view | regionname | pos | ref | alt | annotation | impact | samples | ahapids | chapids | thapids | thapids | ac | an | af | len | hgvs_c | hgvs_p | genename | geneid | featuretype | featureid | transcript_biotype | rank | cdna cdna pos length
|
cds cds pos length
|
aa aa pos length
|
distance | status | chr | external |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
SRRM3_chr7_76196896_76292287 | 76263877 | CAAAAAAA others(2): Show |
C | intron_variant | MODIFIER | HG00438.hp1 HG00597.hp1 HG00639.hp2 others(32): Show |
a0001a0007 | a0001c0001a0007c0013 | a0001c0001t0001a0001c0001t0002a0001c0001t0003others(1): Show | a0001c0001t0001g0001 a0001c0001t0001g0002 a0001c0001t0001g0003 others(32): Show |
35 | 114 | 0.3070 | -9 | c.675 others(24): Show |
SRRM3 | ENSG00000177679.16 | transcript | ENST00000611745.2 | protein_coding | 8/14 | INFO_REALIGN_3_PRIME | chr7 | TogoVar | ||||||
SRSF6_chr20_43452896_43469243 | 43461337 | GTTTTTTT others(2): Show |
G | 3_prime_UTR_variant | MODIFIER | HG00099.hp2 HG00140.hp2 HG00280.hp1 others(92): Show |
a0001a0002 | a0001c0001a0001c0003a0002c0004 | a0001c0001t0001a0001c0001t0023a0001c0001t0052others(3): Show | a0001c0001t0001g0001 a0001c0001t0001g0003 a0001c0001t0001g0006 others(11): Show |
95 | 239 | 0.3975 | -9 | c.*30 others(18): Show |
SRSF6 | ENSG00000124193.16 | transcript | ENST00000244020.5 | protein_coding | 6/6 | 303 | INFO_REALIGN_3_PRIME | chr20 | TogoVar | |||||
SS18L1_chr20_62138769_62187514 | 62164297 | GGGGCAAG others(2): Show |
G | intron_variant | MODIFIER | HG00280.hp2 HG00544.hp1 HG00544.hp2 others(69): Show |
a0001a0003a0006 | a0001c0001a0001c0009a0003c0008others(1): Show | a0001c0001t0001a0001c0001t0002a0001c0001t0003others(4): Show | a0001c0001t0001g0017 a0001c0001t0001g0021 a0001c0001t0001g0057 others(67): Show |
72 | 314 | 0.2293 | -9 | c.823 others(22): Show |
SS18L1 | ENSG00000184402.15 | transcript | ENST00000331758.8 | protein_coding | 7/10 | INFO_REALIGN_3_PRIME | chr20 | TogoVar | ||||||
SS18L1_chr20_62138769_62187514 | 62169841 | TGTCCACA others(2): Show |
T | intron_variant | MODIFIER | HG00544.hp2 HG00558.hp1 HG00597.hp2 others(79): Show |
a0001a0002a0003 | a0001c0001a0001c0002a0001c0012others(5): Show | a0001c0001t0001a0001c0001t0002a0001c0001t0019others(13): Show | a0001c0001t0001g0154 a0001c0001t0001g0155 a0001c0001t0002g0119 others(79): Show |
82 | 314 | 0.2611 | -9 | c.917 others(26): Show |
SS18L1 | ENSG00000184402.15 | transcript | ENST00000331758.8 | protein_coding | 8/10 | INFO_REALIGN_3_PRIME | chr20 | TogoVar | ||||||
SSBP3_chr1_54220432_54411394 | 54294162 | AGAAAGAA others(2): Show |
A | intron_variant | MODIFIER | HG00642.hp1 HG00738.hp2 HG01192.hp1 others(15): Show |
a0001 | a0001c0001a0001c0002 | a0001c0001t0001a0001c0001t0002a0001c0001t0004others(9): Show | a0001c0001t0001g0104 a0001c0001t0001g0138 a0001c0001t0002g0089 others(15): Show |
18 | 252 | 0.0714 | -9 | c.277 others(28): Show |
SSBP3 | ENSG00000157216.17 | transcript | ENST00000610401.6 | protein_coding | 4/17 | chr1 | TogoVar | |||||||
SSBP3_chr1_54220432_54411394 | 54316664 | ATAAATAA others(2): Show |
A | intron_variant | MODIFIER | HG01070.hp1 HG01071.hp1 HG02293.hp2 |
