Joint Open Genome and Omics Platform (JoGo)

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Snpeff annotation impact detail

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regionname	pos	ref	alt	annotation	impact	samples	ahapids	chapids	thapids	thapids	ac	an	af	len	hgvs_c	genename	geneid	featuretype	featureid	transcript_biotype	rank	distance	status	chr	external
SUZ12_chr17_31932007_32006038	31957895	C C	CTTTTTTT others(7): Show CTTTTTTTTTTTTTT	intron_variant intron_variant	MODIFIER	HG00280.hp1 HG00323.hp2 HG01099.hp1 others(1): Show HG00280.hp1 HG00323.hp2 HG01099.hp1 HG03704.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0002 a0001c0001t0021 a0001c0001t0002 a0001c0001t0021	a0001c0001t0002g0265 a0001c0001t0002g0266 a0001c0001t0002g0269 others(1): Show a0001c0001t0002g0265 a0001c0001t0002g0266 a0001c0001t0002g0269 a0001c0001t0021g0262	4	280	0.0143	14	c.456 others(31): Show c.456-8240_456-8227dupTTTTTTTTTTTTTT	SUZ12	ENSG00000178691.11	transcript	ENST00000322652.10	protein_coding	4/15		INFO_REALIGN_3_PRIME	chr17	TogoVar
SUZ12_chr17_31932007_32006038	31980429	C C	CTTTTTTT others(7): Show CTTTTTTTTTTTTTT	intron_variant intron_variant	MODIFIER	HG02738.hp1 HG02738.hp1	a0002 a0002	a0002c0005 a0002c0005	a0002c0005t0001 a0002c0005t0001	a0002c0005t0001g0244 a0002c0005t0001g0244	1	280	0.0036	14	c.918 others(31): Show c.918-2546_918-2533dupTTTTTTTTTTTTTT	SUZ12	ENSG00000178691.11	transcript	ENST00000322652.10	protein_coding	8/15		INFO_REALIGN_3_PRIME	chr17	TogoVar
SV2B_chr15_91095257_91307565	91099087	C C	CAAAAAAA others(7): Show CAAAAAAAAAAAAAA	upstream_gene_variant upstream_gene_variant	MODIFIER	HG02895.hp2 HG02895.hp2	a0001 a0001	a0001c0003 a0001c0003	a0001c0003t0040 a0001c0003t0040	a0001c0003t0040g0212 a0001c0003t0040g0212	1	214	0.0047	14	c.-16 others(25): Show c.-1668_-1667insAAAAAAAAAAAAAA	SV2B	ENSG00000185518.12	transcript	ENST00000394232.6	protein_coding		1169		chr15	TogoVar
SV2B_chr15_91095257_91307565	91100171	G G	GGCGCGCT others(7): Show GGCGCGCTGCGCGCT	upstream_gene_variant upstream_gene_variant	MODIFIER	HG01891.hp2 HG01891.hp2	a0001 a0001	a0001c0004 a0001c0004	a0001c0004t0027 a0001c0004t0027	a0001c0004t0027g0148 a0001c0004t0027g0148	1	214	0.0047	14	c.-58 others(23): Show c.-584_-583insGCGCGCTGCGCGCT	SV2B	ENSG00000185518.12	transcript	ENST00000394232.6	protein_coding		85		chr15	TogoVar
SV2B_chr15_91095257_91307565	91125781	C C	CAAAAAAA others(7): Show CAAAAAAAAAAAAAA	intron_variant intron_variant	MODIFIER	HG03209.hp2 HG03209.hp2	a0001 a0001	a0001c0002 a0001c0002	a0001c0002t0041 a0001c0002t0041	a0001c0002t0041g0013 a0001c0002t0041g0013	1	214	0.0047	14	c.-39 others(35): Show c.-392+25424_-392+25437dupAAAAAAAAAAAAAA	SV2B	ENSG00000185518.12	transcript	ENST00000394232.6	protein_coding	1/12		INFO_REALIGN_3_PRIME	chr15	TogoVar
SV2B_chr15_91095257_91307565	91134004	C C	CTTTTTTT others(7): Show CTTTTTTTTTTTTTT	intron_variant intron_variant	MODIFIER	HG02258.hp2 HG02559.hp2 HG02630.hp1 others(13): Show HG02258.hp2 HG02559.hp2 HG02630.hp1 HG02896.hp2 HG03225.hp1 HG03516.hp2 HG03540.hp1 HG03540.hp2 HG03710.hp1 HG04115.hp1 NA18522.hp1 NA18522.hp2 NA19030.hp2 NA20300.hp1 NA20905.hp2 NA21309.hp2	a0001 a0001	a0001c0001 a0001c0002 a0001c0003 others(5): Show a0001c0001 a0001c0002 a0001c0003 a0001c0004 a0001c0006 a0001c0007 a0001c0009 a0001c0010	a0001c0001t0001 a0001c0001t0003 a0001c0002t0042 others(11): Show a0001c0001t0001 a0001c0001t0003 a0001c0002t0042 a0001c0003t0022 a0001c0003t0039 a0001c0004t0051 a0001c0006t0004 a0001c0006t0006 a0001c0006t0032 a0001c0006t0036 a0001c0007t0002 a0001c0009t0025 a0001c0009t0033 a0001c0010t0073	a0001c0001t0001g0178 a0001c0001t0003g0161 a0001c0002t0042g0135 others(13): Show a0001c0001t0001g0178 a0001c0001t0003g0161 a0001c0002t0042g0135 a0001c0003t0022g0004 a0001c0003t0039g0162 a0001c0004t0051g0005 a0001c0006t0004g0017 a0001c0006t0006g0127 a0001c0006t0006g0201 a0001c0006t0032g0145 a0001c0006t0036g0211 a0001c0007t0002g0187 a0001c0009t0025g0014 a0001c0009t0025g0209 a0001c0009t0033g0069 a0001c0010t0073g0204	16	214	0.0748	14	c.-39 others(35): Show c.-392+33653_-392+33654insTTTTTTTTTTTTTT	SV2B	ENSG00000185518.12	transcript	ENST00000394232.6	protein_coding	1/12		INFO_REALIGN_3_PRIME	chr15	TogoVar
SV2B_chr15_91095257_91307565	91168301	C C	CGAGAGAG others(7): Show CGAGAGAGAGAGAGA	intron_variant intron_variant	MODIFIER	HG00140.hp2 HG01123.hp2 HG01175.hp1 others(7): Show HG00140.hp2 HG01123.hp2 HG01175.hp1 HG01192.hp1 HG02155.hp2 HG02280.hp2 HG03017.hp2 HG03041.hp1 HG06807.hp1 NA19056.hp2	a0001 a0005 a0001 a0005	a0001c0001 a0001c0002 a0001c0012 others(2): Show a0001c0001 a0001c0002 a0001c0012 a0001c0024 a0005c0027	a0001c0001t0003 a0001c0001t0005 a0001c0001t0065 others(4): Show a0001c0001t0003 a0001c0001t0005 a0001c0001t0065 a0001c0002t0009 a0001c0012t0005 a0001c0024t0019 a0005c0027t0007	a0001c0001t0003g0045 a0001c0001t0003g0173 a0001c0001t0005g0041 others(7): Show a0001c0001t0003g0045 a0001c0001t0003g0173 a0001c0001t0005g0041 a0001c0001t0065g0052 a0001c0002t0009g0085 a0001c0002t0009g0102 a0001c0002t0009g0103 a0001c0012t0005g0149 a0001c0024t0019g0199 a0005c0027t0007g0125	10	214	0.0467	14	c.-39 others(35): Show c.-391-57555_-391-57542dupGAGAGAGAGAGAGA	SV2B	ENSG00000185518.12	transcript	ENST00000394232.6	protein_coding	1/12		INFO_REALIGN_3_PRIME	chr15	TogoVar
