Joint Open Genome and Omics Platform (JoGo)

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Snpeff annotation impact detail

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regionname	pos	ref	alt	annotation	impact	samples	ahapids	chapids	thapids	thapids	ac	an	af	len	hgvs_c	genename	geneid	featuretype	featureid	transcript_biotype	rank	distance	status	chr	external
SGIP1_chr1_66529153_66756139	66630904	A A	AAGAAGGG others(4): Show AAGAAGGGAGGG	intron_variant intron_variant	MODIFIER	HG02615.hp2 HG02615.hp2	a0002 a0002	a0002c0002 a0002c0002	a0002c0002t0011 a0002c0002t0011	a0002c0002t0011g0250 a0002c0002t0011g0250	1	302	0.0033	11	c.75- others(26): Show c.75-2164_75-2163insAAGGGAGGGAG	SGIP1	ENSG00000118473.23	transcript	ENST00000371037.9	protein_coding	2/24		INFO_REALIGN_3_PRIME	chr1	TogoVar
SGIP1_chr1_66529153_66756139	66631100	A A	AAAGAAAG others(4): Show AAAGAAAGAAAG	intron_variant intron_variant	MODIFIER	HG02602.hp2 HG02818.hp1 HG02602.hp2 HG02818.hp1	a0002 a0002	a0002c0002 a0002c0003 a0002c0002 a0002c0003	a0002c0002t0003 a0002c0003t0053 a0002c0002t0003 a0002c0003t0053	a0002c0002t0003g0244 a0002c0003t0053g0144 a0002c0002t0003g0244 a0002c0003t0053g0144	2	302	0.0066	11	c.75- others(26): Show c.75-1968_75-1967insGAAAGAAAGAA	SGIP1	ENSG00000118473.23	transcript	ENST00000371037.9	protein_coding	2/24		INFO_REALIGN_3_PRIME	chr1	TogoVar
SGIP1_chr1_66529153_66756139	66659950	A A	AAGAAAAA others(4): Show AAGAAAAAAAAG	intron_variant intron_variant	MODIFIER	HG00140.hp1 HG01168.hp2 HG01192.hp1 others(2): Show HG00140.hp1 HG01168.hp2 HG01192.hp1 HG03225.hp2 NA19058.hp2	a0001 a0001	a0001c0001 a0001c0004 a0001c0001 a0001c0004	a0001c0001t0001 a0001c0001t0012 a0001c0004t0001 a0001c0001t0001 a0001c0001t0012 a0001c0004t0001	a0001c0001t0001g0109 a0001c0001t0001g0138 a0001c0001t0012g0102 others(2): Show a0001c0001t0001g0109 a0001c0001t0001g0138 a0001c0001t0012g0102 a0001c0001t0012g0106 a0001c0004t0001g0009	5	302	0.0166	11	c.460 others(26): Show c.460-562_460-561insGAAAAAAAAGA	SGIP1	ENSG00000118473.23	transcript	ENST00000371037.9	protein_coding	7/24		INFO_REALIGN_3_PRIME	chr1	TogoVar
SGIP1_chr1_66529153_66756139	66659950	A A	AAGAAAAG others(4): Show AAGAAAAGAAAG	intron_variant intron_variant	MODIFIER	NA19005.hp1 NA19005.hp1	a0002 a0002	a0002c0002 a0002c0002	a0002c0002t0050 a0002c0002t0050	a0002c0002t0050g0295 a0002c0002t0050g0295	1	302	0.0033	11	c.460 others(26): Show c.460-562_460-561insGAAAAGAAAGA	SGIP1	ENSG00000118473.23	transcript	ENST00000371037.9	protein_coding	7/24		INFO_REALIGN_3_PRIME	chr1	TogoVar
SGIP1_chr1_66529153_66756139	66660043	G G	GAAAAAGA others(4): Show GAAAAAGAAAGA	intron_variant intron_variant	MODIFIER	HG00423.hp2 HG00558.hp1 HG00639.hp1 others(19): Show HG00423.hp2 HG00558.hp1 HG00639.hp1 HG00639.hp2 HG01109.hp2 HG01175.hp1 HG01257.hp1 HG02109.hp2 HG02300.hp1 HG02559.hp1 HG02735.hp2 HG02922.hp2 HG02965.hp2 HG03453.hp2 HG03669.hp2 HG03834.hp2 NA18969.hp1 NA18986.hp2 NA19006.hp1 NA19012.hp1 NA19064.hp2 NA19081.hp1	a0001 a0002 a0001 a0002	a0001c0001 a0001c0007 a0002c0002 a0001c0001 a0001c0007 a0002c0002	a0001c0001t0001 a0001c0001t0002 a0001c0001t0003 others(5): Show a0001c0001t0001 a0001c0001t0002 a0001c0001t0003 a0001c0001t0007 a0001c0001t0011 a0001c0001t0014 a0001c0007t0004 a0002c0002t0001	a0001c0001t0001g0079 a0001c0001t0001g0082 a0001c0001t0001g0100 others(19): Show a0001c0001t0001g0079 a0001c0001t0001g0082 a0001c0001t0001g0100 a0001c0001t0001g0178 a0001c0001t0001g0183 a0001c0001t0001g0185 a0001c0001t0001g0186 a0001c0001t0001g0187 a0001c0001t0001g0188 a0001c0001t0001g0189 a0001c0001t0001g0270 a0001c0001t0002g0096 a0001c0001t0003g0171 a0001c0001t0003g0174 a0001c0001t0007g0182 a0001c0001t0011g0165 a0001c0001t0014g0071 a0001c0001t0014g0131 a0001c0007t0004g0117 a0001c0007t0004g0118 a0001c0007t0004g0119 a0002c0002t0001g0252	22	302	0.0729	11	c.460 others(26): Show c.460-467_460-466insAAGAAAGAAAA	SGIP1	ENSG00000118473.23	transcript	ENST00000371037.9	protein_coding	7/24		INFO_REALIGN_3_PRIME	chr1	TogoVar
SGIP1_chr1_66529153_66756139	66660063	A A	AAGAAAGG others(4): Show AAGAAAGGAAAG	intron_variant intron_variant	MODIFIER	NA18961.hp1 NA18961.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0002 a0001c0001t0002	a0001c0001t0002g0022 a0001c0001t0002g0022	1	302	0.0033	11	c.460 others(26): Show c.460-450_460-449insAGAAAGGAAAG	SGIP1	ENSG00000118473.23	transcript	ENST00000371037.9	protein_coding	7/24			chr1	TogoVar
SGIP1_chr1_66529153_66756139	66675537	C C	CTTTTTTT others(4): Show CTTTTTTTTTTT	intron_variant intron_variant	MODIFIER	HG03041.hp1 HG03041.hp1	a0002 a0002	a0002c0006 a0002c0006	a0002c0006t0002 a0002c0006t0002	a0002c0006t0002g0212 a0002c0006t0002g0212	1	302	0.0033	11	c.647 others(28): Show c.647-1464_647-1463insTTTTTTTTTTT	SGIP1	ENSG00000118473.23	transcript	ENST00000371037.9	protein_coding	12/24		INFO_REALIGN_3_PRIME	chr1	TogoVar
SGIP1_chr1_66529153_66756139	66683700	C C	CTTTTTTT others(4): Show CTTTTTTTTTTT	intron_variant intron_variant	MODIFIER	HG00642.hp2 HG03490.hp1 NA18994.hp2 others(3): Show HG00642.hp2 HG03490.hp1 NA18994.hp2 NA19079.hp2 NA19085.hp1 NA19085.hp2	a0001 a0002 a0005 a0001 a0002 a0005	a0001c0001 a0002c0002 a0005c0010 a0001c0001 a0002c0002 a0005c0010	a0001c0001t0010 a0001c0001t0017 a0002c0002t0001 others(3): Show a0001c0001t0010 a0001c0001t0017 a0002c0002t0001 a0002c0002t0003 a0002c0002t0049 a0005c0010t0013	a0001c0001t0010g0023 a0001c0001t0017g0033 a0002c0002t0001g0275 others(3): Show a0001c0001t0010g0023 a0001c0001t0017g0033 a0002c0002t0001g0275 a0002c0002t0003g0300 a0002c0002t0049g0288 a0005c0010t0013g0243	6	302	0.0199	11	c.131 others(30): Show c.1315+1349_1315+1359dupTTTTTTTTTTT	SGIP1	ENSG00000118473.23	transcript	ENST00000371037.9	protein_coding	15/24		INFO_REALIGN_3_PRIME	chr1	TogoVar
