Show | a0001c0001t0009g0085 a0001c0002t0007g0008 a0001c0011t0016g0076 others(2): Show |
5 | 168 | 0.0298 | -8 | c.648 others(27): Show |
SORCS2 | ENSG00000184985.17 | transcript | ENST00000507866.6 | protein_coding | 3/26 | INFO_REALIGN_3_PRIME | chr4 | TogoVar | ||||||
SORCS2_chr4_7187538_7747827 | 7543703 | TCCATCCA others(1): Show |
T | intron_variant | MODIFIER | HG01070.hp1 HG01071.hp1 HG01106.hp1 others(15): Show |
a0001a0002a0003others(2): Show | a0001c0001a0001c0002a0001c0003others(7): Show | a0001c0001t0007a0001c0001t0069a0001c0001t0072others(14): Show | a0001c0001t0007g0063 a0001c0001t0069g0092 a0001c0001t0072g0161 others(15): Show |
18 | 168 | 0.1071 | -8 | c.648 others(27): Show |
SORCS2 | ENSG00000184985.17 | transcript | ENST00000507866.6 | protein_coding | 3/26 | INFO_REALIGN_3_PRIME | chr4 | TogoVar | ||||||
SORCS2_chr4_7187538_7747827 | 7600652 | TATATACA others(1): Show |
T | intron_variant | MODIFIER | HG02451.hp1 HG02622.hp2 HG02970.hp1 others(2): Show |
a0001a0005 | a0001c0001a0001c0003a0001c0005others(1): Show | a0001c0001t0068a0001c0003t0015a0001c0003t0022others(2): Show | a0001c0001t0068g0007 a0001c0003t0015g0034 a0001c0003t0022g0043 others(2): Show |
5 | 168 | 0.0298 | -8 | c.649 others(27): Show |
SORCS2 | ENSG00000184985.17 | transcript | ENST00000507866.6 | protein_coding | 3/26 | INFO_REALIGN_3_PRIME | chr4 | TogoVar | ||||||
SORCS2_chr4_7187538_7747827 | 7600656 | TACACACA others(1): Show |
T | intron_variant | MODIFIER | HG01891.hp2 HG02886.hp1 HG03239.hp2 |
a0001a0004 | a0001c0003a0001c0005a0004c0007 | a0001c0003t0011a0001c0005t0023a0004c0007t0001 | a0001c0003t0011g0080 a0001c0005t0023g0032 a0004c0007t0001g0026 |
3 | 168 | 0.0179 | -8 | c.649 others(27): Show |
SORCS2 | ENSG00000184985.17 | transcript | ENST00000507866.6 | protein_coding | 3/26 | INFO_REALIGN_3_PRIME | chr4 | TogoVar | ||||||
SORCS2_chr4_7187538_7747827 | 7614595 | CATCCACC others(1): Show |
C | intron_variant | MODIFIER | HG00099.hp2 HG01069.hp2 HG01106.hp1 others(50): Show |
a0001a0002a0003others(8): Show | a0001c0001a0001c0002a0001c0003others(27): Show | a0001c0001t0003a0001c0001t0007a0001c0001t0009others(46): Show | a0001c0001t0003g0053 a0001c0001t0007g0063 a0001c0001t0009g0085 others(50): Show |
53 | 168 | 0.3155 | -8 | c.649 others(27): Show |
SORCS2 | ENSG00000184985.17 | transcript | ENST00000507866.6 | protein_coding | 3/26 | INFO_REALIGN_3_PRIME | chr4 | TogoVar | ||||||
SORCS2_chr4_7187538_7747827 | 7645494 | TGTGTGTG others(1): Show |
T | intron_variant | MODIFIER | HG01891.hp1 HG02647.hp1 HG02647.hp2 others(7): Show |
a0001a0003a0004 | a0001c0001a0001c0003a0001c0005others(6): Show | a0001c0001t0072a0001c0003t0019a0001c0005t0023others(6): Show | a0001c0001t0072g0161 a0001c0003t0019g0023 a0001c0005t0023g0032 others(7): Show |
10 | 168 | 0.0595 | -8 | c.813 others(25): Show |
SORCS2 | ENSG00000184985.17 | transcript | ENST00000507866.6 | protein_coding | 4/26 | INFO_REALIGN_3_PRIME | chr4 | TogoVar | ||||||
SORCS2_chr4_7187538_7747827 | 7658319 | CTGGGTGA others(1): Show |
C | intron_variant | MODIFIER | HG01258.hp1 HG02647.hp2 |
a0001 | a0001c0006a0001c0010 | a0001c0006t0002a0001c0010t0073 | a0001c0006t0002g0118 a0001c0010t0073g0167 |
2 | 168 | 0.0119 | -8 | c.888 others(25): Show |
