view | regionname | pos | ref | alt | annotation | impact | samples | ahapids | chapids | thapids | thapids | ac | an | af | len | hgvs_c | hgvs_p | genename | geneid | featuretype | featureid | transcript_biotype | rank | cdna cdna pos length
|
cds cds pos length
|
aa aa pos length
|
distance | status | chr | external |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
SRSF11_chr1_70216380_70258052 | 70254510 | CGTGTGTG others(1): Show |
C | downstream_gene_variant | MODIFIER | HG01192.hp2 HG03139.hp2 HG03225.hp2 others(8): Show |
a0001 | a0001c0001 | a0001c0001t0001a0001c0001t0004a0001c0001t0005 | a0001c0001t0001g0026 a0001c0001t0001g0032 a0001c0001t0001g0050 others(7): Show |
11 | 338 | 0.0325 | -8 | c.*37 others(19): Show |
SRSF11 | ENSG00000116754.14 | transcript | ENST00000370949.2 | protein_coding | 1459 | chr1 | TogoVar | |||||||
SRSF3_chr6_36589362_36610600 | 36610330 | TAAAAAAA others(1): Show |
T | downstream_gene_variant | MODIFIER | HG01891.hp1 HG02559.hp2 HG02976.hp1 others(5): Show |
a0001 | a0001c0001 | a0001c0001t0001a0001c0001t0009 | a0001c0001t0001g0012 a0001c0001t0001g0064 a0001c0001t0001g0065 others(2): Show |
8 | 382 | 0.0209 | -8 | c.*83 others(19): Show |
SRSF3 | ENSG00000112081.17 | transcript | ENST00000373715.11 | protein_coding | 4731 | chr6 | TogoVar | |||||||
SRSF6_chr20_43452896_43469243 | 43461334 | GTTGTTTT others(1): Show |
G | 3_prime_UTR_variant | MODIFIER | HG00639.hp1 HG02148.hp1 HG02922.hp1 others(3): Show |
a0001a0002 | a0001c0001a0001c0005a0002c0004 | a0001c0001t0086a0001c0005t0017a0002c0004t0017 | a0001c0001t0086g0002 a0001c0005t0017g0012 a0001c0005t0017g0033 others(1): Show |
6 | 464 | 0.0129 | -8 | c.*27 others(17): Show |
SRSF6 | ENSG00000124193.16 | transcript | ENST00000244020.5 | protein_coding | 6/6 | 274 | INFO_REALIGN_3_PRIME | chr20 | TogoVar | |||||
SRSF6_chr20_43452896_43469243 | 43461337 | GTTTTTTT others(1): Show |
G | 3_prime_UTR_variant | MODIFIER | HG00140.hp1 HG00323.hp2 HG00423.hp1 others(61): Show |
a0001a0002a0003 | a0001c0001a0001c0003a0002c0004others(1): Show | a0001c0001t0002a0001c0001t0028a0001c0001t0059others(5): Show | a0001c0001t0002g0001 a0001c0001t0002g0002 a0001c0001t0002g0004 others(11): Show |
64 | 464 | 0.1379 | -8 | c.*30 others(17): Show |
SRSF6 | ENSG00000124193.16 | transcript | ENST00000244020.5 | protein_coding | 6/6 | 304 | INFO_REALIGN_3_PRIME | chr20 | TogoVar | |||||
SRSF6_chr20_43452896_43469243 | 43466904 | GGTGTGTG others(1): Show |
G | downstream_gene_variant | MODIFIER | HG01167.hp1 HG02055.hp2 HG02615.hp2 others(5): Show |
a0001 | a0001c0001 | a0001c0001t0004a0001c0001t0009a0001c0001t0026others(2): Show | a0001c0001t0004g0009 a0001c0001t0009g0009 a0001c0001t0026g0001 others(2): Show |
8 | 464 | 0.0172 | -8 | c.*58 others(19): Show |
SRSF6 | ENSG00000124193.16 | transcript | ENST00000244020.5 | protein_coding | 2662 | chr20 | TogoVar | |||||||
SS18_chr18_26011253_26095613 | 26047259 | CAAAAAAA others(1): Show |
C | intron_variant | MODIFIER | HG00673.hp2 HG01109.hp2 HG01361.hp1 others(28): Show |