a0001 | a0001c0001 | a0001c0001t0002a0001c0001t0006a0001c0001t0034 | a0001c0001t0002g0053 a0001c0001t0006g0224 a0001c0001t0034g0052 |
3 | 276 | 0.0109 | -9 | c.277 others(28): Show |
SSBP3 | ENSG00000157216.17 | transcript | ENST00000610401.6 | protein_coding | 4/17 | chr1 | TogoVar | |||||||
SSBP3_chr1_54220432_54411394 | 54383058 | GAAAGAAA others(2): Show |
G | intron_variant | MODIFIER | HG00140.hp1 HG00408.hp2 HG00558.hp1 others(49): Show |
a0001a0002a0003 | a0001c0001a0001c0002a0001c0004others(3): Show | a0001c0001t0001a0001c0001t0002a0001c0001t0003others(21): Show | a0001c0001t0001g0056 a0001c0001t0001g0057 a0001c0001t0001g0064 others(49): Show |
52 | 278 | 0.1871 | -9 | c.276 others(28): Show |
SSBP3 | ENSG00000157216.17 | transcript | ENST00000610401.6 | protein_coding | 4/17 | chr1 | TogoVar | |||||||
SSBP3_chr1_54220432_54411394 | 54407749 | ATTTTTTT others(2): Show |
A | upstream_gene_variant | MODIFIER | HG02083.hp2 HG02717.hp1 HG03942.hp2 others(3): Show |
a0001 | a0001c0001 | a0001c0001t0001a0001c0001t0002a0001c0001t0012others(2): Show | a0001c0001t0001g0022 a0001c0001t0001g0025 a0001c0001t0002g0023 others(3): Show |
6 | 36 | 0.1667 | -9 | c.-17 others(20): Show |
SSBP3 | ENSG00000157216.17 | transcript | ENST00000610401.6 | protein_coding | 1356 | chr1 | TogoVar | |||||||
SSB_chr2_169793871_169817064 | 169797881 | TTGGGGAT others(2): Show |
T | upstream_gene_variant | MODIFIER | HG00099.hp1 HG00099.hp2 HG00140.hp1 others(209): Show |
a0001a0002 | a0001c0001a0002c0004 | a0001c0001t0001a0001c0001t0002a0001c0001t0006others(1): Show | a0001c0001t0001g0002 a0001c0001t0001g0003 a0001c0001t0001g0004 others(90): Show |
212 | 424 | 0.5000 | -9 | c.-11 others(20): Show |
SSB | ENSG00000138385.16 | transcript | ENST00000260956.9 | protein_coding | 989 | chr2 | TogoVar | |||||||
SSC5D_chr19_55483436_55524099 | 55506373 | ATTTTTTT others(2): Show |
A | intron_variant | MODIFIER | HG00140.hp2 HG00323.hp2 HG00408.hp1 others(61): Show |
a0001a0002a0003others(15): Show | a0001c0001a0001c0006a0001c0010others(27): Show | a0001c0001t0001a0001c0006t0001a0001c0010t0001others(29): Show | a0001c0001t0001g0020 a0001c0001t0001g0031 a0001c0001t0001g0032 others(61): Show |
64 | 73 | 0.8767 | -9 | c.278 others(28): Show |
SSC5D | ENSG00000179954.16 | transcript | ENST00000389623.11 | protein_coding | 12/13 | INFO_REALIGN_3_PRIME | chr19 | TogoVar | ||||||
SSH2_chr17_29620938_29935228 | 29895616 | TTATATAT others(2): Show |
T | intron_variant | MODIFIER | HG01433.hp2 NA18522.hp1 NA19043.hp1 |
a0001a0010 | a0001c0001a0010c0018 | a0001c0001t0001a0001c0001t0003a0010c0018t0001 | a0001c0001t0001g0018 a0001c0001t0003g0116 a0010c0018t0001g0079 |
3 | 212 | 0.0142 | -9 | c.63+ others(26): Show |
SSH2 | ENSG00000141298.19 | transcript | ENST00000540801.6 | protein_coding | 1/15 | chr17 | TogoVar | |||||||
SSH2_chr17_29620938_29935228 | 29895656 | TTATATAT others(2): Show |
T | intron_variant | MODIFIER | HG01243.hp1 HG01433.hp2 HG02559.hp1 others(7): Show |
a0001a0002a0010 | a0001c0001a0002c0002a0010c0018 | a0001c0001t0001a0001c0001t0003a0001c0001t0015others(3): Show | a0001c0001t0001g0018 a0001c0001t0001g0047 a0001c0001t0003g0115 others(7): Show |
10 | 217 | 0.0461 | -9 | c.63+ others(26): Show |
