view | regionname | pos | ref | alt | annotation | impact | samples | ahapids | chapids | thapids | thapids | ac | an | af | len | hgvs_c | hgvs_p | genename | geneid | featuretype | featureid | transcript_biotype | rank | cdna cdna pos length
|
cds cds pos length
|
aa aa pos length
|
distance | status | chr | external |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
SPN_chr16_29658247_29675876 | 29666518 | TCTCTCTC others(1): Show |
T | 3_prime_UTR_variant | MODIFIER | HG02155.hp1 HG02257.hp2 HG02809.hp2 others(2): Show |
a0001 | a0001c0001a0001c0002a0001c0009 | a0001c0001t0086a0001c0001t0089a0001c0001t0169others(2): Show | a0001c0001t0086g0001 a0001c0001t0089g0001 a0001c0001t0169g0002 others(2): Show |
5 | 394 | 0.0127 | -8 | c.*15 others(19): Show |
SPN | ENSG00000197471.12 | transcript | ENST00000652691.1 | protein_coding | 2/2 | 1589 | INFO_REALIGN_3_PRIME | chr16 | TogoVar | |||||
SPOCK1_chr5_136970298_137504326 | 137084954 | CAAAAAAA others(1): Show |
C | intron_variant | MODIFIER | HG00558.hp1 HG00558.hp2 HG01099.hp1 others(26): Show |
a0001a0002 | a0001c0001a0001c0002a0001c0004others(1): Show | a0001c0001t0001a0001c0001t0002a0001c0001t0003others(18): Show | a0001c0001t0001g0024 a0001c0001t0001g0036 a0001c0001t0002g0117 others(26): Show |
29 | 152 | 0.1908 | -8 | c.475 others(27): Show |
SPOCK1 | ENSG00000152377.15 | transcript | ENST00000394945.6 | protein_coding | 5/10 | chr5 | TogoVar | |||||||
SPOCK1_chr5_136970298_137504326 | 137170587 | TTCTCTCT others(1): Show |
T | intron_variant | MODIFIER | HG00558.hp1 HG00558.hp2 HG02040.hp1 others(21): Show |
a0001 | a0001c0001a0001c0002 | a0001c0001t0001a0001c0001t0002a0001c0001t0003others(11): Show | a0001c0001t0001g0007 a0001c0001t0001g0024 a0001c0001t0002g0117 others(21): Show |
24 | 152 | 0.1579 | -8 | c.233 others(27): Show |
SPOCK1 | ENSG00000152377.15 | transcript | ENST00000394945.6 | protein_coding | 3/10 | chr5 | TogoVar | |||||||
SPOCK1_chr5_136970298_137504326 | 137176502 | ATGTGTGT others(1): Show |
A | intron_variant | MODIFIER | HG00408.hp1 HG00408.hp2 HG01257.hp1 others(50): Show |
a0001 | a0001c0001a0001c0002a0001c0004 | a0001c0001t0001a0001c0001t0002a0001c0001t0003others(20): Show | a0001c0001t0001g0019 a0001c0001t0001g0022 a0001c0001t0001g0029 others(50): Show |
53 | 152 | 0.3487 | -8 | c.233 others(27): Show |
SPOCK1 | ENSG00000152377.15 | transcript | ENST00000394945.6 | protein_coding | 3/10 | chr5 | TogoVar | |||||||
SPOCK1_chr5_136970298_137504326 | 137293089 | ATTTTTTT others(1): Show |
A | intron_variant | MODIFIER | HG00408.hp2 HG02080.hp1 HG02135.hp2 others(26): Show |
a0001 | a0001c0001a0001c0002 | a0001c0001t0001a0001c0001t0002a0001c0001t0004others(9): Show | a0001c0001t0001g0019 a0001c0001t0001g0064 a0001c0001t0001g0072 others(26): Show |
29 | 152 | 0.1908 | -8 | c.187 others(27): Show |
SPOCK1 | ENSG00000152377.15 | transcript | ENST00000394945.6 | protein_coding | 2/10 | chr5 | TogoVar | |||||||
SPOCK1_chr5_136970298_137504326 | 137302579 | AAAATAAA others(1): Show |