a0001a0005 | a0001c0001a0001c0005a0005c0006 | a0001c0001t0001a0001c0001t0007a0001c0001t0011others(2): Show | a0001c0001t0001g0009 a0001c0001t0001g0018 a0001c0001t0001g0019 others(28): Show |
31 | 318 | 0.0975 | -8 | c.607 others(25): Show |
SS18 | ENSG00000141380.14 | transcript | ENST00000415083.7 | protein_coding | 5/10 | chr18 | TogoVar | |||||||
SSBP2_chr5_81407804_81756097 | 81445136 | TTTTATAT others(1): Show |
T | intron_variant | MODIFIER | HG00733.hp1 HG01243.hp1 HG01981.hp2 others(4): Show |
a0001 | a0001c0001 | a0001c0001t0008a0001c0001t0021a0001c0001t0030others(2): Show | a0001c0001t0008g0130 a0001c0001t0008g0146 a0001c0001t0021g0181 others(4): Show |
7 | 206 | 0.0340 | -8 | c.802 others(25): Show |
SSBP2 | ENSG00000145687.17 | transcript | ENST00000615665.5 | protein_coding | 12/16 | chr5 | TogoVar | |||||||
SSBP2_chr5_81407804_81756097 | 81493251 | CAGATAGA others(1): Show |
C | intron_variant | MODIFIER | HG01928.hp2 HG02895.hp2 HG02897.hp2 others(3): Show |
a0001 | a0001c0001a0001c0002 | a0001c0001t0009a0001c0001t0014a0001c0002t0001others(1): Show | a0001c0001t0009g0025 a0001c0001t0014g0195 a0001c0001t0014g0196 others(3): Show |
6 | 206 | 0.0291 | -8 | c.373 others(25): Show |
SSBP2 | ENSG00000145687.17 | transcript | ENST00000615665.5 | protein_coding | 5/16 | chr5 | TogoVar | |||||||
SSBP2_chr5_81407804_81756097 | 81501212 | AATATATA others(1): Show |
A | intron_variant | MODIFIER | HG01255.hp1 HG01258.hp2 NA18957.hp2 |
a0001 | a0001c0002 | a0001c0002t0001a0001c0002t0006a0001c0002t0010 | a0001c0002t0001g0077 a0001c0002t0006g0091 a0001c0002t0010g0114 |
3 | 206 | 0.0146 | -8 | c.373 others(27): Show |
SSBP2 | ENSG00000145687.17 | transcript | ENST00000615665.5 | protein_coding | 5/16 | chr5 | TogoVar | |||||||
SSBP2_chr5_81407804_81756097 | 81501262 | TATATATA others(1): Show |
T | intron_variant | MODIFIER | HG03654.hp2 HG04115.hp2 NA20752.hp2 |
a0001 | a0001c0002 | a0001c0002t0015a0001c0002t0064 | a0001c0002t0015g0093 a0001c0002t0015g0094 a0001c0002t0064g0123 |
3 | 206 | 0.0146 | -8 | c.373 others(27): Show |
SSBP2 | ENSG00000145687.17 | transcript | ENST00000615665.5 | protein_coding | 5/16 | chr5 | TogoVar | |||||||
SSBP2_chr5_81407804_81756097 | 81501264 | TATATACA others(1): Show |
T | intron_variant | MODIFIER | HG00741.hp1 HG02572.hp2 HG02895.hp1 others(7): Show |
a0001 | a0001c0001 | a0001c0001t0001a0001c0001t0002a0001c0001t0004others(2): Show | a0001c0001t0001g0053 a0001c0001t0002g0028 a0001c0001t0002g0149 others(7): Show |
10 | 206 | 0.0485 | -8 | c.373 others(27): Show |
SSBP2 | ENSG00000145687.17 | transcript | ENST00000615665.5 | protein_coding | 5/16 | chr5 | TogoVar | |||||||
SSBP2_chr5_81407804_81756097 | 81542630 | CATGGTGA others(1): Show |
C | intron_variant | MODIFIER | HG00099.hp2 HG00423.hp2 HG01069.hp2 others(29): Show |
a0001 | a0001c0001a0001c0002 | a0001c0001t0002a0001c0001t0003a0001c0001t0007others(15): Show | a0001c0001t0002g0104 a0001c0001t0002g0124 a0001c0001t0002g0149 others(29): Show |
32 | 206 | 0.1553 | -8 | c.283 others(27): Show |