SSH2 | ENSG00000141298.19 | transcript | ENST00000540801.6 | protein_coding | 1/15 | chr17 | TogoVar | |||||||
SSH2_chr17_29620938_29935228 | 29895696 | TTATATAT others(2): Show |
T | intron_variant | MODIFIER | HG00280.hp2 HG00323.hp2 HG00408.hp2 others(62): Show |
a0001a0002a0007others(3): Show | a0001c0001a0002c0002a0007c0009others(3): Show | a0001c0001t0001a0001c0001t0003a0001c0001t0007others(11): Show | a0001c0001t0001g0009 a0001c0001t0001g0011 a0001c0001t0001g0013 others(62): Show |
65 | 230 | 0.2826 | -9 | c.63+ others(26): Show |
SSH2 | ENSG00000141298.19 | transcript | ENST00000540801.6 | protein_coding | 1/15 | chr17 | TogoVar | |||||||
SSR2_chr1_156004048_156025951 | 156013425 | CAAAAAGA others(2): Show |
C | intron_variant | MODIFIER | HG00099.hp1 HG00140.hp2 HG00280.hp2 others(18): Show |
a0001 | a0001c0001 | a0001c0001t0001 | a0001c0001t0001g0033 a0001c0001t0001g0034 a0001c0001t0001g0048 others(16): Show |
21 | 354 | 0.0593 | -9 | c.363 others(26): Show |
SSR2 | ENSG00000163479.14 | transcript | ENST00000295702.9 | protein_coding | 4/5 | chr1 | TogoVar | |||||||
SSTR1_chr14_38202904_38218067 | 38205795 | AAATAATA others(2): Show |
A | upstream_gene_variant | MODIFIER | HG01168.hp2 HG02040.hp1 HG02109.hp2 others(1): Show |
a0001a0002 | a0001c0001a0002c0004 | a0001c0001t0001a0001c0001t0006a0002c0004t0030 | a0001c0001t0001g0001 a0001c0001t0006g0001 a0002c0004t0030g0005 |
4 | 47 | 0.0851 | -9 | c.-28 others(20): Show |
SSTR1 | ENSG00000139874.6 | transcript | ENST00000267377.3 | protein_coding | 2108 | chr14 | TogoVar | |||||||
SSTR2_chr17_73160010_73181633 | 73171921 | CAAAAAAA others(2): Show |
C | 3_prime_UTR_variant | MODIFIER | HG02523.hp1 HG02895.hp2 NA18946.hp2 others(5): Show |
a0001 | a0001c0001 | a0001c0001t0030a0001c0001t0127a0001c0001t0128others(3): Show | a0001c0001t0030g0002 a0001c0001t0030g0048 a0001c0001t0127g0033 others(4): Show |
8 | 83 | 0.0964 | -9 | c.*15 others(20): Show |
SSTR2 | ENSG00000180616.9 | transcript | ENST00000357585.4 | protein_coding | 2/2 | 1520 | INFO_REALIGN_3_PRIME | chr17 | TogoVar | |||||
SSTR2_chr17_73160010_73181633 | 73180667 | CTTATTAT others(2): Show |
C | downstream_gene_variant | MODIFIER | HG00280.hp1 HG00323.hp2 HG00423.hp2 others(75): Show |
a0001 | a0001c0001 | a0001c0001t0001a0001c0001t0002a0001c0001t0003others(42): Show | a0001c0001t0001g0001 a0001c0001t0001g0003 a0001c0001t0001g0127 others(62): Show |
78 | 195 | 0.4000 | -9 | c.*10 others(22): Show |
SSTR2 | ENSG00000180616.9 | transcript | ENST00000357585.4 | protein_coding | 4035 | chr17 | TogoVar | |||||||
ST13_chr22_40819535_40861639 | 40858303 | TGCCACGT others(2): Show |
T | upstream_gene_variant | MODIFIER | HG01884.hp1 HG01891.hp1 HG02109.hp2 others(17): Show |
a0001 | a0001c0001 | a0001c0001t0001a0001c0001t0013a0001c0001t0015 | a0001c0001t0001g0005 a0001c0001t0001g0011 a0001c0001t0001g0069 others(12): Show |
20 | 342 | 0.0585 | -9 | c.-17 others(20): Show |
ST13 | ENSG00000100380.15 | transcript | ENST00000216218.8 | protein_coding | 1665 | chr22 | TogoVar | |||||||
ST14_chr11_130154782_130215362 | 130164718 | CTTATTAT others(2): Show |
C | intron_variant | MODIFIER | HG00408.hp1 HG00438.hp2 HG02080.hp1 others(10): Show |
