view | regionname | pos | ref | alt | annotation | impact | samples | ahapids | chapids | thapids | thapids | ac | an | af | len | hgvs_c | hgvs_p | genename | geneid | featuretype | featureid | transcript_biotype | rank | cdna cdna pos length
|
cds cds pos length
|
aa aa pos length
|
distance | status | chr | external |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
SPTBN1_chr2_54451327_54676446 | 54468315 | TAAAATAA others(1): Show |
T | intron_variant | MODIFIER | HG01255.hp1 HG02622.hp1 NA20752.hp1 |
a0001 | a0001c0001 | a0001c0001t0002a0001c0001t0039 | a0001c0001t0002g0163 a0001c0001t0002g0210 a0001c0001t0039g0058 |
3 | 370 | 0.0081 | -8 | c.-48 others(27): Show |
SPTBN1 | ENSG00000115306.17 | transcript | ENST00000356805.9 | protein_coding | 1/35 | INFO_REALIGN_3_PRIME | chr2 | TogoVar | ||||||
SPTBN1_chr2_54451327_54676446 | 54481391 | AGTGTGTG others(1): Show |
A | intron_variant | MODIFIER | HG00323.hp1 HG01071.hp2 HG01081.hp2 others(26): Show |
a0001a0002 | a0001c0001a0001c0002a0001c0003others(3): Show | a0001c0001t0005a0001c0001t0007a0001c0001t0014others(12): Show | a0001c0001t0005g0353 a0001c0001t0007g0196 a0001c0001t0014g0097 others(26): Show |
29 | 370 | 0.0784 | -8 | c.-48 others(27): Show |
SPTBN1 | ENSG00000115306.17 | transcript | ENST00000356805.9 | protein_coding | 1/35 | INFO_REALIGN_3_PRIME | chr2 | TogoVar | ||||||
SPTBN1_chr2_54451327_54676446 | 54506123 | CTAAATAA others(1): Show |
C | intron_variant | MODIFIER | HG01884.hp2 HG02280.hp2 HG02300.hp1 others(3): Show |
a0001 | a0001c0001a0001c0002a0001c0003others(1): Show | a0001c0001t0019a0001c0001t0050a0001c0002t0001others(2): Show | a0001c0001t0019g0241 a0001c0001t0050g0242 a0001c0002t0001g0274 others(3): Show |
6 | 370 | 0.0162 | -8 | c.-47 others(27): Show |
SPTBN1 | ENSG00000115306.17 | transcript | ENST00000356805.9 | protein_coding | 1/35 | INFO_REALIGN_3_PRIME | chr2 | TogoVar | ||||||
SPTBN1_chr2_54451327_54676446 | 54533349 | AGTGTGTG others(1): Show |
A | intron_variant | MODIFIER | HG01978.hp2 HG02451.hp1 HG02486.hp2 others(8): Show |
a0001 | a0001c0001a0001c0004a0001c0005others(2): Show | a0001c0001t0002a0001c0004t0010a0001c0005t0008others(3): Show | a0001c0001t0002g0210 a0001c0004t0010g0175 a0001c0005t0008g0041 others(8): Show |
11 | 370 | 0.0297 | -8 | c.148 others(25): Show |
SPTBN1 | ENSG00000115306.17 | transcript | ENST00000356805.9 | protein_coding | 2/35 | INFO_REALIGN_3_PRIME | chr2 | TogoVar | ||||||
SPTBN1_chr2_54451327_54676446 | 54533900 | TCACACAC others(1): Show |
T | intron_variant | MODIFIER | HG00099.hp1 HG00140.hp2 HG00280.hp1 others(51): Show |
a0001a0002a0003others(1): Show | a0001c0002a0001c0003a0001c0011others(5): Show | a0001c0002t0001a0001c0002t0004a0001c0003t0003others(14): Show | a0001c0002t0001g0117 a0001c0002t0004g0101 a0001c0003t0003g0036 others(51): Show |
54 | 370 | 0.1460 | -8 | c.148 others(25): Show |
SPTBN1 | ENSG00000115306.17 | transcript | ENST00000356805.9 | protein_coding | 2/35 | INFO_REALIGN_3_PRIME | chr2 | TogoVar | ||||||
SPTBN1_chr2_54451327_54676446 | 54566185 | CTTTTTTT others(1): Show |
C | intron_variant | MODIFIER | HG02486.hp2 HG02559.hp1 HG02572.hp1 others(4): Show |