SGIP1_chr1_66529153_66756139	66695255	T T	TAAAAAAA others(4): Show TAAAAAAAAAAA	intron_variant intron_variant	MODIFIER	HG00099.hp2 HG00140.hp2 HG00408.hp1 others(113): Show HG00099.hp2 HG00140.hp2 HG00408.hp1 HG00408.hp2 HG00423.hp1 HG00423.hp2 HG00438.hp1 HG00558.hp1 HG00558.hp2 HG00597.hp1 HG00597.hp2 HG00621.hp1 HG00642.hp1 HG00642.hp2 HG00733.hp1 HG00741.hp2 HG01069.hp2 HG01070.hp2 HG01071.hp2 HG01081.hp2 HG01099.hp1 HG01106.hp1 HG01123.hp1 HG01243.hp1 HG01255.hp1 HG01358.hp1 HG01496.hp2 HG01515.hp1 HG01943.hp2 HG02015.hp2 HG02055.hp2 HG02056.hp1 HG02056.hp2 HG02132.hp2 HG02148.hp1 HG02148.hp2 HG02155.hp2 HG02257.hp2 HG02300.hp2 HG02523.hp1 HG02523.hp2 HG02559.hp1 HG02602.hp2 HG02615.hp1 HG02615.hp2 HG02647.hp2 HG02683.hp2 HG02717.hp2 HG02723.hp1 HG02735.hp1 HG02809.hp1 HG02896.hp1 HG02896.hp2 HG02976.hp1 HG02976.hp2 HG03130.hp1 HG03130.hp2 HG03195.hp1 HG03195.hp2 HG03225.hp1 HG03486.hp1 HG03490.hp1 HG03492.hp1 HG03492.hp2 HG03579.hp1 HG03654.hp1 HG03688.hp2 HG03710.hp1 HG03927.hp1 HG03942.hp1 HG04199.hp1 HG04228.hp2 HG06807.hp2 NA18906.hp2 NA18944.hp2 NA18948.hp1 NA18949.hp1 NA18950.hp2 NA18956.hp1 NA18956.hp2 NA18957.hp2 NA18959.hp1 NA18959.hp2 NA18961.hp1 NA18961.hp2 NA18969.hp1 NA18972.hp1 NA18974.hp1 NA18983.hp1 NA18983.hp2 NA18984.hp2 NA18986.hp2 NA18991.hp2 NA19002.hp1 NA19002.hp2 NA19005.hp1 NA19005.hp2 NA19010.hp2 NA19011.hp2 NA19012.hp2 NA19030.hp2 NA19043.hp2 NA19056.hp2 NA19058.hp1 NA19064.hp1 NA19065.hp1 NA19074.hp1 NA19079.hp2 NA19081.hp2 NA19083.hp1 NA19087.hp2 NA19088.hp2 NA19091.hp1 NA19091.hp2 NA20129.hp1 NA20752.hp1	a0001 a0002 a0005 others(2): Show a0001 a0002 a0005 a0007 a0009	a0001c0001 a0001c0008 a0002c0002 others(4): Show a0001c0001 a0001c0008 a0002c0002 a0002c0003 a0005c0010 a0007c0016 a0009c0018	a0001c0001t0001 a0001c0001t0002 a0001c0001t0003 others(36): Show a0001c0001t0001 a0001c0001t0002 a0001c0001t0003 a0001c0001t0004 a0001c0001t0007 a0001c0001t0008 a0001c0001t0010 a0001c0001t0011 a0001c0001t0016 a0001c0001t0017 a0001c0001t0021 a0001c0001t0023 a0001c0001t0024 a0001c0001t0026 a0001c0001t0028 a0001c0001t0039 a0001c0001t0042 a0001c0001t0043 a0001c0001t0046 a0001c0001t0047 a0001c0001t0062 a0001c0008t0002 a0002c0002t0001 a0002c0002t0002 a0002c0002t0003 a0002c0002t0009 a0002c0002t0011 a0002c0002t0013 a0002c0002t0021 a0002c0002t0026 a0002c0002t0037 a0002c0002t0038 a0002c0002t0048 a0002c0002t0049 a0002c0002t0050 a0002c0003t0003 a0005c0010t0013 a0007c0016t0023 a0009c0018t0003	a0001c0001t0001g0032 a0001c0001t0001g0080 a0001c0001t0001g0132 others(113): Show a0001c0001t0001g0032 a0001c0001t0001g0080 a0001c0001t0001g0132 a0001c0001t0002g0004 a0001c0001t0002g0005 a0001c0001t0002g0022 a0001c0001t0002g0026 a0001c0001t0002g0027 a0001c0001t0002g0030 a0001c0001t0002g0031 a0001c0001t0002g0035 a0001c0001t0002g0036 a0001c0001t0002g0040 a0001c0001t0002g0044 a0001c0001t0002g0045 a0001c0001t0002g0046 a0001c0001t0002g0054 a0001c0001t0002g0057 a0001c0001t0002g0059 a0001c0001t0002g0061 a0001c0001t0002g0063 a0001c0001t0002g0075 a0001c0001t0002g0083 a0001c0001t0002g0084 a0001c0001t0002g0096 a0001c0001t0002g0128 a0001c0001t0002g0134 a0001c0001t0002g0143 a0001c0001t0002g0264 a0001c0001t0003g0025 a0001c0001t0003g0037 a0001c0001t0003g0068 a0001c0001t0003g0171 a0001c0001t0003g0174 a0001c0001t0003g0197 a0001c0001t0004g0205 a0001c0001t0007g0056 a0001c0001t0007g0182 a0001c0001t0008g0157 a0001c0001t0008g0158 a0001c0001t0008g0159 a0001c0001t0008g0160 a0001c0001t0008g0161 a0001c0001t0008g0162 a0001c0001t0010g0023 a0001c0001t0010g0024 a0001c0001t0010g0028 a0001c0001t0010g0050 a0001c0001t0011g0165 a0001c0001t0011g0255 a0001c0001t0016g0038 a0001c0001t0016g0147 a0001c0001t0016g0153 a0001c0001t0017g0034 a0001c0001t0021g0048 a0001c0001t0023g0113 a0001c0001t0024g0001 a0001c0001t0026g0207 a0001c0001t0028g0302 a0001c0001t0039g0073 a0001c0001t0042g0007 a0001c0001t0043g0194 a0001c0001t0046g0072 a0001c0001t0047g0039 a0001c0001t0062g0257 a0001c0008t0002g0195 a0002c0002t0001g0289 a0002c0002t0002g0139 a0002c0002t0003g0015 a0002c0002t0003g0016 a0002c0002t0003g0166 a0002c0002t0003g0239 a0002c0002t0003g0240 a0002c0002t0003g0244 a0002c0002t0003g0245 a0002c0002t0003g0248 a0002c0002t0003g0260 a0002c0002t0003g0266 a0002c0002t0003g0268 a0002c0002t0003g0272 a0002c0002t0003g0273 a0002c0002t0003g0274 a0002c0002t0003g0276 a0002c0002t0003g0277 a0002c0002t0003g0279 a0002c0002t0003g0284 a0002c0002t0003g0285 a0002c0002t0003g0287 a0002c0002t0003g0290 a0002c0002t0003g0293 a0002c0002t0003g0294 a0002c0002t0003g0296 a0002c0002t0009g0011 a0002c0002t0009g0012 a0002c0002t0009g0017 a0002c0002t0009g0135 a0002c0002t0009g0259 a0002c0002t0011g0250 a0002c0002t0011g0253 a0002c0002t0011g0256 a0002c0002t0013g0241 a0002c0002t0013g0247 a0002c0002t0021g0299 a0002c0002t0026g0249 a0002c0002t0037g0111 a0002c0002t0038g0269 a0002c0002t0048g0280 a0002c0002t0049g0288 a0002c0002t0050g0295 a0002c0003t0003g0145 a0002c0003t0003g0150 a0002c0003t0003g0151 a0005c0010t0013g0242 a0005c0010t0013g0243 a0007c0016t0023g0097 a0009c0018t0003g0265	116	302	0.3841	11	c.157 others(28): Show c.1571-173_1571-163dupAAAAAAAAAAA	SGIP1	ENSG00000118473.23	transcript	ENST00000371037.9	protein_coding	17/24		INFO_REALIGN_3_PRIME	chr1	TogoVar
SGIP1_chr1_66529153_66756139	66742460	C C	CTTTTTTT others(4): Show CTTTTTTTTTTT	intron_variant intron_variant	MODIFIER	HG00639.hp1 HG00639.hp1	a0001 a0001	a0001c0007 a0001c0007	a0001c0007t0004 a0001c0007t0004	a0001c0007t0004g0117 a0001c0007t0004g0117	1	302	0.0033	11	c.246 others(28): Show c.2465-596_2465-586dupTTTTTTTTTTT	SGIP1	ENSG00000118473.23	transcript	ENST00000371037.9	protein_coding	24/24		INFO_REALIGN_3_PRIME	chr1	TogoVar
SGK1_chr6_134164256_134323112	134189205	G G	GGGTGTGT others(4): Show GGGTGTGTGTGT	intron_variant intron_variant	MODIFIER	NA18979.hp2 NA18979.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0067 a0001c0001t0001g0067	1	250	0.0040	11	c.362 others(30): Show c.362-14620_362-14619insACACACACACC	SGK1	ENSG00000118515.12	transcript	ENST00000367858.10	protein_coding	3/13			chr6	TogoVar