a0001 | a0001c0001a0001c0002 | a0001c0001t0001a0001c0001t0002a0001c0002t0001 | a0001c0001t0001g0009 a0001c0001t0001g0011 a0001c0001t0001g0130 others(8): Show |
13 | 157 | 0.0828 | -9 | c.81+ others(24): Show |
ST14 | ENSG00000149418.11 | transcript | ENST00000278742.6 | protein_coding | 1/18 | INFO_REALIGN_3_PRIME | chr11 | TogoVar | ||||||
ST18_chr8_52105838_52414756 | 52133732 | ATTATTAT others(2): Show |
A | intron_variant | MODIFIER | HG01884.hp1 HG02280.hp1 NA18906.hp1 |
a0002 | a0002c0003 | a0002c0003t0003 | a0002c0003t0003g0022 a0002c0003t0003g0038 a0002c0003t0003g0102 |
3 | 102 | 0.0294 | -9 | c.230 others(26): Show |
ST18 | ENSG00000147488.13 | transcript | ENST00000689386.1 | protein_coding | 19/25 | chr8 | TogoVar | |||||||
ST18_chr8_52105838_52414756 | 52211377 | AATTATTA others(2): Show |
A | intron_variant | MODIFIER | HG01243.hp2 HG01978.hp1 HG02145.hp1 others(5): Show |
a0001a0006 | a0001c0001a0001c0011a0006c0008 | a0001c0001t0001a0001c0001t0011a0001c0011t0001others(1): Show | a0001c0001t0001g0035 a0001c0001t0001g0081 a0001c0001t0001g0086 others(5): Show |
8 | 50 | 0.1600 | -9 | c.86+ others(22): Show |
ST18 | ENSG00000147488.13 | transcript | ENST00000689386.1 | protein_coding | 8/25 | chr8 | TogoVar | |||||||
ST3GAL1_chr8_133449848_133576887 | 133497455 | AATTTTTT others(2): Show |
A | intron_variant | MODIFIER | HG02559.hp1 HG02622.hp1 HG03491.hp1 others(2): Show |
a0001 | a0001c0002a0001c0003a0001c0004 | a0001c0002t0011a0001c0002t0077a0001c0003t0029others(1): Show | a0001c0002t0011g0019 a0001c0002t0077g0304 a0001c0003t0029g0325 others(2): Show |
5 | 39 | 0.1282 | -9 | c.-37 others(28): Show |
ST3GAL1 | ENSG00000008513.17 | transcript | ENST00000522652.6 | protein_coding | 3/9 | chr8 | TogoVar | |||||||
ST3GAL1_chr8_133449848_133576887 | 133531806 | TAAAAACA others(2): Show |
T | intron_variant | MODIFIER | HG00099.hp2 HG00280.hp1 HG00323.hp1 others(116): Show |
a0001a0002a0003others(2): Show | a0001c0001a0001c0002a0001c0003others(8): Show | a0001c0001t0001a0001c0001t0003a0001c0001t0014others(44): Show | a0001c0001t0001g0011 a0001c0001t0001g0025 a0001c0001t0001g0026 others(116): Show |
119 | 305 | 0.3902 | -9 | c.-42 others(30): Show |
ST3GAL1 | ENSG00000008513.17 | transcript | ENST00000522652.6 | protein_coding | 2/9 | chr8 | TogoVar | |||||||
ST3GAL2_chr16_70370977_70444100 | 70389202 | CAAAAAAA others(2): Show |
C | intron_variant | MODIFIER | HG02280.hp2 HG02572.hp1 HG02615.hp2 others(6): Show |
a0001 | a0001c0001 | a0001c0001t0003a0001c0001t0008a0001c0001t0011others(2): Show | a0001c0001t0003g0187 a0001c0001t0008g0098 a0001c0001t0008g0099 others(6): Show |
9 | 21 | 0.4286 | -9 | c.534 others(24): Show |
ST3GAL2 | ENSG00000157350.13 | transcript | ENST00000342907.3 | protein_coding | 3/6 | chr16 | TogoVar | |||||||
ST3GAL2_chr16_70370977_70444100 | 70403134 | CAGGTGGT others(2): Show |
C | intron_variant | MODIFIER | HG01433.hp1 HG02055.hp2 HG02109.hp1 others(31): Show |
a0001 | a0001c0001a0001c0004 | a0001c0001t0007a0001c0001t0010a0001c0001t0026others(14): Show | a0001c0001t0007g0287 a0001c0001t0007g0288 a0001c0001t0007g0289 others(31): Show |
34 | 310 | 0.1097 | -9 | c.-10 others(30): Show |