a0001 | a0001c0005 | a0001c0005t0008a0001c0005t0011a0001c0005t0021 | a0001c0005t0008g0041 a0001c0005t0011g0038 a0001c0005t0011g0051 others(4): Show |
7 | 370 | 0.0189 | -8 | c.149 others(27): Show |
SPTBN1 | ENSG00000115306.17 | transcript | ENST00000356805.9 | protein_coding | 2/35 | INFO_REALIGN_3_PRIME | chr2 | TogoVar | ||||||
SPTBN1_chr2_54451327_54676446 | 54571687 | ATAGTGTG others(1): Show |
A | intron_variant | MODIFIER | HG00099.hp1 HG00140.hp2 HG00280.hp1 others(121): Show |
a0001a0002a0003others(2): Show | a0001c0001a0001c0003a0001c0005others(13): Show | a0001c0001t0003a0001c0001t0007a0001c0001t0018others(37): Show | a0001c0001t0003g0059 a0001c0001t0003g0060 a0001c0001t0003g0061 others(121): Show |
124 | 370 | 0.3351 | -8 | c.149 others(27): Show |
SPTBN1 | ENSG00000115306.17 | transcript | ENST00000356805.9 | protein_coding | 2/35 | INFO_REALIGN_3_PRIME | chr2 | TogoVar | ||||||
SPTBN1_chr2_54451327_54676446 | 54673059 | GGTGTGTG others(1): Show |
G | downstream_gene_variant | MODIFIER | HG00140.hp1 HG00280.hp2 HG00323.hp1 others(158): Show |
a0001a0004a0005others(5): Show | a0001c0001a0001c0002a0001c0003others(17): Show | a0001c0001t0004a0001c0001t0007a0001c0001t0010others(34): Show | a0001c0001t0004g0001 a0001c0001t0004g0070 a0001c0001t0004g0091 others(158): Show |
161 | 370 | 0.4351 | -8 | c.*44 others(19): Show |
SPTBN1 | ENSG00000115306.17 | transcript | ENST00000356805.9 | protein_coding | 1614 | chr2 | TogoVar | |||||||
SPTBN4_chr19_40462001_40581464 | 40479675 | CATATATA others(1): Show |
C | intron_variant | MODIFIER | HG01255.hp1 HG02135.hp2 NA18948.hp2 others(3): Show |
a0001a0003 | a0001c0001a0001c0002a0001c0012others(1): Show | a0001c0001t0001a0001c0002t0001a0001c0012t0001others(1): Show | a0001c0001t0001g0066 a0001c0001t0001g0067 a0001c0002t0001g0159 others(3): Show |
6 | 234 | 0.0256 | -8 | c.169 others(25): Show |
SPTBN4 | ENSG00000160460.17 | transcript | ENST00000598249.6 | protein_coding | 2/35 | INFO_REALIGN_3_PRIME | chr19 | TogoVar | ||||||
SPTBN4_chr19_40462001_40581464 | 40498373 | TTTTATTT others(1): Show |
T | intron_variant | MODIFIER | HG00099.hp2 HG00140.hp1 HG00741.hp2 others(31): Show |
a0001a0002a0003others(6): Show | a0001c0001a0001c0002a0001c0010others(15): Show | a0001c0001t0001a0001c0002t0001a0001c0002t0002others(17): Show | a0001c0001t0001g0225 a0001c0002t0001g0017 a0001c0002t0001g0022 others(31): Show |
34 | 234 | 0.1453 | -8 | c.784 others(23): Show |
SPTBN4 | ENSG00000160460.17 | transcript | ENST00000598249.6 | protein_coding | 7/35 | INFO_REALIGN_3_PRIME | chr19 | TogoVar | ||||||
SPTBN4_chr19_40462001_40581464 | 40505700 | GAGGAAGG others(1): Show |
G | intron_variant | MODIFIER | HG01175.hp1 HG01255.hp1 HG01496.hp2 others(5): Show |
a0001a0003a0005others(1): Show | a0001c0001a0001c0002a0003c0005others(2): Show | a0001c0001t0001a0001c0002t0005a0003c0005t0001others(2): Show | a0001c0001t0001g0013 a0001c0001t0001g0019 a0001c0001t0001g0204 others(5): Show |
8 | 234 | 0.0342 | -8 | c.166 others(25): Show |
SPTBN4 | ENSG00000160460.17 | transcript | ENST00000598249.6 | protein_coding | 12/35 | INFO_REALIGN_3_PRIME | chr19 | TogoVar | ||||||
SPTBN4_chr19_40462001_40581464 | 40569936 | CCACACAC others(1): Show |
C | intron_variant | MODIFIER | HG00099.hp2 HG00621.hp1 HG00621.hp2 others(75): Show |