A | intron_variant | MODIFIER | HG01496.hp1 HG01516.hp2 HG03486.hp2 others(1): Show |
a0001 | a0001c0001a0001c0002 | a0001c0001t0003a0001c0001t0010a0001c0001t0017others(1): Show | a0001c0001t0003g0081 a0001c0001t0010g0012 a0001c0001t0017g0125 others(1): Show |
4 | 152 | 0.0263 | -8 | c.187 others(27): Show |
SPOCK1 | ENSG00000152377.15 | transcript | ENST00000394945.6 | protein_coding | 2/10 | chr5 | TogoVar | |||||||
SPOCK1_chr5_136970298_137504326 | 137358390 | AAAGGAAG others(1): Show |
A | intron_variant | MODIFIER | HG01884.hp2 HG02723.hp2 HG02896.hp2 others(6): Show |
a0001 | a0001c0001a0001c0002a0001c0004 | a0001c0001t0001a0001c0001t0002a0001c0001t0003others(5): Show | a0001c0001t0001g0035 a0001c0001t0001g0036 a0001c0001t0002g0116 others(6): Show |
9 | 152 | 0.0592 | -8 | c.187 others(27): Show |
SPOCK1 | ENSG00000152377.15 | transcript | ENST00000394945.6 | protein_coding | 2/10 | chr5 | TogoVar | |||||||
SPOCK1_chr5_136970298_137504326 | 137480303 | TCACACAC others(1): Show |
T | intron_variant | MODIFIER | HG01099.hp2 HG02922.hp2 |
a0001 | a0001c0001 | a0001c0001t0004a0001c0001t0011 | a0001c0001t0004g0020 a0001c0001t0011g0115 |
2 | 152 | 0.0132 | -8 | c.186 others(27): Show |
SPOCK1 | ENSG00000152377.15 | transcript | ENST00000394945.6 | protein_coding | 2/10 | chr5 | TogoVar | |||||||
SPOCK3_chr4_166728384_167239494 | 166742234 | CATCTATC others(1): Show |
C | intron_variant | MODIFIER | HG02451.hp1 HG03491.hp2 |
a0001 | a0001c0001a0001c0004 | a0001c0001t0002a0001c0004t0015 | a0001c0001t0002g0027 a0001c0004t0015g0001 |
2 | 144 | 0.0139 | -8 | c.932 others(23): Show |
SPOCK3 | ENSG00000196104.11 | transcript | ENST00000357545.9 | protein_coding | 8/10 | chr4 | TogoVar | |||||||
SPOCK3_chr4_166728384_167239494 | 166752569 | TATATACA others(1): Show |
T | intron_variant | MODIFIER | HG02056.hp2 NA18962.hp2 |
a0001 | a0001c0001 | a0001c0001t0001a0001c0001t0013 | a0001c0001t0001g0055 a0001c0001t0013g0100 |
2 | 144 | 0.0139 | -8 | c.931 others(25): Show |
SPOCK3 | ENSG00000196104.11 | transcript | ENST00000357545.9 | protein_coding | 8/10 | chr4 | TogoVar | |||||||
SPOCK3_chr4_166728384_167239494 | 166752571 | TATACACA others(1): Show |
T | intron_variant | MODIFIER | HG02280.hp2 HG02976.hp2 HG03139.hp1 others(1): Show |
a0001 | a0001c0001a0001c0007 | a0001c0001t0001a0001c0007t0001 | a0001c0001t0001g0015 a0001c0001t0001g0046 a0001c0001t0001g0056 others(1): Show |
4 | 144 | 0.0278 | -8 | c.931 others(25): Show |
SPOCK3 | ENSG00000196104.11 | transcript | ENST00000357545.9 | protein_coding | 8/10 | chr4 | TogoVar | |||||||
SPOCK3_chr4_166728384_167239494 | 166899242 | ATATCTAT others(1): Show |
A | intron_variant | MODIFIER | HG01361.hp2 HG02683.hp1 NA18971.hp1 |
a0001 | a0001c0001a0001c0002 | a0001c0001t0002a0001c0001t0003a0001c0002t0001 | a0001c0001t0002g0063 a0001c0001t0003g0110 a0001c0002t0001g0080 |
3 | 144 | 0.0208 | -8 | c.475 others(26): Show |
SPOCK3 | ENSG00000196104.11 | transcript | ENST00000357545.9 | protein_coding | 5/10 | chr4 | TogoVar | |||||||
SPOCK3_chr4_166728384_167239494 | 166991343 | ATATTTAT others(1): Show |