SV2B_chr15_91095257_91307565	91191071	T T	TTTTTTTT others(7): Show TTTTTTTTTTTTTTC	intron_variant intron_variant	MODIFIER	HG02897.hp1 HG02897.hp1	a0001 a0001	a0001c0003 a0001c0003	a0001c0003t0004 a0001c0003t0004	a0001c0003t0004g0074 a0001c0003t0004g0074	1	214	0.0047	14	c.-39 others(35): Show c.-391-34789_-391-34788insCTTTTTTTTTTTTT	SV2B	ENSG00000185518.12	transcript	ENST00000394232.6	protein_coding	1/12		INFO_REALIGN_3_PRIME	chr15	TogoVar
SV2B_chr15_91095257_91307565	91221690	T T	TGTGCACG others(7): Show TGTGCACGCGCGCGC	intron_variant intron_variant	MODIFIER	HG02055.hp2 HG02615.hp2 HG02622.hp2 HG02055.hp2 HG02615.hp2 HG02622.hp2	a0001 a0001	a0001c0009 a0001c0016 a0001c0025 a0001c0009 a0001c0016 a0001c0025	a0001c0009t0035 a0001c0016t0005 a0001c0025t0006 a0001c0009t0035 a0001c0016t0005 a0001c0025t0006	a0001c0009t0035g0146 a0001c0016t0005g0140 a0001c0025t0006g0159 a0001c0009t0035g0146 a0001c0016t0005g0140 a0001c0025t0006g0159	3	214	0.0140	14	c.-39 others(33): Show c.-391-4182_-391-4181insTGCACGCGCGCGCG	SV2B	ENSG00000185518.12	transcript	ENST00000394232.6	protein_coding	1/12		INFO_REALIGN_3_PRIME	chr15	TogoVar
SV2B_chr15_91095257_91307565	91221691	G G	GTGCACGC others(7): Show GTGCACGCGCGCGCA	intron_variant intron_variant	MODIFIER	HG01884.hp2 HG02145.hp2 HG02622.hp1 others(4): Show HG01884.hp2 HG02145.hp2 HG02622.hp1 HG03130.hp2 HG03225.hp2 HG03486.hp2 NA18906.hp2	a0001 a0001	a0001c0002 a0001c0005 a0001c0010 a0001c0002 a0001c0005 a0001c0010	a0001c0002t0011 a0001c0005t0008 a0001c0010t0002 a0001c0002t0011 a0001c0005t0008 a0001c0010t0002	a0001c0002t0011g0021 a0001c0005t0008g0006 a0001c0005t0008g0009 others(4): Show a0001c0002t0011g0021 a0001c0005t0008g0006 a0001c0005t0008g0009 a0001c0005t0008g0048 a0001c0005t0008g0126 a0001c0005t0008g0189 a0001c0010t0002g0008	7	214	0.0327	14	c.-39 others(33): Show c.-391-4182_-391-4181insTGCACGCGCGCGCA	SV2B	ENSG00000185518.12	transcript	ENST00000394232.6	protein_coding	1/12			chr15	TogoVar
SV2B_chr15_91095257_91307565	91249068	T T	TCACACAC others(7): Show TCACACACACACACA	intron_variant intron_variant	MODIFIER	HG02615.hp1 HG02615.hp1	a0001 a0001	a0001c0006 a0001c0006	a0001c0006t0004 a0001c0006t0004	a0001c0006t0004g0019 a0001c0006t0004g0019	1	214	0.0047	14	c.452 others(31): Show c.452-2724_452-2711dupCACACACACACACA	SV2B	ENSG00000185518.12	transcript	ENST00000394232.6	protein_coding	2/12		INFO_REALIGN_3_PRIME	chr15	TogoVar
SV2B_chr15_91095257_91307565	91249068	T T	TCACATAC others(7): Show TCACATACACACACA	intron_variant intron_variant	MODIFIER	HG02109.hp2 HG02970.hp1 HG02109.hp2 HG02970.hp1	a0001 a0001	a0001c0002 a0001c0009 a0001c0002 a0001c0009	a0001c0002t0071 a0001c0009t0013 a0001c0002t0071 a0001c0009t0013	a0001c0002t0071g0063 a0001c0009t0013g0155 a0001c0002t0071g0063 a0001c0009t0013g0155	2	214	0.0094	14	c.452 others(31): Show c.452-2747_452-2746insTACACACACACACA	SV2B	ENSG00000185518.12	transcript	ENST00000394232.6	protein_coding	2/12		INFO_REALIGN_3_PRIME	chr15	TogoVar
SV2C_chr5_76078383_76338956	76085826	T T	TACACACA others(7): Show TACACACACACACAC	intron_variant intron_variant	MODIFIER	HG02257.hp2 HG02300.hp2 HG02602.hp1 others(6): Show HG02257.hp2 HG02300.hp2 HG02602.hp1 HG02630.hp2 HG03834.hp1 HG04184.hp1 NA18968.hp1 NA18992.hp1 NA19068.hp1	a0001 a0001	a0001c0001 a0001c0002 a0001c0001 a0001c0002	a0001c0001t0001 a0001c0001t0009 a0001c0001t0011 others(3): Show a0001c0001t0001 a0001c0001t0009 a0001c0001t0011 a0001c0001t0052 a0001c0001t0125 a0001c0002t0096	a0001c0001t0001g0054 a0001c0001t0001g0057 a0001c0001t0001g0058 others(6): Show a0001c0001t0001g0054 a0001c0001t0001g0057 a0001c0001t0001g0058 a0001c0001t0001g0059 a0001c0001t0009g0008 a0001c0001t0011g0056 a0001c0001t0052g0055 a0001c0001t0125g0007 a0001c0002t0096g0112	9	234	0.0385	14	c.-10 others(33): Show c.-102+2334_-102+2347dupCACACACACACACA	SV2C	ENSG00000122012.14	transcript	ENST00000502798.7	protein_coding	1/12		INFO_REALIGN_3_PRIME	chr5	TogoVar
SV2C_chr5_76078383_76338956	76164721	A A	AGTGTGTG others(7): Show AGTGTGTGTGTGTGT	intron_variant intron_variant	MODIFIER	HG00423.hp1 HG01074.hp2 HG01261.hp1 others(24): Show HG00423.hp1 HG01074.hp2 HG01261.hp1 HG01361.hp2 HG01433.hp1 HG01884.hp2 HG02056.hp1 HG02083.hp2 HG02486.hp2 HG02572.hp1 HG02572.hp2 HG02602.hp2 HG02647.hp2 HG02809.hp2 HG02818.hp1 HG03540.hp1 HG03834.hp1 HG03834.hp2 NA18945.hp1 NA18960.hp1 NA18975.hp2 NA18981.hp2 NA19001.hp1 NA19068.hp2 NA19079.hp2 NA19081.hp1 NA20905.hp2	a0001 a0002 a0003 others(1): Show a0001 a0002 a0003 a0007	a0001c0001 a0001c0002 a0001c0009 others(4): Show a0001c0001 a0001c0002 a0001c0009 a0002c0003 a0003c0004 a0003c0005 a0007c0015	a0001c0001t0003 a0001c0001t0007 a0001c0001t0008 others(24): Show a0001c0001t0003 a0001c0001t0007 a0001c0001t0008 a0001c0001t0009 a0001c0001t0018 a0001c0001t0023 a0001c0001t0031 a0001c0001t0041 a0001c0001t0074 a0001c0001t0075 a0001c0001t0082 a0001c0001t0084 a0001c0001t0132 a0001c0001t0136 a0001c0001t0157 a0001c0002t0006 a0001c0002t0096 a0001c0002t0097 a0001c0002t0108 a0001c0009t0031 a0002c0003t0049 a0002c0003t0072 a0002c0003t0124 a0003c0004t0005 a0003c0004t0026 a0003c0005t0155 a0007c0015t0005	a0001c0001t0003g0167 a0001c0001t0007g0122 a0001c0001t0008g0127 others(24): Show a0001c0001t0003g0167 a0001c0001t0007g0122 a0001c0001t0008g0127 a0001c0001t0009g0190 a0001c0001t0018g0067 a0001c0001t0023g0131 a0001c0001t0031g0179 a0001c0001t0041g0036 a0001c0001t0074g0208 a0001c0001t0075g0115 a0001c0001t0082g0220 a0001c0001t0084g0090 a0001c0001t0132g0009 a0001c0001t0136g0095 a0001c0001t0157g0029 a0001c0002t0006g0174 a0001c0002t0096g0112 a0001c0002t0097g0114 a0001c0002t0108g0120 a0001c0009t0031g0184 a0002c0003t0049g0025 a0002c0003t0072g0143 a0002c0003t0124g0183 a0003c0004t0005g0161 a0003c0004t0026g0147 a0003c0005t0155g0149 a0007c0015t0005g0180	27	234	0.1154	14	c.581 others(33): Show c.581-30181_581-30168dupGTGTGTGTGTGTGT	SV2C	ENSG00000122012.14	transcript	ENST00000502798.7	protein_coding	2/12		INFO_REALIGN_3_PRIME	chr5	TogoVar