SGK1_chr6_134164256_134323112	134191835	A A	ATTTTTTT others(4): Show ATTTTTTTTTTT	intron_variant intron_variant	MODIFIER	HG00099.hp2 HG00140.hp2 HG00280.hp2 others(74): Show HG00099.hp2 HG00140.hp2 HG00280.hp2 HG00558.hp2 HG00597.hp1 HG00597.hp2 HG00621.hp1 HG00621.hp2 HG00642.hp1 HG01069.hp2 HG01074.hp2 HG01081.hp2 HG01099.hp1 HG01169.hp2 HG01243.hp1 HG01243.hp2 HG01261.hp1 HG01261.hp2 HG01433.hp1 HG01433.hp2 HG01517.hp1 HG01952.hp1 HG01952.hp2 HG01981.hp2 HG02015.hp1 HG02074.hp2 HG02083.hp2 HG02109.hp1 HG02109.hp2 HG02135.hp2 HG02155.hp1 HG02258.hp1 HG02258.hp2 HG02602.hp2 HG02735.hp1 HG02818.hp1 HG02818.hp2 HG02886.hp2 HG02895.hp2 HG02896.hp1 HG02897.hp1 HG03139.hp2 HG03195.hp1 HG03225.hp2 HG03239.hp1 HG03239.hp2 HG03654.hp1 HG03688.hp1 HG03704.hp1 HG06807.hp1 NA18522.hp1 NA18906.hp1 NA18906.hp2 NA18943.hp1 NA18945.hp1 NA18945.hp2 NA18959.hp1 NA18959.hp2 NA18979.hp1 NA18982.hp1 NA18982.hp2 NA19002.hp1 NA19010.hp2 NA19043.hp2 NA19056.hp1 NA19062.hp1 NA19062.hp2 NA19078.hp1 NA19082.hp2 NA19090.hp2 NA20129.hp1 NA20129.hp2 NA20752.hp1 NA20752.hp2 NA20905.hp1 NA21309.hp1 homoSapiens_chm13v2.hp1	a0001 a0002 a0003 others(2): Show a0001 a0002 a0003 a0005 a0006	a0001c0001 a0001c0002 a0001c0005 others(4): Show a0001c0001 a0001c0002 a0001c0005 a0002c0004 a0003c0012 a0005c0013 a0006c0010	a0001c0001t0001 a0001c0001t0002 a0001c0001t0003 others(11): Show a0001c0001t0001 a0001c0001t0002 a0001c0001t0003 a0001c0001t0004 a0001c0001t0005 a0001c0001t0013 a0001c0002t0001 a0001c0002t0002 a0001c0002t0003 a0001c0005t0002 a0002c0004t0001 a0003c0012t0001 a0005c0013t0003 a0006c0010t0001	a0001c0001t0001g0017 a0001c0001t0001g0018 a0001c0001t0001g0020 others(74): Show a0001c0001t0001g0017 a0001c0001t0001g0018 a0001c0001t0001g0020 a0001c0001t0001g0030 a0001c0001t0001g0031 a0001c0001t0001g0033 a0001c0001t0001g0041 a0001c0001t0001g0042 a0001c0001t0001g0044 a0001c0001t0001g0045 a0001c0001t0001g0049 a0001c0001t0001g0050 a0001c0001t0001g0058 a0001c0001t0001g0059 a0001c0001t0001g0061 a0001c0001t0001g0065 a0001c0001t0001g0066 a0001c0001t0001g0071 a0001c0001t0001g0080 a0001c0001t0001g0086 a0001c0001t0001g0090 a0001c0001t0001g0093 a0001c0001t0001g0094 a0001c0001t0001g0095 a0001c0001t0001g0100 a0001c0001t0001g0104 a0001c0001t0001g0107 a0001c0001t0001g0108 a0001c0001t0001g0110 a0001c0001t0001g0118 a0001c0001t0001g0125 a0001c0001t0001g0127 a0001c0001t0001g0130 a0001c0001t0001g0131 a0001c0001t0001g0141 a0001c0001t0001g0142 a0001c0001t0001g0144 a0001c0001t0001g0147 a0001c0001t0001g0154 a0001c0001t0001g0158 a0001c0001t0001g0162 a0001c0001t0001g0164 a0001c0001t0001g0168 a0001c0001t0001g0175 a0001c0001t0001g0183 a0001c0001t0001g0184 a0001c0001t0001g0193 a0001c0001t0001g0211 a0001c0001t0001g0212 a0001c0001t0001g0213 a0001c0001t0001g0214 a0001c0001t0001g0215 a0001c0001t0001g0217 a0001c0001t0001g0227 a0001c0001t0001g0229 a0001c0001t0001g0230 a0001c0001t0001g0234 a0001c0001t0001g0241 a0001c0001t0002g0155 a0001c0001t0002g0180 a0001c0001t0002g0205 a0001c0001t0002g0221 a0001c0001t0002g0225 a0001c0001t0003g0010 a0001c0001t0003g0012 a0001c0001t0004g0077 a0001c0001t0004g0126 a0001c0001t0005g0181 a0001c0001t0013g0249 a0001c0002t0001g0115 a0001c0002t0002g0122 a0001c0002t0003g0011 a0001c0005t0002g0165 a0002c0004t0001g0134 a0003c0012t0001g0101 a0005c0013t0003g0009 a0006c0010t0001g0047	77	250	0.3080	11	c.361 others(30): Show c.361+15510_361+15520dupAAAAAAAAAAA	SGK1	ENSG00000118515.12	transcript	ENST00000367858.10	protein_coding	3/13			chr6	TogoVar
SGK1_chr6_134164256_134323112	134206383	A A	ATATATAT others(4): Show ATATATATATTT	intron_variant intron_variant	MODIFIER	NA18943.hp1 NA18943.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0049 a0001c0001t0001g0049	1	250	0.0040	11	c.361 others(26): Show c.361+972_361+973insAAATATATATA	SGK1	ENSG00000118515.12	transcript	ENST00000367858.10	protein_coding	3/13			chr6	TogoVar
SGK1_chr6_134164256_134323112	134206383	A A	ATATATAT others(4): Show ATATATATTTTT	intron_variant intron_variant	MODIFIER	HG02735.hp1 NA19056.hp1 HG02735.hp1 NA19056.hp1	a0001 a0002 a0001 a0002	a0001c0001 a0002c0004 a0001c0001 a0002c0004	a0001c0001t0001 a0002c0004t0001 a0001c0001t0001 a0002c0004t0001	a0001c0001t0001g0104 a0002c0004t0001g0134 a0001c0001t0001g0104 a0002c0004t0001g0134	2	250	0.0080	11	c.361 others(26): Show c.361+972_361+973insAAAAATATATA	SGK1	ENSG00000118515.12	transcript	ENST00000367858.10	protein_coding	3/13			chr6	TogoVar
SGK1_chr6_134164256_134323112	134206383	A A	ATATTTTT others(4): Show ATATTTTTTTTT	intron_variant intron_variant	MODIFIER	HG00738.hp1 HG01346.hp2 HG02015.hp1 others(2): Show HG00738.hp1 HG01346.hp2 HG02015.hp1 HG03688.hp2 HG03704.hp1	a0001 a0005 a0001 a0005	a0001c0001 a0005c0013 a0001c0001 a0005c0013	a0001c0001t0001 a0005c0013t0003 a0001c0001t0001 a0005c0013t0003	a0001c0001t0001g0021 a0001c0001t0001g0045 a0001c0001t0001g0085 others(2): Show a0001c0001t0001g0021 a0001c0001t0001g0045 a0001c0001t0001g0085 a0001c0001t0001g0135 a0005c0013t0003g0009	5	250	0.0200	11	c.361 others(26): Show c.361+972_361+973insAAAAAAAAATA	SGK1	ENSG00000118515.12	transcript	ENST00000367858.10	protein_coding	3/13			chr6	TogoVar
SGK1_chr6_134164256_134323112	134220058	C C	CAAAAAAA others(4): Show CAAAAAAAAAAA	intron_variant intron_variant	MODIFIER	HG00738.hp1 HG01106.hp2 HG02135.hp1 others(4): Show HG00738.hp1 HG01106.hp2 HG02135.hp1 HG02135.hp2 HG03654.hp2 NA18979.hp2 NA19056.hp2	a0001 a0001	a0001c0001 a0001c0002 a0001c0001 a0001c0002	a0001c0001t0001 a0001c0002t0001 a0001c0002t0002 a0001c0001t0001 a0001c0002t0001 a0001c0002t0002	a0001c0001t0001g0044 a0001c0001t0001g0067 a0001c0001t0001g0083 others(4): Show a0001c0001t0001g0044 a0001c0001t0001g0067 a0001c0001t0001g0083 a0001c0001t0001g0085 a0001c0002t0001g0032 a0001c0002t0001g0174 a0001c0002t0002g0084	7	250	0.0280	11	c.286 others(30): Show c.286-12638_286-12628dupTTTTTTTTTTT	SGK1	ENSG00000118515.12	transcript	ENST00000367858.10	protein_coding	2/13			chr6	TogoVar