SSBP2 | ENSG00000145687.17 | transcript | ENST00000615665.5 | protein_coding | 4/16 | chr5 | TogoVar | |||||||
SSBP2_chr5_81407804_81756097 | 81542817 | TTCTCTCT others(1): Show |
T | intron_variant | MODIFIER | HG02055.hp1 HG02055.hp2 HG02451.hp1 others(2): Show |
a0001 | a0001c0001a0001c0002a0001c0003 | a0001c0001t0017a0001c0001t0040a0001c0002t0013others(1): Show | a0001c0001t0017g0086 a0001c0001t0040g0085 a0001c0002t0013g0008 others(2): Show |
5 | 206 | 0.0243 | -8 | c.283 others(27): Show |
SSBP2 | ENSG00000145687.17 | transcript | ENST00000615665.5 | protein_coding | 4/16 | chr5 | TogoVar | |||||||
SSBP2_chr5_81407804_81756097 | 81667286 | TACACACA others(1): Show |
T | intron_variant | MODIFIER | HG01109.hp1 HG01884.hp2 HG02615.hp1 others(10): Show |
a0001 | a0001c0001 | a0001c0001t0005a0001c0001t0007a0001c0001t0023others(5): Show | a0001c0001t0005g0145 a0001c0001t0005g0159 a0001c0001t0005g0160 others(10): Show |
13 | 206 | 0.0631 | -8 | c.63- others(25): Show |
SSBP2 | ENSG00000145687.17 | transcript | ENST00000615665.5 | protein_coding | 1/16 | chr5 | TogoVar | |||||||
SSBP2_chr5_81407804_81756097 | 81736141 | GAAACACA others(1): Show |
G | intron_variant | MODIFIER | HG00738.hp1 HG01978.hp1 NA18972.hp1 others(1): Show |
a0001 | a0001c0001a0001c0002 | a0001c0001t0001a0001c0001t0002a0001c0001t0021others(1): Show | a0001c0001t0001g0116 a0001c0001t0002g0104 a0001c0001t0021g0092 others(1): Show |
4 | 206 | 0.0194 | -8 | c.62+ others(25): Show |
SSBP2 | ENSG00000145687.17 | transcript | ENST00000615665.5 | protein_coding | 1/16 | chr5 | TogoVar | |||||||
SSBP2_chr5_81407804_81756097 | 81736182 | ACACACAC others(1): Show |
A | intron_variant | MODIFIER | HG00741.hp1 HG01109.hp1 HG01884.hp2 others(9): Show |
a0001 | a0001c0001a0001c0002 | a0001c0001t0001a0001c0001t0004a0001c0001t0005others(6): Show | a0001c0001t0001g0053 a0001c0001t0004g0081 a0001c0001t0004g0082 others(9): Show |
12 | 206 | 0.0583 | -8 | c.62+ others(25): Show |
SSBP2 | ENSG00000145687.17 | transcript | ENST00000615665.5 | protein_coding | 1/16 | chr5 | TogoVar | |||||||
SSBP3_chr1_54220432_54411394 | 54239520 | CTGTGCTC others(1): Show |
C | intron_variant | MODIFIER | HG02615.hp1 HG02965.hp1 HG03471.hp2 |
a0001 | a0001c0004 | a0001c0004t0002a0001c0004t0004a0001c0004t0020 | a0001c0004t0002g0071 a0001c0004t0004g0142 a0001c0004t0020g0086 |
3 | 280 | 0.0107 | -8 | c.857 others(23): Show |
SSBP3 | ENSG00000157216.17 | transcript | ENST00000610401.6 | protein_coding | 13/17 | chr1 | TogoVar | |||||||
SSBP3_chr1_54220432_54411394 | 54240045 | GGGGTGTG others(1): Show |
G | intron_variant | MODIFIER | HG01081.hp2 HG01515.hp1 HG01884.hp2 others(7): Show |
a0001 | a0001c0001 | a0001c0001t0001a0001c0001t0002a0001c0001t0003others(4): Show | a0001c0001t0001g0118 a0001c0001t0002g0069 a0001c0001t0002g0087 others(7): Show |
10 | 280 | 0.0357 | -8 | c.856 others(23): Show |
SSBP3 | ENSG00000157216.17 | transcript | ENST00000610401.6 | protein_coding | 13/17 | chr1 | TogoVar | |||||||
SSBP3_chr1_54220432_54411394 | 54240083 | TGTGTGCG others(1): Show |