A | intron_variant | MODIFIER | HG00642.hp1 HG02280.hp2 HG02622.hp1 others(2): Show |
a0001 | a0001c0001a0001c0009 | a0001c0001t0001a0001c0001t0002a0001c0001t0003others(1): Show | a0001c0001t0001g0015 a0001c0001t0001g0046 a0001c0001t0002g0009 others(2): Show |
5 | 144 | 0.0347 | -8 | c.350 others(25): Show |
SPOCK3 | ENSG00000196104.11 | transcript | ENST00000357545.9 | protein_coding | 4/10 | chr4 | TogoVar | |||||||
SPOCK3_chr4_166728384_167239494 | 167030083 | TTCTATCT others(1): Show |
T | intron_variant | MODIFIER | HG02615.hp1 HG03579.hp2 NA18948.hp2 |
a0001 | a0001c0001a0001c0004 | a0001c0001t0001a0001c0001t0002a0001c0004t0003 | a0001c0001t0001g0109 a0001c0001t0002g0090 a0001c0004t0003g0008 |
3 | 144 | 0.0208 | -8 | c.236 others(27): Show |
SPOCK3 | ENSG00000196104.11 | transcript | ENST00000357545.9 | protein_coding | 3/10 | chr4 | TogoVar | |||||||
SPOCK3_chr4_166728384_167239494 | 167038663 | CAAAAAAA others(1): Show |
C | intron_variant | MODIFIER | HG00140.hp2 HG00558.hp2 HG00738.hp2 others(37): Show |
a0001a0002 | a0001c0001a0001c0002a0001c0004others(4): Show | a0001c0001t0001a0001c0001t0002a0001c0001t0003others(14): Show | a0001c0001t0001g0018 a0001c0001t0001g0032 a0001c0001t0001g0055 others(37): Show |
40 | 144 | 0.2778 | -8 | c.235 others(27): Show |
SPOCK3 | ENSG00000196104.11 | transcript | ENST00000357545.9 | protein_coding | 3/10 | chr4 | TogoVar | |||||||
SPOCK3_chr4_166728384_167239494 | 167078308 | CTGTGTGT others(1): Show |
C | intron_variant | MODIFIER | HG00642.hp1 HG00738.hp1 HG01981.hp1 others(8): Show |
a0001 | a0001c0001a0001c0009 | a0001c0001t0001a0001c0001t0002a0001c0001t0004others(2): Show | a0001c0001t0001g0056 a0001c0001t0001g0144 a0001c0001t0002g0029 others(8): Show |
11 | 144 | 0.0764 | -8 | c.190 others(27): Show |
SPOCK3 | ENSG00000196104.11 | transcript | ENST00000357545.9 | protein_coding | 2/10 | chr4 | TogoVar | |||||||
SPOCK3_chr4_166728384_167239494 | 167199225 | TTGTGTGT others(1): Show |
T | intron_variant | MODIFIER | HG01261.hp1 HG02257.hp1 HG02683.hp1 others(1): Show |
a0001a0003 | a0001c0001a0001c0002a0003c0006 | a0001c0001t0001a0001c0001t0014a0001c0002t0001others(1): Show | a0001c0001t0001g0066 a0001c0001t0014g0062 a0001c0002t0001g0080 others(1): Show |
4 | 144 | 0.0278 | -8 | c.189 others(27): Show |
SPOCK3 | ENSG00000196104.11 | transcript | ENST00000357545.9 | protein_coding | 2/10 | chr4 | TogoVar | |||||||
SPOCK3_chr4_166728384_167239494 | 167222807 | GAATATAT others(1): Show |
G | intron_variant | MODIFIER | HG00642.hp1 HG02622.hp2 HG02976.hp1 others(3): Show |
a0001 | a0001c0001a0001c0009 | a0001c0001t0002a0001c0001t0003a0001c0009t0004 | a0001c0001t0002g0020 a0001c0001t0002g0022 a0001c0001t0003g0021 others(3): Show |
6 | 144 | 0.0417 | -8 | c.189 others(27): Show |
SPOCK3 | ENSG00000196104.11 | transcript | ENST00000357545.9 | protein_coding | 2/10 | chr4 | TogoVar | |||||||
SPON1_chr11_13957723_14273133 | 14090823 | GGCCCCCC others(1): Show |
G | intron_variant | MODIFIER | HG02258.hp1 HG03209.hp2 HG03492.hp1 others(7): Show |