SGK1_chr6_134164256_134323112	134232413	G G	GAAAAGAA others(4): Show GAAAAGAAAGAA	intron_variant intron_variant	MODIFIER	HG00558.hp2 HG00738.hp1 HG01175.hp1 others(8): Show HG00558.hp2 HG00738.hp1 HG01175.hp1 HG01496.hp1 HG01934.hp1 HG02071.hp1 HG02083.hp1 HG04199.hp2 NA18950.hp2 NA18979.hp2 NA19005.hp1	a0001 a0001	a0001c0001 a0001c0002 a0001c0003 a0001c0001 a0001c0002 a0001c0003	a0001c0001t0001 a0001c0001t0003 a0001c0002t0001 others(1): Show a0001c0001t0001 a0001c0001t0003 a0001c0002t0001 a0001c0003t0001	a0001c0001t0001g0050 a0001c0001t0001g0067 a0001c0001t0001g0085 others(8): Show a0001c0001t0001g0050 a0001c0001t0001g0067 a0001c0001t0001g0085 a0001c0001t0001g0092 a0001c0001t0001g0113 a0001c0001t0001g0137 a0001c0001t0001g0206 a0001c0001t0003g0007 a0001c0002t0001g0072 a0001c0002t0001g0097 a0001c0003t0001g0105	11	250	0.0440	11	c.286 others(30): Show c.286-24983_286-24982insTTCTTTCTTTT	SGK1	ENSG00000118515.12	transcript	ENST00000367858.10	protein_coding	2/13			chr6	TogoVar
SGK1_chr6_134164256_134323112	134235541	T T	TTTATTTA others(4): Show TTTATTTATTTA	intron_variant intron_variant	MODIFIER	HG03704.hp1 HG03704.hp1	a0005 a0005	a0005c0013 a0005c0013	a0005c0013t0003 a0005c0013t0003	a0005c0013t0003g0009 a0005c0013t0003g0009	1	250	0.0040	11	c.285 others(30): Show c.285+26391_285+26392insTAAATAAATAA	SGK1	ENSG00000118515.12	transcript	ENST00000367858.10	protein_coding	2/13			chr6	TogoVar
SGK1_chr6_134164256_134323112	134273592	C C	CAAAAAAA others(4): Show CAAAAAAAAAAA	intron_variant intron_variant	MODIFIER	HG01346.hp2 HG02896.hp2 NA19030.hp1 others(1): Show HG01346.hp2 HG02896.hp2 NA19030.hp1 NA21309.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0002 a0001c0001t0001 a0001c0001t0002	a0001c0001t0001g0021 a0001c0001t0001g0240 a0001c0001t0002g0133 others(1): Show a0001c0001t0001g0021 a0001c0001t0001g0240 a0001c0001t0002g0133 a0001c0001t0002g0221	4	250	0.0160	11	c.70- others(28): Show c.70-11455_70-11445dupTTTTTTTTTTT	SGK1	ENSG00000118515.12	transcript	ENST00000367858.10	protein_coding	1/13			chr6	TogoVar
SGK2_chr20_43554027_43590627	43563135	C C	CAAAAAAA others(4): Show CAAAAAAAAAAA	intron_variant intron_variant	MODIFIER	NA18946.hp1 NA18946.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0286 a0001c0001t0001g0286	1	416	0.0024	11	c.-23 others(28): Show c.-23-3334_-23-3324dupAAAAAAAAAAA	SGK2	ENSG00000101049.18	transcript	ENST00000373100.7	protein_coding	1/12		INFO_REALIGN_3_PRIME	chr20	TogoVar
SGMS1_chr10_50300600_50628956	50449817	C C	CCATTAGA others(4): Show CCATTAGACTAT	intron_variant intron_variant	MODIFIER	HG00408.hp1 HG00544.hp2 HG00673.hp2 others(62): Show HG00408.hp1 HG00544.hp2 HG00673.hp2 HG00735.hp1 HG00738.hp1 HG00741.hp2 HG01081.hp1 HG01123.hp1 HG01884.hp2 HG01943.hp1 HG02004.hp1 HG02015.hp2 HG02074.hp2 HG02257.hp1 HG02273.hp2 HG02280.hp2 HG02300.hp2 HG02451.hp2 HG02523.hp2 HG02602.hp1 HG02622.hp1 HG02683.hp1 HG02886.hp2 HG02895.hp2 HG02922.hp2 HG03098.hp2 HG03195.hp2 HG03225.hp2 HG03471.hp2 HG03516.hp2 HG03540.hp1 HG03579.hp1 HG03942.hp2 HG04115.hp2 HG04199.hp2 HG04204.hp1 NA18939.hp1 NA18940.hp1 NA18949.hp2 NA18960.hp1 NA18961.hp2 NA18964.hp1 NA18965.hp2 NA18966.hp1 NA18977.hp1 NA18978.hp2 NA18980.hp1 NA18983.hp2 NA18992.hp2 NA19000.hp2 NA19004.hp2 NA19007.hp2 NA19012.hp2 NA19030.hp1 NA19043.hp2 NA19064.hp1 NA19066.hp1 NA19074.hp2 NA19083.hp2 NA19084.hp2 NA19085.hp2 NA19087.hp1 NA19091.hp2 NA19240.hp2 NA20129.hp2	a0001 a0002 a0001 a0002	a0001c0001 a0001c0002 a0001c0006 others(1): Show a0001c0001 a0001c0002 a0001c0006 a0002c0005	a0001c0001t0001 a0001c0001t0002 a0001c0001t0004 others(6): Show a0001c0001t0001 a0001c0001t0002 a0001c0001t0004 a0001c0001t0009 a0001c0001t0013 a0001c0002t0001 a0001c0002t0002 a0001c0006t0001 a0002c0005t0001	a0001c0001t0001g0014 a0001c0001t0001g0020 a0001c0001t0001g0022 others(62): Show a0001c0001t0001g0014 a0001c0001t0001g0020 a0001c0001t0001g0022 a0001c0001t0001g0023 a0001c0001t0001g0024 a0001c0001t0001g0040 a0001c0001t0001g0042 a0001c0001t0001g0052 a0001c0001t0001g0136 a0001c0001t0001g0146 a0001c0001t0001g0148 a0001c0001t0001g0149 a0001c0001t0001g0150 a0001c0001t0001g0151 a0001c0001t0001g0152 a0001c0001t0001g0153 a0001c0001t0001g0156 a0001c0001t0001g0157 a0001c0001t0001g0159 a0001c0001t0001g0160 a0001c0001t0001g0161 a0001c0001t0001g0163 a0001c0001t0001g0165 a0001c0001t0001g0166 a0001c0001t0001g0167 a0001c0001t0001g0168 a0001c0001t0001g0169 a0001c0001t0001g0170 a0001c0001t0001g0171 a0001c0001t0001g0172 a0001c0001t0001g0173 a0001c0001t0001g0175 a0001c0001t0001g0176 a0001c0001t0001g0177 a0001c0001t0001g0178 a0001c0001t0001g0179 a0001c0001t0001g0180 a0001c0001t0001g0181 a0001c0001t0001g0182 a0001c0001t0001g0183 a0001c0001t0001g0184 a0001c0001t0001g0186 a0001c0001t0001g0189 a0001c0001t0001g0190 a0001c0001t0001g0197 a0001c0001t0001g0250 a0001c0001t0001g0272 a0001c0001t0001g0279 a0001c0001t0001g0285 a0001c0001t0001g0302 a0001c0001t0002g0043 a0001c0001t0004g0013 a0001c0001t0004g0044 a0001c0001t0009g0133 a0001c0001t0013g0174 a0001c0002t0001g0012 a0001c0002t0001g0039 a0001c0002t0002g0016 a0001c0002t0002g0018 a0001c0002t0002g0027 a0001c0002t0002g0028 a0001c0002t0002g0041 a0001c0002t0002g0266 a0001c0006t0001g0164 a0002c0005t0001g0144	65	312	0.2083	11	c.-31 others(32): Show c.-313+10855_-313+10856insATAGTCTAATG	SGMS1	ENSG00000198964.14	transcript	ENST00000361781.7	protein_coding	5/10			chr10	TogoVar
SGMS1_chr10_50300600_50628956	50626638	A A	ACCCCCCC others(4): Show ACCCCCCCCCCC	upstream_gene_variant upstream_gene_variant	MODIFIER	NA19064.hp2 NA19064.hp2	a0001 a0001	a0001c0002 a0001c0002	a0001c0002t0002 a0001c0002t0002	a0001c0002t0002g0274 a0001c0002t0002g0274	1	312	0.0032	11	c.-36 others(22): Show c.-3616_-3615insGGGGGGGGGGG	SGMS1	ENSG00000198964.14	transcript	ENST00000361781.7	protein_coding		2683		chr10	TogoVar
SGMS2_chr4_107819932_107920047	107902289	C C	CAAAAAAA others(4): Show CAAAAAAAAAAA	intron_variant intron_variant	MODIFIER	NA20129.hp2 NA20129.hp2	a0001 a0001	a0001c0005 a0001c0005	a0001c0005t0031 a0001c0005t0031	a0001c0005t0031g0012 a0001c0005t0031g0012	1	270	0.0037	11	c.574 others(26): Show c.574-942_574-932dupAAAAAAAAAAA	SGMS2	ENSG00000164023.15	transcript	ENST00000690982.1	protein_coding	4/6		INFO_REALIGN_3_PRIME	chr4	TogoVar