T | intron_variant | MODIFIER | HG00597.hp1 HG01070.hp1 HG01071.hp1 others(10): Show |
a0001 | a0001c0001 | a0001c0001t0002a0001c0001t0003a0001c0001t0006others(5): Show | a0001c0001t0002g0021 a0001c0001t0002g0022 a0001c0001t0002g0046 others(10): Show |
13 | 280 | 0.0464 | -8 | c.856 others(23): Show |
SSBP3 | ENSG00000157216.17 | transcript | ENST00000610401.6 | protein_coding | 13/17 | chr1 | TogoVar | |||||||
SSBP3_chr1_54220432_54411394 | 54240093 | CGCGCGCG others(1): Show |
C | intron_variant | MODIFIER | HG01081.hp2 HG01515.hp1 HG02451.hp1 others(9): Show |
a0001 | a0001c0001 | a0001c0001t0002a0001c0001t0003a0001c0001t0005others(2): Show | a0001c0001t0002g0030 a0001c0001t0002g0039 a0001c0001t0002g0069 others(9): Show |
12 | 280 | 0.0429 | -8 | c.856 others(23): Show |
SSBP3 | ENSG00000157216.17 | transcript | ENST00000610401.6 | protein_coding | 13/17 | chr1 | TogoVar | |||||||
SSBP3_chr1_54220432_54411394 | 54294159 | AAAAGAAA others(1): Show |
A | intron_variant | MODIFIER | HG01891.hp2 HG02258.hp2 HG02647.hp2 others(10): Show |
a0001 | a0001c0001a0001c0002a0001c0005others(1): Show | a0001c0001t0001a0001c0001t0002a0001c0001t0004others(7): Show | a0001c0001t0001g0064 a0001c0001t0002g0121 a0001c0001t0004g0124 others(10): Show |
13 | 280 | 0.0464 | -8 | c.277 others(27): Show |
SSBP3 | ENSG00000157216.17 | transcript | ENST00000610401.6 | protein_coding | 4/17 | chr1 | TogoVar | |||||||
SSBP3_chr1_54220432_54411394 | 54316657 | AAATAAAA others(1): Show |
A | intron_variant | MODIFIER | HG01074.hp2 HG01257.hp2 HG01261.hp2 others(12): Show |
a0001 | a0001c0001 | a0001c0001t0002a0001c0001t0003a0001c0001t0004others(7): Show | a0001c0001t0002g0112 a0001c0001t0003g0170 a0001c0001t0003g0191 others(12): Show |
15 | 280 | 0.0536 | -8 | c.277 others(27): Show |
SSBP3 | ENSG00000157216.17 | transcript | ENST00000610401.6 | protein_coding | 4/17 | chr1 | TogoVar | |||||||
SSBP3_chr1_54220432_54411394 | 54316661 | AAAATAAA others(1): Show |
A | intron_variant | MODIFIER | HG01106.hp2 HG01256.hp1 HG02083.hp1 others(6): Show |
a0001 | a0001c0001 | a0001c0001t0001a0001c0001t0006a0001c0001t0007others(5): Show | a0001c0001t0001g0146 a0001c0001t0006g0203 a0001c0001t0007g0188 others(6): Show |
9 | 280 | 0.0321 | -8 | c.277 others(27): Show |
SSBP3 | ENSG00000157216.17 | transcript | ENST00000610401.6 | protein_coding | 4/17 | chr1 | TogoVar | |||||||
SSBP3_chr1_54220432_54411394 | 54327217 | AAAGGAAG others(1): Show |
A | intron_variant | MODIFIER | HG00558.hp1 HG00621.hp2 HG00642.hp1 others(20): Show |
a0001a0002 | a0001c0001a0001c0002a0002c0008 | a0001c0001t0002a0001c0001t0004a0001c0001t0005others(10): Show | a0001c0001t0002g0069 a0001c0001t0002g0082 a0001c0001t0002g0089 others(20): Show |
23 | 280 | 0.0821 | -8 | c.277 others(27): Show |
SSBP3 | ENSG00000157216.17 | transcript | ENST00000610401.6 | protein_coding | 4/17 | chr1 | TogoVar | |||||||
SSBP3_chr1_54220432_54411394 | 54375336 | CTGCATGC others(1): Show |
C | intron_variant | MODIFIER | HG02083.hp2 HG03654.hp2 HG03710.hp2 others(1): Show |