ST3GAL2 | ENSG00000157350.13 | transcript | ENST00000342907.3 | protein_coding | 1/6 | chr16 | TogoVar | |||||||
ST3GAL2_chr16_70370977_70444100 | 70408890 | CAAAAAAA others(2): Show |
C | intron_variant | MODIFIER | HG00438.hp2 HG00735.hp2 HG01192.hp1 others(9): Show |
a0001 | a0001c0001 | a0001c0001t0001a0001c0001t0003a0001c0001t0007others(6): Show | a0001c0001t0001g0101 a0001c0001t0003g0148 a0001c0001t0007g0288 others(9): Show |
12 | 30 | 0.4000 | -9 | c.-10 others(30): Show |
ST3GAL2 | ENSG00000157350.13 | transcript | ENST00000342907.3 | protein_coding | 1/6 | chr16 | TogoVar | |||||||
ST3GAL2_chr16_70370977_70444100 | 70413560 | CAAAAAAA others(2): Show |
C | intron_variant | MODIFIER | HG01433.hp1 HG02258.hp1 HG02559.hp2 others(9): Show |
a0001 | a0001c0001a0001c0004 | a0001c0001t0010a0001c0001t0026a0001c0001t0043others(4): Show | a0001c0001t0010g0277 a0001c0001t0010g0279 a0001c0001t0010g0280 others(9): Show |
12 | 221 | 0.0543 | -9 | c.-10 others(32): Show |
ST3GAL2 | ENSG00000157350.13 | transcript | ENST00000342907.3 | protein_coding | 1/6 | chr16 | TogoVar | |||||||
ST3GAL3_chr1_43702536_43936159 | 43817416 | CCTTCTCC others(2): Show |
C | intron_variant | MODIFIER | HG00099.hp1 HG00323.hp1 HG00408.hp1 others(159): Show |
a0001 | a0001c0001 | a0001c0001t0001a0001c0001t0002a0001c0001t0003others(6): Show | a0001c0001t0001g0002 a0001c0001t0001g0029 a0001c0001t0001g0039 others(159): Show |
162 | 271 | 0.5978 | -9 | c.209 others(26): Show |
ST3GAL3 | ENSG00000126091.21 | transcript | ENST00000347631.8 | protein_coding | 4/11 | INFO_REALIGN_3_PRIME | chr1 | TogoVar | ||||||
ST3GAL3_chr1_43702536_43936159 | 43875897 | CTCTTCTT others(2): Show |
C | intron_variant | MODIFIER | HG02559.hp1 HG02698.hp2 NA19002.hp1 |
a0001 | a0001c0001 | a0001c0001t0001 | a0001c0001t0001g0150 a0001c0001t0001g0170 a0001c0001t0001g0257 |
3 | 151 | 0.0199 | -9 | c.303 others(28): Show |
ST3GAL3 | ENSG00000126091.21 | transcript | ENST00000347631.8 | protein_coding | 5/11 | INFO_REALIGN_3_PRIME | chr1 | TogoVar | ||||||
ST3GAL3_chr1_43702536_43936159 | 43875950 | CTTATTAT others(2): Show |
C | intron_variant | MODIFIER | HG00323.hp2 HG00735.hp2 |
a0001 | a0001c0001 | a0001c0001t0002 | a0001c0001t0002g0163 a0001c0001t0002g0167 |
2 | 202 | 0.0099 | -9 | c.303 others(28): Show |
ST3GAL3 | ENSG00000126091.21 | transcript | ENST00000347631.8 | protein_coding | 5/11 | INFO_REALIGN_3_PRIME | chr1 | TogoVar | ||||||
ST3GAL3_chr1_43702536_43936159 | 43917482 | AATATATA others(2): Show |
A | intron_variant | MODIFIER | HG02572.hp2 HG03471.hp1 NA18522.hp1 others(1): Show |
a0001 | a0001c0001 | a0001c0001t0001 | a0001c0001t0001g0061 a0001c0001t0001g0062 a0001c0001t0001g0065 others(1): Show |
4 | 271 | 0.0148 | -9 | c.745 others(26): Show |
ST3GAL3 | ENSG00000126091.21 | transcript | ENST00000347631.8 | protein_coding | 9/11 | INFO_REALIGN_3_PRIME | chr1 | TogoVar | ||||||
ST3GAL6_chr3_98758340_98800852 | 98766405 | CTTTTTTT others(2): Show |
C | intron_variant | MODIFIER | HG01175.hp1 HG02145.hp1 HG02723.hp2 others(4): Show |
a0001a0003 | a0001c0001a0003c0003 | a0001c0001t0003a0001c0001t0004a0001c0001t0005others(1): Show | a0001c0001t0003g0070 a0001c0001t0003g0071 a0001c0001t0003g0072 others(4): Show |