SGO1_chr3_20164484_20191206	20177332	A A	ACATAAGT others(4): Show ACATAAGTTTGT	intron_variant intron_variant	MODIFIER	HG00099.hp1 HG00140.hp1 HG00280.hp2 others(174): Show HG00099.hp1 HG00140.hp1 HG00280.hp2 HG00408.hp1 HG00408.hp2 HG00423.hp1 HG00438.hp1 HG00558.hp1 HG00558.hp2 HG00597.hp2 HG00609.hp2 HG00642.hp2 HG00673.hp1 HG00733.hp2 HG00738.hp2 HG00741.hp2 HG01074.hp2 HG01081.hp2 HG01099.hp2 HG01109.hp1 HG01109.hp2 HG01123.hp2 HG01175.hp1 HG01192.hp2 HG01243.hp2 HG01255.hp2 HG01256.hp1 HG01257.hp2 HG01261.hp2 HG01346.hp1 HG01346.hp2 HG01358.hp2 HG01361.hp1 HG01361.hp2 HG01433.hp1 HG01515.hp2 HG01891.hp2 HG01928.hp2 HG01934.hp1 HG01934.hp2 HG01952.hp1 HG01975.hp1 HG01978.hp2 HG01993.hp1 HG02015.hp1 HG02015.hp2 HG02055.hp2 HG02129.hp1 HG02135.hp1 HG02145.hp1 HG02145.hp2 HG02165.hp2 HG02257.hp1 HG02258.hp1 HG02258.hp2 HG02280.hp2 HG02293.hp2 HG02300.hp2 HG02486.hp2 HG02523.hp2 HG02572.hp2 HG02615.hp1 HG02615.hp2 HG02622.hp2 HG02630.hp2 HG02683.hp1 HG02698.hp1 HG02717.hp2 HG02735.hp1 HG02886.hp2 HG02895.hp1 HG02895.hp2 HG02896.hp1 HG02897.hp1 HG02922.hp2 HG02965.hp1 HG02965.hp2 HG02970.hp1 HG03041.hp1 HG03098.hp1 HG03098.hp2 HG03130.hp1 HG03130.hp2 HG03139.hp1 HG03139.hp2 HG03453.hp1 HG03471.hp2 HG03486.hp2 HG03491.hp1 HG03492.hp2 HG03669.hp2 HG03688.hp2 HG03710.hp2 HG03927.hp1 HG03927.hp2 HG03942.hp1 HG03942.hp2 HG04184.hp2 HG04204.hp1 NA18522.hp2 NA18612.hp2 NA18747.hp1 NA18906.hp1 NA18906.hp2 NA18939.hp1 NA18939.hp2 NA18940.hp2 NA18941.hp1 NA18944.hp1 NA18945.hp1 NA18947.hp1 NA18948.hp2 NA18952.hp1 NA18953.hp1 NA18955.hp1 NA18956.hp2 NA18960.hp1 NA18962.hp1 NA18962.hp2 NA18965.hp2 NA18967.hp1 NA18967.hp2 NA18969.hp1 NA18969.hp2 NA18975.hp1 NA18979.hp1 NA18979.hp2 NA18980.hp1 NA18983.hp2 NA18986.hp2 NA18988.hp2 NA18990.hp1 NA18992.hp2 NA18993.hp1 NA18993.hp2 NA18994.hp1 NA18995.hp1 NA18995.hp2 NA18997.hp1 NA18997.hp2 NA18998.hp1 NA19000.hp1 NA19001.hp1 NA19002.hp2 NA19004.hp1 NA19007.hp2 NA19009.hp2 NA19012.hp1 NA19030.hp1 NA19030.hp2 NA19043.hp1 NA19043.hp2 NA19054.hp2 NA19056.hp1 NA19057.hp2 NA19059.hp1 NA19060.hp1 NA19062.hp1 NA19062.hp2 NA19063.hp1 NA19065.hp1 NA19066.hp2 NA19068.hp1 NA19072.hp1 NA19074.hp1 NA19075.hp2 NA19078.hp1 NA19079.hp1 NA19080.hp2 NA19081.hp2 NA19082.hp1 NA19083.hp2 NA19088.hp1 NA19089.hp2 NA19240.hp2 NA20805.hp1 NA21309.hp1	a0001 a0002 a0003 others(4): Show a0001 a0002 a0003 a0004 a0005 a0006 a0008	a0001c0001 a0001c0003 a0001c0007 others(7): Show a0001c0001 a0001c0003 a0001c0007 a0002c0004 a0003c0005 a0004c0010 a0004c0011 a0005c0012 a0006c0014 a0008c0008	a0001c0001t0001 a0001c0001t0004 a0001c0001t0005 others(18): Show a0001c0001t0001 a0001c0001t0004 a0001c0001t0005 a0001c0001t0006 a0001c0001t0013 a0001c0001t0014 a0001c0001t0019 a0001c0001t0023 a0001c0001t0024 a0001c0001t0025 a0001c0003t0002 a0001c0003t0010 a0001c0003t0026 a0001c0007t0018 a0002c0004t0009 a0003c0005t0011 a0004c0010t0001 a0004c0011t0001 a0005c0012t0004 a0006c0014t0013 a0008c0008t0002	a0001c0001t0001g0004 a0001c0001t0001g0030 a0001c0001t0001g0037 others(78): Show a0001c0001t0001g0004 a0001c0001t0001g0030 a0001c0001t0001g0037 a0001c0001t0001g0048 a0001c0001t0001g0079 a0001c0001t0001g0118 a0001c0001t0001g0125 a0001c0001t0001g0129 a0001c0001t0001g0131 a0001c0001t0001g0133 a0001c0001t0001g0134 a0001c0001t0001g0135 a0001c0001t0001g0138 a0001c0001t0001g0156 a0001c0001t0001g0157 a0001c0001t0001g0158 a0001c0001t0004g0007 a0001c0001t0004g0010 a0001c0001t0004g0049 a0001c0001t0004g0141 a0001c0001t0004g0142 a0001c0001t0004g0143 a0001c0001t0004g0144 a0001c0001t0004g0146 a0001c0001t0004g0148 a0001c0001t0005g0012 a0001c0001t0005g0019 a0001c0001t0005g0047 a0001c0001t0005g0120 a0001c0001t0005g0121 a0001c0001t0005g0122 a0001c0001t0005g0123 a0001c0001t0005g0124 a0001c0001t0005g0139 a0001c0001t0005g0140 a0001c0001t0006g0008 a0001c0001t0006g0126 a0001c0001t0006g0127 a0001c0001t0006g0128 a0001c0001t0006g0130 a0001c0001t0006g0136 a0001c0001t0006g0137 a0001c0001t0013g0046 a0001c0001t0014g0025 a0001c0001t0019g0116 a0001c0001t0023g0147 a0001c0001t0024g0132 a0001c0001t0025g0161 a0001c0003t0002g0003 a0001c0003t0002g0013 a0001c0003t0002g0024 a0001c0003t0002g0033 a0001c0003t0002g0034 a0001c0003t0002g0058 a0001c0003t0002g0059 a0001c0003t0002g0060 a0001c0003t0002g0063 a0001c0003t0002g0064 a0001c0003t0002g0065 a0001c0003t0002g0066 a0001c0003t0002g0067 a0001c0003t0002g0068 a0001c0003t0002g0069 a0001c0003t0002g0070 a0001c0003t0002g0080 a0001c0003t0010g0023 a0001c0003t0010g0062 a0001c0003t0026g0162 a0001c0007t0018g0117 a0002c0004t0009g0050 a0002c0004t0009g0051 a0002c0004t0009g0149 a0002c0004t0009g0150 a0002c0004t0009g0151 a0003c0005t0011g0032 a0003c0005t0011g0052 a0004c0010t0001g0081 a0004c0011t0001g0160 a0005c0012t0004g0145 a0006c0014t0013g0119 a0008c0008t0002g0057	177	430	0.4116	11	c.417 others(26): Show c.417-674_417-673insACAAACTTATG	SGO1	ENSG00000129810.15	transcript	ENST00000412997.6	protein_coding	4/7			chr3	TogoVar
SGO2_chr2_200521207_200589096	200570510	G G	GTGTGTGT others(4): Show GTGTGTGTGTGT	intron_variant intron_variant	MODIFIER	HG03927.hp2 HG03927.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0225 a0001c0001t0001g0225	1	384	0.0026	11	c.704 others(26): Show c.704-540_704-539insTGTGTGTGTGT	SGO2	ENSG00000163535.18	transcript	ENST00000357799.9	protein_coding	6/8			chr2	TogoVar
SGO2_chr2_200521207_200589096	200588726	C C	CTTTTTTT others(4): Show CTTTTTTTTTTT	downstream_gene_variant downstream_gene_variant	MODIFIER	HG01884.hp1 HG01884.hp1	a0010 a0010	a0010c0021 a0010c0021	a0010c0021t0001 a0010c0021t0001	a0010c0021t0001g0093 a0010c0021t0001g0093	1	384	0.0026	11	c.52 others(22): Show c.5262_*5263insTTTTTTTTTTT	SGO2	ENSG00000163535.18	transcript	ENST00000357799.9	protein_coding		4631		chr2	TogoVar
