Joint Open Genome and Omics Platform (JoGo)

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Snpeff annotation impact detail

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regionname	pos	ref	alt	annotation	impact	samples	ahapids	chapids	thapids	thapids	ac	an	af	len	hgvs_c	genename	geneid	featuretype	featureid	transcript_biotype	rank	distance	status	chr	external
SYN2_chr3_11999388_12197032	12057287	C C	CTGTCTGT others(7): Show CTGTCTGTGTGTGTG	intron_variant intron_variant	MODIFIER	HG00558.hp2 HG01109.hp2 HG01243.hp2 others(9): Show HG00558.hp2 HG01109.hp2 HG01243.hp2 HG02071.hp1 HG02129.hp1 HG02132.hp1 HG04228.hp1 NA18994.hp1 NA19002.hp2 NA19056.hp2 NA19060.hp2 NA19240.hp2	a0002 a0008 a0002 a0008	a0002c0002 a0008c0008 a0002c0002 a0008c0008	a0002c0002t0001 a0008c0008t0001 a0002c0002t0001 a0008c0008t0001	a0002c0002t0001g0061 a0002c0002t0001g0076 a0002c0002t0001g0082 others(9): Show a0002c0002t0001g0061 a0002c0002t0001g0076 a0002c0002t0001g0082 a0002c0002t0001g0083 a0002c0002t0001g0085 a0002c0002t0001g0086 a0002c0002t0001g0087 a0002c0002t0001g0095 a0002c0002t0001g0107 a0002c0002t0001g0111 a0002c0002t0001g0114 a0008c0008t0001g0116	12	264	0.0455	14	c.377 others(33): Show c.377+52362_377+52363insCTGTGTGTGTGTGT	SYN2	ENSG00000157152.17	transcript	ENST00000621198.5	protein_coding	1/12		INFO_REALIGN_3_PRIME	chr3	TogoVar
SYN2_chr3_11999388_12197032	12057287	C C	CTGTGTGT others(7): Show CTGTGTGTGTGTGTG	intron_variant intron_variant	MODIFIER	HG01099.hp2 HG01123.hp2 HG02922.hp2 others(5): Show HG01099.hp2 HG01123.hp2 HG02922.hp2 HG02970.hp2 HG02976.hp2 HG03540.hp1 HG03579.hp1 NA19043.hp1	a0001 a0003 a0005 a0001 a0003 a0005	a0001c0001 a0003c0003 a0005c0005 a0001c0001 a0003c0003 a0005c0005	a0001c0001t0002 a0003c0003t0001 a0005c0005t0013 a0001c0001t0002 a0003c0003t0001 a0005c0005t0013	a0001c0001t0002g0020 a0001c0001t0002g0021 a0001c0001t0002g0023 others(5): Show a0001c0001t0002g0020 a0001c0001t0002g0021 a0001c0001t0002g0023 a0003c0003t0001g0024 a0003c0003t0001g0030 a0003c0003t0001g0032 a0003c0003t0001g0033 a0005c0005t0013g0261	8	264	0.0303	14	c.377 others(33): Show c.377+52383_377+52396dupGTGTGTGTGTGTGT	SYN2	ENSG00000157152.17	transcript	ENST00000621198.5	protein_coding	1/12		INFO_REALIGN_3_PRIME	chr3	TogoVar
SYN2_chr3_11999388_12197032	12098856	C C	CATATATA others(7): Show CATATATATATATAT	intron_variant intron_variant	MODIFIER	HG00735.hp1 NA18612.hp2 NA18945.hp1 others(17): Show HG00735.hp1 NA18612.hp2 NA18945.hp1 NA18947.hp2 NA18955.hp2 NA18959.hp2 NA18961.hp2 NA18965.hp1 NA18973.hp2 NA18982.hp2 NA19002.hp1 NA19010.hp1 NA19055.hp2 NA19060.hp1 NA19068.hp1 NA19077.hp1 NA19080.hp2 NA19082.hp1 NA19088.hp1 NA20752.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0002 a0001c0001t0002	a0001c0001t0002g0205 a0001c0001t0002g0206 a0001c0001t0002g0207 others(17): Show a0001c0001t0002g0205 a0001c0001t0002g0206 a0001c0001t0002g0207 a0001c0001t0002g0208 a0001c0001t0002g0209 a0001c0001t0002g0210 a0001c0001t0002g0222 a0001c0001t0002g0224 a0001c0001t0002g0225 a0001c0001t0002g0226 a0001c0001t0002g0229 a0001c0001t0002g0230 a0001c0001t0002g0231 a0001c0001t0002g0233 a0001c0001t0002g0237 a0001c0001t0002g0238 a0001c0001t0002g0239 a0001c0001t0002g0241 a0001c0001t0002g0242 a0001c0001t0002g0243	20	264	0.0758	14	c.378 others(33): Show c.378-41783_378-41770dupTATATATATATATA	SYN2	ENSG00000157152.17	transcript	ENST00000621198.5	protein_coding	1/12		INFO_REALIGN_3_PRIME	chr3	TogoVar
SYN2_chr3_11999388_12197032	12171914	A A	ATTAAGTG others(7): Show ATTAAGTGTTGTAGC	intron_variant intron_variant	MODIFIER	HG02129.hp1 HG02129.hp1	a0002 a0002	a0002c0002 a0002c0002	a0002c0002t0001 a0002c0002t0001	a0002c0002t0001g0061 a0002c0002t0001g0061	1	264	0.0038	14	c.130 others(33): Show c.1308+2013_1308+2026dupGTGTTGTAGCTTAA	SYN2	ENSG00000157152.17	transcript	ENST00000621198.5	protein_coding	10/12		INFO_REALIGN_3_PRIME	chr3	TogoVar
SYN3_chr22_32502820_33063381	32510984	C C	CGTGTGTG others(7): Show CGTGTGTGTGTGTGT	3_prime_UTR_variant 3_prime_UTR_variant	MODIFIER	HG01074.hp1 HG01358.hp1 HG01978.hp1 others(12): Show HG01074.hp1 HG01358.hp1 HG01978.hp1 HG02572.hp1 HG02886.hp1 HG02895.hp2 HG03130.hp1 HG03453.hp1 HG03486.hp1 HG03688.hp1 HG03831.hp1 HG03942.hp2 HG06807.hp1 NA18957.hp1 NA19043.hp1	a0001 a0002 a0001 a0002	a0001c0001 a0001c0003 a0002c0002 a0001c0001 a0001c0003 a0002c0002	a0001c0001t0005 a0001c0001t0025 a0001c0001t0047 others(7): Show a0001c0001t0005 a0001c0001t0025 a0001c0001t0047 a0001c0001t0058 a0001c0001t0061 a0001c0003t0005 a0002c0002t0005 a0002c0002t0022 a0002c0002t0046 a0002c0002t0048	a0001c0001t0005g0158 a0001c0001t0025g0023 a0001c0001t0025g0044 others(12): Show a0001c0001t0005g0158 a0001c0001t0025g0023 a0001c0001t0025g0044 a0001c0001t0047g0091 a0001c0001t0058g0180 a0001c0001t0061g0034 a0001c0003t0005g0098 a0001c0003t0005g0099 a0002c0002t0005g0089 a0002c0002t0005g0130 a0002c0002t0005g0141 a0002c0002t0022g0001 a0002c0002t0022g0009 a0002c0002t0046g0100 a0002c0002t0048g0084	15	184	0.0815	14	c.26 others(25): Show c.2694_*2707dupACACACACACACAC	SYN3	ENSG00000185666.16	transcript	ENST00000358763.7	protein_coding	14/14	2707		chr22	TogoVar
SYN3_chr22_32502820_33063381	32650226	T T	TCCCTCCC others(7): Show TCCCTCCCTCCCTCC	intron_variant intron_variant	MODIFIER	HG01192.hp1 HG01192.hp1	a0002 a0002	a0002c0002 a0002c0002	a0002c0002t0004 a0002c0002t0004	a0002c0002t0004g0059 a0002c0002t0004g0059	1	184	0.0054	14	c.712 others(33): Show c.712-53491_712-53490insGGAGGGAGGGAGGG	SYN3	ENSG00000185666.16	transcript	ENST00000358763.7	protein_coding	6/13			chr22	TogoVar