SV2C_chr5_76078383_76338956	76245926	G G	GTGTGTGT others(7): Show GTGTGTGTATGTGTA	intron_variant intron_variant	MODIFIER	HG02809.hp1 NA19030.hp1 HG02809.hp1 NA19030.hp1	a0001 a0001	a0001c0001 a0001c0002 a0001c0001 a0001c0002	a0001c0001t0135 a0001c0002t0025 a0001c0001t0135 a0001c0002t0025	a0001c0001t0135g0198 a0001c0002t0025g0232 a0001c0001t0135g0198 a0001c0002t0025g0232	2	234	0.0086	14	c.913 others(33): Show c.913+36046_913+36047insATGTGTATGTGTGT	SV2C	ENSG00000122012.14	transcript	ENST00000502798.7	protein_coding	4/12		INFO_REALIGN_3_PRIME	chr5	TogoVar
SV2C_chr5_76078383_76338956	76245936	A A	ATGTGTAT others(7): Show ATGTGTATGTGTGTG	intron_variant intron_variant	MODIFIER	HG02976.hp2 HG02976.hp2	a0002 a0002	a0002c0003 a0002c0003	a0002c0003t0017 a0002c0003t0017	a0002c0003t0017g0030 a0002c0003t0017g0030	1	234	0.0043	14	c.913 others(33): Show c.913+36054_913+36055insATGTGTGTGTGTGT	SV2C	ENSG00000122012.14	transcript	ENST00000502798.7	protein_coding	4/12		INFO_REALIGN_3_PRIME	chr5	TogoVar
SV2C_chr5_76078383_76338956	76273146	G G	GATATATA others(7): Show GATATATATATATAT	intron_variant intron_variant	MODIFIER	HG02647.hp2 HG02976.hp2 HG02647.hp2 HG02976.hp2	a0002 a0002	a0002c0003 a0002c0003	a0002c0003t0017 a0002c0003t0049 a0002c0003t0017 a0002c0003t0049	a0002c0003t0017g0030 a0002c0003t0049g0025 a0002c0003t0017g0030 a0002c0003t0049g0025	2	234	0.0086	14	c.914 others(33): Show c.914-12004_914-11991dupTATATATATATATA	SV2C	ENSG00000122012.14	transcript	ENST00000502798.7	protein_coding	4/12		INFO_REALIGN_3_PRIME	chr5	TogoVar
SVBP_chr1_42802052_42822397	42808141	G G	GTATATAT others(7): Show GTATATATATATATA	intron_variant intron_variant	MODIFIER	NA18971.hp2 NA18971.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0002 a0001c0001t0002	a0001c0001t0002g0093 a0001c0001t0002g0093	1	394	0.0025	14	c.115 others(29): Show c.115-642_115-641insTATATATATATATA	SVBP	ENSG00000177868.12	transcript	ENST00000372521.9	protein_coding	2/2			chr1	TogoVar
SVBP_chr1_42802052_42822397	42819170	C C	CGTGTGTG others(7): Show CGTGTGTGTGTGTGT	upstream_gene_variant upstream_gene_variant	MODIFIER	NA19010.hp1 NA19010.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0003 a0001c0001t0003	a0001c0001t0003g0008 a0001c0001t0003g0008	1	394	0.0025	14	c.-20 others(25): Show c.-2031_-2018dupACACACACACACAC	SVBP	ENSG00000177868.12	transcript	ENST00000372521.9	protein_coding		1774		chr1	TogoVar
SVEP1_chr9_110360248_110584741	110385680	T T	TTCAGTGA others(7): Show TTCAGTGAATCCTAG	intron_variant intron_variant	MODIFIER	HG00099.hp2 HG01069.hp2 HG01071.hp2 others(17): Show HG00099.hp2 HG01069.hp2 HG01071.hp2 HG01109.hp1 HG01884.hp1 HG02055.hp1 HG02148.hp1 HG02280.hp2 HG02615.hp1 HG02647.hp1 HG02717.hp1 HG02886.hp2 HG02895.hp1 HG03041.hp1 HG03139.hp1 HG03490.hp1 HG03492.hp2 HG03669.hp2 NA19030.hp2 NA19043.hp1	a0001 a0004 a0005 others(9): Show a0001 a0004 a0005 a0012 a0021 a0023 a0045 a0058 a0088 a0089 a0099 a0110	a0001c0052 a0004c0087 a0005c0090 others(10): Show a0001c0052 a0004c0087 a0005c0090 a0012c0026 a0021c0055 a0023c0036 a0023c0137 a0045c0057 a0058c0122 a0088c0146 a0089c0157 a0099c0069 a0110c0156	a0001c0052t0001 a0004c0087t0001 a0005c0090t0001 others(11): Show a0001c0052t0001 a0004c0087t0001 a0005c0090t0001 a0012c0026t0001 a0021c0055t0001 a0023c0036t0001 a0023c0137t0001 a0045c0057t0001 a0045c0057t0013 a0058c0122t0003 a0088c0146t0001 a0089c0157t0001 a0099c0069t0001 a0110c0156t0003	a0001c0052t0001g0089 a0001c0052t0001g0121 a0004c0087t0001g0087 others(17): Show a0001c0052t0001g0089 a0001c0052t0001g0121 a0004c0087t0001g0087 a0005c0090t0001g0088 a0012c0026t0001g0063 a0012c0026t0001g0100 a0012c0026t0001g0124 a0021c0055t0001g0329 a0021c0055t0001g0330 a0023c0036t0001g0127 a0023c0036t0001g0128 a0023c0036t0001g0180 a0023c0137t0001g0182 a0045c0057t0001g0205 a0045c0057t0013g0129 a0058c0122t0003g0201 a0088c0146t0001g0315 a0089c0157t0001g0360 a0099c0069t0001g0291 a0110c0156t0003g0361	20	362	0.0553	14	c.102 others(33): Show c.10237+217_10237+218insCTAGGATTCACTGA	SVEP1	ENSG00000165124.19	transcript	ENST00000374469.6	protein_coding	43/47			chr9	TogoVar
SVEP1_chr9_110360248_110584741	110392133	T T	TTATATAT others(7): Show TTATATATATATATA	intron_variant intron_variant	MODIFIER	HG00099.hp2 HG01069.hp2 HG01071.hp2 others(7): Show HG00099.hp2 HG01069.hp2 HG01071.hp2 HG01109.hp1 HG02148.hp1 HG02647.hp1 HG02717.hp1 HG02886.hp2 HG02895.hp1 NA19043.hp1	a0012 a0023 a0058 others(2): Show a0012 a0023 a0058 a0088 a0089	a0012c0026 a0023c0036 a0023c0137 others(3): Show a0012c0026 a0023c0036 a0023c0137 a0058c0122 a0088c0146 a0089c0157	a0012c0026t0001 a0023c0036t0001 a0023c0137t0001 others(3): Show a0012c0026t0001 a0023c0036t0001 a0023c0137t0001 a0058c0122t0003 a0088c0146t0001 a0089c0157t0001	a0012c0026t0001g0063 a0012c0026t0001g0100 a0012c0026t0001g0124 others(7): Show a0012c0026t0001g0063 a0012c0026t0001g0100 a0012c0026t0001g0124 a0023c0036t0001g0127 a0023c0036t0001g0128 a0023c0036t0001g0180 a0023c0137t0001g0182 a0058c0122t0003g0201 a0088c0146t0001g0315 a0089c0157t0001g0360	10	362	0.0276	14	c.982 others(33): Show c.9823-2560_9823-2547dupTATATATATATATA	SVEP1	ENSG00000165124.19	transcript	ENST00000374469.6	protein_coding	40/47			chr9	TogoVar