a0001a0002a0004others(5): Show | a0001c0001a0001c0002a0001c0008others(16): Show | a0001c0001t0001a0001c0001t0006a0001c0002t0001others(20): Show | a0001c0001t0001g0013 a0001c0001t0001g0019 a0001c0001t0001g0031 others(75): Show |
78 | 234 | 0.3333 | -8 | c.702 others(25): Show |
SPTBN4 | ENSG00000160460.17 | transcript | ENST00000598249.6 | protein_coding | 32/35 | INFO_REALIGN_3_PRIME | chr19 | TogoVar | ||||||
SPTBN4_chr19_40462001_40581464 | 40577948 | TACACACA others(1): Show |
T | downstream_gene_variant | MODIFIER | HG03927.hp1 HG04199.hp2 NA18970.hp2 others(2): Show |
a0001a0003 | a0001c0002a0003c0006 | a0001c0002t0001a0001c0002t0002a0003c0006t0001others(1): Show | a0001c0002t0001g0076 a0001c0002t0002g0183 a0003c0006t0001g0084 others(2): Show |
5 | 234 | 0.0214 | -8 | c.*23 others(19): Show |
SPTBN4 | ENSG00000160460.17 | transcript | ENST00000598249.6 | protein_coding | 1485 | chr19 | TogoVar | |||||||
SPTB_chr14_64741283_64884907 | 64824700 | TCTGACAC others(1): Show |
T | intron_variant | MODIFIER | HG01192.hp2 HG01243.hp2 HG02055.hp2 others(2): Show |
a0004a0016 | a0004c0019a0004c0051a0016c0050 | a0004c0019t0001a0004c0051t0001a0016c0050t0017 | a0004c0019t0001g0042 a0004c0019t0001g0044 a0004c0019t0001g0045 others(2): Show |
5 | 268 | 0.0187 | -8 | c.-51 others(25): Show |
SPTB | ENSG00000070182.21 | transcript | ENST00000644917.1 | protein_coding | 1/35 | chr14 | TogoVar | |||||||
SPTB_chr14_64741283_64884907 | 64859714 | CTCTCTCT others(1): Show |
C | intron_variant | MODIFIER | HG03017.hp2 HG03540.hp1 NA18942.hp1 |
a0002a0003 | a0002c0007a0002c0032a0003c0047 | a0002c0007t0001a0002c0032t0001a0003c0047t0032 | a0002c0007t0001g0136 a0002c0032t0001g0020 a0003c0047t0032g0260 |
3 | 268 | 0.0112 | -8 | c.-52 others(27): Show |
SPTB | ENSG00000070182.21 | transcript | ENST00000644917.1 | protein_coding | 1/35 | chr14 | TogoVar | |||||||
SPTB_chr14_64741283_64884907 | 64859716 | CTCTCTAT others(1): Show |
C | intron_variant | MODIFIER | HG03239.hp1 HG03654.hp1 HG03704.hp1 others(6): Show |
a0001a0002a0003others(2): Show | a0001c0001a0001c0002a0002c0006others(4): Show | a0001c0001t0035a0001c0002t0001a0002c0006t0014others(5): Show | a0001c0001t0035g0025 a0001c0002t0001g0018 a0002c0006t0014g0026 others(6): Show |
9 | 268 | 0.0336 | -8 | c.-52 others(27): Show |
SPTB | ENSG00000070182.21 | transcript | ENST00000644917.1 | protein_coding | 1/35 | chr14 | TogoVar | |||||||
SPTLC2_chr14_77500997_77621637 | 77523400 | GTGGAGAG others(1): Show |
G | intron_variant | MODIFIER | HG00621.hp2 NA18950.hp2 NA18966.hp2 |
a0001 | a0001c0001 | a0001c0001t0001 | a0001c0001t0001g0090 a0001c0001t0001g0135 a0001c0001t0001g0171 |
3 | 246 | 0.0122 | -8 | c.130 others(27): Show |
SPTLC2 | ENSG00000100596.8 | transcript | ENST00000216484.7 | protein_coding | 9/11 | chr14 | TogoVar | |||||||
SPTLC2_chr14_77500997_77621637 | 77534176 | TCTCACAC others(1): Show |
T | intron_variant | MODIFIER | HG00621.hp2 HG01928.hp1 NA18747.hp2 others(2): Show |
a0001 | a0001c0001 | a0001c0001t0001 | a0001c0001t0001g0090 a0001c0001t0001g0092 a0001c0001t0001g0146 others(2): Show |
5 | 246 | 0.0203 | -8 | c.130 others(29): Show |