SYN3_chr22_32502820_33063381	32650258	C C	CCTCCCTC others(7): Show CCTCCCTCCCTCCCT	intron_variant intron_variant	MODIFIER	HG01099.hp1 HG01099.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0021 a0001c0001t0021	a0001c0001t0021g0149 a0001c0001t0021g0149	1	184	0.0054	14	c.712 others(33): Show c.712-53523_712-53522insAGGGAGGGAGGGAG	SYN3	ENSG00000185666.16	transcript	ENST00000358763.7	protein_coding	6/13			chr22	TogoVar
SYN3_chr22_32502820_33063381	32650260	T T	TCCCTCCC others(7): Show TCCCTCCCACCCTCC	intron_variant intron_variant	MODIFIER	HG02630.hp2 HG02630.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0010 a0001c0001t0010	a0001c0001t0010g0165 a0001c0001t0010g0165	1	184	0.0054	14	c.712 others(33): Show c.712-53525_712-53524insGGAGGGTGGGAGGG	SYN3	ENSG00000185666.16	transcript	ENST00000358763.7	protein_coding	6/13			chr22	TogoVar
SYN3_chr22_32502820_33063381	32650260	T T	TCCCTCCC others(7): Show TCCCTCCCTCCCTCC	intron_variant intron_variant	MODIFIER	HG02559.hp2 HG02965.hp2 NA19240.hp1 HG02559.hp2 HG02965.hp2 NA19240.hp1	a0001 a0002 a0001 a0002	a0001c0001 a0002c0002 a0001c0001 a0002c0002	a0001c0001t0032 a0001c0001t0045 a0002c0002t0055 a0001c0001t0032 a0001c0001t0045 a0002c0002t0055	a0001c0001t0032g0150 a0001c0001t0045g0068 a0002c0002t0055g0063 a0001c0001t0032g0150 a0001c0001t0045g0068 a0002c0002t0055g0063	3	184	0.0163	14	c.712 others(33): Show c.712-53525_712-53524insGGAGGGAGGGAGGG	SYN3	ENSG00000185666.16	transcript	ENST00000358763.7	protein_coding	6/13			chr22	TogoVar
SYN3_chr22_32502820_33063381	32758681	C C	CATATATA others(7): Show CATATATATATATAT	intron_variant intron_variant	MODIFIER	HG02698.hp2 HG02698.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0077 a0001c0001t0077	a0001c0001t0077g0013 a0001c0001t0077g0013	1	184	0.0054	14	c.711 others(35): Show c.711+106220_711+106233dupATATATATATATAT	SYN3	ENSG00000185666.16	transcript	ENST00000358763.7	protein_coding	6/13			chr22	TogoVar
SYN3_chr22_32502820_33063381	32780068	C C	CAAAAAAA others(7): Show CAAAAAAAAAAAAAA	intron_variant intron_variant	MODIFIER	HG00140.hp2 HG00323.hp2 HG00735.hp2 others(73): Show HG00140.hp2 HG00323.hp2 HG00735.hp2 HG00738.hp2 HG00741.hp2 HG01069.hp1 HG01069.hp2 HG01071.hp1 HG01099.hp1 HG01106.hp1 HG01109.hp1 HG01109.hp2 HG01175.hp2 HG01258.hp2 HG01261.hp2 HG01433.hp2 HG01884.hp2 HG01978.hp1 HG02040.hp1 HG02056.hp1 HG02071.hp1 HG02071.hp2 HG02074.hp1 HG02165.hp1 HG02165.hp2 HG02257.hp1 HG02258.hp2 HG02280.hp1 HG02559.hp1 HG02559.hp2 HG02622.hp2 HG02630.hp1 HG02630.hp2 HG02647.hp2 HG02683.hp2 HG02698.hp2 HG02717.hp1 HG02723.hp1 HG02723.hp2 HG02886.hp2 HG02895.hp2 HG02922.hp2 HG02965.hp1 HG02965.hp2 HG02970.hp1 HG03017.hp1 HG03017.hp2 HG03041.hp2 HG03239.hp1 HG03239.hp2 HG03486.hp2 HG03492.hp1 HG03516.hp1 HG03540.hp1 HG03540.hp2 HG03579.hp1 HG03688.hp1 HG03704.hp1 HG03831.hp1 HG03831.hp2 HG03942.hp1 HG04184.hp1 HG06807.hp1 NA18906.hp2 NA18957.hp2 NA18984.hp1 NA19030.hp2 NA19043.hp2 NA19063.hp1 NA19065.hp1 NA19065.hp2 NA19088.hp1 NA19091.hp1 NA19240.hp1 NA20129.hp1 NA20752.hp2	a0001 a0002 a0001 a0002	a0001c0001 a0001c0003 a0001c0004 others(2): Show a0001c0001 a0001c0003 a0001c0004 a0001c0005 a0002c0002	a0001c0001t0001 a0001c0001t0002 a0001c0001t0003 others(48): Show a0001c0001t0001 a0001c0001t0002 a0001c0001t0003 a0001c0001t0006 a0001c0001t0007 a0001c0001t0008 a0001c0001t0009 a0001c0001t0010 a0001c0001t0012 a0001c0001t0013 a0001c0001t0014 a0001c0001t0015 a0001c0001t0018 a0001c0001t0019 a0001c0001t0021 a0001c0001t0024 a0001c0001t0025 a0001c0001t0026 a0001c0001t0027 a0001c0001t0031 a0001c0001t0032 a0001c0001t0033 a0001c0001t0034 a0001c0001t0038 a0001c0001t0041 a0001c0001t0042 a0001c0001t0044 a0001c0001t0045 a0001c0001t0057 a0001c0001t0059 a0001c0001t0062 a0001c0001t0066 a0001c0001t0067 a0001c0001t0070 a0001c0001t0072 a0001c0001t0076 a0001c0001t0077 a0001c0001t0078 a0001c0001t0079 a0001c0003t0005 a0001c0003t0037 a0001c0004t0017 a0001c0004t0056 a0001c0005t0029 a0002c0002t0004 a0002c0002t0005 a0002c0002t0011 a0002c0002t0022 a0002c0002t0023 a0002c0002t0051 a0002c0002t0055	a0001c0001t0001g0020 a0001c0001t0001g0033 a0001c0001t0001g0035 others(73): Show a0001c0001t0001g0020 a0001c0001t0001g0033 a0001c0001t0001g0035 a0001c0001t0001g0051 a0001c0001t0001g0056 a0001c0001t0001g0097 a0001c0001t0001g0113 a0001c0001t0001g0114 a0001c0001t0001g0179 a0001c0001t0002g0018 a0001c0001t0002g0024 a0001c0001t0002g0072 a0001c0001t0002g0118 a0001c0001t0002g0123 a0001c0001t0003g0016 a0001c0001t0003g0070 a0001c0001t0003g0157 a0001c0001t0003g0176 a0001c0001t0006g0012 a0001c0001t0006g0046 a0001c0001t0006g0073 a0001c0001t0006g0177 a0001c0001t0007g0079 a0001c0001t0007g0172 a0001c0001t0008g0047 a0001c0001t0009g0019 a0001c0001t0010g0165 a0001c0001t0012g0173 a0001c0001t0013g0121 a0001c0001t0013g0135 a0001c0001t0013g0139 a0001c0001t0014g0101 a0001c0001t0015g0043 a0001c0001t0015g0132 a0001c0001t0018g0106 a0001c0001t0019g0030 a0001c0001t0021g0149 a0001c0001t0024g0065 a0001c0001t0024g0147 a0001c0001t0025g0044 a0001c0001t0026g0171 a0001c0001t0027g0160 a0001c0001t0031g0143 a0001c0001t0032g0150 a0001c0001t0033g0148 a0001c0001t0034g0108 a0001c0001t0038g0038 a0001c0001t0041g0096 a0001c0001t0042g0088 a0001c0001t0044g0077 a0001c0001t0045g0068 a0001c0001t0057g0168 a0001c0001t0059g0078 a0001c0001t0062g0181 a0001c0001t0066g0052 a0001c0001t0067g0050 a0001c0001t0070g0006 a0001c0001t0072g0031 a0001c0001t0076g0069 a0001c0001t0077g0013 a0001c0001t0078g0003 a0001c0001t0079g0004 a0001c0003t0005g0099 a0001c0003t0037g0103 a0001c0004t0017g0055 a0001c0004t0056g0021 a0001c0005t0029g0116 a0002c0002t0004g0110 a0002c0002t0004g0152 a0002c0002t0005g0130 a0002c0002t0005g0141 a0002c0002t0011g0102 a0002c0002t0022g0001 a0002c0002t0023g0164 a0002c0002t0051g0142 a0002c0002t0055g0063	76	184	0.4130	14	c.711 others(33): Show c.711+84846_711+84847insTTTTTTTTTTTTTT	SYN3	ENSG00000185666.16	transcript	ENST00000358763.7	protein_coding	6/13			chr22	TogoVar