SVEP1_chr9_110360248_110584741	110403296	G G	GTTTTTTT others(7): Show GTTTTTTTTTTTTTT	intron_variant intron_variant	MODIFIER	HG01243.hp2 HG01255.hp2 HG02027.hp2 others(9): Show HG01243.hp2 HG01255.hp2 HG02027.hp2 HG02074.hp1 HG02074.hp2 HG02083.hp2 HG02258.hp2 HG03831.hp1 NA18906.hp2 NA18950.hp2 NA18968.hp1 NA18972.hp1	a0001 a0002 a0005 others(3): Show a0001 a0002 a0005 a0029 a0034 a0066	a0001c0002 a0001c0060 a0002c0001 others(5): Show a0001c0002 a0001c0060 a0002c0001 a0005c0009 a0005c0093 a0029c0021 a0034c0043 a0066c0132	a0001c0002t0001 a0001c0002t0002 a0001c0060t0010 others(6): Show a0001c0002t0001 a0001c0002t0002 a0001c0060t0010 a0002c0001t0002 a0005c0009t0002 a0005c0093t0001 a0029c0021t0002 a0034c0043t0003 a0066c0132t0003	a0001c0002t0001g0035 a0001c0002t0001g0117 a0001c0002t0002g0267 others(9): Show a0001c0002t0001g0035 a0001c0002t0001g0117 a0001c0002t0002g0267 a0001c0002t0002g0287 a0001c0002t0002g0335 a0001c0060t0010g0003 a0002c0001t0002g0203 a0005c0009t0002g0227 a0005c0093t0001g0173 a0029c0021t0002g0138 a0034c0043t0003g0268 a0066c0132t0003g0327	12	362	0.0332	14	c.966 others(33): Show c.9666+1017_9666+1030dupAAAAAAAAAAAAAA	SVEP1	ENSG00000165124.19	transcript	ENST00000374469.6	protein_coding	39/47			chr9	TogoVar
SVEP1_chr9_110360248_110584741	110428399	A A	AACACACA others(7): Show AACACACACACACAC	intron_variant intron_variant	MODIFIER	HG00323.hp2 HG01433.hp2 HG01496.hp2 others(28): Show HG00323.hp2 HG01433.hp2 HG01496.hp2 HG01515.hp2 HG01978.hp2 HG02004.hp1 HG02040.hp2 HG02129.hp2 HG02135.hp2 HG02273.hp2 HG02738.hp1 HG03017.hp1 HG03490.hp2 HG03669.hp1 HG03834.hp1 HG03927.hp2 HG04199.hp1 NA18612.hp1 NA18939.hp2 NA18946.hp2 NA18962.hp1 NA18962.hp2 NA18982.hp2 NA18987.hp2 NA18989.hp1 NA19002.hp1 NA19009.hp2 NA19060.hp1 NA19065.hp2 NA19068.hp1 NA19068.hp2	a0010 a0018 a0025 others(12): Show a0010 a0018 a0025 a0026 a0027 a0035 a0037 a0046 a0055 a0057 a0074 a0078 a0092 a0096 a0102	a0010c0007 a0010c0039 a0018c0017 others(16): Show a0010c0007 a0010c0039 a0018c0017 a0018c0062 a0025c0024 a0025c0085 a0026c0018 a0027c0028 a0035c0027 a0037c0029 a0046c0065 a0046c0066 a0055c0042 a0057c0037 a0074c0088 a0078c0083 a0092c0151 a0096c0063 a0102c0111	a0010c0007t0001 a0010c0007t0002 a0010c0039t0002 others(17): Show a0010c0007t0001 a0010c0007t0002 a0010c0039t0002 a0018c0017t0001 a0018c0062t0001 a0025c0024t0001 a0025c0085t0002 a0026c0018t0003 a0027c0028t0003 a0035c0027t0003 a0037c0029t0001 a0046c0065t0001 a0046c0066t0001 a0055c0042t0001 a0057c0037t0003 a0074c0088t0003 a0078c0083t0001 a0092c0151t0002 a0096c0063t0012 a0102c0111t0001	a0010c0007t0001g0353 a0010c0007t0002g0216 a0010c0007t0002g0223 others(28): Show a0010c0007t0001g0353 a0010c0007t0002g0216 a0010c0007t0002g0223 a0010c0039t0002g0160 a0010c0039t0002g0319 a0018c0017t0001g0247 a0018c0017t0001g0300 a0018c0062t0001g0263 a0025c0024t0001g0031 a0025c0024t0001g0246 a0025c0024t0001g0355 a0025c0085t0002g0352 a0026c0018t0003g0236 a0026c0018t0003g0238 a0026c0018t0003g0244 a0027c0028t0003g0077 a0027c0028t0003g0184 a0027c0028t0003g0185 a0035c0027t0003g0164 a0035c0027t0003g0186 a0037c0029t0001g0310 a0037c0029t0001g0311 a0046c0065t0001g0140 a0046c0066t0001g0169 a0055c0042t0001g0345 a0057c0037t0003g0336 a0074c0088t0003g0224 a0078c0083t0001g0257 a0092c0151t0002g0285 a0096c0063t0012g0313 a0102c0111t0001g0189	31	362	0.0856	14	c.580 others(31): Show c.5808-655_5808-642dupGTGTGTGTGTGTGT	SVEP1	ENSG00000165124.19	transcript	ENST00000374469.6	protein_coding	35/47			chr9	TogoVar
SVEP1_chr9_110360248_110584741	110434666	T T	TAAAAAAA others(7): Show TAAAAAAAAAAAAAA	intron_variant intron_variant	MODIFIER	HG00438.hp2 HG00609.hp1 HG00621.hp2 others(14): Show HG00438.hp2 HG00609.hp1 HG00621.hp2 HG01099.hp1 HG01346.hp1 HG02300.hp1 NA18747.hp1 NA18946.hp1 NA18948.hp2 NA18957.hp1 NA18970.hp1 NA18975.hp2 NA18992.hp2 NA18999.hp1 NA19002.hp2 NA19081.hp2 NA20129.hp1	a0003 a0009 a0015 others(4): Show a0003 a0009 a0015 a0016 a0028 a0061 a0114	a0003c0004 a0009c0010 a0009c0046 others(5): Show a0003c0004 a0009c0010 a0009c0046 a0015c0012 a0016c0016 a0028c0038 a0061c0152 a0114c0155	a0003c0004t0001 a0009c0010t0001 a0009c0010t0003 others(7): Show a0003c0004t0001 a0009c0010t0001 a0009c0010t0003 a0009c0046t0002 a0015c0012t0002 a0015c0012t0003 a0016c0016t0001 a0028c0038t0002 a0061c0152t0003 a0114c0155t0001	a0003c0004t0001g0023 a0003c0004t0001g0027 a0003c0004t0001g0028 others(14): Show a0003c0004t0001g0023 a0003c0004t0001g0027 a0003c0004t0001g0028 a0003c0004t0001g0032 a0003c0004t0001g0245 a0003c0004t0001g0333 a0009c0010t0001g0284 a0009c0010t0001g0288 a0009c0010t0003g0256 a0009c0046t0002g0295 a0015c0012t0002g0135 a0015c0012t0003g0143 a0015c0012t0003g0150 a0016c0016t0001g0325 a0028c0038t0002g0298 a0061c0152t0003g0356 a0114c0155t0001g0359	17	362	0.0470	14	c.488 others(31): Show c.4889-174_4889-161dupTTTTTTTTTTTTTT	SVEP1	ENSG00000165124.19	transcript	ENST00000374469.6	protein_coding	29/47			chr9	TogoVar