a0001 | a0001c0001a0001c0002a0001c0003others(1): Show | a0001c0001t0001a0001c0001t0006a0001c0002t0001others(3): Show | a0001c0001t0001g0001 a0001c0001t0001g0030 a0001c0001t0001g0032 others(7): Show |
10 | 224 | 0.0446 | -8 | c.676 others(27): Show |
SPON1 | ENSG00000262655.4 | transcript | ENST00000576479.4 | protein_coding | 5/15 | chr11 | TogoVar | |||||||
SPON1_chr11_13957723_14273133 | 14095404 | CTAGATAG others(1): Show |
C | intron_variant | MODIFIER | HG00280.hp2 HG01496.hp2 HG01952.hp2 others(11): Show |
a0001 | a0001c0001a0001c0002a0001c0004 | a0001c0001t0003a0001c0001t0014a0001c0001t0015others(4): Show | a0001c0001t0003g0189 a0001c0001t0003g0198 a0001c0001t0014g0019 others(11): Show |
14 | 224 | 0.0625 | -8 | c.676 others(27): Show |
SPON1 | ENSG00000262655.4 | transcript | ENST00000576479.4 | protein_coding | 5/15 | INFO_REALIGN_3_PRIME | chr11 | TogoVar | ||||||
SPON1_chr11_13957723_14273133 | 14160752 | TTATATAT others(1): Show |
T | intron_variant | MODIFIER | HG01978.hp1 HG02630.hp2 HG02809.hp1 others(5): Show |
a0001 | a0001c0001a0001c0002a0001c0004others(1): Show | a0001c0001t0001a0001c0001t0002a0001c0001t0007others(3): Show | a0001c0001t0001g0141 a0001c0001t0002g0147 a0001c0001t0007g0210 others(5): Show |
8 | 224 | 0.0357 | -8 | c.825 others(27): Show |
SPON1 | ENSG00000262655.4 | transcript | ENST00000576479.4 | protein_coding | 6/15 | INFO_REALIGN_3_PRIME | chr11 | TogoVar | ||||||
SPON1_chr11_13957723_14273133 | 14160863 | ATATATTT others(1): Show |
A | intron_variant | MODIFIER | HG02630.hp2 HG02809.hp1 |
a0001 | a0001c0002 | a0001c0002t0001 | a0001c0002t0001g0039 a0001c0002t0001g0159 |
2 | 224 | 0.0089 | -8 | c.825 others(27): Show |
SPON1 | ENSG00000262655.4 | transcript | ENST00000576479.4 | protein_coding | 6/15 | INFO_REALIGN_3_PRIME | chr11 | TogoVar | ||||||
SPON1_chr11_13957723_14273133 | 14160909 | ATATATAT others(1): Show |
A | intron_variant | MODIFIER | HG02280.hp2 HG02965.hp2 NA18906.hp1 |
a0001 | a0001c0001a0001c0003 | a0001c0001t0001a0001c0003t0001 | a0001c0001t0001g0032 a0001c0001t0001g0042 a0001c0003t0001g0115 |
3 | 224 | 0.0134 | -8 | c.825 others(27): Show |
SPON1 | ENSG00000262655.4 | transcript | ENST00000576479.4 | protein_coding | 6/15 | INFO_REALIGN_3_PRIME | chr11 | TogoVar | ||||||
SPON1_chr11_13957723_14273133 | 14160937 | ATATATAT others(1): Show |
A | intron_variant | MODIFIER | HG00408.hp2 HG01496.hp2 HG02071.hp2 others(19): Show |
a0001a0002 | a0001c0001a0001c0002a0001c0003others(2): Show | a0001c0001t0003a0001c0002t0001a0001c0002t0011others(5): Show | a0001c0001t0003g0187 a0001c0001t0003g0189 a0001c0002t0001g0052 others(19): Show |
22 | 224 | 0.0982 | -8 | c.825 others(27): Show |
SPON1 | ENSG00000262655.4 | transcript | ENST00000576479.4 | protein_coding | 6/15 | INFO_REALIGN_3_PRIME | chr11 | TogoVar | ||||||
SPON1_chr11_13957723_14273133 | 14160993 | TTTTATAT others(1): Show |
T | intron_variant | MODIFIER | HG02886.hp2 HG03579.hp1 NA20300.hp2 |