SYN3_chr22_32502820_33063381	32780078	A A	AAAAAAAA others(7): Show AAAAAAAAAAAAAAG	intron_variant intron_variant	MODIFIER	HG00323.hp1 HG00673.hp1 HG00741.hp1 others(19): Show HG00323.hp1 HG00673.hp1 HG00741.hp1 HG01070.hp1 HG01071.hp2 HG01175.hp1 HG01258.hp1 HG01358.hp1 HG01358.hp2 HG01496.hp2 HG01884.hp1 HG01978.hp2 HG02055.hp2 HG02258.hp1 HG02572.hp1 HG02818.hp1 HG02922.hp1 HG03195.hp2 HG03492.hp2 NA18960.hp2 NA19043.hp1 NA20129.hp2	a0001 a0002 a0001 a0002	a0001c0001 a0001c0003 a0001c0006 others(2): Show a0001c0001 a0001c0003 a0001c0006 a0001c0007 a0002c0002	a0001c0001t0001 a0001c0001t0002 a0001c0001t0003 others(16): Show a0001c0001t0001 a0001c0001t0002 a0001c0001t0003 a0001c0001t0005 a0001c0001t0006 a0001c0001t0008 a0001c0001t0009 a0001c0001t0010 a0001c0001t0014 a0001c0001t0015 a0001c0001t0026 a0001c0001t0029 a0001c0001t0058 a0001c0003t0004 a0001c0006t0007 a0001c0007t0080 a0002c0002t0004 a0002c0002t0011 a0002c0002t0046	a0001c0001t0001g0117 a0001c0001t0002g0057 a0001c0001t0003g0136 others(19): Show a0001c0001t0001g0117 a0001c0001t0002g0057 a0001c0001t0003g0136 a0001c0001t0003g0137 a0001c0001t0003g0151 a0001c0001t0003g0169 a0001c0001t0005g0158 a0001c0001t0006g0138 a0001c0001t0008g0005 a0001c0001t0009g0170 a0001c0001t0010g0183 a0001c0001t0014g0083 a0001c0001t0015g0058 a0001c0001t0026g0026 a0001c0001t0029g0127 a0001c0001t0058g0180 a0001c0003t0004g0040 a0001c0006t0007g0074 a0001c0007t0080g0112 a0002c0002t0004g0027 a0002c0002t0011g0166 a0002c0002t0046g0100	22	184	0.1196	14	c.711 others(33): Show c.711+84836_711+84837insCTTTTTTTTTTTTT	SYN3	ENSG00000185666.16	transcript	ENST00000358763.7	protein_coding	6/13			chr22	TogoVar
SYN3_chr22_32502820_33063381	32869330	T T	TTCTCTCT others(7): Show TTCTCTCTCTCTCTC	intron_variant intron_variant	MODIFIER	HG00140.hp2 HG01192.hp1 HG01261.hp1 others(11): Show HG00140.hp2 HG01192.hp1 HG01261.hp1 HG02145.hp2 HG03017.hp2 HG03239.hp1 HG03704.hp2 HG03942.hp2 HG04228.hp2 NA18980.hp2 NA18984.hp1 NA18995.hp2 NA19043.hp1 NA19240.hp2	a0001 a0002 a0001 a0002	a0001c0001 a0001c0004 a0002c0002 a0001c0001 a0001c0004 a0002c0002	a0001c0001t0001 a0001c0001t0007 a0001c0001t0013 others(9): Show a0001c0001t0001 a0001c0001t0007 a0001c0001t0013 a0001c0001t0015 a0001c0001t0059 a0001c0001t0073 a0001c0001t0075 a0001c0004t0036 a0002c0002t0002 a0002c0002t0004 a0002c0002t0022 a0002c0002t0046	a0001c0001t0001g0008 a0001c0001t0007g0042 a0001c0001t0007g0079 others(11): Show a0001c0001t0001g0008 a0001c0001t0007g0042 a0001c0001t0007g0079 a0001c0001t0013g0139 a0001c0001t0015g0132 a0001c0001t0059g0078 a0001c0001t0073g0175 a0001c0001t0075g0178 a0001c0004t0036g0010 a0002c0002t0002g0085 a0002c0002t0004g0059 a0002c0002t0004g0154 a0002c0002t0022g0009 a0002c0002t0046g0100	14	184	0.0761	14	c.462 others(29): Show c.462-219_462-206dupGAGAGAGAGAGAGA	SYN3	ENSG00000185666.16	transcript	ENST00000358763.7	protein_coding	4/13			chr22	TogoVar
SYN3_chr22_32502820_33063381	32869367	T T	TCTCTCTC others(7): Show TCTCTCTCTCTCTCA	intron_variant intron_variant	MODIFIER	HG00140.hp1 HG00735.hp2 HG01099.hp2 others(5): Show HG00140.hp1 HG00735.hp2 HG01099.hp2 HG01175.hp2 HG02056.hp1 HG02071.hp1 HG03017.hp1 NA18984.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0002 a0001c0001t0003 others(2): Show a0001c0001t0001 a0001c0001t0002 a0001c0001t0003 a0001c0001t0015 a0001c0001t0030	a0001c0001t0001g0051 a0001c0001t0002g0045 a0001c0001t0002g0072 others(5): Show a0001c0001t0001g0051 a0001c0001t0002g0045 a0001c0001t0002g0072 a0001c0001t0002g0118 a0001c0001t0003g0070 a0001c0001t0003g0125 a0001c0001t0015g0043 a0001c0001t0030g0028	8	184	0.0435	14	c.462 others(29): Show c.462-243_462-242insTGAGAGAGAGAGAG	SYN3	ENSG00000185666.16	transcript	ENST00000358763.7	protein_coding	4/13			chr22	TogoVar
SYN3_chr22_32502820_33063381	32956041	C C	CATATATA others(7): Show CATATATATATATAT	intron_variant intron_variant	MODIFIER	HG00673.hp1 HG00741.hp1 HG01069.hp1 others(14): Show HG00673.hp1 HG00741.hp1 HG01069.hp1 HG01070.hp1 HG01071.hp1 HG01071.hp2 HG01074.hp2 HG01106.hp2 HG01175.hp1 HG01358.hp2 HG01433.hp2 HG01496.hp2 HG01978.hp2 HG02258.hp1 HG02723.hp2 HG06807.hp2 NA19240.hp1	a0001 a0002 a0001 a0002	a0001c0001 a0001c0004 a0001c0007 others(1): Show a0001c0001 a0001c0004 a0001c0007 a0002c0002	a0001c0001t0002 a0001c0001t0003 a0001c0001t0006 others(9): Show a0001c0001t0002 a0001c0001t0003 a0001c0001t0006 a0001c0001t0010 a0001c0001t0013 a0001c0001t0026 a0001c0001t0029 a0001c0001t0032 a0001c0001t0076 a0001c0004t0017 a0001c0007t0080 a0002c0002t0004	a0001c0001t0002g0057 a0001c0001t0003g0128 a0001c0001t0003g0136 others(14): Show a0001c0001t0002g0057 a0001c0001t0003g0128 a0001c0001t0003g0136 a0001c0001t0003g0137 a0001c0001t0003g0151 a0001c0001t0006g0138 a0001c0001t0010g0183 a0001c0001t0013g0081 a0001c0001t0013g0121 a0001c0001t0013g0135 a0001c0001t0026g0026 a0001c0001t0029g0127 a0001c0001t0032g0150 a0001c0001t0076g0069 a0001c0004t0017g0055 a0001c0007t0080g0112 a0002c0002t0004g0111	17	184	0.0924	14	c.370 others(33): Show c.370-24574_370-24561dupATATATATATATAT	SYN3	ENSG00000185666.16	transcript	ENST00000358763.7	protein_coding	3/13			chr22	TogoVar