SVEP1_chr9_110360248_110584741	110466760	C C	CAAAAAAA others(7): Show CAAAAAAAAAAAAAA	intron_variant intron_variant	MODIFIER	HG00099.hp1 HG02135.hp2 HG04115.hp1 HG00099.hp1 HG02135.hp2 HG04115.hp1	a0008 a0026 a0056 a0008 a0026 a0056	a0008c0013 a0026c0018 a0056c0145 a0008c0013 a0026c0018 a0056c0145	a0008c0013t0003 a0026c0018t0003 a0056c0145t0001 a0008c0013t0003 a0026c0018t0003 a0056c0145t0001	a0008c0013t0003g0314 a0026c0018t0003g0238 a0056c0145t0001g0337 a0008c0013t0003g0314 a0026c0018t0003g0238 a0056c0145t0001g0337	3	362	0.0083	14	c.316 others(31): Show c.3161-748_3161-735dupTTTTTTTTTTTTTT	SVEP1	ENSG00000165124.19	transcript	ENST00000374469.6	protein_coding	17/47			chr9	TogoVar
SVEP1_chr9_110360248_110584741	110491590	G G	GGGGTGTG others(7): Show GGGGTGTGTGTGTGT	intron_variant intron_variant	MODIFIER	HG02615.hp2 HG02615.hp2	a0081 a0081	a0081c0102 a0081c0102	a0081c0102t0005 a0081c0102t0005	a0081c0102t0005g0073 a0081c0102t0005g0073	1	362	0.0028	14	c.180 others(33): Show c.1801-1812_1801-1811insACACACACACACCC	SVEP1	ENSG00000165124.19	transcript	ENST00000374469.6	protein_coding	8/47			chr9	TogoVar
SVEP1_chr9_110360248_110584741	110491590	G G	GGTGTGTG others(7): Show GGTGTGTGTGTGTGT	intron_variant intron_variant	MODIFIER	HG02965.hp2 HG03579.hp2 HG03669.hp2 others(2): Show HG02965.hp2 HG03579.hp2 HG03669.hp2 NA18906.hp2 NA18998.hp2	a0001 a0012 a0014 others(1): Show a0001 a0012 a0014 a0099	a0001c0060 a0012c0025 a0014c0011 others(1): Show a0001c0060 a0012c0025 a0014c0011 a0099c0069	a0001c0060t0010 a0012c0025t0004 a0012c0025t0016 others(2): Show a0001c0060t0010 a0012c0025t0004 a0012c0025t0016 a0014c0011t0002 a0099c0069t0001	a0001c0060t0010g0003 a0012c0025t0004g0130 a0012c0025t0016g0265 others(2): Show a0001c0060t0010g0003 a0012c0025t0004g0130 a0012c0025t0016g0265 a0014c0011t0002g0242 a0099c0069t0001g0291	5	362	0.0138	14	c.180 others(33): Show c.1801-1825_1801-1812dupACACACACACACAC	SVEP1	ENSG00000165124.19	transcript	ENST00000374469.6	protein_coding	8/47			chr9	TogoVar
SVEP1_chr9_110360248_110584741	110528156	G G	GTATATAT others(7): Show GTATATATATATATA	intron_variant intron_variant	MODIFIER	HG01099.hp2 HG02004.hp2 HG02280.hp2 HG01099.hp2 HG02004.hp2 HG02280.hp2	a0001 a0024 a0001 a0024	a0001c0052 a0001c0123 a0024c0020 a0001c0052 a0001c0123 a0024c0020	a0001c0052t0001 a0001c0123t0002 a0024c0020t0001 a0001c0052t0001 a0001c0123t0002 a0024c0020t0001	a0001c0052t0001g0121 a0001c0123t0002g0260 a0024c0020t0001g0045 a0001c0052t0001g0121 a0001c0123t0002g0260 a0024c0020t0001g0045	3	362	0.0083	14	c.965 others(33): Show c.965-14064_965-14051dupTATATATATATATA	SVEP1	ENSG00000165124.19	transcript	ENST00000374469.6	protein_coding	3/47			chr9	TogoVar
SVEP1_chr9_110360248_110584741	110528156	G G	GTGTATAT others(7): Show GTGTATATATATATA	intron_variant intron_variant	MODIFIER	HG00673.hp1 HG01257.hp2 HG01258.hp2 others(10): Show HG00673.hp1 HG01257.hp2 HG01258.hp2 HG02486.hp2 HG02572.hp1 HG03139.hp1 HG03490.hp1 HG03492.hp2 HG03834.hp2 HG06807.hp1 NA19082.hp2 NA19088.hp2 NA20752.hp2	a0001 a0004 a0005 others(5): Show a0001 a0004 a0005 a0021 a0026 a0032 a0043 a0049	a0001c0002 a0004c0005 a0005c0090 others(6): Show a0001c0002 a0004c0005 a0005c0090 a0021c0055 a0021c0167 a0026c0018 a0032c0054 a0043c0107 a0049c0047	a0001c0002t0002 a0004c0005t0002 a0004c0005t0004 others(7): Show a0001c0002t0002 a0004c0005t0002 a0004c0005t0004 a0005c0090t0001 a0021c0055t0001 a0021c0167t0008 a0026c0018t0003 a0032c0054t0001 a0043c0107t0004 a0049c0047t0003	a0001c0002t0002g0258 a0001c0002t0002g0259 a0004c0005t0002g0037 others(9): Show a0001c0002t0002g0258 a0001c0002t0002g0259 a0004c0005t0002g0037 a0004c0005t0004g0001 a0005c0090t0001g0088 a0021c0055t0001g0329 a0021c0055t0001g0330 a0021c0167t0008g0005 a0026c0018t0003g0152 a0032c0054t0001g0210 a0043c0107t0004g0057 a0049c0047t0003g0092	13	362	0.0359	14	c.965 others(33): Show c.965-14051_965-14050insTATATATATATACA	SVEP1	ENSG00000165124.19	transcript	ENST00000374469.6	protein_coding	3/47			chr9	TogoVar
SVEP1_chr9_110360248_110584741	110528156	G G	GTGTGTAT others(7): Show GTGTGTATATATATA	intron_variant intron_variant	MODIFIER	HG01257.hp1 HG02040.hp1 HG02132.hp2 others(6): Show HG01257.hp1 HG02040.hp1 HG02132.hp2 HG02300.hp1 HG06807.hp2 NA18961.hp1 NA19004.hp1 NA19064.hp2 NA20805.hp2	a0001 a0003 a0010 others(5): Show a0001 a0003 a0010 a0028 a0030 a0057 a0076 a0108	a0001c0002 a0003c0144 a0010c0007 others(5): Show a0001c0002 a0003c0144 a0010c0007 a0028c0038 a0030c0034 a0057c0037 a0076c0072 a0108c0067	a0001c0002t0002 a0003c0144t0001 a0010c0007t0001 others(5): Show a0001c0002t0002 a0003c0144t0001 a0010c0007t0001 a0028c0038t0002 a0030c0034t0001 a0057c0037t0003 a0076c0072t0002 a0108c0067t0001	a0001c0002t0002g0177 a0003c0144t0001g0202 a0010c0007t0001g0066 others(6): Show a0001c0002t0002g0177 a0003c0144t0001g0202 a0010c0007t0001g0066 a0028c0038t0002g0294 a0028c0038t0002g0298 a0030c0034t0001g0084 a0057c0037t0003g0225 a0076c0072t0002g0269 a0108c0067t0001g0168	9	362	0.0249	14	c.965 others(33): Show c.965-14051_965-14050insTATATATATACACA	SVEP1	ENSG00000165124.19	transcript	ENST00000374469.6	protein_coding	3/47			chr9	TogoVar
SVEP1_chr9_110360248_110584741	110528156	G G	GTGTGTGT others(7): Show GTGTGTGTATATATA	intron_variant intron_variant	MODIFIER	HG01261.hp2 HG01978.hp2 HG02809.hp1 others(2): Show HG01261.hp2 HG01978.hp2 HG02809.hp1 NA18747.hp2 NA19002.hp1	a0007 a0010 a0018 others(2): Show a0007 a0010 a0018 a0039 a0054	a0007c0019 a0010c0007 a0018c0062 others(2): Show a0007c0019 a0010c0007 a0018c0062 a0039c0056 a0054c0044	a0007c0019t0001 a0010c0007t0002 a0018c0062t0001 others(2): Show a0007c0019t0001 a0010c0007t0002 a0018c0062t0001 a0039c0056t0003 a0054c0044t0002	a0007c0019t0001g0041 a0010c0007t0002g0223 a0018c0062t0001g0263 others(2): Show a0007c0019t0001g0041 a0010c0007t0002g0223 a0018c0062t0001g0263 a0039c0056t0003g0272 a0054c0044t0002g0289	5	362	0.0138	14	c.965 others(33): Show c.965-14051_965-14050insTATATATACACACA	SVEP1	ENSG00000165124.19	transcript	ENST00000374469.6	protein_coding	3/47			chr9	TogoVar