SORCS2 | ENSG00000184985.17 | transcript | ENST00000507866.6 | protein_coding | 5/26 | INFO_REALIGN_3_PRIME | chr4 | TogoVar | ||||||
SORCS2_chr4_7187538_7747827 | 7674578 | TAAAAAAA others(1): Show |
T | intron_variant | MODIFIER | HG00639.hp1 HG01891.hp1 HG02280.hp2 others(13): Show |
a0001a0002a0003others(2): Show | a0001c0001a0001c0002a0001c0003others(8): Show | a0001c0001t0004a0001c0002t0047a0001c0003t0019others(11): Show | a0001c0001t0004g0097 a0001c0001t0004g0138 a0001c0002t0047g0020 others(13): Show |
16 | 168 | 0.0952 | -8 | c.116 others(27): Show |
SORCS2 | ENSG00000184985.17 | transcript | ENST00000507866.6 | protein_coding | 8/26 | INFO_REALIGN_3_PRIME | chr4 | TogoVar | ||||||
SORCS2_chr4_7187538_7747827 | 7676899 | TCTCTCTC others(1): Show |
T | intron_variant | MODIFIER | HG00099.hp1 HG00639.hp1 HG01175.hp1 others(38): Show |
a0001a0002a0003others(3): Show | a0001c0001a0001c0002a0001c0003others(19): Show | a0001c0001t0008a0001c0001t0010a0001c0001t0012others(36): Show | a0001c0001t0008g0142 a0001c0001t0010g0129 a0001c0001t0012g0036 others(38): Show |
41 | 168 | 0.2441 | -8 | c.134 others(25): Show |
SORCS2 | ENSG00000184985.17 | transcript | ENST00000507866.6 | protein_coding | 9/26 | INFO_REALIGN_3_PRIME | chr4 | TogoVar | ||||||
SORCS2_chr4_7187538_7747827 | 7695520 | GTGAGTGG others(1): Show |
G | intron_variant | MODIFIER | HG00099.hp1 HG01123.hp2 HG01258.hp2 others(8): Show |
a0001a0002a0010 | a0001c0001a0001c0002a0001c0003others(3): Show | a0001c0001t0008a0001c0001t0010a0001c0001t0012others(8): Show | a0001c0001t0008g0142 a0001c0001t0010g0129 a0001c0001t0012g0137 others(8): Show |
11 | 168 | 0.0655 | -8 | c.159 others(27): Show |
SORCS2 | ENSG00000184985.17 | transcript | ENST00000507866.6 | protein_coding | 11/26 | INFO_REALIGN_3_PRIME | chr4 | TogoVar | ||||||
SORCS2_chr4_7187538_7747827 | 7695555 | GATGGATG others(1): Show |
G | intron_variant | MODIFIER | HG00642.hp1 HG01069.hp2 HG01123.hp1 others(33): Show |
a0001a0002a0003others(5): Show | a0001c0001a0001c0002a0001c0003others(15): Show | a0001c0001t0003a0001c0001t0004a0001c0001t0012others(32): Show | a0001c0001t0003g0053 a0001c0001t0004g0097 a0001c0001t0004g0138 others(33): Show |
36 | 168 | 0.2143 | -8 | c.159 others(27): Show |
SORCS2 | ENSG00000184985.17 | transcript | ENST00000507866.6 | protein_coding | 11/26 | INFO_REALIGN_3_PRIME | chr4 | TogoVar | ||||||
SORCS2_chr4_7187538_7747827 | 7695628 | ATGGGTGG others(1): Show |
A | intron_variant | MODIFIER | HG00438.hp1 HG00438.hp2 HG00642.hp1 others(59): Show |
a0001a0002a0003others(6): Show | a0001c0001a0001c0002a0001c0003others(22): Show | a0001c0001t0002a0001c0001t0003a0001c0001t0005others(57): Show | a0001c0001t0002g0089 a0001c0001t0003g0048 a0001c0001t0005g0067 others(59): Show |
62 | 168 | 0.3691 | -8 | c.159 others(27): Show |
SORCS2 | ENSG00000184985.17 | transcript | ENST00000507866.6 | protein_coding | 11/26 | INFO_REALIGN_3_PRIME | chr4 | TogoVar | ||||||
SORCS2_chr4_7187538_7747827 | 7695740 | GTGGATGG others(1): Show |
G | intron_variant | MODIFIER | HG02015.hp2 HG02559.hp2 HG03492.hp1 |
a0001 | a0001c0001a0001c0002 | a0001c0001t0007a0001c0002t0004a0001c0002t0054 | a0001c0001t0007g0063 a0001c0002t0004g0018 a0001c0002t0054g0050 |