SYNCRIP_chr6_85608976_85647886	85623562	C C	CAAAAAAA others(7): Show CAAAAAAAAAAAAAA	intron_variant intron_variant	MODIFIER	HG02818.hp1 HG03209.hp1 HG02818.hp1 HG03209.hp1	a0001 a0003 a0001 a0003	a0001c0001 a0003c0003 a0001c0001 a0003c0003	a0001c0001t0001 a0003c0003t0001 a0001c0001t0001 a0003c0003t0001	a0001c0001t0001g0217 a0003c0003t0001g0218 a0001c0001t0001g0217 a0003c0003t0001g0218	2	364	0.0055	14	c.802 others(29): Show c.802+401_802+414dupTTTTTTTTTTTTTT	SYNCRIP	ENSG00000135316.20	transcript	ENST00000369622.8	protein_coding	7/10			chr6	TogoVar
SYNCRIP_chr6_85608976_85647886	85623562	C C	CCAAAAAA others(7): Show CCAAAAAAAAAAAAA	intron_variant intron_variant	MODIFIER	HG00423.hp2 HG02135.hp2 HG02622.hp1 others(14): Show HG00423.hp2 HG02135.hp2 HG02622.hp1 HG03831.hp1 NA18956.hp2 NA18959.hp1 NA18969.hp1 NA18979.hp1 NA18979.hp2 NA18988.hp2 NA18991.hp1 NA18995.hp1 NA19007.hp2 NA19009.hp1 NA19058.hp2 NA19088.hp2 NA19090.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0011 a0001c0001t0001g0021 a0001c0001t0001g0022 others(10): Show a0001c0001t0001g0011 a0001c0001t0001g0021 a0001c0001t0001g0022 a0001c0001t0001g0060 a0001c0001t0001g0062 a0001c0001t0001g0078 a0001c0001t0001g0084 a0001c0001t0001g0085 a0001c0001t0001g0091 a0001c0001t0001g0096 a0001c0001t0001g0110 a0001c0001t0001g0123 a0001c0001t0001g0130	17	364	0.0467	14	c.802 others(29): Show c.802+414_802+415insTTTTTTTTTTTTTG	SYNCRIP	ENSG00000135316.20	transcript	ENST00000369622.8	protein_coding	7/10			chr6	TogoVar
SYNCRIP_chr6_85608976_85647886	85631339	C C	CAAAAAAA others(7): Show CAAAAAAAAAAAAAA	intron_variant intron_variant	MODIFIER	HG01358.hp2 HG03017.hp2 HG03098.hp2 others(6): Show HG01358.hp2 HG03017.hp2 HG03098.hp2 HG03453.hp1 HG03654.hp2 HG03831.hp1 NA19004.hp2 NA19054.hp1 NA19056.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0067 a0001c0001t0001g0104 a0001c0001t0001g0105 others(6): Show a0001c0001t0001g0067 a0001c0001t0001g0104 a0001c0001t0001g0105 a0001c0001t0001g0106 a0001c0001t0001g0110 a0001c0001t0001g0116 a0001c0001t0001g0117 a0001c0001t0001g0120 a0001c0001t0001g0128	9	364	0.0247	14	c.666 others(31): Show c.666+5614_666+5627dupTTTTTTTTTTTTTT	SYNCRIP	ENSG00000135316.20	transcript	ENST00000369622.8	protein_coding	6/10			chr6	TogoVar
SYNC_chr1_32674906_32707770	32687855	A A	ATTATTAT others(7): Show ATTATTATTATTATT	intron_variant intron_variant	MODIFIER	HG02155.hp2 HG03710.hp2 HG04199.hp2 others(2): Show HG02155.hp2 HG03710.hp2 HG04199.hp2 NA19091.hp1 NA19240.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0002 a0001c0001t0026 a0001c0001t0001 a0001c0001t0002 a0001c0001t0026	a0001c0001t0001g0020 a0001c0001t0001g0144 a0001c0001t0002g0160 others(1): Show a0001c0001t0001g0020 a0001c0001t0001g0144 a0001c0001t0002g0160 a0001c0001t0026g0067	5	318	0.0157	14	c.123 others(33): Show c.1234-3474_1234-3473insAATAATAATAATAA	SYNC	ENSG00000162520.15	transcript	ENST00000409190.8	protein_coding	2/4			chr1	TogoVar
SYNC_chr1_32674906_32707770	32687858	A A	ATTATTAT others(7): Show ATTATTATTATTATT	intron_variant intron_variant	MODIFIER	NA18971.hp1 NA19004.hp1 NA19010.hp2 NA18971.hp1 NA19004.hp1 NA19010.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0077 a0001c0001t0001g0078 a0001c0001t0001g0109 a0001c0001t0001g0077 a0001c0001t0001g0078 a0001c0001t0001g0109	3	318	0.0094	14	c.123 others(33): Show c.1234-3477_1234-3476insAATAATAATAATAA	SYNC	ENSG00000162520.15	transcript	ENST00000409190.8	protein_coding	2/4			chr1	TogoVar
SYNDIG1L_chr14_74400899_74431210	74422653	T T	TCACACAC others(7): Show TCACACACACACACA	intron_variant intron_variant	MODIFIER	HG00140.hp1 HG00280.hp1 HG00558.hp1 others(31): Show HG00140.hp1 HG00280.hp1 HG00558.hp1 HG00738.hp2 HG01081.hp1 HG01109.hp2 HG01433.hp2 HG01496.hp1 HG01515.hp2 HG02109.hp1 HG02615.hp1 HG02647.hp1 HG02683.hp2 HG02698.hp1 HG02738.hp1 HG02886.hp2 HG02922.hp1 HG03130.hp1 HG03209.hp2 HG03490.hp1 HG03579.hp2 HG03669.hp1 HG03831.hp2 HG03834.hp1 NA18612.hp2 NA18952.hp2 NA18959.hp1 NA18964.hp1 NA18969.hp2 NA18971.hp1 NA18980.hp1 NA19000.hp1 NA19067.hp2 NA20752.hp2	a0001 a0002 a0004 a0001 a0002 a0004	a0001c0001 a0001c0002 a0002c0003 others(2): Show a0001c0001 a0001c0002 a0002c0003 a0002c0008 a0004c0006	a0001c0001t0001 a0001c0001t0004 a0001c0001t0011 others(6): Show a0001c0001t0001 a0001c0001t0004 a0001c0001t0011 a0001c0002t0002 a0001c0002t0003 a0001c0002t0006 a0002c0003t0025 a0002c0008t0003 a0004c0006t0026	a0001c0001t0001g0035 a0001c0001t0001g0066 a0001c0001t0001g0093 others(23): Show a0001c0001t0001g0035 a0001c0001t0001g0066 a0001c0001t0001g0093 a0001c0001t0001g0094 a0001c0001t0001g0247 a0001c0001t0004g0085 a0001c0001t0004g0086 a0001c0001t0004g0088 a0001c0001t0011g0246 a0001c0002t0002g0006 a0001c0002t0002g0036 a0001c0002t0002g0037 a0001c0002t0002g0084 a0001c0002t0002g0089 a0001c0002t0002g0090 a0001c0002t0002g0091 a0001c0002t0002g0092 a0001c0002t0002g0132 a0001c0002t0002g0144 a0001c0002t0002g0145 a0001c0002t0003g0248 a0001c0002t0003g0249 a0001c0002t0006g0068 a0002c0003t0025g0252 a0002c0008t0003g0087 a0004c0006t0026g0253	34	404	0.0842	14	c.-58 others(31): Show c.-58+3245_-58+3258dupTGTGTGTGTGTGTG	SYNDIG1L	ENSG00000183379.9	transcript	ENST00000331628.8	protein_coding	1/3			chr14	TogoVar