SVEP1_chr9_110360248_110584741	110528156	G G	GTGTGTGT others(7): Show GTGTGTGTGTGTATA	intron_variant intron_variant	MODIFIER	HG02451.hp2 HG02451.hp2	a0001 a0001	a0001c0060 a0001c0060	a0001c0060t0011 a0001c0060t0011	a0001c0060t0011g0008 a0001c0060t0011g0008	1	362	0.0028	14	c.965 others(33): Show c.965-14051_965-14050insTATACACACACACA	SVEP1	ENSG00000165124.19	transcript	ENST00000374469.6	protein_coding	3/47			chr9	TogoVar
SVEP1_chr9_110360248_110584741	110570467	C C	CGTGTGTG others(7): Show CGTGTGTGTGTGTGT	intron_variant intron_variant	MODIFIER	HG00438.hp2 HG00609.hp1 HG00621.hp2 others(25): Show HG00438.hp2 HG00609.hp1 HG00621.hp2 HG01109.hp2 HG01168.hp2 HG01169.hp1 HG01433.hp1 HG02074.hp2 HG02129.hp1 HG02258.hp1 HG02273.hp2 HG02280.hp2 HG02615.hp2 HG02630.hp2 HG02647.hp1 HG02717.hp1 HG02809.hp2 HG02896.hp2 HG02897.hp2 HG02976.hp2 HG03239.hp2 HG03491.hp2 HG03927.hp1 HG03942.hp2 NA18967.hp1 NA18995.hp2 NA19010.hp2 NA19043.hp1	a0001 a0004 a0005 others(13): Show a0001 a0004 a0005 a0006 a0009 a0012 a0016 a0030 a0031 a0042 a0052 a0061 a0078 a0081 a0091 a0100	a0001c0002 a0001c0052 a0004c0005 others(14): Show a0001c0002 a0001c0052 a0004c0005 a0005c0009 a0006c0003 a0009c0010 a0012c0026 a0016c0016 a0030c0034 a0031c0033 a0042c0049 a0052c0143 a0061c0152 a0078c0083 a0081c0102 a0091c0094 a0100c0106	a0001c0002t0002 a0001c0052t0001 a0004c0005t0003 others(16): Show a0001c0002t0002 a0001c0052t0001 a0004c0005t0003 a0005c0009t0001 a0005c0009t0002 a0006c0003t0003 a0009c0010t0001 a0009c0010t0003 a0012c0026t0001 a0016c0016t0001 a0030c0034t0005 a0031c0033t0005 a0042c0049t0004 a0052c0143t0002 a0061c0152t0003 a0078c0083t0001 a0081c0102t0005 a0091c0094t0001 a0100c0106t0002	a0001c0002t0002g0162 a0001c0002t0002g0283 a0001c0052t0001g0121 others(25): Show a0001c0002t0002g0162 a0001c0002t0002g0283 a0001c0052t0001g0121 a0004c0005t0003g0340 a0005c0009t0001g0174 a0005c0009t0002g0146 a0005c0009t0002g0227 a0006c0003t0003g0176 a0009c0010t0001g0284 a0009c0010t0003g0228 a0009c0010t0003g0256 a0012c0026t0001g0063 a0012c0026t0001g0100 a0012c0026t0001g0124 a0016c0016t0001g0220 a0016c0016t0001g0350 a0016c0016t0001g0351 a0030c0034t0005g0081 a0031c0033t0005g0042 a0031c0033t0005g0097 a0031c0033t0005g0098 a0042c0049t0004g0074 a0052c0143t0002g0080 a0061c0152t0003g0356 a0078c0083t0001g0257 a0081c0102t0005g0073 a0091c0094t0001g0046 a0100c0106t0002g0159	28	362	0.0774	14	c.531 others(31): Show c.531+8532_531+8545dupACACACACACACAC	SVEP1	ENSG00000165124.19	transcript	ENST00000374469.6	protein_coding	1/47			chr9	TogoVar
SVEP1_chr9_110360248_110584741	110572789	C C	CAAAAAAA others(7): Show CAAAAAAAAAAAAAA	intron_variant intron_variant	MODIFIER	HG03688.hp1 HG03688.hp1	a0002 a0002	a0002c0001 a0002c0001	a0002c0001t0001 a0002c0001t0001	a0002c0001t0001g0170 a0002c0001t0001g0170	1	362	0.0028	14	c.531 others(31): Show c.531+6210_531+6223dupTTTTTTTTTTTTTT	SVEP1	ENSG00000165124.19	transcript	ENST00000374469.6	protein_coding	1/47			chr9	TogoVar
SVIL_chr10_29452338_29639971	29481133	G G	GGTGTGTG others(7): Show GGTGTGTGTGTGTGT	intron_variant intron_variant	MODIFIER	HG00735.hp1 HG02683.hp2 HG03041.hp2 HG00735.hp1 HG02683.hp2 HG03041.hp2	a0003 a0004 a0040 a0003 a0004 a0040	a0003c0031 a0004c0017 a0040c0061 a0003c0031 a0004c0017 a0040c0061	a0003c0031t0003 a0004c0017t0001 a0040c0061t0001 a0003c0031t0003 a0004c0017t0001 a0040c0061t0001	a0003c0031t0003g0131 a0004c0017t0001g0216 a0040c0061t0001g0278 a0003c0031t0003g0131 a0004c0017t0001g0216 a0040c0061t0001g0278	3	290	0.0103	14	c.510 others(31): Show c.5101-334_5101-321dupACACACACACACAC	SVIL	ENSG00000197321.16	transcript	ENST00000355867.9	protein_coding	28/37			chr10	TogoVar
SVIL_chr10_29452338_29639971	29509330	G G	GGAGAGAG others(7): Show GGAGAGAGAGAGAGA	intron_variant intron_variant	MODIFIER	HG00140.hp1 HG04199.hp1 NA18944.hp1 others(1): Show HG00140.hp1 HG04199.hp1 NA18944.hp1 NA18944.hp2	a0001 a0004 a0049 a0001 a0004 a0049	a0001c0002 a0004c0006 a0049c0096 a0001c0002 a0004c0006 a0049c0096	a0001c0002t0001 a0004c0006t0001 a0049c0096t0001 a0001c0002t0001 a0004c0006t0001 a0049c0096t0001	a0001c0002t0001g0250 a0001c0002t0001g0258 a0004c0006t0001g0059 others(1): Show a0001c0002t0001g0250 a0001c0002t0001g0258 a0004c0006t0001g0059 a0049c0096t0001g0245	4	290	0.0138	14	c.351 others(33): Show c.3516+3391_3516+3404dupTCTCTCTCTCTCTC	SVIL	ENSG00000197321.16	transcript	ENST00000355867.9	protein_coding	17/37			chr10	TogoVar
SVIL_chr10_29452338_29639971	29509330	G G	GGAGGGAG others(7): Show GGAGGGAGAGAGAGA	intron_variant intron_variant	MODIFIER	NA18969.hp2 NA18984.hp1 NA18969.hp2 NA18984.hp1	a0003 a0003	a0003c0007 a0003c0007	a0003c0007t0001 a0003c0007t0001	a0003c0007t0001g0096 a0003c0007t0001g0128 a0003c0007t0001g0096 a0003c0007t0001g0128	2	290	0.0069	14	c.351 others(33): Show c.3516+3404_3516+3405insTCTCTCTCTCCCTC	SVIL	ENSG00000197321.16	transcript	ENST00000355867.9	protein_coding	17/37			chr10	TogoVar
SVIL_chr10_29452338_29639971	29509376	A A	AGAGAGAG others(7): Show AGAGAGAGAGAGAGG	intron_variant intron_variant	MODIFIER	NA19009.hp2 NA19009.hp2	a0001 a0001	a0001c0032 a0001c0032	a0001c0032t0002 a0001c0032t0002	a0001c0032t0002g0261 a0001c0032t0002g0261	1	290	0.0035	14	c.351 others(33): Show c.3516+3358_3516+3359insCCTCTCTCTCTCTC	SVIL	ENSG00000197321.16	transcript	ENST00000355867.9	protein_coding	17/37			chr10	TogoVar