SPTLC2 | ENSG00000100596.8 | transcript | ENST00000216484.7 | protein_coding | 9/11 | chr14 | TogoVar | |||||||
SPTLC2_chr14_77500997_77621637 | 77534178 | TCACACAC others(1): Show |
T | intron_variant | MODIFIER | HG00099.hp2 HG00438.hp2 HG01106.hp1 others(29): Show |
a0001 | a0001c0001a0001c0003 | a0001c0001t0001a0001c0001t0009a0001c0001t0014others(4): Show | a0001c0001t0001g0040 a0001c0001t0001g0044 a0001c0001t0001g0048 others(29): Show |
32 | 246 | 0.1301 | -8 | c.130 others(29): Show |
SPTLC2 | ENSG00000100596.8 | transcript | ENST00000216484.7 | protein_coding | 9/11 | chr14 | TogoVar | |||||||
SPTLC2_chr14_77500997_77621637 | 77539483 | CTTTTTTT others(1): Show |
C | intron_variant | MODIFIER | HG01884.hp1 HG02145.hp2 HG02559.hp1 others(4): Show |
a0001 | a0001c0001a0001c0003a0001c0005 | a0001c0001t0004a0001c0001t0030a0001c0001t0043others(4): Show | a0001c0001t0004g0029 a0001c0001t0030g0161 a0001c0001t0043g0026 others(4): Show |
7 | 246 | 0.0285 | -8 | c.130 others(29): Show |
SPTLC2 | ENSG00000100596.8 | transcript | ENST00000216484.7 | protein_coding | 9/11 | chr14 | TogoVar | |||||||
SPTLC2_chr14_77500997_77621637 | 77564400 | TACACACA others(1): Show |
T | intron_variant | MODIFIER | HG01515.hp2 HG01517.hp2 HG02145.hp1 others(7): Show |
a0001 | a0001c0001a0001c0006a0001c0012 | a0001c0001t0003a0001c0001t0004a0001c0001t0026others(4): Show | a0001c0001t0003g0185 a0001c0001t0003g0218 a0001c0001t0003g0219 others(7): Show |
10 | 246 | 0.0407 | -8 | c.757 others(25): Show |
SPTLC2 | ENSG00000100596.8 | transcript | ENST00000216484.7 | protein_coding | 5/11 | chr14 | TogoVar | |||||||
SPTLC2_chr14_77500997_77621637 | 77573500 | AAAATAAA others(1): Show |
A | intron_variant | MODIFIER | HG00099.hp1 HG00099.hp2 HG00280.hp1 others(179): Show |
a0001a0002 | a0001c0001a0001c0002a0001c0003others(7): Show | a0001c0001t0001a0001c0001t0002a0001c0001t0003others(45): Show | a0001c0001t0001g0001 a0001c0001t0001g0010 a0001c0001t0001g0019 others(178): Show |
182 | 246 | 0.7398 | -8 | c.632 others(25): Show |
SPTLC2 | ENSG00000100596.8 | transcript | ENST00000216484.7 | protein_coding | 4/11 | chr14 | TogoVar | |||||||
SPTLC2_chr14_77500997_77621637 | 77583199 | CAATAAAT others(1): Show |
C | intron_variant | MODIFIER | HG02145.hp2 HG02723.hp1 |
a0001 | a0001c0001a0001c0005 | a0001c0001t0003a0001c0005t0038 | a0001c0001t0003g0065 a0001c0005t0038g0139 |
2 | 246 | 0.0081 | -8 | c.328 others(25): Show |
SPTLC2 | ENSG00000100596.8 | transcript | ENST00000216484.7 | protein_coding | 2/11 | chr14 | TogoVar | |||||||
SPTLC2_chr14_77500997_77621637 | 77591692 | CTGTATGT others(1): Show |
C | intron_variant | MODIFIER | HG00280.hp1 HG00408.hp2 HG00438.hp1 others(48): Show |
a0001a0002 | a0001c0001a0001c0002a0001c0005others(1): Show | a0001c0001t0001a0001c0001t0002a0001c0001t0003others(13): Show | a0001c0001t0001g0023 a0001c0001t0001g0030 a0001c0001t0001g0040 others(48): Show |
51 | 246 | 0.2073 | -8 | c.327 others(25): Show |
SPTLC2 | ENSG00000100596.8 | transcript | ENST00000216484.7 | protein_coding | 2/11 | chr14 | TogoVar | |||||||
SPTLC3_chr20_13003972_13174103 | 13027641 | GCACACAC others(1): Show |
G | intron_variant | MODIFIER | HG00280.hp2 HG00423.hp1 HG00438.hp1 others(42): Show |