a0001 | a0001c0001 | a0001c0001t0003a0001c0001t0009a0001c0001t0012others(1): Show | a0001c0001t0003g0230 a0001c0001t0009g0175 a0001c0001t0012g0004 others(1): Show |
4 | 280 | 0.0143 | -8 | c.276 others(27): Show |
SSBP3 | ENSG00000157216.17 | transcript | ENST00000610401.6 | protein_coding | 4/17 | chr1 | TogoVar | |||||||
SSBP3_chr1_54220432_54411394 | 54407749 | ATTTTTTT others(1): Show |
A | upstream_gene_variant | MODIFIER | HG00280.hp1 HG00323.hp1 HG01168.hp2 others(13): Show |
a0001 | a0001c0001 | a0001c0001t0002a0001c0001t0004a0001c0001t0005others(9): Show | a0001c0001t0002g0156 a0001c0001t0004g0154 a0001c0001t0005g0155 others(13): Show |
16 | 280 | 0.0571 | -8 | c.-17 others(19): Show |
SSBP3 | ENSG00000157216.17 | transcript | ENST00000610401.6 | protein_coding | 1356 | chr1 | TogoVar | |||||||
SSC4D_chr7_76384337_76414697 | 76405271 | TTATATAT others(1): Show |
T | intron_variant | MODIFIER | NA18945.hp2 NA18974.hp1 NA19064.hp2 |
a0001a0015 | a0001c0001a0015c0013 | a0001c0001t0001a0001c0001t0008a0015c0013t0003 | a0001c0001t0001g0209 a0001c0001t0008g0210 a0015c0013t0003g0064 |
3 | 388 | 0.0077 | -8 | c.-66 others(23): Show |
SSC4D | ENSG00000146700.9 | transcript | ENST00000275560.4 | protein_coding | 1/10 | chr7 | TogoVar | |||||||
SSC4D_chr7_76384337_76414697 | 76409323 | TCACACAC others(1): Show |
T | intron_variant | MODIFIER | HG00099.hp1 HG00140.hp2 HG00323.hp1 others(130): Show |
a0001a0002a0003others(8): Show | a0001c0001a0001c0004a0001c0005others(12): Show | a0001c0001t0001a0001c0004t0001a0001c0004t0002others(16): Show | a0001c0001t0001g0155 a0001c0001t0001g0156 a0001c0004t0001g0306 others(106): Show |
133 | 388 | 0.3428 | -8 | c.-67 others(21): Show |
SSC4D | ENSG00000146700.9 | transcript | ENST00000275560.4 | protein_coding | 1/10 | chr7 | TogoVar | |||||||
SSC5D_chr19_55483436_55524099 | 55506373 | ATTTTTTT others(1): Show |
A | intron_variant | MODIFIER | HG00140.hp1 HG00408.hp2 HG00438.hp2 others(98): Show |
a0001a0002a0003others(16): Show | a0001c0001a0001c0006a0001c0010others(32): Show | a0001c0001t0001a0001c0001t0002a0001c0006t0001others(34): Show | a0001c0001t0001g0009 a0001c0001t0001g0038 a0001c0001t0001g0053 others(98): Show |
101 | 412 | 0.2452 | -8 | c.278 others(27): Show |
SSC5D | ENSG00000179954.16 | transcript | ENST00000389623.11 | protein_coding | 12/13 | INFO_REALIGN_3_PRIME | chr19 | TogoVar | ||||||
SSC5D_chr19_55483436_55524099 | 55514448 | TAATAATA others(1): Show |
T | intron_variant | MODIFIER | HG00673.hp2 HG01496.hp2 HG01891.hp2 others(9): Show |
a0001a0003a0007others(2): Show | a0001c0001a0001c0006a0001c0010others(4): Show | a0001c0001t0001a0001c0006t0001a0001c0010t0001others(4): Show | a0001c0001t0001g0118 a0001c0006t0001g0269 a0001c0010t0001g0406 others(9): Show |
12 | 412 | 0.0291 | -8 | c.294 others(27): Show |
SSC5D | ENSG00000179954.16 | transcript | ENST00000389623.11 | protein_coding | 13/13 | chr19 | TogoVar | |||||||
SSH1_chr12_108773191_108862583 | 108859300 | TCTTCCTT others(1): Show |