SVOPL_chr7_138589285_138706362	138597641	C C	CGTGTGTG others(7): Show CGTGTGTGTGTGTGT	intron_variant intron_variant	MODIFIER	HG00423.hp2 HG00621.hp1 HG01109.hp1 others(9): Show HG00423.hp2 HG00621.hp1 HG01109.hp1 HG01346.hp2 HG02080.hp2 HG02132.hp2 HG02559.hp1 HG03486.hp2 NA18612.hp1 NA18747.hp1 NA18960.hp2 NA19058.hp1	a0001 a0002 a0003 others(1): Show a0001 a0002 a0003 a0004	a0001c0001 a0001c0002 a0002c0003 others(4): Show a0001c0001 a0001c0002 a0002c0003 a0002c0004 a0002c0006 a0003c0011 a0004c0012	a0001c0001t0001 a0001c0002t0001 a0001c0002t0002 others(6): Show a0001c0001t0001 a0001c0002t0001 a0001c0002t0002 a0002c0003t0001 a0002c0004t0001 a0002c0004t0002 a0002c0006t0002 a0003c0011t0001 a0004c0012t0001	a0001c0001t0001g0085 a0001c0002t0001g0209 a0001c0002t0001g0214 others(9): Show a0001c0001t0001g0085 a0001c0002t0001g0209 a0001c0002t0001g0214 a0001c0002t0002g0204 a0002c0003t0001g0113 a0002c0004t0001g0081 a0002c0004t0002g0127 a0002c0006t0002g0167 a0002c0006t0002g0247 a0003c0011t0001g0310 a0004c0012t0001g0272 a0004c0012t0001g0300	12	360	0.0333	14	c.135 others(33): Show c.1354-1125_1354-1112dupACACACACACACAC	SVOPL	ENSG00000157703.16	transcript	ENST00000674285.1	protein_coding	14/15			chr7	TogoVar
SVOPL_chr7_138589285_138706362	138602441	C C	CTATATAT others(7): Show CTATATATATATATA	intron_variant intron_variant	MODIFIER	HG02572.hp1 HG03927.hp2 HG02572.hp1 HG03927.hp2	a0001 a0001	a0001c0001 a0001c0005 a0001c0001 a0001c0005	a0001c0001t0001 a0001c0005t0001 a0001c0001t0001 a0001c0005t0001	a0001c0001t0001g0187 a0001c0005t0001g0063 a0001c0001t0001g0187 a0001c0005t0001g0063	2	360	0.0056	14	c.135 others(33): Show c.1354-5925_1354-5912dupTATATATATATATA	SVOPL	ENSG00000157703.16	transcript	ENST00000674285.1	protein_coding	14/15			chr7	TogoVar
SVOPL_chr7_138589285_138706362	138615560	C C	CAAAAAAA others(7): Show CAAAAAAAAAAAAAA	intron_variant intron_variant	MODIFIER	HG03139.hp1 NA20300.hp2 HG03139.hp1 NA20300.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0011 a0001c0001t0001g0346 a0001c0001t0001g0011 a0001c0001t0001g0346	2	360	0.0056	14	c.135 others(33): Show c.1353+5472_1353+5485dupTTTTTTTTTTTTTT	SVOPL	ENSG00000157703.16	transcript	ENST00000674285.1	protein_coding	14/15			chr7	TogoVar
SVOPL_chr7_138589285_138706362	138629153	G G	GTGTGTGT others(7): Show GTGTGTGTGTGTGTA	intron_variant intron_variant	MODIFIER	HG01433.hp2 HG01515.hp2 HG01517.hp1 others(1): Show HG01433.hp2 HG01515.hp2 HG01517.hp1 NA21309.hp2	a0002 a0002	a0002c0003 a0002c0004 a0002c0003 a0002c0004	a0002c0003t0001 a0002c0004t0001 a0002c0003t0001 a0002c0004t0001	a0002c0003t0001g0327 a0002c0004t0001g0125 a0002c0004t0001g0126 others(1): Show a0002c0003t0001g0327 a0002c0004t0001g0125 a0002c0004t0001g0126 a0002c0004t0001g0296	4	360	0.0111	14	c.864 others(29): Show c.864-791_864-790insTACACACACACACA	SVOPL	ENSG00000157703.16	transcript	ENST00000674285.1	protein_coding	10/15			chr7	TogoVar
SVOPL_chr7_138589285_138706362	138631960	T T	TCACACAC others(7): Show TCACACACACACACA	intron_variant intron_variant	MODIFIER	HG01070.hp1 HG01071.hp2 HG02109.hp2 others(23): Show HG01070.hp1 HG01071.hp2 HG02109.hp2 HG02486.hp2 HG02523.hp1 HG02523.hp2 HG02572.hp1 HG02647.hp1 HG03139.hp1 HG03486.hp1 HG03669.hp1 NA18522.hp1 NA18941.hp1 NA18952.hp2 NA18966.hp1 NA18966.hp2 NA18974.hp2 NA18982.hp1 NA18991.hp2 NA18999.hp2 NA19000.hp1 NA19002.hp2 NA19056.hp2 NA19074.hp2 NA19085.hp2 NA20905.hp2	a0001 a0002 a0003 others(2): Show a0001 a0002 a0003 a0005 a0010	a0001c0001 a0001c0002 a0001c0005 others(9): Show a0001c0001 a0001c0002 a0001c0005 a0001c0014 a0001c0018 a0002c0003 a0002c0004 a0002c0010 a0003c0007 a0003c0009 a0005c0017 a0010c0034	a0001c0001t0001 a0001c0001t0002 a0001c0001t0005 others(13): Show a0001c0001t0001 a0001c0001t0002 a0001c0001t0005 a0001c0002t0009 a0001c0005t0001 a0001c0005t0002 a0001c0014t0006 a0001c0018t0001 a0002c0003t0001 a0002c0004t0001 a0002c0010t0001 a0003c0007t0001 a0003c0007t0004 a0003c0009t0002 a0005c0017t0001 a0010c0034t0001	a0001c0001t0001g0011 a0001c0001t0001g0039 a0001c0001t0001g0303 others(23): Show a0001c0001t0001g0011 a0001c0001t0001g0039 a0001c0001t0001g0303 a0001c0001t0001g0304 a0001c0001t0001g0306 a0001c0001t0001g0307 a0001c0001t0002g0064 a0001c0001t0002g0340 a0001c0001t0005g0106 a0001c0002t0009g0217 a0001c0005t0001g0063 a0001c0005t0002g0103 a0001c0005t0002g0255 a0001c0014t0006g0355 a0001c0018t0001g0056 a0002c0003t0001g0095 a0002c0003t0001g0144 a0002c0003t0001g0146 a0002c0004t0001g0194 a0002c0004t0001g0195 a0002c0010t0001g0138 a0003c0007t0001g0077 a0003c0007t0004g0092 a0003c0009t0002g0131 a0005c0017t0001g0107 a0010c0034t0001g0317	26	360	0.0722	14	c.790 others(31): Show c.790-1852_790-1839dupTGTGTGTGTGTGTG	SVOPL	ENSG00000157703.16	transcript	ENST00000674285.1	protein_coding	9/15			chr7	TogoVar