7 | 112 | 0.0625 | -9 | c.-11 others(26): Show |
ST3GAL6 | ENSG00000064225.13 | transcript | ENST00000483910.6 | protein_coding | 1/9 | INFO_REALIGN_3_PRIME | chr3 | TogoVar | ||||||
ST6GAL1_chr3_186925526_187083553 | 187048880 | ATTTTTTT others(2): Show |
A | intron_variant | MODIFIER | HG00408.hp1 HG00423.hp1 HG00438.hp1 others(60): Show |
a0001 | a0001c0001a0001c0002 | a0001c0001t0001a0001c0001t0002a0001c0001t0003others(21): Show | a0001c0001t0001g0130 a0001c0001t0001g0167 a0001c0001t0001g0171 others(60): Show |
63 | 113 | 0.5575 | -9 | c.608 others(26): Show |
ST6GAL1 | ENSG00000073849.16 | transcript | ENST00000169298.8 | protein_coding | 4/7 | INFO_REALIGN_3_PRIME | chr3 | TogoVar | ||||||
ST6GAL2_chr2_106796600_106891167 | 106803612 | TAACAACA others(2): Show |
T | 3_prime_UTR_variant | MODIFIER | HG01192.hp1 HG01258.hp2 HG02572.hp2 others(10): Show |
a0001a0002a0004others(1): Show | a0001c0001a0001c0004a0001c0030others(3): Show | a0001c0001t0075a0001c0004t0049a0001c0030t0061others(5): Show | a0001c0001t0075g0088 a0001c0004t0049g0302 a0001c0030t0061g0015 others(10): Show |
13 | 56 | 0.2321 | -9 | c.*30 others(20): Show |
ST6GAL2 | ENSG00000144057.16 | transcript | ENST00000409382.8 | protein_coding | 6/6 | 3057 | chr2 | TogoVar | ||||||
ST6GAL2_chr2_106796600_106891167 | 106846041 | GTCCCAGC others(2): Show |
G | intron_variant | MODIFIER | HG00099.hp1 HG00099.hp2 HG00140.hp1 others(332): Show |
a0001a0002a0003others(11): Show | a0001c0001a0001c0003a0001c0004others(29): Show | a0001c0001t0001a0001c0001t0002a0001c0001t0005others(130): Show | a0001c0001t0001g0070 a0001c0001t0001g0315 a0001c0001t0002g0008 others(321): Show |
335 | 370 | 0.9054 | -9 | c.-57 others(26): Show |
ST6GAL2 | ENSG00000144057.16 | transcript | ENST00000409382.8 | protein_coding | 1/5 | chr2 | TogoVar | |||||||
ST6GAL2_chr2_106796600_106891167 | 106888577 | CAAAAAAA others(2): Show |
C | upstream_gene_variant | MODIFIER | HG00423.hp1 HG00738.hp2 HG00741.hp1 others(23): Show |
a0001a0002a0003others(5): Show | a0001c0001a0001c0003a0001c0004others(9): Show | a0001c0001t0009a0001c0001t0017a0001c0003t0003others(14): Show | a0001c0001t0009g0297 a0001c0001t0009g0318 a0001c0001t0017g0154 others(22): Show |
26 | 133 | 0.1955 | -9 | c.-25 others(20): Show |
ST6GAL2 | ENSG00000144057.16 | transcript | ENST00000409382.8 | protein_coding | 2411 | chr2 | TogoVar | |||||||
ST6GALNAC3_chr1_76069746_76639603 | 76099566 | CAGACATG others(2): Show |
C | intron_variant | MODIFIER | HG01109.hp1 HG02145.hp2 HG02257.hp1 others(17): Show |
a0001a0002 | a0001c0001a0001c0003a0002c0002 | a0001c0001t0002a0001c0001t0003a0001c0001t0006others(5): Show | a0001c0001t0002g0047 a0001c0001t0002g0057 a0001c0001t0002g0058 others(17): Show |
20 | 102 | 0.1961 | -9 | c.18+ others(26): Show |
ST6GALNAC3 | ENSG00000184005.12 | transcript | ENST00000328299.4 | protein_coding | 1/4 | INFO_REALIGN_3_PRIME | chr1 | TogoVar | ||||||
ST6GALNAC3_chr1_76069746_76639603 | 76441088 | CAAAAAAA others(2): Show |
C | intron_variant | MODIFIER | HG00639.hp2 HG01074.hp1 HG01891.hp1 others(19): Show |