3 | 168 | 0.0179 | -8 | c.159 others(27): Show |
SORCS2 | ENSG00000184985.17 | transcript | ENST00000507866.6 | protein_coding | 11/26 | INFO_REALIGN_3_PRIME | chr4 | TogoVar | ||||||
SORCS2_chr4_7187538_7747827 | 7695872 | GTGGGTGG others(1): Show |
G | intron_variant | MODIFIER | HG01069.hp2 HG01123.hp1 HG01243.hp2 others(6): Show |
a0001a0002a0004others(1): Show | a0001c0002a0001c0005a0001c0033others(4): Show | a0001c0002t0001a0001c0002t0007a0001c0005t0014others(6): Show | a0001c0002t0001g0123 a0001c0002t0007g0008 a0001c0005t0014g0102 others(6): Show |
9 | 168 | 0.0536 | -8 | c.159 others(27): Show |
SORCS2 | ENSG00000184985.17 | transcript | ENST00000507866.6 | protein_coding | 11/26 | INFO_REALIGN_3_PRIME | chr4 | TogoVar | ||||||
SORCS2_chr4_7187538_7747827 | 7695876 | GTGGATGG others(1): Show |
G | intron_variant | MODIFIER | HG00438.hp2 HG00642.hp2 HG01070.hp2 others(19): Show |
a0001a0002a0006others(1): Show | a0001c0001a0001c0002a0001c0003others(7): Show | a0001c0001t0002a0001c0001t0003a0001c0001t0013others(18): Show | a0001c0001t0002g0089 a0001c0001t0003g0048 a0001c0001t0013g0125 others(19): Show |
22 | 168 | 0.1310 | -8 | c.159 others(27): Show |
SORCS2 | ENSG00000184985.17 | transcript | ENST00000507866.6 | protein_coding | 11/26 | INFO_REALIGN_3_PRIME | chr4 | TogoVar | ||||||
SORCS2_chr4_7187538_7747827 | 7724320 | TGGTGATA others(1): Show |
T | intron_variant | MODIFIER | HG01109.hp2 HG02258.hp1 |
a0003a0008 | a0003c0013a0008c0056 | a0003c0013t0021a0008c0056t0021 | a0003c0013t0021g0100 a0008c0056t0021g0061 |
2 | 168 | 0.0119 | -8 | c.261 others(25): Show |
SORCS2 | ENSG00000184985.17 | transcript | ENST00000507866.6 | protein_coding | 19/26 | INFO_REALIGN_3_PRIME | chr4 | TogoVar | ||||||
SORCS2_chr4_7187538_7747827 | 7743806 | GCACACAC others(1): Show |
G | downstream_gene_variant | MODIFIER | HG00438.hp1 HG00438.hp2 HG00639.hp1 others(33): Show |
a0001a0002a0003others(5): Show | a0001c0001a0001c0002a0001c0003others(14): Show | a0001c0001t0002a0001c0001t0006a0001c0001t0012others(27): Show | a0001c0001t0002g0089 a0001c0001t0006g0111 a0001c0001t0012g0036 others(33): Show |
36 | 168 | 0.2143 | -8 | c.*35 others(19): Show |
SORCS2 | ENSG00000184985.17 | transcript | ENST00000507866.6 | protein_coding | 980 | chr4 | TogoVar | |||||||
SORCS3_chr10_104636290_105270242 | 104636562 | GTGTGTGT others(1): Show |
G | upstream_gene_variant | MODIFIER | HG02717.hp2 HG02976.hp2 NA19090.hp1 |
a0001a0002a0012 | a0001c0002a0002c0004a0012c0012 | a0001c0002t0001a0002c0004t0001a0012c0012t0001 | a0001c0002t0001g0134 a0002c0004t0001g0002 a0012c0012t0001g0003 |
3 | 134 | 0.0224 | -8 | c.-47 others(19): Show |
SORCS3 | ENSG00000156395.14 | transcript | ENST00000369701.8 | protein_coding | 4727 | chr10 | TogoVar | |||||||
SORCS3_chr10_104636290_105270242 | 104728021 | TTCTATCT others(1): Show |
T | intron_variant | MODIFIER | HG00741.hp1 HG01070.hp1 HG01071.hp2 others(20): Show |
a0001a0002a0003others(2): Show | a0001c0001a0001c0002a0001c0003others(6): Show | a0001c0001t0001a0001c0001t0002a0001c0001t0003others(13): Show | a0001c0001t0001g0009 a0001c0001t0001g0026 a0001c0001t0001g0072 others(20): Show |
23 | 134 | 0.1716 | -8 | c.627 others(27): Show |