SYNDIG1_chr20_24464629_24671616	24467771	A A	ATGTGTGT others(7): Show ATGTGTGTGTGTGTG	upstream_gene_variant upstream_gene_variant	MODIFIER	HG00738.hp1 HG01169.hp1 HG00738.hp1 HG01169.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0242 a0001c0001t0001g0244 a0001c0001t0001g0242 a0001c0001t0001g0244	2	270	0.0074	14	c.-20 others(25): Show c.-2061_-2060insTGTGTGTGTGTGTG	SYNDIG1	ENSG00000101463.6	transcript	ENST00000376862.4	protein_coding		1857		chr20	TogoVar
SYNE1_chr6_152116687_152642362	152188984	A A	AAAAAATA others(7): Show AAAAAATATATATAT	intron_variant intron_variant	MODIFIER	HG03516.hp1 HG03516.hp1	a0095 a0095	a0095c0158 a0095c0158	a0095c0158t0015 a0095c0158t0015	a0095c0158t0015g0007 a0095c0158t0015g0007	1	174	0.0058	14	c.233 others(33): Show c.23301+267_23301+268insATATATATATTTTT	SYNE1	ENSG00000131018.25	transcript	ENST00000367255.10	protein_coding	128/145			chr6	TogoVar
SYNE1_chr6_152116687_152642362	152241500	C C	CTGTGTGT others(7): Show CTGTGTGTGTGTGTG	intron_variant intron_variant	MODIFIER	HG01496.hp1 HG01981.hp1 HG02622.hp2 others(3): Show HG01496.hp1 HG01981.hp1 HG02622.hp2 HG03540.hp2 NA18950.hp2 NA19066.hp1	a0007 a0050 a0065 others(3): Show a0007 a0050 a0065 a0096 a0105 a0120	a0007c0002 a0050c0147 a0065c0037 others(3): Show a0007c0002 a0050c0147 a0065c0037 a0096c0099 a0105c0160 a0120c0045	a0007c0002t0003 a0050c0147t0001 a0065c0037t0001 others(3): Show a0007c0002t0003 a0050c0147t0001 a0065c0037t0001 a0096c0099t0003 a0105c0160t0010 a0120c0045t0007	a0007c0002t0003g0081 a0050c0147t0001g0045 a0065c0037t0001g0119 others(3): Show a0007c0002t0003g0081 a0050c0147t0001g0045 a0065c0037t0001g0119 a0096c0099t0003g0097 a0105c0160t0010g0135 a0120c0045t0007g0161	6	174	0.0345	14	c.198 others(33): Show c.19893+726_19893+739dupCACACACACACACA	SYNE1	ENSG00000131018.25	transcript	ENST00000367255.10	protein_coding	107/145			chr6	TogoVar
SYNE1_chr6_152116687_152642362	152241527	T T	TGTGTGTG others(7): Show TGTGTGTGTGTGTGA	intron_variant intron_variant	MODIFIER	HG02129.hp1 HG02965.hp1 HG03225.hp1 others(2): Show HG02129.hp1 HG02965.hp1 HG03225.hp1 HG03453.hp1 homoSapiens_chm13v2.hp1	a0002 a0020 a0088 others(2): Show a0002 a0020 a0088 a0090 a0128	a0002c0057 a0020c0072 a0088c0142 others(2): Show a0002c0057 a0020c0072 a0088c0142 a0090c0106 a0128c0161	a0002c0057t0005 a0020c0072t0001 a0088c0142t0001 others(2): Show a0002c0057t0005 a0020c0072t0001 a0088c0142t0001 a0090c0106t0004 a0128c0161t0001	a0002c0057t0005g0100 a0020c0072t0001g0086 a0088c0142t0001g0114 others(2): Show a0002c0057t0005g0100 a0020c0072t0001g0086 a0088c0142t0001g0114 a0090c0106t0004g0013 a0128c0161t0001g0075	5	174	0.0287	14	c.198 others(33): Show c.19893+712_19893+713insTCACACACACACAC	SYNE1	ENSG00000131018.25	transcript	ENST00000367255.10	protein_coding	107/145			chr6	TogoVar
SYNE1_chr6_152116687_152642362	152247750	T T	TATATACA others(7): Show TATATACACACACAC	intron_variant intron_variant	MODIFIER	HG02257.hp2 HG02257.hp2	a0057 a0057	a0057c0071 a0057c0071	a0057c0071t0002 a0057c0071t0002	a0057c0071t0002g0015 a0057c0071t0002g0015	1	174	0.0058	14	c.195 others(35): Show c.19572+1410_19572+1411insGTGTGTGTGTATAT	SYNE1	ENSG00000131018.25	transcript	ENST00000367255.10	protein_coding	105/145			chr6	TogoVar
SYNE1_chr6_152116687_152642362	152247855	A A	AACACACA others(7): Show AACACACACACACAC	intron_variant intron_variant	MODIFIER	HG02976.hp2 HG02976.hp2	a0080 a0080	a0080c0166 a0080c0166	a0080c0166t0002 a0080c0166t0002	a0080c0166t0002g0055 a0080c0166t0002g0055	1	174	0.0058	14	c.195 others(35): Show c.19572+1292_19572+1305dupGTGTGTGTGTGTGT	SYNE1	ENSG00000131018.25	transcript	ENST00000367255.10	protein_coding	105/145			chr6	TogoVar
SYNE1_chr6_152116687_152642362	152465760	A A	AACACACA others(7): Show AACACACACACACAC	intron_variant intron_variant	MODIFIER	HG01261.hp1 HG02572.hp2 HG03098.hp2 others(1): Show HG01261.hp1 HG02572.hp2 HG03098.hp2 HG03492.hp2	a0005 a0006 a0063 others(1): Show a0005 a0006 a0063 a0083	a0005c0020 a0006c0022 a0063c0039 others(1): Show a0005c0020 a0006c0022 a0063c0039 a0083c0035	a0005c0020t0003 a0006c0022t0005 a0063c0039t0002 others(1): Show a0005c0020t0003 a0006c0022t0005 a0063c0039t0002 a0083c0035t0002	a0005c0020t0003g0082 a0006c0022t0005g0038 a0063c0039t0002g0025 others(1): Show a0005c0020t0003g0082 a0006c0022t0005g0038 a0063c0039t0002g0025 a0083c0035t0002g0091	4	174	0.0230	14	c.172 others(31): Show c.1729+221_1729+222insGTGTGTGTGTGTGT	SYNE1	ENSG00000131018.25	transcript	ENST00000367255.10	protein_coding	17/145			chr6	TogoVar
SYNE1_chr6_152116687_152642362	152484038	C C	CAAAAAAA others(7): Show CAAAAAAAAAAAAAA	intron_variant intron_variant	MODIFIER	HG01106.hp1 HG01106.hp1	a0002 a0002	a0002c0063 a0002c0063	a0002c0063t0002 a0002c0063t0002	a0002c0063t0002g0079 a0002c0063t0002g0079	1	174	0.0058	14	c.118 others(31): Show c.1185+783_1186-790dupTTTTTTTTTTTTTT	SYNE1	ENSG00000131018.25	transcript	ENST00000367255.10	protein_coding	13/145			chr6	TogoVar
SYNE1_chr6_152116687_152642362	152605033	A A	AGAGAGGG others(7): Show AGAGAGGGAGGGAGG	intron_variant intron_variant	MODIFIER	NA20905.hp2 NA20905.hp2	a0024 a0024	a0024c0003 a0024c0003	a0024c0003t0004 a0024c0003t0004	a0024c0003t0004g0032 a0024c0003t0004g0032	1	174	0.0058	14	c.67+ others(31): Show c.67+23231_67+23232insCCTCCCTCCCTCTC	SYNE1	ENSG00000131018.25	transcript	ENST00000367255.10	protein_coding	3/145			chr6	TogoVar