a0001 | a0001c0001a0001c0002 | a0001c0001t0001a0001c0001t0004a0001c0002t0003 | a0001c0001t0001g0017 a0001c0001t0004g0200 a0001c0002t0003g0201 |
3 | 224 | 0.0134 | -8 | c.825 others(27): Show |
SPON1 | ENSG00000262655.4 | transcript | ENST00000576479.4 | protein_coding | 6/15 | INFO_REALIGN_3_PRIME | chr11 | TogoVar | ||||||
SPON1_chr11_13957723_14273133 | 14194528 | TCACACAC others(1): Show |
T | intron_variant | MODIFIER | NA19007.hp2 NA19074.hp2 |
a0001 | a0001c0001 | a0001c0001t0001 | a0001c0001t0001g0060 a0001c0001t0001g0061 |
2 | 224 | 0.0089 | -8 | c.826 others(27): Show |
SPON1 | ENSG00000262655.4 | transcript | ENST00000576479.4 | protein_coding | 6/15 | INFO_REALIGN_3_PRIME | chr11 | TogoVar | ||||||
SPON1_chr11_13957723_14273133 | 14197488 | AAAATAAA others(1): Show |
A | intron_variant | MODIFIER | HG02486.hp1 HG02622.hp1 HG02723.hp1 |
a0001 | a0001c0001a0001c0003a0001c0011 | a0001c0001t0001a0001c0003t0001a0001c0011t0001 | a0001c0001t0001g0028 a0001c0003t0001g0101 a0001c0011t0001g0111 |
3 | 224 | 0.0134 | -8 | c.826 others(27): Show |
SPON1 | ENSG00000262655.4 | transcript | ENST00000576479.4 | protein_coding | 6/15 | INFO_REALIGN_3_PRIME | chr11 | TogoVar | ||||||
SPON1_chr11_13957723_14273133 | 14200814 | TAAAAAAA others(1): Show |
T | intron_variant | MODIFIER | HG01516.hp1 HG01891.hp1 HG02735.hp2 others(4): Show |
a0001a0002 | a0001c0001a0001c0002a0001c0004others(1): Show | a0001c0001t0002a0001c0001t0003a0001c0002t0001others(2): Show | a0001c0001t0002g0009 a0001c0001t0003g0193 a0001c0002t0001g0040 others(4): Show |
7 | 224 | 0.0313 | -8 | c.826 others(27): Show |
SPON1 | ENSG00000262655.4 | transcript | ENST00000576479.4 | protein_coding | 6/15 | INFO_REALIGN_3_PRIME | chr11 | TogoVar | ||||||
SPON1_chr11_13957723_14273133 | 14229951 | CGTGTGTG others(1): Show |
C | intron_variant | MODIFIER | HG01081.hp1 HG01243.hp1 HG01515.hp2 others(11): Show |
a0001 | a0001c0001a0001c0002a0001c0004 | a0001c0001t0002a0001c0001t0019a0001c0002t0001others(2): Show | a0001c0001t0002g0009 a0001c0001t0019g0218 a0001c0002t0001g0010 others(11): Show |
14 | 224 | 0.0625 | -8 | c.826 others(27): Show |
SPON1 | ENSG00000262655.4 | transcript | ENST00000576479.4 | protein_coding | 6/15 | INFO_REALIGN_3_PRIME | chr11 | TogoVar | ||||||
SPON1_chr11_13957723_14273133 | 14240589 | TTGTGTGT others(1): Show |
T | intron_variant | MODIFIER | HG03490.hp2 HG03492.hp1 |
a0001 | a0001c0003 | a0001c0003t0008 | a0001c0003t0008g0091 a0001c0003t0008g0092 |
2 | 224 | 0.0089 | -8 | c.826 others(25): Show |
SPON1 | ENSG00000262655.4 | transcript | ENST00000576479.4 | protein_coding | 6/15 | INFO_REALIGN_3_PRIME | chr11 | TogoVar | ||||||
SPON1_chr11_13957723_14273133 | 14250334 | GATCTGGT others(1): Show |
G | intron_variant | MODIFIER | HG01257.hp1 HG01978.hp2 |
a0001 | a0001c0002 | a0001c0002t0001 | a0001c0002t0001g0125 a0001c0002t0001g0127 |
2 | 224 | 0.0089 | -8 | c.891 others(25): Show |
SPON1 | ENSG00000262655.4 | transcript | ENST00000576479.4 | protein_coding | 7/15 | INFO_REALIGN_3_PRIME | chr11 | TogoVar | ||||||
SPON2_chr4_1161932_1177583 | 1163000 | TGTTTTTT others(1): Show |