a0001a0002 | a0001c0001a0001c0003a0001c0004others(3): Show | a0001c0001t0001a0001c0001t0002a0001c0001t0003others(18): Show | a0001c0001t0001g0181 a0001c0001t0001g0182 a0001c0001t0001g0187 others(42): Show |
45 | 292 | 0.1541 | -8 | c.117 others(27): Show |
SPTLC3 | ENSG00000172296.13 | transcript | ENST00000399002.7 | protein_coding | 1/11 | INFO_REALIGN_3_PRIME | chr20 | TogoVar | ||||||
SPTLC3_chr20_13003972_13174103 | 13040046 | CGTGTGTG others(1): Show |
C | intron_variant | MODIFIER | HG00423.hp2 HG00621.hp1 HG00642.hp2 others(62): Show |
a0001a0002a0003others(3): Show | a0001c0001a0001c0003a0002c0002others(6): Show | a0001c0001t0002a0001c0001t0003a0001c0001t0008others(23): Show | a0001c0001t0002g0003 a0001c0001t0002g0015 a0001c0001t0002g0021 others(62): Show |
65 | 292 | 0.2226 | -8 | c.118 others(25): Show |
SPTLC3 | ENSG00000172296.13 | transcript | ENST00000399002.7 | protein_coding | 1/11 | INFO_REALIGN_3_PRIME | chr20 | TogoVar | ||||||
SPTLC3_chr20_13003972_13174103 | 13044995 | CCACACAC others(1): Show |
C | intron_variant | MODIFIER | HG00140.hp2 HG00280.hp1 HG00280.hp2 others(109): Show |
a0001a0002a0003others(3): Show | a0001c0001a0001c0003a0001c0004others(7): Show | a0001c0001t0001a0001c0001t0002a0001c0001t0003others(50): Show | a0001c0001t0001g0093 a0001c0001t0001g0095 a0001c0001t0001g0096 others(109): Show |
112 | 292 | 0.3836 | -8 | c.118 others(25): Show |
SPTLC3 | ENSG00000172296.13 | transcript | ENST00000399002.7 | protein_coding | 1/11 | INFO_REALIGN_3_PRIME | chr20 | TogoVar | ||||||
SPTLC3_chr20_13003972_13174103 | 13060377 | GTTATTTA others(1): Show |
G | intron_variant | MODIFIER | HG00140.hp2 HG00280.hp1 HG00280.hp2 others(112): Show |
a0001a0003a0004others(1): Show | a0001c0001a0001c0003a0001c0004others(4): Show | a0001c0001t0001a0001c0001t0002a0001c0001t0003others(46): Show | a0001c0001t0001g0093 a0001c0001t0001g0095 a0001c0001t0001g0096 others(112): Show |
115 | 292 | 0.3938 | -8 | c.303 others(27): Show |
SPTLC3 | ENSG00000172296.13 | transcript | ENST00000399002.7 | protein_coding | 2/11 | INFO_REALIGN_3_PRIME | chr20 | TogoVar | ||||||
SPTLC3_chr20_13003972_13174103 | 13067044 | CATATATA others(1): Show |
C | intron_variant | MODIFIER | HG01255.hp2 HG02622.hp1 HG02895.hp2 |
a0001a0002 | a0001c0005a0001c0012a0002c0002 | a0001c0005t0010a0001c0012t0023a0002c0002t0001 | a0001c0005t0010g0231 a0001c0012t0023g0165 a0002c0002t0001g0199 |
3 | 292 | 0.0103 | -8 | c.304 others(25): Show |
SPTLC3 | ENSG00000172296.13 | transcript | ENST00000399002.7 | protein_coding | 2/11 | INFO_REALIGN_3_PRIME | chr20 | TogoVar | ||||||
SPTSSA_chr14_34427788_34467240 | 34443134 | GGTGTGTG others(1): Show |
G | intron_variant | MODIFIER | HG01884.hp2 HG02055.hp2 HG02145.hp1 others(6): Show |
a0001 | a0001c0001 | a0001c0001t0009a0001c0001t0015a0001c0001t0025others(2): Show | a0001c0001t0009g0325 a0001c0001t0009g0326 a0001c0001t0009g0327 others(6): Show |
9 | 344 | 0.0262 | -8 | c.113 others(25): Show |
SPTSSA | ENSG00000165389.7 | transcript | ENST00000298130.5 | protein_coding | 1/1 | chr14 | TogoVar | |||||||
SPTSSA_chr14_34427788_34467240 | 34462894 | GCACACAC others(1): Show |
G | upstream_gene_variant | MODIFIER | HG00735.hp1 HG00741.hp1 HG01106.hp2 others(20): Show |