T | upstream_gene_variant | MODIFIER | HG00140.hp2 HG00642.hp1 HG01070.hp2 others(26): Show |
a0001a0004 | a0001c0001a0001c0002a0001c0003others(3): Show | a0001c0001t0001a0001c0001t0004a0001c0001t0011others(14): Show | a0001c0001t0001g0014 a0001c0001t0001g0295 a0001c0001t0004g0011 others(24): Show |
29 | 332 | 0.0874 | -8 | c.-18 others(19): Show |
SSH1 | ENSG00000084112.15 | transcript | ENST00000326495.10 | protein_coding | 1718 | chr12 | TogoVar | |||||||
SSH2_chr17_29620938_29935228 | 29638509 | TACACACA others(1): Show |
T | intron_variant | MODIFIER | HG01109.hp2 HG01243.hp1 HG01346.hp1 others(14): Show |
a0001a0002 | a0001c0001a0001c0019a0002c0002 | a0001c0001t0001a0001c0001t0002a0001c0001t0003others(4): Show | a0001c0001t0001g0001 a0001c0001t0001g0021 a0001c0001t0001g0023 others(14): Show |
17 | 232 | 0.0733 | -8 | c.142 others(27): Show |
SSH2 | ENSG00000141298.19 | transcript | ENST00000540801.6 | protein_coding | 14/15 | chr17 | TogoVar | |||||||
SSH2_chr17_29620938_29935228 | 29696174 | TACACACA others(1): Show |
T | intron_variant | MODIFIER | HG02055.hp2 NA21309.hp1 |
a0001 | a0001c0001 | a0001c0001t0003a0001c0001t0031 | a0001c0001t0003g0087 a0001c0001t0031g0088 |
2 | 232 | 0.0086 | -8 | c.293 others(23): Show |
SSH2 | ENSG00000141298.19 | transcript | ENST00000540801.6 | protein_coding | 4/15 | chr17 | TogoVar | |||||||
SSH2_chr17_29620938_29935228 | 29731414 | ATTTTTTA others(1): Show |
A | intron_variant | MODIFIER | HG02148.hp2 HG02257.hp2 HG03239.hp1 |
a0001 | a0001c0001 | a0001c0001t0001 | a0001c0001t0001g0035 a0001c0001t0001g0067 a0001c0001t0001g0080 |
3 | 232 | 0.0129 | -8 | c.189 others(27): Show |
SSH2 | ENSG00000141298.19 | transcript | ENST00000540801.6 | protein_coding | 3/15 | chr17 | TogoVar | |||||||
SSH2_chr17_29620938_29935228 | 29731417 | TTTTATTT others(1): Show |
T | intron_variant | MODIFIER | HG00099.hp1 HG00280.hp1 HG00323.hp1 others(115): Show |
a0001a0002a0003others(9): Show | a0001c0001a0001c0003a0001c0006others(11): Show | a0001c0001t0001a0001c0001t0002a0001c0001t0003others(30): Show | a0001c0001t0001g0002 a0001c0001t0001g0011 a0001c0001t0001g0020 others(115): Show |
118 | 232 | 0.5086 | -8 | c.189 others(27): Show |
SSH2 | ENSG00000141298.19 | transcript | ENST00000540801.6 | protein_coding | 3/15 | chr17 | TogoVar | |||||||
SSH2_chr17_29620938_29935228 | 29737920 | CTTATTTA others(1): Show |
C | intron_variant | MODIFIER | HG00323.hp2 HG01243.hp1 HG02559.hp1 |
a0001a0002 | a0001c0001a0002c0002 | a0001c0001t0001a0002c0002t0002 | a0001c0001t0001g0008 a0002c0002t0002g0220 a0002c0002t0002g0221 |
3 | 232 | 0.0129 | -8 | c.189 others(27): Show |
SSH2 | ENSG00000141298.19 | transcript | ENST00000540801.6 | protein_coding | 3/15 | chr17 | TogoVar | |||||||
SSH2_chr17_29620938_29935228 | 29744860 | AGTGTGTG others(1): Show |
A | intron_variant | MODIFIER | HG03453.hp2 HG03486.hp2 |
a0001 | a0001c0001 | a0001c0001t0003a0001c0001t0018 | a0001c0001t0003g0101 a0001c0001t0018g0009 |
2 | 232 | 0.0086 | -8 | c.189 others(27): Show |
SSH2 | ENSG00000141298.19 | transcript | ENST00000540801.6 | protein_coding | 3/15 | chr17 | TogoVar | |||||||