T | downstream_gene_variant | MODIFIER | HG00642.hp2 HG00735.hp1 HG01099.hp2 others(20): Show |
a0003 | a0003c0004 | a0003c0004t0001 | a0003c0004t0001g0004 a0003c0004t0001g0023 a0003c0004t0001g0033 others(3): Show |
23 | 432 | 0.0532 | -8 | c.*44 others(19): Show |
SPON2 | ENSG00000159674.12 | transcript | ENST00000290902.10 | protein_coding | 3931 | chr4 | TogoVar | |||||||
SPON2_chr4_1161932_1177583 | 1169760 | TGAGACCC others(1): Show |
T | intron_variant | MODIFIER | HG01884.hp1 HG01891.hp1 HG02572.hp2 others(3): Show |
a0002 | a0002c0003 | a0002c0003t0001 | a0002c0003t0001g0011 | 6 | 432 | 0.0139 | -8 | c.811 others(23): Show |
SPON2 | ENSG00000159674.12 | transcript | ENST00000290902.10 | protein_coding | 5/5 | chr4 | TogoVar | |||||||
SPOPL_chr2_138496770_138578547 | 138529498 | CTGTGTGT others(1): Show |
C | intron_variant | MODIFIER | HG00099.hp1 HG00099.hp2 HG00280.hp1 others(75): Show |
a0001 | a0001c0001 | a0001c0001t0001a0001c0001t0002a0001c0001t0014others(4): Show | a0001c0001t0001g0009 a0001c0001t0001g0010 a0001c0001t0001g0021 others(72): Show |
78 | 372 | 0.2097 | -8 | c.-60 others(27): Show |
SPOPL | ENSG00000144228.9 | transcript | ENST00000280098.9 | protein_coding | 1/10 | INFO_REALIGN_3_PRIME | chr2 | TogoVar | ||||||
SPOPL_chr2_138496770_138578547 | 138567372 | AGTGTGTG others(1): Show |
A | intron_variant | MODIFIER | HG00099.hp2 HG00323.hp1 HG00558.hp2 others(34): Show |
a0001 | a0001c0001a0001c0002 | a0001c0001t0001a0001c0001t0003a0001c0001t0004others(9): Show | a0001c0001t0001g0027 a0001c0001t0001g0075 a0001c0001t0001g0107 others(33): Show |
37 | 372 | 0.0995 | -8 | c.103 others(27): Show |
SPOPL | ENSG00000144228.9 | transcript | ENST00000280098.9 | protein_coding | 10/10 | INFO_REALIGN_3_PRIME | chr2 | TogoVar | ||||||
SPOP_chr17_49593884_49683097 | 49606488 | CTTTTTTC others(1): Show |
C | intron_variant | MODIFIER | HG02145.hp1 HG02723.hp2 HG02809.hp2 others(10): Show |
a0001 | a0001c0001 | a0001c0001t0008a0001c0001t0011a0001c0001t0015 | a0001c0001t0008g0004 a0001c0001t0008g0191 a0001c0001t0008g0246 others(9): Show |
13 | 390 | 0.0333 | -8 | c.837 others(23): Show |
SPOP | ENSG00000121067.19 | transcript | ENST00000504102.6 | protein_coding | 8/9 | chr17 | TogoVar | |||||||
SPOP_chr17_49593884_49683097 | 49614802 | AGTGTGTG others(1): Show |
A | intron_variant | MODIFIER | HG00673.hp2 HG01934.hp2 HG02280.hp2 others(12): Show |
a0001 | a0001c0001 | a0001c0001t0001a0001c0001t0003a0001c0001t0005others(4): Show | a0001c0001t0001g0384 a0001c0001t0003g0335 a0001c0001t0003g0347 others(12): Show |
15 | 390 | 0.0385 | -8 | c.481 others(25): Show |
SPOP | ENSG00000121067.19 | transcript | ENST00000504102.6 | protein_coding | 5/9 | chr17 | TogoVar | |||||||
SPOP_chr17_49593884_49683097 | 49624331 | GCACACAC others(1): Show |
G | intron_variant | MODIFIER | HG01433.hp1 HG02080.hp2 HG02647.hp2 others(2): Show |
a0001 | a0001c0001 | a0001c0001t0006a0001c0001t0010 | a0001c0001t0006g0013 a0001c0001t0006g0018 a0001c0001t0006g0037 others(2): Show |