a0001 | a0001c0001a0001c0003 | a0001c0001t0001a0001c0001t0022a0001c0003t0001 | a0001c0001t0001g0006 a0001c0001t0001g0139 a0001c0001t0001g0141 others(20): Show |
23 | 344 | 0.0669 | -8 | c.-69 others(17): Show |
SPTSSA | ENSG00000165389.7 | transcript | ENST00000298130.5 | protein_coding | 655 | chr14 | TogoVar | |||||||
SPTSSA_chr14_34427788_34467240 | 34462934 | ACACACAC others(1): Show |
A | upstream_gene_variant | MODIFIER | HG00408.hp2 HG01074.hp2 HG01081.hp2 others(12): Show |
a0001 | a0001c0001 | a0001c0001t0001a0001c0001t0002a0001c0001t0003others(2): Show | a0001c0001t0001g0093 a0001c0001t0001g0117 a0001c0001t0001g0121 others(12): Show |
15 | 344 | 0.0436 | -8 | c.-73 others(17): Show |
SPTSSA | ENSG00000165389.7 | transcript | ENST00000298130.5 | protein_coding | 695 | chr14 | TogoVar | |||||||
SPTSSA_chr14_34427788_34467240 | 34467217 | AACACACA others(1): Show |
A | upstream_gene_variant | MODIFIER | HG01256.hp1 HG01258.hp2 HG01433.hp1 others(11): Show |
a0001 | a0001c0001 | a0001c0001t0001a0001c0001t0003a0001c0001t0005others(2): Show | a0001c0001t0001g0005 a0001c0001t0001g0018 a0001c0001t0001g0084 others(10): Show |
14 | 344 | 0.0407 | -8 | c.-50 others(19): Show |
SPTSSA | ENSG00000165389.7 | transcript | ENST00000298130.5 | protein_coding | 4978 | chr14 | TogoVar | |||||||
SPTSSB_chr3_161339798_161376517 | 161369286 | TTTTCTTT others(1): Show |
T | intron_variant | MODIFIER | HG02572.hp1 HG02602.hp1 HG02723.hp1 others(1): Show |
a0001 | a0001c0001 | a0001c0001t0001a0001c0001t0002a0001c0001t0009 | a0001c0001t0001g0039 a0001c0001t0002g0114 a0001c0001t0009g0058 |
4 | 412 | 0.0097 | -8 | c.-12 others(27): Show |
SPTSSB | ENSG00000196542.9 | transcript | ENST00000620149.2 | protein_coding | 1/2 | chr3 | TogoVar | |||||||
SQLE_chr8_124993505_125027283 | 125001482 | GTGTGTGT others(1): Show |
G | intron_variant | MODIFIER | HG00423.hp2 HG00438.hp2 HG00544.hp1 others(57): Show |
a0001a0009 | a0001c0001a0009c0018 | a0001c0001t0001a0001c0001t0002a0001c0001t0010others(1): Show | a0001c0001t0001g0003 a0001c0001t0001g0004 a0001c0001t0001g0005 others(26): Show |
60 | 378 | 0.1587 | -8 | c.292 others(25): Show |
SQLE | ENSG00000104549.12 | transcript | ENST00000265896.10 | protein_coding | 1/10 | INFO_REALIGN_3_PRIME | chr8 | TogoVar | ||||||
SQOR_chr15_45630029_45696281 | 45632195 | CCCCTCCC others(1): Show |
C | upstream_gene_variant | MODIFIER | HG02109.hp2 HG02257.hp2 HG02280.hp2 others(2): Show |
a0001 | a0001c0001 | a0001c0001t0003a0001c0001t0007 | a0001c0001t0003g0314 a0001c0001t0003g0315 a0001c0001t0003g0317 others(2): Show |
5 | 340 | 0.0147 | -8 | c.-29 others(19): Show |
SQOR | ENSG00000137767.14 | transcript | ENST00000260324.12 | protein_coding | 2833 | chr15 | TogoVar | |||||||
SQSTM1_chr5_179815905_179843078 | 179843041 | AGAAGGAA others(1): Show |
A | downstream_gene_variant | MODIFIER | HG01255.hp1 HG02572.hp2 NA20300.hp2 |
a0001 | a0001c0001 | a0001c0001t0001a0001c0001t0003 | a0001c0001t0001g0190 a0001c0001t0001g0262 a0001c0001t0003g0139 |
3 | 462 | 0.0065 | -8 | c.*64 others(19): Show |
SQSTM1 | ENSG00000161011.20 | transcript | ENST00000389805.9 | protein_coding | 4964 | chr5 | TogoVar | |||||||
SRBD1_chr2_45383680_45616267 | 45421506 | CAAACAAA others(1): Show |