SSH2_chr17_29620938_29935228 | 29773019 | GTCCATCC others(1): Show |
G | intron_variant | MODIFIER | HG02622.hp1 HG03041.hp1 NA19043.hp2 |
a0001 | a0001c0001 | a0001c0001t0002a0001c0001t0029 | a0001c0001t0002g0165 a0001c0001t0002g0180 a0001c0001t0029g0164 |
3 | 232 | 0.0129 | -8 | c.188 others(27): Show |
SSH2 | ENSG00000141298.19 | transcript | ENST00000540801.6 | protein_coding | 3/15 | chr17 | TogoVar | |||||||
SSH2_chr17_29620938_29935228 | 29908763 | GAAAAAAA others(1): Show |
G | intron_variant | MODIFIER | HG02895.hp2 HG02896.hp2 HG02922.hp1 others(4): Show |
a0001a0006 | a0001c0001a0006c0008 | a0001c0001t0003a0001c0001t0008a0006c0008t0003 | a0001c0001t0003g0106 a0001c0001t0003g0107 a0001c0001t0003g0108 others(4): Show |
7 | 232 | 0.0302 | -8 | c.63+ others(25): Show |
SSH2 | ENSG00000141298.19 | transcript | ENST00000540801.6 | protein_coding | 1/15 | chr17 | TogoVar | |||||||
SSPN_chr12_26190573_26239777 | 26191677 | TACACACA others(1): Show |
T | upstream_gene_variant | MODIFIER | HG00099.hp1 HG00639.hp2 HG00735.hp2 others(28): Show |
a0001a0002 | a0001c0001a0001c0002a0002c0003 | a0001c0001t0001a0001c0001t0002a0001c0001t0003others(15): Show | a0001c0001t0001g0001 a0001c0001t0001g0222 a0001c0001t0002g0004 others(24): Show |
31 | 384 | 0.0807 | -8 | c.-39 others(19): Show |
SSPN | ENSG00000123096.12 | transcript | ENST00000242729.7 | protein_coding | 3895 | chr12 | TogoVar | |||||||
SSPN_chr12_26190573_26239777 | 26201040 | TATATATT others(1): Show |
T | intron_variant | MODIFIER | HG00099.hp1 HG00280.hp1 HG01123.hp1 others(8): Show |
a0001 | a0001c0001a0001c0002 | a0001c0001t0054a0001c0002t0005a0001c0002t0017 | a0001c0001t0054g0092 a0001c0002t0005g0026 a0001c0002t0005g0200 others(7): Show |
11 | 384 | 0.0287 | -8 | c.279 others(25): Show |
SSPN | ENSG00000123096.12 | transcript | ENST00000242729.7 | protein_coding | 1/2 | chr12 | TogoVar | |||||||
SSPN_chr12_26190573_26239777 | 26209795 | CGTGTGTG others(1): Show |
C | intron_variant | MODIFIER | HG00280.hp2 HG00408.hp2 HG00423.hp1 others(191): Show |
a0001a0002a0007 | a0001c0001a0001c0002a0002c0003others(1): Show | a0001c0001t0001a0001c0001t0002a0001c0001t0003others(33): Show | a0001c0001t0001g0001 a0001c0001t0001g0002 a0001c0001t0001g0005 others(145): Show |
194 | 384 | 0.5052 | -8 | c.279 others(27): Show |
SSPN | ENSG00000123096.12 | transcript | ENST00000242729.7 | protein_coding | 1/2 | INFO_REALIGN_3_PRIME | chr12 | TogoVar | ||||||
SSR1_chr6_7276143_7318199 | 7278354 | TGTGTGTG others(1): Show |
T | downstream_gene_variant | MODIFIER | HG01891.hp1 HG02109.hp2 HG03486.hp2 |
a0001a0002 | a0001c0001a0002c0002 | a0001c0001t0019a0002c0002t0004 | a0001c0001t0019g0150 a0001c0001t0019g0251 a0002c0002t0004g0307 |
3 | 434 | 0.0069 | -8 | c.*11 others(21): Show |
SSR1 | ENSG00000124783.14 | transcript | ENST00000244763.9 | protein_coding | 2788 | chr6 | TogoVar | |||||||
SSR1_chr6_7276143_7318199 | 7278356 | TGTGTGAG others(1): Show |
T | downstream_gene_variant | MODIFIER | HG00408.hp1 HG00423.hp2 HG00438.hp2 others(53): Show |