5 | 390 | 0.0128 | -8 | c.-66 others(25): Show |
SPOP | ENSG00000121067.19 | transcript | ENST00000504102.6 | protein_coding | 1/9 | chr17 | TogoVar | |||||||
SPOP_chr17_49593884_49683097 | 49665649 | GACACACA others(1): Show |
G | intron_variant | MODIFIER | HG01993.hp2 HG02809.hp1 HG02965.hp2 others(3): Show |
a0001 | a0001c0001 | a0001c0001t0001a0001c0001t0002a0001c0001t0003others(1): Show | a0001c0001t0001g0355 a0001c0001t0001g0356 a0001c0001t0001g0357 others(3): Show |
6 | 390 | 0.0154 | -8 | c.-67 others(27): Show |
SPOP | ENSG00000121067.19 | transcript | ENST00000504102.6 | protein_coding | 1/9 | chr17 | TogoVar | |||||||
SPOP_chr17_49593884_49683097 | 49666448 | GACACACA others(1): Show |
G | intron_variant | MODIFIER | HG00140.hp2 HG00323.hp1 HG00609.hp2 others(105): Show |
a0001 | a0001c0001 | a0001c0001t0001a0001c0001t0002a0001c0001t0004others(9): Show | a0001c0001t0001g0060 a0001c0001t0001g0097 a0001c0001t0001g0100 others(103): Show |
108 | 390 | 0.2769 | -8 | c.-67 others(27): Show |
SPOP | ENSG00000121067.19 | transcript | ENST00000504102.6 | protein_coding | 1/9 | chr17 | TogoVar | |||||||
SPOP_chr17_49593884_49683097 | 49679560 | AAAATAAA others(1): Show |
A | upstream_gene_variant | MODIFIER | HG01891.hp2 HG02280.hp2 HG02698.hp2 others(1): Show |
a0001 | a0001c0001 | a0001c0001t0003a0001c0001t0017 | a0001c0001t0003g0307 a0001c0001t0017g0316 a0001c0001t0017g0328 others(1): Show |
4 | 390 | 0.0103 | -8 | c.-17 others(19): Show |
SPOP | ENSG00000121067.19 | transcript | ENST00000504102.6 | protein_coding | 1464 | chr17 | TogoVar | |||||||
SPP2_chr2_234045702_234082134 | 234067777 | CAAAAAAA others(1): Show |
C | intron_variant | MODIFIER | HG00099.hp2 HG00423.hp2 HG00438.hp2 others(79): Show |
a0001a0002 | a0001c0001a0001c0002a0002c0003 | a0001c0001t0001a0001c0001t0006a0001c0002t0001others(1): Show | a0001c0001t0001g0003 a0001c0001t0001g0017 a0001c0001t0001g0018 others(40): Show |
82 | 434 | 0.1889 | -8 | c.550 others(23): Show |
SPP2 | ENSG00000072080.11 | transcript | ENST00000168148.8 | protein_coding | 6/7 | INFO_REALIGN_3_PRIME | chr2 | TogoVar | ||||||
SPPL2A_chr15_50697266_50770706 | 50698903 | CTTTTTTT others(1): Show |
C | downstream_gene_variant | MODIFIER | HG00673.hp2 HG01167.hp2 HG01169.hp2 others(7): Show |
a0001a0004 | a0001c0001a0004c0005 | a0001c0001t0003a0001c0001t0004a0001c0001t0017others(5): Show | a0001c0001t0003g0284 a0001c0001t0004g0316 a0001c0001t0017g0307 others(7): Show |
10 | 336 | 0.0298 | -8 | c.*88 others(19): Show |
SPPL2A | ENSG00000138600.11 | transcript | ENST00000261854.10 | protein_coding | 3362 | chr15 | TogoVar | |||||||
SPPL2A_chr15_50697266_50770706 | 50746436 | CAAAAAAA others(1): Show |
C | intron_variant | MODIFIER | HG01109.hp2 HG01255.hp1 HG01496.hp2 others(40): Show |
a0001 | a0001c0001a0001c0003 | a0001c0001t0001a0001c0001t0003a0001c0001t0004others(25): Show | a0001c0001t0001g0065 a0001c0001t0001g0159 a0001c0001t0001g0164 others(38): Show |
43 | 336 | 0.1280 | -8 | c.584 others(25): Show |