SORCS3 | ENSG00000156395.14 | transcript | ENST00000369701.8 | protein_coding | 1/26 | INFO_REALIGN_3_PRIME | chr10 | TogoVar | ||||||
SORCS3_chr10_104636290_105270242 | 104749226 | GGTGTGTG others(1): Show |
G | intron_variant | MODIFIER | HG01884.hp1 HG02647.hp1 HG03130.hp2 others(2): Show |
a0001 | a0001c0001a0001c0002a0001c0003 | a0001c0001t0001a0001c0002t0003a0001c0003t0001 | a0001c0001t0001g0076 a0001c0001t0001g0124 a0001c0002t0003g0118 others(2): Show |
5 | 134 | 0.0373 | -8 | c.628 others(27): Show |
SORCS3 | ENSG00000156395.14 | transcript | ENST00000369701.8 | protein_coding | 1/26 | INFO_REALIGN_3_PRIME | chr10 | TogoVar | ||||||
SORCS3_chr10_104636290_105270242 | 104751924 | CATATATA others(1): Show |
C | intron_variant | MODIFIER | HG00140.hp1 HG02647.hp1 HG02809.hp2 others(7): Show |
a0001a0004a0006 | a0001c0001a0001c0002a0004c0008others(2): Show | a0001c0001t0001a0001c0001t0004a0001c0002t0001others(4): Show | a0001c0001t0001g0076 a0001c0001t0004g0048 a0001c0001t0004g0094 others(7): Show |
10 | 134 | 0.0746 | -8 | c.628 others(27): Show |
SORCS3 | ENSG00000156395.14 | transcript | ENST00000369701.8 | protein_coding | 1/26 | INFO_REALIGN_3_PRIME | chr10 | TogoVar | ||||||
SORCS3_chr10_104636290_105270242 | 104886555 | CATCTATC others(1): Show |
C | intron_variant | MODIFIER | HG00609.hp2 HG00741.hp1 HG01099.hp2 others(12): Show |
a0001a0008a0009others(1): Show | a0001c0001a0001c0002a0001c0003others(3): Show | a0001c0001t0001a0001c0001t0002a0001c0001t0003others(7): Show | a0001c0001t0001g0032 a0001c0001t0001g0049 a0001c0001t0002g0099 others(12): Show |
15 | 134 | 0.1119 | -8 | c.696 others(27): Show |
SORCS3 | ENSG00000156395.14 | transcript | ENST00000369701.8 | protein_coding | 2/26 | INFO_REALIGN_3_PRIME | chr10 | TogoVar | ||||||
SORCS3_chr10_104636290_105270242 | 104904492 | AAGTTATT others(1): Show |
A | intron_variant | MODIFIER | HG00140.hp2 HG01106.hp2 HG01123.hp1 others(18): Show |
a0001 | a0001c0001a0001c0002 | a0001c0001t0001a0001c0001t0002a0001c0001t0004others(2): Show | a0001c0001t0001g0049 a0001c0001t0001g0098 a0001c0001t0001g0100 others(18): Show |
21 | 134 | 0.1567 | -8 | c.696 others(27): Show |
SORCS3 | ENSG00000156395.14 | transcript | ENST00000369701.8 | protein_coding | 2/26 | INFO_REALIGN_3_PRIME | chr10 | TogoVar | ||||||
SORCS3_chr10_104636290_105270242 | 104926852 | GTTTTTTC others(1): Show |
G | intron_variant | MODIFIER | HG01891.hp1 HG02647.hp1 HG03453.hp1 |
a0001 | a0001c0001a0001c0003 | a0001c0001t0001a0001c0001t0002a0001c0003t0002 | a0001c0001t0001g0076 a0001c0001t0002g0084 a0001c0003t0002g0010 |
3 | 134 | 0.0224 | -8 | c.795 others(27): Show |
SORCS3 | ENSG00000156395.14 | transcript | ENST00000369701.8 | protein_coding | 3/26 | INFO_REALIGN_3_PRIME | chr10 | TogoVar | ||||||
SORCS3_chr10_104636290_105270242 | 104969303 | TTGTGTGT others(1): Show |
T | intron_variant | MODIFIER | HG02647.hp2 HG02965.hp2 HG02976.hp1 others(2): Show |
a0001 | a0001c0001a0001c0002a0001c0003 | a0001c0001t0003a0001c0002t0001a0001c0002t0002others(1): Show | a0001c0001t0003g0079 a0001c0002t0001g0051 a0001c0002t0002g0053 others(2): Show |
5 | 134 | 0.0373 | -8 | c.796 others(25): Show |
SORCS3 | ENSG00000156395.14 | transcript | ENST00000369701.8 | protein_coding | 3/26 | INFO_REALIGN_3_PRIME | chr10 | TogoVar |