SGPL1_chr10_70810948_70886184	70835735	C C	CAAAAAAA others(4): Show CAAAAAAAAAAA	intron_variant intron_variant	MODIFIER	HG01192.hp1 HG03654.hp1 HG01192.hp1 HG03654.hp1	a0001 a0001	a0001c0006 a0001c0006	a0001c0006t0019 a0001c0006t0019	a0001c0006t0019g0055 a0001c0006t0019g0056 a0001c0006t0019g0055 a0001c0006t0019g0056	2	402	0.0050	11	c.28- others(26): Show c.28-8730_28-8720dupAAAAAAAAAAA	SGPL1	ENSG00000166224.18	transcript	ENST00000373202.8	protein_coding	2/14		INFO_REALIGN_3_PRIME	chr10	TogoVar
SGPP2_chr2_222419543_222567621	222422285	C C	CAAAAAAA others(4): Show CAAAAAAAAAAA	upstream_gene_variant upstream_gene_variant	MODIFIER	HG01099.hp1 HG01099.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0003 a0001c0001t0003	a0001c0001t0003g0042 a0001c0001t0003g0042	1	272	0.0037	11	c.-23 others(22): Show c.-2318_-2317insAAAAAAAAAAA	SGPP2	ENSG00000163082.10	transcript	ENST00000321276.8	protein_coding		2257		chr2	TogoVar
SGPP2_chr2_222419543_222567621	222473924	C C	CAAAAAAA others(4): Show CAAAAAAAAAAA	intron_variant intron_variant	MODIFIER	HG00280.hp1 HG00280.hp2 HG00408.hp1 others(89): Show HG00280.hp1 HG00280.hp2 HG00408.hp1 HG00408.hp2 HG00609.hp1 HG00609.hp2 HG00639.hp2 HG01081.hp2 HG01099.hp1 HG01123.hp2 HG01256.hp2 HG01261.hp1 HG01261.hp2 HG01891.hp2 HG01928.hp1 HG01928.hp2 HG01934.hp2 HG01952.hp1 HG01952.hp2 HG01975.hp2 HG02004.hp1 HG02004.hp2 HG02015.hp2 HG02083.hp2 HG02109.hp1 HG02109.hp2 HG02132.hp2 HG02523.hp1 HG02622.hp1 HG02622.hp2 HG02717.hp1 HG02738.hp1 HG02895.hp1 HG02922.hp1 HG03098.hp2 HG03130.hp1 HG03139.hp1 HG03225.hp1 HG03453.hp1 HG03490.hp1 HG03491.hp1 HG03491.hp2 HG03492.hp2 HG03540.hp2 HG03669.hp2 HG03704.hp1 HG03710.hp2 HG03834.hp2 HG04184.hp1 HG04199.hp2 HG04204.hp1 HG06807.hp1 NA18522.hp2 NA18942.hp2 NA18946.hp2 NA18957.hp1 NA18957.hp2 NA18960.hp2 NA18964.hp1 NA18964.hp2 NA18965.hp2 NA18966.hp2 NA18967.hp1 NA18968.hp1 NA18968.hp2 NA18971.hp2 NA18975.hp1 NA18980.hp1 NA18982.hp2 NA18984.hp1 NA18984.hp2 NA19002.hp1 NA19003.hp1 NA19005.hp2 NA19009.hp2 NA19010.hp1 NA19056.hp2 NA19060.hp1 NA19065.hp1 NA19065.hp2 NA19066.hp1 NA19070.hp1 NA19070.hp2 NA19072.hp1 NA19074.hp1 NA19077.hp1 NA19086.hp1 NA19086.hp2 NA19089.hp2 NA20129.hp2 NA20300.hp1 NA20905.hp1	a0001 a0002 a0003 others(1): Show a0001 a0002 a0003 a0004	a0001c0001 a0001c0002 a0001c0003 others(10): Show a0001c0001 a0001c0002 a0001c0003 a0001c0004 a0001c0005 a0001c0006 a0001c0007 a0001c0009 a0001c0010 a0001c0013 a0002c0008 a0003c0012 a0004c0014	a0001c0001t0001 a0001c0001t0002 a0001c0001t0003 others(51): Show a0001c0001t0001 a0001c0001t0002 a0001c0001t0003 a0001c0001t0004 a0001c0001t0005 a0001c0001t0006 a0001c0001t0007 a0001c0001t0008 a0001c0001t0011 a0001c0001t0012 a0001c0001t0013 a0001c0001t0014 a0001c0001t0016 a0001c0001t0020 a0001c0001t0021 a0001c0001t0024 a0001c0001t0029 a0001c0001t0030 a0001c0001t0032 a0001c0001t0038 a0001c0001t0048 a0001c0001t0052 a0001c0001t0055 a0001c0001t0058 a0001c0001t0061 a0001c0001t0062 a0001c0001t0063 a0001c0001t0064 a0001c0001t0084 a0001c0001t0099 a0001c0001t0100 a0001c0002t0009 a0001c0002t0025 a0001c0002t0035 a0001c0002t0037 a0001c0002t0083 a0001c0003t0027 a0001c0003t0049 a0001c0003t0051 a0001c0004t0073 a0001c0004t0075 a0001c0004t0076 a0001c0005t0074 a0001c0005t0089 a0001c0006t0022 a0001c0006t0043 a0001c0007t0019 a0001c0009t0001 a0001c0010t0018 a0001c0013t0009 a0002c0008t0005 a0002c0008t0023 a0003c0012t0001 a0004c0014t0044	a0001c0001t0001g0063 a0001c0001t0001g0087 a0001c0001t0001g0101 others(89): Show a0001c0001t0001g0063 a0001c0001t0001g0087 a0001c0001t0001g0101 a0001c0001t0001g0103 a0001c0001t0001g0120 a0001c0001t0001g0121 a0001c0001t0001g0137 a0001c0001t0001g0140 a0001c0001t0001g0143 a0001c0001t0001g0147 a0001c0001t0001g0270 a0001c0001t0001g0271 a0001c0001t0002g0034 a0001c0001t0002g0088 a0001c0001t0002g0106 a0001c0001t0002g0144 a0001c0001t0002g0202 a0001c0001t0002g0232 a0001c0001t0002g0249 a0001c0001t0002g0257 a0001c0001t0003g0028 a0001c0001t0003g0042 a0001c0001t0003g0069 a0001c0001t0003g0077 a0001c0001t0003g0171 a0001c0001t0003g0196 a0001c0001t0004g0008 a0001c0001t0004g0138 a0001c0001t0004g0167 a0001c0001t0005g0109 a0001c0001t0006g0073 a0001c0001t0006g0092 a0001c0001t0006g0172 a0001c0001t0007g0049 a0001c0001t0007g0058 a0001c0001t0007g0059 a0001c0001t0007g0115 a0001c0001t0007g0170 a0001c0001t0007g0248 a0001c0001t0008g0006 a0001c0001t0008g0036 a0001c0001t0008g0195 a0001c0001t0011g0231 a0001c0001t0012g0253 a0001c0001t0013g0045 a0001c0001t0014g0022 a0001c0001t0014g0102 a0001c0001t0016g0030 a0001c0001t0020g0191 a0001c0001t0021g0229 a0001c0001t0024g0104 a0001c0001t0024g0124 a0001c0001t0029g0149 a0001c0001t0030g0100 a0001c0001t0032g0182 a0001c0001t0038g0215 a0001c0001t0048g0113 a0001c0001t0052g0136 a0001c0001t0055g0098 a0001c0001t0058g0209 a0001c0001t0061g0048 a0001c0001t0062g0054 a0001c0001t0063g0095 a0001c0001t0064g0060 a0001c0001t0084g0267 a0001c0001t0099g0207 a0001c0001t0100g0093 a0001c0002t0009g0119 a0001c0002t0009g0225 a0001c0002t0025g0228 a0001c0002t0035g0187 a0001c0002t0037g0268 a0001c0002t0083g0150 a0001c0003t0027g0032 a0001c0003t0049g0161 a0001c0003t0051g0247 a0001c0004t0073g0009 a0001c0004t0075g0265 a0001c0004t0076g0266 a0001c0005t0074g0226 a0001c0005t0089g0111 a0001c0006t0022g0181 a0001c0006t0043g0122 a0001c0007t0019g0013 a0001c0007t0019g0159 a0001c0009t0001g0044 a0001c0010t0018g0259 a0001c0013t0009g0033 a0002c0008t0005g0096 a0002c0008t0023g0168 a0003c0012t0001g0166 a0004c0014t0044g0051	92	272	0.3382	11	c.220 others(26): Show c.220-641_220-631dupAAAAAAAAAAA	SGPP2	ENSG00000163082.10	transcript	ENST00000321276.8	protein_coding	1/4		INFO_REALIGN_3_PRIME	chr2	TogoVar
SGSM1_chr22_24801211_24932578	24822088	C C	CTCTTTTT others(4): Show CTCTTTTTTTTT	intron_variant intron_variant	MODIFIER	NA19088.hp1 NA19088.hp2 NA19088.hp1 NA19088.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0002 a0001c0001t0001 a0001c0001t0002	a0001c0001t0001g0092 a0001c0001t0002g0257 a0001c0001t0001g0092 a0001c0001t0002g0257	2	338	0.0059	11	c.63+ others(28): Show c.63+15605_63+15606insCTTTTTTTTTT	SGSM1	ENSG00000167037.19	transcript	ENST00000400358.9	protein_coding	2/24		INFO_REALIGN_3_PRIME	chr22	TogoVar