SYNE2_chr14_63848004_64231433	63919972	G G	GTTTTTTT others(7): Show GTTTTTTTTTTTTTT	intron_variant intron_variant	MODIFIER	HG01074.hp1 HG02145.hp1 HG02572.hp1 HG01074.hp1 HG02145.hp1 HG02572.hp1	a0014 a0039 a0014 a0039	a0014c0070 a0014c0071 a0039c0075 a0014c0070 a0014c0071 a0039c0075	a0014c0070t0001 a0014c0071t0001 a0039c0075t0001 a0014c0070t0001 a0014c0071t0001 a0039c0075t0001	a0014c0070t0001g0092 a0014c0071t0001g0129 a0039c0075t0001g0130 a0014c0070t0001g0092 a0014c0071t0001g0129 a0039c0075t0001g0130	3	150	0.0200	14	c.79+ others(31): Show c.79+10751_79+10764dupTTTTTTTTTTTTTT	SYNE2	ENSG00000054654.20	transcript	ENST00000555002.6	protein_coding	2/115		INFO_REALIGN_3_PRIME	chr14	TogoVar
SYNE2_chr14_63848004_64231433	63924832	G G	GTTTTTTT others(7): Show GTTTTTTTTTTTTTT	intron_variant intron_variant	MODIFIER	HG03492.hp1 NA19007.hp2 homoSapiens_chm13v2.hp1 HG03492.hp1 NA19007.hp2 homoSapiens_chm13v2.hp1	a0002 a0054 a0075 a0002 a0054 a0075	a0002c0001 a0054c0067 a0075c0083 a0002c0001 a0054c0067 a0075c0083	a0002c0001t0001 a0054c0067t0002 a0075c0083t0002 a0002c0001t0001 a0054c0067t0002 a0075c0083t0002	a0002c0001t0001g0111 a0054c0067t0002g0107 a0075c0083t0002g0035 a0002c0001t0001g0111 a0054c0067t0002g0107 a0075c0083t0002g0035	3	150	0.0200	14	c.79+ others(31): Show c.79+15606_79+15607insTTTTTTTTTTTTTT	SYNE2	ENSG00000054654.20	transcript	ENST00000555002.6	protein_coding	2/115		INFO_REALIGN_3_PRIME	chr14	TogoVar
SYNE2_chr14_63848004_64231433	63938948	G G	GTGCATGT others(7): Show GTGCATGTGTGCGCT	intron_variant intron_variant	MODIFIER	HG00423.hp1 HG00741.hp1 HG01109.hp2 others(39): Show HG00423.hp1 HG00741.hp1 HG01109.hp2 HG01496.hp2 HG01516.hp1 HG02071.hp1 HG02109.hp1 HG02109.hp2 HG02145.hp2 HG02257.hp2 HG02280.hp1 HG02280.hp2 HG02523.hp2 HG02572.hp2 HG02886.hp1 HG02965.hp2 HG02970.hp1 HG02970.hp2 HG03041.hp1 HG03041.hp2 HG03098.hp2 HG03195.hp2 HG03209.hp1 HG03209.hp2 HG03471.hp2 HG03490.hp2 HG03492.hp2 HG03516.hp1 HG03710.hp2 HG04184.hp1 NA18747.hp1 NA18906.hp2 NA18949.hp2 NA18969.hp1 NA18970.hp2 NA18980.hp1 NA19007.hp1 NA19010.hp1 NA19043.hp1 NA19086.hp1 NA19240.hp2 NA20905.hp2	a0003 a0005 a0007 others(18): Show a0003 a0005 a0007 a0010 a0011 a0012 a0015 a0017 a0020 a0026 a0031 a0035 a0037 a0040 a0041 a0047 a0049 a0052 a0061 a0062 a0068	a0003c0002 a0003c0015 a0003c0034 others(22): Show a0003c0002 a0003c0015 a0003c0034 a0003c0035 a0005c0013 a0007c0007 a0010c0006 a0011c0017 a0011c0043 a0012c0008 a0015c0016 a0017c0012 a0020c0024 a0026c0037 a0031c0038 a0035c0036 a0037c0023 a0040c0029 a0041c0039 a0047c0027 a0049c0026 a0052c0040 a0061c0033 a0062c0025 a0068c0028	a0003c0002t0001 a0003c0002t0006 a0003c0002t0011 others(25): Show a0003c0002t0001 a0003c0002t0006 a0003c0002t0011 a0003c0015t0003 a0003c0034t0001 a0003c0035t0003 a0005c0013t0001 a0007c0007t0001 a0010c0006t0006 a0011c0017t0002 a0011c0043t0001 a0012c0008t0002 a0015c0016t0001 a0015c0016t0005 a0017c0012t0001 a0020c0024t0001 a0026c0037t0001 a0031c0038t0003 a0035c0036t0001 a0037c0023t0001 a0040c0029t0002 a0041c0039t0004 a0047c0027t0001 a0049c0026t0003 a0052c0040t0007 a0061c0033t0003 a0062c0025t0003 a0068c0028t0003	a0003c0002t0001g0005 a0003c0002t0001g0006 a0003c0002t0001g0010 others(39): Show a0003c0002t0001g0005 a0003c0002t0001g0006 a0003c0002t0001g0010 a0003c0002t0001g0091 a0003c0002t0001g0094 a0003c0002t0006g0093 a0003c0002t0011g0009 a0003c0015t0003g0011 a0003c0015t0003g0012 a0003c0034t0001g0015 a0003c0035t0003g0070 a0005c0013t0001g0138 a0005c0013t0001g0139 a0007c0007t0001g0143 a0007c0007t0001g0144 a0007c0007t0001g0145 a0010c0006t0006g0037 a0010c0006t0006g0039 a0010c0006t0006g0058 a0011c0017t0002g0025 a0011c0017t0002g0088 a0011c0043t0001g0089 a0012c0008t0002g0007 a0012c0008t0002g0064 a0012c0008t0002g0095 a0015c0016t0001g0149 a0015c0016t0005g0148 a0017c0012t0001g0073 a0017c0012t0001g0097 a0020c0024t0001g0146 a0026c0037t0001g0013 a0031c0038t0003g0028 a0035c0036t0001g0001 a0037c0023t0001g0040 a0040c0029t0002g0086 a0041c0039t0004g0067 a0047c0027t0001g0083 a0049c0026t0003g0074 a0052c0040t0007g0150 a0061c0033t0003g0075 a0062c0025t0003g0084 a0068c0028t0003g0023	42	150	0.2800	14	c.80- others(29): Show c.80-1654_80-1641dupGCTTGCATGTGTGC	SYNE2	ENSG00000054654.20	transcript	ENST00000555002.6	protein_coding	2/115		INFO_REALIGN_3_PRIME	chr14	TogoVar
SYNE2_chr14_63848004_64231433	63944278	T T	TTATATAT others(7): Show TTATATATATATATA	intron_variant intron_variant	MODIFIER	HG02809.hp1 HG02809.hp1	a0008 a0008	a0008c0011 a0008c0011	a0008c0011t0004 a0008c0011t0004	a0008c0011t0004g0055 a0008c0011t0004g0055	1	150	0.0067	14	c.408 others(31): Show c.408+2152_408+2165dupTATATATATATATA	SYNE2	ENSG00000054654.20	transcript	ENST00000555002.6	protein_coding	6/115		INFO_REALIGN_3_PRIME	chr14	TogoVar
SYNE2_chr14_63848004_64231433	63944824	C C	CTTTTTTT others(7): Show CTTTTTTTTTTTTTT	intron_variant intron_variant	MODIFIER	HG02109.hp2 HG02886.hp1 HG03041.hp1 HG02109.hp2 HG02886.hp1 HG03041.hp1	a0007 a0020 a0007 a0020	a0007c0007 a0020c0024 a0007c0007 a0020c0024	a0007c0007t0001 a0020c0024t0001 a0007c0007t0001 a0020c0024t0001	a0007c0007t0001g0144 a0007c0007t0001g0145 a0020c0024t0001g0146 a0007c0007t0001g0144 a0007c0007t0001g0145 a0020c0024t0001g0146	3	150	0.0200	14	c.408 others(31): Show c.408+2693_408+2706dupTTTTTTTTTTTTTT	SYNE2	ENSG00000054654.20	transcript	ENST00000555002.6	protein_coding	6/115		INFO_REALIGN_3_PRIME	chr14	TogoVar
SYNE2_chr14_63848004_64231433	63948156	G G	GACACACA others(7): Show GACACACACACATAC	intron_variant intron_variant	MODIFIER	HG02071.hp1 HG02071.hp1	a0035 a0035	a0035c0036 a0035c0036	a0035c0036t0001 a0035c0036t0001	a0035c0036t0001g0001 a0035c0036t0001g0001	1	150	0.0067	14	c.409 others(31): Show c.409-1660_409-1659insCATACACACACACA	SYNE2	ENSG00000054654.20	transcript	ENST00000555002.6	protein_coding	6/115		INFO_REALIGN_3_PRIME	chr14	TogoVar