SVOPL_chr7_138589285_138706362	138641814	T T	TTATATAT others(7): Show TTATATATATATATA	intron_variant intron_variant	MODIFIER	HG00609.hp2 HG01993.hp2 HG02145.hp1 others(18): Show HG00609.hp2 HG01993.hp2 HG02145.hp1 HG02148.hp1 HG02165.hp1 HG02165.hp2 HG03130.hp1 HG03239.hp1 HG03927.hp1 NA18952.hp1 NA18969.hp2 NA18970.hp1 NA18973.hp1 NA18974.hp1 NA18991.hp1 NA18999.hp2 NA19012.hp2 NA19060.hp2 NA19063.hp2 NA19065.hp1 NA19082.hp1	a0001 a0002 a0013 a0001 a0002 a0013	a0001c0001 a0001c0002 a0001c0005 others(5): Show a0001c0001 a0001c0002 a0001c0005 a0001c0027 a0002c0003 a0002c0006 a0002c0010 a0013c0029	a0001c0001t0001 a0001c0001t0002 a0001c0001t0003 others(9): Show a0001c0001t0001 a0001c0001t0002 a0001c0001t0003 a0001c0002t0001 a0001c0005t0002 a0001c0027t0003 a0002c0003t0001 a0002c0003t0005 a0002c0006t0002 a0002c0010t0001 a0002c0010t0002 a0013c0029t0002	a0001c0001t0001g0148 a0001c0001t0001g0216 a0001c0001t0001g0268 others(18): Show a0001c0001t0001g0148 a0001c0001t0001g0216 a0001c0001t0001g0268 a0001c0001t0002g0022 a0001c0001t0002g0025 a0001c0001t0002g0104 a0001c0001t0002g0340 a0001c0001t0003g0105 a0001c0002t0001g0189 a0001c0005t0002g0023 a0001c0005t0002g0038 a0001c0005t0002g0155 a0001c0005t0002g0207 a0001c0005t0002g0299 a0001c0027t0003g0206 a0002c0003t0001g0288 a0002c0003t0005g0031 a0002c0006t0002g0032 a0002c0010t0001g0253 a0002c0010t0002g0181 a0013c0029t0002g0024	21	360	0.0583	14	c.789 others(31): Show c.789+2889_789+2902dupTATATATATATATA	SVOPL	ENSG00000157703.16	transcript	ENST00000674285.1	protein_coding	9/15			chr7	TogoVar
SVOPL_chr7_138589285_138706362	138642831	C C	CAAAAAAA others(7): Show CAAAAAAAAAAAAAA	intron_variant intron_variant	MODIFIER	HG02818.hp2 HG02818.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0325 a0001c0001t0001g0325	1	360	0.0028	14	c.789 others(31): Show c.789+1872_789+1885dupTTTTTTTTTTTTTT	SVOPL	ENSG00000157703.16	transcript	ENST00000674285.1	protein_coding	9/15			chr7	TogoVar
SVOPL_chr7_138589285_138706362	138693529	A A	AAGAAAGA others(7): Show AAGAAAGAAAGAAAG	intron_variant intron_variant	MODIFIER	HG02895.hp1 HG02895.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0068 a0001c0001t0001g0068	1	360	0.0028	14	c.-35 others(31): Show c.-35+7648_-35+7649insCTTTCTTTCTTTCT	SVOPL	ENSG00000157703.16	transcript	ENST00000674285.1	protein_coding	1/15			chr7	TogoVar
SVOPL_chr7_138589285_138706362	138698172	G G	GGGGAAAA others(7): Show GGGGAAAAGAAGGGA	intron_variant intron_variant	MODIFIER	NA18974.hp2 NA18974.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0039 a0001c0001t0001g0039	1	360	0.0028	14	c.-35 others(31): Show c.-35+3005_-35+3006insTCCCTTCTTTTCCC	SVOPL	ENSG00000157703.16	transcript	ENST00000674285.1	protein_coding	1/15			chr7	TogoVar
SVOP_chr12_108902741_109026068	108936023	T T	TACACACA others(7): Show TACACACACACACAC	intron_variant intron_variant	MODIFIER	HG01106.hp1 HG01123.hp1 HG01433.hp1 others(13): Show HG01106.hp1 HG01123.hp1 HG01433.hp1 HG02280.hp1 HG02630.hp2 HG02717.hp1 HG02723.hp1 HG02970.hp1 HG02976.hp1 HG03041.hp1 HG03130.hp2 HG03209.hp1 HG04199.hp2 NA19000.hp1 NA20300.hp1 NA20300.hp2	a0001 a0001	a0001c0001 a0001c0002 a0001c0003 others(1): Show a0001c0001 a0001c0002 a0001c0003 a0001c0004	a0001c0001t0003 a0001c0001t0006 a0001c0001t0012 others(9): Show a0001c0001t0003 a0001c0001t0006 a0001c0001t0012 a0001c0001t0041 a0001c0001t0049 a0001c0002t0010 a0001c0002t0014 a0001c0002t0021 a0001c0002t0023 a0001c0002t0056 a0001c0003t0016 a0001c0004t0016	a0001c0001t0003g0017 a0001c0001t0003g0030 a0001c0001t0003g0043 others(13): Show a0001c0001t0003g0017 a0001c0001t0003g0030 a0001c0001t0003g0043 a0001c0001t0006g0220 a0001c0001t0006g0247 a0001c0001t0012g0259 a0001c0001t0041g0013 a0001c0001t0049g0016 a0001c0002t0010g0070 a0001c0002t0014g0281 a0001c0002t0021g0150 a0001c0002t0023g0182 a0001c0002t0056g0152 a0001c0003t0016g0169 a0001c0003t0016g0234 a0001c0004t0016g0164	16	288	0.0556	14	c.971 others(31): Show c.971+1227_971+1240dupGTGTGTGTGTGTGT	SVOP	ENSG00000166111.10	transcript	ENST00000610966.5	protein_coding	10/15			chr12	TogoVar
SWAP70_chr11_9659077_9757993	9671403	T T	TATAAATA others(7): Show TATAAATAAAATAAA	intron_variant intron_variant	MODIFIER	HG02486.hp2 HG02572.hp1 HG02717.hp2 others(9): Show HG02486.hp2 HG02572.hp1 HG02717.hp2 HG02886.hp1 HG02895.hp1 HG02897.hp1 HG03041.hp2 HG03195.hp1 HG03486.hp2 HG03579.hp2 NA19240.hp2 NA20300.hp2	a0001 a0002 a0001 a0002	a0001c0003 a0001c0008 a0002c0001 others(1): Show a0001c0003 a0001c0008 a0002c0001 a0002c0005	a0001c0003t0003 a0001c0008t0009 a0002c0001t0001 others(1): Show a0001c0003t0003 a0001c0008t0009 a0002c0001t0001 a0002c0005t0001	a0001c0003t0003g0079 a0001c0008t0009g0081 a0002c0001t0001g0074 others(9): Show a0001c0003t0003g0079 a0001c0008t0009g0081 a0002c0001t0001g0074 a0002c0001t0001g0075 a0002c0001t0001g0076 a0002c0001t0001g0077 a0002c0001t0001g0078 a0002c0001t0001g0080 a0002c0001t0001g0082 a0002c0001t0001g0083 a0002c0005t0001g0249 a0002c0005t0001g0250	12	294	0.0408	14	c.99+ others(29): Show c.99+7130_99+7131insTAAAATAAAATAAA	SWAP70	ENSG00000133789.15	transcript	ENST00000318950.11	protein_coding	1/11		INFO_REALIGN_3_PRIME	chr11	TogoVar
SWAP70_chr11_9659077_9757993	9672195	C C	CTATGTAT others(7): Show CTATGTATATATATA	intron_variant intron_variant	MODIFIER	HG00323.hp1 HG01123.hp2 HG02055.hp1 others(2): Show HG00323.hp1 HG01123.hp2 HG02055.hp1 HG03669.hp1 HG03942.hp1	a0002 a0002	a0002c0001 a0002c0001	a0002c0001t0001 a0002c0001t0001	a0002c0001t0001g0272 a0002c0001t0001g0273 a0002c0001t0001g0274 others(2): Show a0002c0001t0001g0272 a0002c0001t0001g0273 a0002c0001t0001g0274 a0002c0001t0001g0275 a0002c0001t0001g0288	5	294	0.0170	14	c.99+ others(29): Show c.99+7920_99+7921insGTATATATATATAT	SWAP70	ENSG00000133789.15	transcript	ENST00000318950.11	protein_coding	1/11		INFO_REALIGN_3_PRIME	chr11	TogoVar

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