a0001a0002a0003 | a0001c0001a0001c0003a0002c0002others(2): Show | a0001c0001t0002a0001c0001t0006a0001c0003t0002others(9): Show | a0001c0001t0002g0057 a0001c0001t0002g0058 a0001c0001t0002g0065 others(19): Show |
22 | 57 | 0.3860 | -9 | c.623 others(28): Show |
ST6GALNAC3 | ENSG00000184005.12 | transcript | ENST00000328299.4 | protein_coding | 3/4 | INFO_REALIGN_3_PRIME | chr1 | TogoVar | ||||||
ST6GALNAC3_chr1_76069746_76639603 | 76585043 | CTTGGGAT others(2): Show |
C | intron_variant | MODIFIER | HG02055.hp1 HG02145.hp2 HG02280.hp2 others(9): Show |
a0001a0002a0003 | a0001c0001a0001c0003a0002c0002others(2): Show | a0001c0001t0002a0001c0003t0002a0001c0003t0005others(3): Show | a0001c0001t0002g0011 a0001c0001t0002g0019 a0001c0001t0002g0058 others(9): Show |
12 | 102 | 0.1176 | -9 | c.624 others(28): Show |
ST6GALNAC3 | ENSG00000184005.12 | transcript | ENST00000328299.4 | protein_coding | 3/4 | INFO_REALIGN_3_PRIME | chr1 | TogoVar | ||||||
ST6GALNAC3_chr1_76069746_76639603 | 76605861 | TAAAAAAA others(2): Show |
T | intron_variant | MODIFIER | HG00639.hp1 HG01891.hp1 HG01891.hp2 others(3): Show |
a0001a0002 | a0001c0001a0001c0003a0002c0002 | a0001c0001t0002a0001c0001t0004a0001c0003t0003others(1): Show | a0001c0001t0002g0088 a0001c0001t0004g0017 a0001c0001t0004g0094 others(3): Show |
6 | 12 | 0.5000 | -9 | c.624 others(28): Show |
ST6GALNAC3 | ENSG00000184005.12 | transcript | ENST00000328299.4 | protein_coding | 3/4 | INFO_REALIGN_3_PRIME | chr1 | TogoVar | ||||||
ST6GALNAC6_chr9_127880321_127904603 | 127902565 | CATTATTA others(2): Show |
C | upstream_gene_variant | MODIFIER | HG00642.hp1 HG01071.hp1 HG01071.hp2 others(10): Show |
a0001a0004a0005 | a0001c0001a0004c0006a0005c0007 | a0001c0001t0001a0004c0006t0001a0005c0007t0001 | a0001c0001t0001g0001 a0001c0001t0001g0004 a0001c0001t0001g0012 others(8): Show |
13 | 64 | 0.2031 | -9 | c.-31 others(20): Show |
ST6GALNAC6 | ENSG00000160408.16 | transcript | ENST00000373146.6 | protein_coding | 2963 | chr9 | TogoVar | |||||||
ST7L_chr1_112518514_112624141 | 112535394 | TAAGAAGA others(2): Show |
T | intron_variant | MODIFIER | HG00438.hp1 HG00673.hp2 HG01433.hp1 others(34): Show |
a0001a0009 | a0001c0001a0001c0005a0001c0007others(1): Show | a0001c0001t0003a0001c0005t0003a0001c0007t0003others(1): Show | a0001c0001t0003g0053 a0001c0001t0003g0205 a0001c0001t0003g0206 others(34): Show |
37 | 355 | 0.1042 | -9 | c.162 others(28): Show |
ST7L | ENSG00000007341.19 | transcript | ENST00000358039.9 | protein_coding | 14/14 | chr1 | TogoVar | |||||||
ST7_chr7_116948501_117235176 | 117013902 | CTAGAATT others(2): Show |
C | intron_variant | MODIFIER | HG02109.hp1 HG03098.hp1 HG03130.hp1 |
a0001 | a0001c0001 | a0001c0001t0001 | a0001c0001t0001g0090 a0001c0001t0001g0091 a0001c0001t0001g0097 |
3 | 186 | 0.0161 | -9 | c.151 others(28): Show |
ST7 | ENSG00000004866.22 | transcript | ENST00000323984.8 | protein_coding | 1/15 | INFO_REALIGN_3_PRIME | chr7 | TogoVar | ||||||
ST7_chr7_116948501_117235176 | 117097904 | ATATATTT others(2): Show |
A | intron_variant | MODIFIER | HG02109.hp1 HG02622.hp1 HG02647.hp2 others(2): Show |
a0001 | a0001c0001 | a0001c0001t0001 | a0001c0001t0001g0086 a0001c0001t0001g0089 a0001c0001t0001g0091 others(2): Show |
5 | 182 | 0.0275 | -9 | c.152 others(26): Show |