SYNE2_chr14_63848004_64231433	63974886	G G	GTATATAT others(7): Show GTATATATATATATA	intron_variant intron_variant	MODIFIER	HG00609.hp1 NA19065.hp2 HG00609.hp1 NA19065.hp2	a0002 a0069 a0002 a0069	a0002c0001 a0069c0076 a0002c0001 a0069c0076	a0002c0001t0002 a0069c0076t0002 a0002c0001t0002 a0069c0076t0002	a0002c0001t0002g0122 a0069c0076t0002g0125 a0002c0001t0002g0122 a0069c0076t0002g0125	2	150	0.0133	14	c.112 others(33): Show c.1129-1676_1129-1675insATATATATATATAT	SYNE2	ENSG00000054654.20	transcript	ENST00000555002.6	protein_coding	11/115		INFO_REALIGN_3_PRIME	chr14	TogoVar
SYNE2_chr14_63848004_64231433	63974888	G G	GTATATAT others(7): Show GTATATATATATATA	intron_variant intron_variant	MODIFIER	HG01257.hp2 NA19010.hp2 HG01257.hp2 NA19010.hp2	a0001 a0001	a0001c0004 a0001c0019 a0001c0004 a0001c0019	a0001c0004t0004 a0001c0019t0004 a0001c0004t0004 a0001c0019t0004	a0001c0004t0004g0105 a0001c0019t0004g0137 a0001c0004t0004g0105 a0001c0019t0004g0137	2	150	0.0133	14	c.112 others(33): Show c.1129-1674_1129-1673insATATATATATATAT	SYNE2	ENSG00000054654.20	transcript	ENST00000555002.6	protein_coding	11/115		INFO_REALIGN_3_PRIME	chr14	TogoVar
SYNE2_chr14_63848004_64231433	63974890	G G	GTATATAT others(7): Show GTATATATATATATA	intron_variant intron_variant	MODIFIER	HG01993.hp1 HG02132.hp2 HG01993.hp1 HG02132.hp2	a0001 a0001	a0001c0004 a0001c0019 a0001c0004 a0001c0019	a0001c0004t0004 a0001c0019t0004 a0001c0004t0004 a0001c0019t0004	a0001c0004t0004g0127 a0001c0019t0004g0119 a0001c0004t0004g0127 a0001c0019t0004g0119	2	150	0.0133	14	c.112 others(33): Show c.1129-1672_1129-1671insATATATATATATAT	SYNE2	ENSG00000054654.20	transcript	ENST00000555002.6	protein_coding	11/115		INFO_REALIGN_3_PRIME	chr14	TogoVar
SYNE2_chr14_63848004_64231433	63974892	G G	GTATATAT others(7): Show GTATATATATATATA	intron_variant intron_variant	MODIFIER	NA20129.hp2 NA20129.hp2	a0001 a0001	a0001c0004 a0001c0004	a0001c0004t0003 a0001c0004t0003	a0001c0004t0003g0132 a0001c0004t0003g0132	1	150	0.0067	14	c.112 others(33): Show c.1129-1659_1129-1646dupATATATATATATAT	SYNE2	ENSG00000054654.20	transcript	ENST00000555002.6	protein_coding	11/115		INFO_REALIGN_3_PRIME	chr14	TogoVar
SYNE2_chr14_63848004_64231433	64151483	A A	AAAAAAAA others(7): Show AAAAAAAAAAAAAAG	intron_variant intron_variant	MODIFIER	HG03041.hp2 HG03041.hp2	a0010 a0010	a0010c0006 a0010c0006	a0010c0006t0006 a0010c0006t0006	a0010c0006t0006g0037 a0010c0006t0006g0037	1	150	0.0067	14	c.156 others(35): Show c.15640-1081_15640-1080insAAAAAAAAAAAAAG	SYNE2	ENSG00000054654.20	transcript	ENST00000555002.6	protein_coding	84/115			chr14	TogoVar
SYNE2_chr14_63848004_64231433	64184329	G G	GGTGTGTG others(7): Show GGTGTGTGTGTGTGT	intron_variant intron_variant	MODIFIER	HG00741.hp2 HG02132.hp2 HG02523.hp1 others(1): Show HG00741.hp2 HG02132.hp2 HG02523.hp1 NA18994.hp2	a0001 a0006 a0001 a0006	a0001c0004 a0001c0009 a0006c0010 a0001c0004 a0001c0009 a0006c0010	a0001c0004t0004 a0001c0009t0003 a0006c0010t0004 a0001c0004t0004 a0001c0009t0003 a0006c0010t0004	a0001c0004t0004g0127 a0001c0009t0003g0131 a0006c0010t0004g0080 others(1): Show a0001c0004t0004g0127 a0001c0009t0003g0131 a0006c0010t0004g0080 a0006c0010t0004g0113	4	150	0.0267	14	c.175 others(35): Show c.17557-2074_17557-2061dupGTGTGTGTGTGTGT	SYNE2	ENSG00000054654.20	transcript	ENST00000555002.6	protein_coding	96/115		INFO_REALIGN_3_PRIME	chr14	TogoVar
SYNE2_chr14_63848004_64231433	64226698	C C	CTTTTTTT others(7): Show CTTTTTTTTTTTTTT	downstream_gene_variant downstream_gene_variant	MODIFIER	HG01516.hp1 HG02145.hp2 HG02897.hp2 others(4): Show HG01516.hp1 HG02145.hp2 HG02897.hp2 HG02965.hp1 HG02970.hp1 HG03041.hp2 HG03516.hp1	a0003 a0009 a0010 others(1): Show a0003 a0009 a0010 a0019	a0003c0002 a0009c0078 a0010c0006 others(1): Show a0003c0002 a0009c0078 a0010c0006 a0019c0032	a0003c0002t0001 a0003c0002t0006 a0009c0078t0001 others(2): Show a0003c0002t0001 a0003c0002t0006 a0009c0078t0001 a0010c0006t0006 a0019c0032t0001	a0003c0002t0001g0005 a0003c0002t0006g0093 a0009c0078t0001g0085 others(4): Show a0003c0002t0001g0005 a0003c0002t0006g0093 a0009c0078t0001g0085 a0010c0006t0006g0037 a0010c0006t0006g0039 a0010c0006t0006g0058 a0019c0032t0001g0103	7	150	0.0467	14	c.11 others(25): Show c.1172_*1173insTTTTTTTTTTTTTT	SYNE2	ENSG00000054654.20	transcript	ENST00000555002.6	protein_coding		266		chr14	TogoVar
SYNE3_chr14_95402266_95521650	95479224	C C	CAAAAAAA others(7): Show CAAAAAAAAAAAAAA	intron_variant intron_variant	MODIFIER	NA18943.hp1 NA18943.hp1	a0003 a0003	a0003c0006 a0003c0006	a0003c0006t0131 a0003c0006t0131	a0003c0006t0131g0296 a0003c0006t0131g0296	1	384	0.0026	14	c.-14 others(31): Show c.-14-3403_-14-3390dupTTTTTTTTTTTTTT	SYNE3	ENSG00000176438.13	transcript	ENST00000682763.1	protein_coding	1/17			chr14	TogoVar
SYNE3_chr14_95402266_95521650	95499856	C C	CTTTTTTT others(7): Show CTTTTTTTTTTTTTT	intron_variant intron_variant	MODIFIER	HG00621.hp2 NA18939.hp2 NA18941.hp1 others(3): Show HG00621.hp2 NA18939.hp2 NA18941.hp1 NA18952.hp2 NA18995.hp2 NA19060.hp1	a0001 a0002 a0003 others(1): Show a0001 a0002 a0003 a0004	a0001c0018 a0002c0002 a0003c0019 others(1): Show a0001c0018 a0002c0002 a0003c0019 a0004c0003	a0001c0018t0100 a0002c0002t0003 a0003c0019t0010 others(3): Show a0001c0018t0100 a0002c0002t0003 a0003c0019t0010 a0004c0003t0004 a0004c0003t0013 a0004c0003t0099	a0001c0018t0100g0302 a0002c0002t0003g0019 a0003c0019t0010g0234 others(3): Show a0001c0018t0100g0302 a0002c0002t0003g0019 a0003c0019t0010g0234 a0004c0003t0004g0064 a0004c0003t0013g0179 a0004c0003t0099g0178	6	384	0.0156	14	c.-15 others(33): Show c.-15+16726_-15+16739dupAAAAAAAAAAAAAA	SYNE3	ENSG00000176438.13	transcript	ENST00000682763.1	protein_coding	1/17			chr14	TogoVar