a0001a0002 | a0001c0001a0002c0002 | a0001c0001t0003a0001c0001t0011a0001c0001t0014others(9): Show | a0001c0001t0003g0001 a0001c0001t0003g0072 a0001c0001t0003g0077 others(46): Show |
56 | 434 | 0.1290 | -8 | c.*11 others(21): Show |
SSR1 | ENSG00000124783.14 | transcript | ENST00000244763.9 | protein_coding | 2786 | chr6 | TogoVar | |||||||
SSR1_chr6_7276143_7318199 | 7278360 | TGAGAGAG others(1): Show |
T | downstream_gene_variant | MODIFIER | HG02559.hp2 HG02622.hp2 NA21309.hp1 |
a0001 | a0001c0001 | a0001c0001t0028 | a0001c0001t0028g0041 a0001c0001t0028g0221 |
3 | 434 | 0.0069 | -8 | c.*11 others(21): Show |
SSR1 | ENSG00000124783.14 | transcript | ENST00000244763.9 | protein_coding | 2782 | chr6 | TogoVar | |||||||
SSR1_chr6_7276143_7318199 | 7294690 | CAAATAAA others(1): Show |
C | intron_variant | MODIFIER | HG00099.hp2 HG00140.hp1 HG00408.hp1 others(149): Show |
a0001a0002 | a0001c0001a0002c0002a0002c0004others(1): Show | a0001c0001t0003a0001c0001t0009a0001c0001t0011others(35): Show | a0001c0001t0003g0001 a0001c0001t0003g0019 a0001c0001t0003g0020 others(125): Show |
152 | 434 | 0.3502 | -8 | c.793 others(23): Show |
SSR1 | ENSG00000124783.14 | transcript | ENST00000244763.9 | protein_coding | 7/7 | chr6 | TogoVar | |||||||
SSR2_chr1_156004048_156025951 | 156015529 | AAAAAAAA others(1): Show |
A | intron_variant | MODIFIER | HG02293.hp1 HG02738.hp1 NA18970.hp2 others(3): Show |
a0001 | a0001c0001 | a0001c0001t0001 | a0001c0001t0001g0019 a0001c0001t0001g0038 a0001c0001t0001g0074 |
6 | 356 | 0.0169 | -8 | c.255 others(23): Show |
SSR2 | ENSG00000163479.14 | transcript | ENST00000295702.9 | protein_coding | 3/5 | chr1 | TogoVar | |||||||
SSR2_chr1_156004048_156025951 | 156015531 | AAAAAATA others(1): Show |
A | intron_variant | MODIFIER | HG01496.hp1 HG02074.hp2 HG02258.hp2 others(10): Show |
a0001 | a0001c0001 | a0001c0001t0001 | a0001c0001t0001g0006 a0001c0001t0001g0020 a0001c0001t0001g0041 others(3): Show |
13 | 356 | 0.0365 | -8 | c.255 others(23): Show |
SSR2 | ENSG00000163479.14 | transcript | ENST00000295702.9 | protein_coding | 3/5 | chr1 | TogoVar | |||||||
SSR3_chr3_156534553_156560117 | 156539021 | CAGTTAGT others(1): Show |
C | downstream_gene_variant | MODIFIER | HG01243.hp1 HG01346.hp1 HG01496.hp1 others(14): Show |
a0001 | a0001c0001a0001c0002 | a0001c0001t0001a0001c0001t0004a0001c0001t0013others(2): Show | a0001c0001t0001g0001 a0001c0001t0001g0113 a0001c0001t0004g0007 others(3): Show |
17 | 400 | 0.0425 | -8 | c.*41 others(19): Show |
SSR3 | ENSG00000114850.7 | transcript | ENST00000265044.7 | protein_coding | 531 | chr3 | TogoVar | |||||||
SSTR1_chr14_38202904_38218067 | 38216703 | TCACACAC others(1): Show |
T | downstream_gene_variant | MODIFIER | HG00621.hp1 NA18955.hp1 NA19000.hp2 |
a0001 | a0001c0001a0001c0003 | a0001c0001t0018a0001c0003t0004 | a0001c0001t0018g0001 a0001c0003t0004g0004 |
3 | 456 | 0.0066 | -8 | c.*61 others(19): Show |
SSTR1 | ENSG00000139874.6 | transcript | ENST00000267377.3 | protein_coding | 3637 | chr14 | TogoVar |