SGSM1_chr22_24801211_24932578	24845945	C C	CTTTTCTT others(4): Show CTTTTCTTTTCT	intron_variant intron_variant	MODIFIER	HG02559.hp2 HG03130.hp1 HG03453.hp2 others(1): Show HG02559.hp2 HG03130.hp1 HG03453.hp2 NA19043.hp2	a0001 a0003 a0001 a0003	a0001c0001 a0003c0008 a0003c0033 a0001c0001 a0003c0008 a0003c0033	a0001c0001t0003 a0003c0008t0001 a0003c0033t0031 a0001c0001t0003 a0003c0008t0001 a0003c0033t0031	a0001c0001t0003g0002 a0001c0001t0003g0003 a0003c0008t0001g0004 others(1): Show a0001c0001t0003g0002 a0001c0001t0003g0003 a0003c0008t0001g0004 a0003c0033t0031g0290	4	338	0.0118	11	c.139 others(26): Show c.139+976_139+977insTCTTTTCTTTT	SGSM1	ENSG00000167037.19	transcript	ENST00000400358.9	protein_coding	3/24		INFO_REALIGN_3_PRIME	chr22	TogoVar
SGSM1_chr22_24801211_24932578	24858635	C C	CAAAAAAA others(4): Show CAAAAAAAAAAA	intron_variant intron_variant	MODIFIER	HG06807.hp1 HG06807.hp1	a0001 a0001	a0001c0007 a0001c0007	a0001c0007t0015 a0001c0007t0015	a0001c0007t0015g0074 a0001c0007t0015g0074	1	338	0.0030	11	c.802 others(28): Show c.802-1070_802-1060dupAAAAAAAAAAA	SGSM1	ENSG00000167037.19	transcript	ENST00000400358.9	protein_coding	8/24		INFO_REALIGN_3_PRIME	chr22	TogoVar
SGSM1_chr22_24801211_24932578	24860914	A A	ATATATAT others(4): Show ATATATATATAT	intron_variant intron_variant	MODIFIER	HG02683.hp2 HG02683.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0008 a0001c0001t0008	a0001c0001t0008g0146 a0001c0001t0008g0146	1	338	0.0030	11	c.926 others(28): Show c.926+1074_926+1075insTATATATATAT	SGSM1	ENSG00000167037.19	transcript	ENST00000400358.9	protein_coding	9/24			chr22	TogoVar
SGSM1_chr22_24801211_24932578	24860916	A A	ATATATAT others(4): Show ATATATATATAT	intron_variant intron_variant	MODIFIER	HG00423.hp2 HG03579.hp2 NA18953.hp1 HG00423.hp2 HG03579.hp2 NA18953.hp1	a0001 a0002 a0003 a0001 a0002 a0003	a0001c0001 a0002c0002 a0003c0003 a0001c0001 a0002c0002 a0003c0003	a0001c0001t0036 a0002c0002t0014 a0003c0003t0001 a0001c0001t0036 a0002c0002t0014 a0003c0003t0001	a0001c0001t0036g0334 a0002c0002t0014g0186 a0003c0003t0001g0306 a0001c0001t0036g0334 a0002c0002t0014g0186 a0003c0003t0001g0306	3	338	0.0089	11	c.926 others(28): Show c.926+1076_926+1077insTATATATATAT	SGSM1	ENSG00000167037.19	transcript	ENST00000400358.9	protein_coding	9/24			chr22	TogoVar
SGSM1_chr22_24801211_24932578	24860918	A A	ATATATAT others(4): Show ATATATATATAT	intron_variant intron_variant	MODIFIER	NA19011.hp2 NA19011.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0004 a0001c0001t0004	a0001c0001t0004g0185 a0001c0001t0004g0185	1	338	0.0030	11	c.926 others(28): Show c.926+1078_926+1079insTATATATATAT	SGSM1	ENSG00000167037.19	transcript	ENST00000400358.9	protein_coding	9/24			chr22	TogoVar
SGTA_chr19_2749715_2788273	2777092	T T	TCTCTACT others(4): Show TCTCTACTAAAA	intron_variant intron_variant	MODIFIER	HG02109.hp1 HG02615.hp2 HG02723.hp2 others(4): Show HG02109.hp1 HG02615.hp2 HG02723.hp2 HG02895.hp1 HG02897.hp2 HG03225.hp1 HG03516.hp2	a0001 a0001	a0001c0003 a0001c0003	a0001c0003t0001 a0001c0003t0012 a0001c0003t0013 a0001c0003t0001 a0001c0003t0012 a0001c0003t0013	a0001c0003t0001g0340 a0001c0003t0001g0341 a0001c0003t0001g0342 others(4): Show a0001c0003t0001g0340 a0001c0003t0001g0341 a0001c0003t0001g0342 a0001c0003t0012g0343 a0001c0003t0012g0344 a0001c0003t0013g0339 a0001c0003t0013g0345	7	396	0.0177	11	c.-24 others(28): Show c.-24+6140_-24+6141insTTTTAGTAGAG	SGTA	ENSG00000104969.11	transcript	ENST00000221566.7	protein_coding	1/11			chr19	TogoVar
SGTA_chr19_2749715_2788273	2786765	A A	ATTTTTTT others(4): Show ATTTTTTTTTTT	upstream_gene_variant upstream_gene_variant	MODIFIER	HG01891.hp2 HG02572.hp1 HG02723.hp1 others(8): Show HG01891.hp2 HG02572.hp1 HG02723.hp1 HG02818.hp1 HG02886.hp1 HG02965.hp1 HG03195.hp1 HG03471.hp1 HG03471.hp2 HG03486.hp1 HG06807.hp1	a0001 a0001	a0001c0001 a0001c0005 a0001c0007 others(1): Show a0001c0001 a0001c0005 a0001c0007 a0001c0013	a0001c0001t0001 a0001c0005t0002 a0001c0007t0003 others(3): Show a0001c0001t0001 a0001c0005t0002 a0001c0007t0003 a0001c0007t0004 a0001c0007t0014 a0001c0013t0002	a0001c0001t0001g0191 a0001c0005t0002g0034 a0001c0005t0002g0068 others(8): Show a0001c0001t0001g0191 a0001c0005t0002g0034 a0001c0005t0002g0068 a0001c0005t0002g0070 a0001c0005t0002g0189 a0001c0005t0002g0337 a0001c0005t0002g0338 a0001c0007t0003g0174 a0001c0007t0004g0173 a0001c0007t0014g0178 a0001c0013t0002g0066	11	396	0.0278	11	c.-35 others(22): Show c.-3567_-3557dupAAAAAAAAAAA	SGTA	ENSG00000104969.11	transcript	ENST00000221566.7	protein_coding		3493		chr19	TogoVar
SGTB_chr5_65660928_65727109	65723814	C C	CAAAAAAA others(4): Show CAAAAAAAAAAA	upstream_gene_variant upstream_gene_variant	MODIFIER	HG01515.hp1 HG01981.hp2 HG02055.hp1 others(13): Show HG01515.hp1 HG01981.hp2 HG02055.hp1 HG02615.hp1 HG02886.hp1 HG02886.hp2 HG02970.hp1 HG03490.hp1 HG03516.hp1 HG03579.hp1 HG03688.hp1 NA18948.hp2 NA18972.hp2 NA18980.hp2 NA19062.hp1 NA20752.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0003 a0001c0001t0004 others(2): Show a0001c0001t0001 a0001c0001t0003 a0001c0001t0004 a0001c0001t0008 a0001c0001t0034	a0001c0001t0001g0080 a0001c0001t0003g0012 a0001c0001t0003g0039 others(12): Show a0001c0001t0001g0080 a0001c0001t0003g0012 a0001c0001t0003g0039 a0001c0001t0003g0041 a0001c0001t0003g0044 a0001c0001t0003g0050 a0001c0001t0003g0061 a0001c0001t0003g0063 a0001c0001t0003g0070 a0001c0001t0003g0071 a0001c0001t0003g0084 a0001c0001t0004g0011 a0001c0001t0004g0056 a0001c0001t0008g0046 a0001c0001t0034g0055	16	360	0.0444	11	c.-19 others(22): Show c.-1931_-1921dupTTTTTTTTTTT	SGTB	ENSG00000197860.10	transcript	ENST00000381007.9	protein_coding		1706		chr5	TogoVar