C | intron_variant | MODIFIER | HG01069.hp2 HG01891.hp2 HG02145.hp1 others(12): Show |
a0001a0002a0003 | a0001c0001a0002c0002a0002c0004others(1): Show | a0001c0001t0001a0002c0002t0001a0002c0004t0001others(1): Show | a0001c0001t0001g0054 a0001c0001t0001g0074 a0001c0001t0001g0075 others(12): Show |
15 | 358 | 0.0419 | -8 | c.205 others(27): Show |
SRBD1 | ENSG00000068784.13 | transcript | ENST00000263736.5 | protein_coding | 16/20 | chr2 | TogoVar | |||||||
SRBD1_chr2_45383680_45616267 | 45432003 | GTATTTAT others(1): Show |
G | intron_variant | MODIFIER | HG02027.hp1 HG02965.hp1 NA18949.hp1 |
a0001a0002 | a0001c0001a0002c0002 | a0001c0001t0001a0002c0002t0001 | a0001c0001t0001g0210 a0001c0001t0001g0227 a0002c0002t0001g0136 |
3 | 358 | 0.0084 | -8 | c.205 others(29): Show |
SRBD1 | ENSG00000068784.13 | transcript | ENST00000263736.5 | protein_coding | 16/20 | chr2 | TogoVar | |||||||
SRBD1_chr2_45383680_45616267 | 45465000 | TACACACA others(1): Show |
T | intron_variant | MODIFIER | HG00323.hp2 HG01261.hp2 HG02257.hp2 others(2): Show |
a0001a0002 | a0001c0001a0002c0002a0002c0004 | a0001c0001t0001a0001c0001t0006a0002c0002t0001others(1): Show | a0001c0001t0001g0249 a0001c0001t0006g0357 a0002c0002t0001g0267 others(2): Show |
5 | 358 | 0.0140 | -8 | c.204 others(29): Show |
SRBD1 | ENSG00000068784.13 | transcript | ENST00000263736.5 | protein_coding | 16/20 | chr2 | TogoVar | |||||||
SRBD1_chr2_45383680_45616267 | 45509598 | AACACACA others(1): Show |
A | intron_variant | MODIFIER | HG02486.hp2 HG02572.hp1 HG02922.hp2 others(4): Show |
a0001a0002a0003others(2): Show | a0001c0014a0002c0002a0002c0004others(3): Show | a0001c0014t0001a0002c0002t0001a0002c0004t0001others(3): Show | a0001c0014t0001g0178 a0002c0002t0001g0020 a0002c0002t0001g0118 others(4): Show |
7 | 358 | 0.0196 | -8 | c.187 others(29): Show |
SRBD1 | ENSG00000068784.13 | transcript | ENST00000263736.5 | protein_coding | 14/20 | chr2 | TogoVar | |||||||
SRBD1_chr2_45383680_45616267 | 45521286 | AACACACA others(1): Show |
A | intron_variant | MODIFIER | HG00738.hp1 HG01168.hp1 HG01169.hp1 others(7): Show |
a0001 | a0001c0001 | a0001c0001t0002 | a0001c0001t0002g0129 a0001c0001t0002g0130 a0001c0001t0002g0131 others(7): Show |
10 | 358 | 0.0279 | -8 | c.187 others(29): Show |
SRBD1 | ENSG00000068784.13 | transcript | ENST00000263736.5 | protein_coding | 14/20 | chr2 | TogoVar | |||||||
SRCIN1_chr17_38525031_38610952 | 38590739 | CTTAGCCC others(1): Show |
C | intron_variant | MODIFIER | HG00544.hp1 HG00558.hp2 HG00639.hp1 others(76): Show |
a0001a0002a0003others(3): Show | a0001c0001a0001c0002a0001c0003others(13): Show | a0001c0001t0001a0001c0001t0004a0001c0001t0009others(31): Show | a0001c0001t0001g0155 a0001c0001t0001g0167 a0001c0001t0001g0168 others(70): Show |
79 | 261 | 0.3027 | -8 | c.23- others(25): Show |
SRCIN1 | ENSG00000277363.5 | transcript | ENST00000617146.5 | protein_coding | 1/18 | chr17 | TogoVar | |||||||
SRCIN1_chr17_38525031_38610952 | 38596002 | CGGAGAGC others(1): Show |
C | intron_variant | MODIFIER | HG01192.hp1 HG01884.hp2 HG02055.hp1 others(26): Show |
a0001a0002a0004 | a0001c0001a0001c0003a0001c0005others(5): Show | a0001c0001t0001a0001c0001t0010a0001c0001t0014others(13): Show | a0001c0001t0001g0125 a0001c0001t0010g0124 a0001c0001t0010g0127 others(25): Show |