SPPL2A | ENSG00000138600.11 | transcript | ENST00000261854.10 | protein_coding | 5/14 | chr15 | TogoVar | |||||||
SPPL2A_chr15_50697266_50770706 | 50758886 | ATATCTAT others(1): Show |
A | intron_variant | MODIFIER | HG00423.hp1 HG00544.hp1 HG01167.hp1 others(22): Show |
a0001a0004 | a0001c0001a0004c0005 | a0001c0001t0002a0001c0001t0003a0001c0001t0016others(16): Show | a0001c0001t0002g0222 a0001c0001t0002g0223 a0001c0001t0003g0007 others(21): Show |
25 | 336 | 0.0744 | -8 | c.66+ others(23): Show |
SPPL2A | ENSG00000138600.11 | transcript | ENST00000261854.10 | protein_coding | 1/14 | chr15 | TogoVar | |||||||
SPPL2A_chr15_50697266_50770706 | 50769368 | TAAAAAAA others(1): Show |
T | upstream_gene_variant | MODIFIER | HG01167.hp1 HG02145.hp1 HG02615.hp2 others(5): Show |
a0001 | a0001c0001 | a0001c0001t0028a0001c0001t0032a0001c0001t0049others(4): Show | a0001c0001t0028g0157 a0001c0001t0032g0235 a0001c0001t0032g0236 others(5): Show |
8 | 336 | 0.0238 | -8 | c.-38 others(19): Show |
SPPL2A | ENSG00000138600.11 | transcript | ENST00000261854.10 | protein_coding | 3663 | chr15 | TogoVar | |||||||
SPPL2B_chr19_2323684_2360095 | 2357420 | TCATCCAT others(1): Show |
T | downstream_gene_variant | MODIFIER | HG00099.hp1 HG00323.hp1 HG00323.hp2 others(177): Show |
a0001a0003a0004others(8): Show | a0001c0001a0001c0002a0001c0003others(20): Show | a0001c0001t0001a0001c0001t0002a0001c0001t0003others(30): Show | a0001c0001t0001g0024 a0001c0001t0001g0025 a0001c0001t0001g0108 others(138): Show |
180 | 414 | 0.4348 | -8 | c.*42 others(19): Show |
SPPL2B | ENSG00000005206.17 | transcript | ENST00000613503.5 | protein_coding | 2326 | chr19 | TogoVar | |||||||
SPPL2B_chr19_2323684_2360095 | 2357479 | CCCAACCA others(1): Show |
C | downstream_gene_variant | MODIFIER | HG01891.hp1 HG02004.hp2 HG02572.hp2 others(2): Show |
a0002 | a0002c0011 | a0002c0011t0009a0002c0011t0018 | a0002c0011t0009g0165 a0002c0011t0009g0168 a0002c0011t0009g0177 others(2): Show |
5 | 414 | 0.0121 | -8 | c.*42 others(19): Show |
SPPL2B | ENSG00000005206.17 | transcript | ENST00000613503.5 | protein_coding | 2385 | chr19 | TogoVar | |||||||
SPPL2B_chr19_2323684_2360095 | 2357568 | CCATCCAT others(1): Show |
C | downstream_gene_variant | MODIFIER | HG03225.hp1 NA18945.hp2 NA18963.hp1 others(5): Show |
a0001 | a0001c0001a0001c0004 | a0001c0001t0002a0001c0004t0001 | a0001c0001t0002g0008 a0001c0001t0002g0017 a0001c0001t0002g0283 others(2): Show |
8 | 414 | 0.0193 | -8 | c.*43 others(19): Show |
SPPL2B | ENSG00000005206.17 | transcript | ENST00000613503.5 | protein_coding | 2474 | chr19 | TogoVar | |||||||
SPPL3_chr12_120757510_120909358 | 120766098 | GCGCACAC others(1): Show |
G | intron_variant | MODIFIER | HG00408.hp1 HG00621.hp1 HG01943.hp1 others(28): Show |
a0001 | a0001c0001a0001c0002 | a0001c0001t0005a0001c0001t0012a0001c0002t0005others(3): Show | a0001c0001t0005g0080 a0001c0001t0012g0131 a0001c0002t0005g0077 others(28): Show |
31 | 320 | 0.0969 | -8 | c.108 others(25): Show |
SPPL3 | ENSG00000157837.16 | transcript | ENST00000353487.7 | protein_coding | 10/10 | chr12 | TogoVar |