SH2B2_chr7_102281868_102326711	102286765	A A	AGGGGGCG others(4): Show AGGGGGCGGGAG	upstream_gene_variant upstream_gene_variant	MODIFIER	HG02738.hp1 HG02738.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0002 a0001c0001t0002	a0001c0001t0002g0023 a0001c0001t0002g0023	1	406	0.0025	11	c.-35 others(20): Show c.-359_-358insGGGGGCGGGAG	SH2B2	ENSG00000160999.11	transcript	ENST00000444095.3	protein_coding		102		chr7	TogoVar
SH2B2_chr7_102281868_102326711	102299197	C C	CTTTTTTT others(4): Show CTTTTTTTTTTT	intron_variant intron_variant	MODIFIER	HG02717.hp2 HG02717.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0002 a0001c0001t0002	a0001c0001t0002g0098 a0001c0001t0002g0098	1	406	0.0025	11	c.-29 others(28): Show c.-29-1316_-29-1306dupTTTTTTTTTTT	SH2B2	ENSG00000160999.11	transcript	ENST00000444095.3	protein_coding	1/8		INFO_REALIGN_3_PRIME	chr7	TogoVar
SH2B3_chr12_111400923_111456623	111401853	A A	AGTCGCTG others(4): Show AGTCGCTGCTCC	upstream_gene_variant upstream_gene_variant	MODIFIER	NA18993.hp2 NA18993.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0003 a0001c0001t0003	a0001c0001t0003g0047 a0001c0001t0003g0047	1	326	0.0031	11	c.-44 others(22): Show c.-4452_-4451insGTCGCTGCTCC	SH2B3	ENSG00000111252.11	transcript	ENST00000341259.7	protein_coding		4069		chr12	TogoVar
SH2D1B_chr1_162390268_162417136	162403488	G G	GAAAAAAA others(4): Show GAAAAAAAAAAA	intron_variant intron_variant	MODIFIER	HG00323.hp1 HG00438.hp2 HG02071.hp1 others(5): Show HG00323.hp1 HG00438.hp2 HG02071.hp1 NA19000.hp2 NA19030.hp1 NA19082.hp2 NA20129.hp1 NA20752.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0003 a0001c0001t0005 a0001c0001t0003 a0001c0001t0005	a0001c0001t0003g0027 a0001c0001t0003g0054 a0001c0001t0003g0059 others(4): Show a0001c0001t0003g0027 a0001c0001t0003g0054 a0001c0001t0003g0059 a0001c0001t0003g0069 a0001c0001t0003g0082 a0001c0001t0003g0083 a0001c0001t0005g0181	8	424	0.0189	11	c.135 others(26): Show c.135-697_135-687dupTTTTTTTTTTT	SH2D1B	ENSG00000198574.6	transcript	ENST00000367929.3	protein_coding	1/3			chr1	TogoVar
SH2D4B_chr10_80532902_80651560	80549203	T T	TGTGTGTG others(4): Show TGTGTGTGTGTG	intron_variant intron_variant	MODIFIER	HG02056.hp1 HG02056.hp1	a0002 a0002	a0002c0002 a0002c0002	a0002c0002t0002 a0002c0002t0002	a0002c0002t0002g0107 a0002c0002t0002g0107	1	322	0.0031	11	c.184 others(30): Show c.184+10688_184+10689insGTGTGTGTGTG	SH2D4B	ENSG00000178217.15	transcript	ENST00000646907.2	protein_coding	1/7			chr10	TogoVar
SH2D4B_chr10_80532902_80651560	80566090	C C	CAAAAAAA others(4): Show CAAAAAAAAAAA	intron_variant intron_variant	MODIFIER	HG01433.hp2 HG01433.hp2	a0015 a0015	a0015c0022 a0015c0022	a0015c0022t0017 a0015c0022t0017	a0015c0022t0017g0282 a0015c0022t0017g0282	1	322	0.0031	11	c.185 others(28): Show c.185-4046_185-4036dupAAAAAAAAAAA	SH2D4B	ENSG00000178217.15	transcript	ENST00000646907.2	protein_coding	1/7		INFO_REALIGN_3_PRIME	chr10	TogoVar
SH2D4B_chr10_80532902_80651560	80572986	A A	ATATATAT others(4): Show ATATATATATAT	intron_variant intron_variant	MODIFIER	HG02523.hp2 NA19068.hp2 NA19076.hp1 HG02523.hp2 NA19068.hp2 NA19076.hp1	a0001 a0002 a0004 a0001 a0002 a0004	a0001c0014 a0002c0002 a0004c0004 a0001c0014 a0002c0002 a0004c0004	a0001c0014t0002 a0002c0002t0002 a0004c0004t0001 a0001c0014t0002 a0002c0002t0002 a0004c0004t0001	a0001c0014t0002g0045 a0002c0002t0002g0042 a0004c0004t0001g0271 a0001c0014t0002g0045 a0002c0002t0002g0042 a0004c0004t0001g0271	3	322	0.0093	11	c.495 others(28): Show c.495+1409_495+1410insATATATATATT	SH2D4B	ENSG00000178217.15	transcript	ENST00000646907.2	protein_coding	3/7		INFO_REALIGN_3_PRIME	chr10	TogoVar
SH2D4B_chr10_80532902_80651560	80612198	T T	TTTTTTTT others(4): Show TTTTTTTTTTTC	intron_variant intron_variant	MODIFIER	HG03209.hp1 HG03209.hp1	a0017 a0017	a0017c0026 a0017c0026	a0017c0026t0006 a0017c0026t0006	a0017c0026t0006g0203 a0017c0026t0006g0203	1	322	0.0031	11	c.988 others(28): Show c.988+2647_988+2648insTTTTTTTTTTC	SH2D4B	ENSG00000178217.15	transcript	ENST00000646907.2	protein_coding	6/7			chr10	TogoVar
SH2D5_chr1_20714731_20737703	20717061	C C	CTCATGCG others(4): Show CTCATGCGTGCA	downstream_gene_variant downstream_gene_variant	MODIFIER	NA19063.hp2 NA19063.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0002 a0001c0001t0002	a0001c0001t0002g0004 a0001c0001t0002g0004	1	410	0.0024	11	c.47 others(22): Show c.4730_*4731insTGCACGCATGA	SH2D5	ENSG00000189410.12	transcript	ENST00000444387.7	protein_coding		2669		chr1	TogoVar
SH2D7_chr15_78087561_78109362	78089520	T T	TTTTTTGT others(4): Show TTTTTTGTTTTG	upstream_gene_variant upstream_gene_variant	MODIFIER	NA18966.hp2 NA18978.hp2 NA18986.hp2 NA18966.hp2 NA18978.hp2 NA18986.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0002 a0001c0001t0002	a0001c0001t0002g0090 a0001c0001t0002g0091 a0001c0001t0002g0092 a0001c0001t0002g0090 a0001c0001t0002g0091 a0001c0001t0002g0092	3	432	0.0069	11	c.-30 others(22): Show c.-3065_-3064insTTTTTGTTTTG	SH2D7	ENSG00000183476.13	transcript	ENST00000328828.6	protein_coding		3040		chr15	TogoVar
SH3BGRL_chrX_81197102_81303547	81238826	G G	GAGAGAGA others(4): Show GAGAGAGAGAGA	intron_variant intron_variant	MODIFIER	HG01192.hp1 HG01192.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0002 a0001c0001t0002	a0001c0001t0002g0170 a0001c0001t0002g0170	1	243	0.0041	11	c.45+ others(28): Show c.45+36581_45+36582insAGAGAGAGAGA	SH3BGRL	ENSG00000131171.13	transcript	ENST00000373212.6	protein_coding	1/3			chrX	TogoVar
SH3BP5_chr3_15249353_15337586	15296694	C C	CTTTTTTT others(4): Show CTTTTTTTTTTT	intron_variant intron_variant	MODIFIER	HG02257.hp2 HG02486.hp1 HG03195.hp1 HG02257.hp2 HG02486.hp1 HG03195.hp1	a0001 a0001	a0001c0001 a0001c0002 a0001c0001 a0001c0002	a0001c0001t0006 a0001c0002t0001 a0001c0002t0011 a0001c0001t0006 a0001c0002t0001 a0001c0002t0011	a0001c0001t0006g0188 a0001c0002t0001g0267 a0001c0002t0011g0329 a0001c0001t0006g0188 a0001c0002t0001g0267 a0001c0002t0011g0329	3	376	0.0080	11	c.330 others(28): Show c.330+7398_330+7408dupAAAAAAAAAAA	SH3BP5	ENSG00000131370.16	transcript	ENST00000383791.8	protein_coding	3/8			chr3	TogoVar

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