SYNE3_chr14_95402266_95521650	95513737	T T	TTATATAT others(7): Show TTATATATATATATA	intron_variant intron_variant	MODIFIER	HG00323.hp2 HG01099.hp1 HG01993.hp1 others(8): Show HG00323.hp2 HG01099.hp1 HG01993.hp1 HG02056.hp2 HG02818.hp2 HG03209.hp2 HG03579.hp2 HG03942.hp2 NA19002.hp1 NA19091.hp2 NA20752.hp2	a0001 a0002 a0003 others(3): Show a0001 a0002 a0003 a0005 a0007 a0027	a0001c0021 a0001c0022 a0002c0002 others(7): Show a0001c0021 a0001c0022 a0002c0002 a0002c0007 a0002c0014 a0002c0091 a0003c0004 a0005c0010 a0007c0020 a0027c0094	a0001c0021t0102 a0001c0022t0129 a0002c0002t0009 others(8): Show a0001c0021t0102 a0001c0022t0129 a0002c0002t0009 a0002c0002t0015 a0002c0007t0182 a0002c0014t0008 a0002c0091t0134 a0003c0004t0186 a0005c0010t0011 a0007c0020t0032 a0027c0094t0139	a0001c0021t0102g0090 a0001c0022t0129g0223 a0002c0002t0009g0345 others(8): Show a0001c0021t0102g0090 a0001c0022t0129g0223 a0002c0002t0009g0345 a0002c0002t0015g0183 a0002c0007t0182g0347 a0002c0014t0008g0193 a0002c0091t0134g0181 a0003c0004t0186g0344 a0005c0010t0011g0182 a0007c0020t0032g0047 a0027c0094t0139g0346	11	384	0.0287	14	c.-15 others(31): Show c.-15+2845_-15+2858dupTATATATATATATA	SYNE3	ENSG00000176438.13	transcript	ENST00000682763.1	protein_coding	1/17			chr14	TogoVar
SYNE3_chr14_95402266_95521650	95520967	G G	GTATATAT others(7): Show GTATATATATATATA	upstream_gene_variant upstream_gene_variant	MODIFIER	NA18960.hp2 NA18960.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0155 a0001c0001t0155	a0001c0001t0155g0219 a0001c0001t0155g0219	1	384	0.0026	14	c.-43 others(25): Show c.-4387_-4386insTATATATATATATA	SYNE3	ENSG00000176438.13	transcript	ENST00000682763.1	protein_coding		4318		chr14	TogoVar
SYNE3_chr14_95402266_95521650	95521002	T T	TATATATA others(7): Show TATATATATATATAC	upstream_gene_variant upstream_gene_variant	MODIFIER	HG02559.hp1 HG02559.hp1	a0010 a0010	a0010c0024 a0010c0024	a0010c0024t0172 a0010c0024t0172	a0010c0024t0172g0081 a0010c0024t0172g0081	1	384	0.0026	14	c.-44 others(25): Show c.-4422_-4421insGTATATATATATAT	SYNE3	ENSG00000176438.13	transcript	ENST00000682763.1	protein_coding		4353		chr14	TogoVar
SYNGR1_chr22_39344991_39390575	39365988	C C	CTTTTTTT others(7): Show CTTTTTTTTTTTTTT	intron_variant intron_variant	MODIFIER	HG00323.hp1 HG00544.hp1 HG00558.hp1 others(59): Show HG00323.hp1 HG00544.hp1 HG00558.hp1 HG00558.hp2 HG00597.hp1 HG00597.hp2 HG00621.hp1 HG00735.hp2 HG01069.hp1 HG01071.hp2 HG01074.hp1 HG01099.hp1 HG01255.hp2 HG01517.hp2 HG01928.hp1 HG01928.hp2 HG01943.hp1 HG01943.hp2 HG01952.hp1 HG01952.hp2 HG01975.hp1 HG01975.hp2 HG02015.hp1 HG02015.hp2 HG02056.hp2 HG02135.hp1 HG02135.hp2 HG02148.hp2 HG02155.hp1 HG02698.hp2 HG03654.hp1 HG03688.hp1 HG03927.hp1 HG03927.hp2 HG04115.hp1 HG04184.hp1 HG04199.hp1 HG04228.hp2 NA18522.hp1 NA18747.hp1 NA18747.hp2 NA18939.hp1 NA18939.hp2 NA18945.hp1 NA18947.hp1 NA18947.hp2 NA18959.hp1 NA18959.hp2 NA18979.hp1 NA18981.hp1 NA18981.hp2 NA18994.hp2 NA19002.hp1 NA19007.hp1 NA19007.hp2 NA19057.hp1 NA19060.hp1 NA19060.hp2 NA19068.hp1 NA19085.hp2 NA19091.hp1 NA19091.hp2	a0001 a0001	a0001c0001 a0001c0003 a0001c0007 a0001c0001 a0001c0003 a0001c0007	a0001c0001t0001 a0001c0001t0009 a0001c0001t0012 others(4): Show a0001c0001t0001 a0001c0001t0009 a0001c0001t0012 a0001c0001t0018 a0001c0003t0001 a0001c0003t0010 a0001c0007t0018	a0001c0001t0001g0001 a0001c0001t0001g0005 a0001c0001t0001g0006 others(52): Show a0001c0001t0001g0001 a0001c0001t0001g0005 a0001c0001t0001g0006 a0001c0001t0001g0007 a0001c0001t0001g0008 a0001c0001t0001g0009 a0001c0001t0001g0010 a0001c0001t0001g0019 a0001c0001t0001g0023 a0001c0001t0001g0030 a0001c0001t0001g0031 a0001c0001t0001g0035 a0001c0001t0001g0036 a0001c0001t0001g0039 a0001c0001t0001g0040 a0001c0001t0001g0042 a0001c0001t0001g0045 a0001c0001t0001g0046 a0001c0001t0001g0051 a0001c0001t0001g0052 a0001c0001t0001g0053 a0001c0001t0001g0054 a0001c0001t0001g0055 a0001c0001t0001g0074 a0001c0001t0001g0077 a0001c0001t0001g0078 a0001c0001t0001g0079 a0001c0001t0001g0087 a0001c0001t0001g0088 a0001c0001t0001g0089 a0001c0001t0001g0091 a0001c0001t0001g0096 a0001c0001t0001g0099 a0001c0001t0001g0100 a0001c0001t0001g0105 a0001c0001t0001g0110 a0001c0001t0001g0111 a0001c0001t0001g0126 a0001c0001t0001g0134 a0001c0001t0001g0149 a0001c0001t0001g0206 a0001c0001t0001g0232 a0001c0001t0001g0233 a0001c0001t0001g0235 a0001c0001t0001g0236 a0001c0001t0001g0240 a0001c0001t0001g0241 a0001c0001t0001g0244 a0001c0001t0001g0262 a0001c0001t0009g0075 a0001c0001t0012g0001 a0001c0001t0018g0007 a0001c0003t0001g0214 a0001c0003t0010g0215 a0001c0007t0018g0076	62	300	0.2067	14	c.100 others(31): Show c.100-8314_100-8301dupTTTTTTTTTTTTTT	SYNGR1	ENSG00000100321.15	transcript	ENST00000328933.10	protein_coding	1/3		INFO_REALIGN_3_PRIME	chr22	TogoVar
SYNJ2_chr6_157976863_158104176	157989427	A A	AATATATA others(7): Show AATATATATATATAT	intron_variant intron_variant	MODIFIER	NA19001.hp2 NA19001.hp2	a0001 a0001	a0001c0007 a0001c0007	a0001c0007t0001 a0001c0007t0001	a0001c0007t0001g0199 a0001c0007t0001g0199	1	312	0.0032	14	c.127 others(31): Show c.127+7366_127+7379dupATATATATATATAT	SYNJ2	ENSG00000078269.15	transcript	ENST00000355585.9	protein_coding	1/26		INFO_REALIGN_3_PRIME	chr6	TogoVar

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