29 | 261 | 0.1111 | -8 | c.22+ others(23): Show |
SRCIN1 | ENSG00000277363.5 | transcript | ENST00000617146.5 | protein_coding | 1/18 | chr17 | TogoVar | |||||||
SRC_chr20_37341140_37411050 | 37361826 | GGTAGAGA others(1): Show |
G | intron_variant | MODIFIER | HG01099.hp1 HG01346.hp2 HG01361.hp1 others(2): Show |
a0001 | a0001c0001a0001c0004 | a0001c0001t0001a0001c0001t0024a0001c0001t0038others(1): Show | a0001c0001t0001g0255 a0001c0001t0001g0277 a0001c0001t0024g0271 others(2): Show |
5 | 282 | 0.0177 | -8 | c.-24 others(27): Show |
SRC | ENSG00000197122.13 | transcript | ENST00000373578.7 | protein_coding | 1/13 | INFO_REALIGN_3_PRIME | chr20 | TogoVar | ||||||
SRC_chr20_37341140_37411050 | 37365319 | AACACACA others(1): Show |
A | intron_variant | MODIFIER | HG00140.hp1 HG00140.hp2 HG00544.hp2 others(22): Show |
a0001 | a0001c0001 | a0001c0001t0001a0001c0001t0005a0001c0001t0006others(3): Show | a0001c0001t0001g0034 a0001c0001t0001g0036 a0001c0001t0001g0037 others(21): Show |
25 | 282 | 0.0887 | -8 | c.-17 others(23): Show |
SRC | ENSG00000197122.13 | transcript | ENST00000373578.7 | protein_coding | 2/13 | INFO_REALIGN_3_PRIME | chr20 | TogoVar | ||||||
SRC_chr20_37341140_37411050 | 37373243 | TACACACG others(1): Show |
T | intron_variant | MODIFIER | HG00408.hp2 HG00438.hp1 HG00609.hp1 others(87): Show |
a0001a0002 | a0001c0001a0001c0002a0001c0003others(3): Show | a0001c0001t0001a0001c0001t0002a0001c0001t0004others(27): Show | a0001c0001t0001g0016 a0001c0001t0001g0049 a0001c0001t0001g0050 others(86): Show |
90 | 282 | 0.3192 | -8 | c.-17 others(27): Show |
SRC | ENSG00000197122.13 | transcript | ENST00000373578.7 | protein_coding | 2/13 | INFO_REALIGN_3_PRIME | chr20 | TogoVar | ||||||
SRD5A2_chr2_31517480_31585938 | 31554924 | CGTGTGTG others(1): Show |
C | intron_variant | MODIFIER | HG00408.hp1 HG00423.hp1 HG00597.hp2 others(37): Show |
a0001a0002 | a0001c0001a0002c0002 | a0001c0001t0001a0001c0001t0021a0002c0002t0001 | a0001c0001t0001g0004 a0001c0001t0001g0180 a0001c0001t0001g0181 others(35): Show |
40 | 386 | 0.1036 | -8 | c.282 others(27): Show |
SRD5A2 | ENSG00000277893.2 | transcript | ENST00000622030.2 | protein_coding | 1/4 | chr2 | TogoVar | |||||||
SRD5A2_chr2_31517480_31585938 | 31559836 | CCACACAC others(1): Show |
C | intron_variant | MODIFIER | HG01361.hp2 HG01891.hp1 HG02818.hp1 |
a0001a0002 | a0001c0001a0002c0002 | a0001c0001t0001a0001c0001t0032a0002c0002t0001 | a0001c0001t0001g0196 a0001c0001t0032g0284 a0002c0002t0001g0102 |
3 | 386 | 0.0078 | -8 | c.281 others(27): Show |
SRD5A2 | ENSG00000277893.2 | transcript | ENST00000622030.2 | protein_coding | 1/4 | chr2 | TogoVar | |||||||
SRD5A3_chr4_55341242_55378100 | 55343115 | CAAAAAAA others(1): Show |
C | upstream_gene_variant | MODIFIER | HG00323.hp2 HG00438.hp1 HG00597.hp2 others(39): Show |
a0001a0004 | a0001c0001a0004c0005 | a0001c0001t0001a0001c0001t0002a0001c0001t0003others(19): Show | a0001c0001t0001g0002 a0001c0001t0001g0008 a0001c0001t0001g0013 others(36): Show |
42 | 384 | 0.1094 | -8 | c.-32 others(19): Show |
SRD5A3 | ENSG00000128039.13 | transcript | ENST00000264228.9 | protein_coding | 3126 | chr4 | TogoVar |