ST7 | ENSG00000004866.22 | transcript | ENST00000323984.8 | protein_coding | 1/15 | INFO_REALIGN_3_PRIME | chr7 | TogoVar | ||||||
ST8SIA1_chr12_22188391_22339707 | 22257378 | ATTTTTTT others(2): Show |
A | intron_variant | MODIFIER | HG00738.hp2 HG01256.hp2 HG01943.hp1 others(35): Show |
a0001a0004 | a0001c0001a0004c0005 | a0001c0001t0003a0001c0001t0006a0001c0001t0017others(29): Show | a0001c0001t0003g0131 a0001c0001t0006g0054 a0001c0001t0006g0055 others(35): Show |
38 | 148 | 0.2568 | -9 | c.382 others(26): Show |
ST8SIA1 | ENSG00000111728.11 | transcript | ENST00000396037.9 | protein_coding | 2/4 | chr12 | TogoVar | |||||||
ST8SIA1_chr12_22188391_22339707 | 22321003 | GAAGAAAG others(2): Show |
G | intron_variant | MODIFIER | HG00642.hp1 HG01081.hp1 HG01192.hp2 others(19): Show |
a0001 | a0001c0001a0001c0002 | a0001c0001t0003a0001c0001t0009a0001c0001t0010others(17): Show | a0001c0001t0003g0094 a0001c0001t0009g0096 a0001c0001t0009g0107 others(19): Show |
22 | 182 | 0.1209 | -9 | c.236 others(28): Show |
ST8SIA1 | ENSG00000111728.11 | transcript | ENST00000396037.9 | protein_coding | 1/4 | chr12 | TogoVar | |||||||
ST8SIA4_chr5_100801933_100908282 | 100864574 | CAAAAAAA others(2): Show |
C | intron_variant | MODIFIER | HG00099.hp1 HG00280.hp2 HG00423.hp2 others(75): Show |
a0001a0003 | a0001c0001a0003c0002 | a0001c0001t0001a0001c0001t0006a0001c0001t0008others(9): Show | a0001c0001t0001g0001 a0001c0001t0001g0008 a0001c0001t0001g0009 others(66): Show |
78 | 183 | 0.4262 | -9 | c.504 others(26): Show |
ST8SIA4 | ENSG00000113532.13 | transcript | ENST00000231461.10 | protein_coding | 3/4 | chr5 | TogoVar | |||||||
ST8SIA5_chr18_46662821_46762053 | 46725973 | ATATATAT others(2): Show |
A | intron_variant | MODIFIER | HG01069.hp2 NA18954.hp1 NA18979.hp2 others(4): Show |
a0001 | a0001c0001 | a0001c0001t0002a0001c0001t0015a0001c0001t0021others(1): Show | a0001c0001t0002g0084 a0001c0001t0015g0202 a0001c0001t0015g0203 others(4): Show |
7 | 315 | 0.0222 | -9 | c.132 others(28): Show |
ST8SIA5 | ENSG00000101638.14 | transcript | ENST00000315087.12 | protein_coding | 1/6 | chr18 | TogoVar | |||||||
ST8SIA6_chr10_17310421_17459595 | 17368407 | CAAAAAAA others(2): Show |
C | intron_variant | MODIFIER | HG00099.hp1 HG00099.hp2 HG00280.hp1 others(118): Show |
a0001a0002a0003 | a0001c0001a0001c0006a0002c0002others(1): Show | a0001c0001t0001a0001c0001t0002a0001c0001t0003others(23): Show | a0001c0001t0001g0061 a0001c0001t0001g0074 a0001c0001t0001g0075 others(117): Show |
121 | 146 | 0.8288 | -9 | c.291 others(26): Show |
ST8SIA6 | ENSG00000148488.17 | transcript | ENST00000377602.5 | protein_coding | 3/7 | chr10 | TogoVar | |||||||
ST8SIA6_chr10_17310421_17459595 | 17374459 | ATTATAGG others(2): Show |
A | intron_variant | MODIFIER | HG00099.hp1 HG00099.hp2 HG00140.hp1 others(155): Show |
a0001a0002a0003others(1): Show | a0001c0001a0001c0003a0001c0006others(3): Show | a0001c0001t0001a0001c0001t0002a0001c0001t0003others(28): Show | a0001c0001t0001g0059 a0001c0001t0001g0060 a0001c0001t0001g0061 others(154): Show |
158 | 294 | 0.5374 | -9 | c.291 others(28): Show |
ST8SIA6 | ENSG00000148488.17 | transcript | ENST00000377602.5 | protein_coding | 3/7 | chr10 | TogoVar |