Joint Open Genome and Omics Platform (JoGo)

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Snpeff annotation impact detail

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regionname	pos	ref	alt	annotation	impact	samples	ahapids	chapids	thapids	thapids	ac	an	af	len	hgvs_c	genename	geneid	featuretype	featureid	transcript_biotype	rank	distance	status	chr	external
SYNJ2_chr6_157976863_158104176	158020403	C C	CGTGTGAC others(7): Show CGTGTGACCCCACCT	intron_variant intron_variant	MODIFIER	HG00099.hp2 HG00140.hp1 HG00280.hp2 others(153): Show HG00099.hp2 HG00140.hp1 HG00280.hp2 HG00408.hp2 HG00438.hp1 HG00558.hp2 HG00639.hp2 HG00642.hp2 HG00741.hp1 HG00741.hp2 HG01069.hp2 HG01071.hp1 HG01074.hp2 HG01109.hp1 HG01109.hp2 HG01168.hp2 HG01169.hp1 HG01169.hp2 HG01175.hp2 HG01192.hp1 HG01243.hp1 HG01243.hp2 HG01257.hp1 HG01258.hp2 HG01346.hp1 HG01346.hp2 HG01358.hp1 HG01361.hp1 HG01496.hp1 HG01496.hp2 HG01515.hp1 HG01517.hp2 HG01884.hp1 HG01891.hp1 HG01891.hp2 HG01978.hp2 HG02015.hp1 HG02027.hp1 HG02040.hp2 HG02055.hp1 HG02055.hp2 HG02071.hp1 HG02074.hp1 HG02080.hp1 HG02083.hp1 HG02109.hp1 HG02109.hp2 HG02145.hp1 HG02145.hp2 HG02155.hp1 HG02451.hp1 HG02486.hp1 HG02486.hp2 HG02523.hp1 HG02559.hp1 HG02559.hp2 HG02615.hp1 HG02615.hp2 HG02622.hp2 HG02630.hp1 HG02630.hp2 HG02647.hp1 HG02647.hp2 HG02698.hp1 HG02717.hp1 HG02717.hp2 HG02723.hp2 HG02735.hp2 HG02738.hp2 HG02809.hp1 HG02809.hp2 HG02818.hp1 HG02886.hp1 HG02886.hp2 HG02895.hp1 HG02897.hp1 HG02922.hp1 HG02965.hp1 HG02965.hp2 HG02970.hp2 HG02976.hp1 HG03017.hp2 HG03041.hp1 HG03098.hp1 HG03098.hp2 HG03130.hp1 HG03139.hp1 HG03139.hp2 HG03195.hp1 HG03209.hp1 HG03225.hp1 HG03225.hp2 HG03453.hp2 HG03471.hp2 HG03486.hp1 HG03491.hp2 HG03492.hp2 HG03579.hp1 HG03579.hp2 HG03669.hp2 HG03688.hp1 HG03704.hp2 HG03710.hp1 HG03710.hp2 HG03831.hp1 HG03831.hp2 HG03834.hp1 HG03927.hp1 HG04199.hp1 HG04204.hp2 HG06807.hp2 NA18522.hp2 NA18612.hp1 NA18612.hp2 NA18747.hp1 NA18944.hp2 NA18947.hp2 NA18948.hp1 NA18951.hp1 NA18952.hp2 NA18953.hp1 NA18955.hp1 NA18957.hp1 NA18959.hp1 NA18964.hp1 NA18970.hp2 NA18980.hp2 NA18982.hp1 NA18985.hp1 NA18985.hp2 NA18986.hp2 NA18992.hp2 NA18998.hp2 NA19002.hp1 NA19004.hp2 NA19009.hp1 NA19012.hp2 NA19030.hp1 NA19030.hp2 NA19043.hp1 NA19058.hp2 NA19060.hp2 NA19065.hp2 NA19067.hp1 NA19067.hp2 NA19070.hp1 NA19079.hp1 NA19088.hp2 NA19090.hp1 NA19091.hp1 NA20129.hp1 NA20300.hp2 NA20752.hp2 NA20805.hp1 NA20805.hp2 homoSapiens_chm13v2.hp1	a0001 a0002 a0003 others(14): Show a0001 a0002 a0003 a0004 a0005 a0006 a0007 a0010 a0011 a0012 a0015 a0016 a0017 a0018 a0021 a0022 a0023	a0001c0001 a0001c0006 a0001c0007 others(35): Show a0001c0001 a0001c0006 a0001c0007 a0001c0011 a0001c0029 a0001c0030 a0001c0032 a0001c0049 a0001c0051 a0001c0052 a0001c0054 a0002c0002 a0002c0003 a0002c0004 a0002c0005 a0002c0012 a0002c0013 a0002c0026 a0002c0031 a0002c0033 a0002c0036 a0002c0042 a0003c0046 a0004c0008 a0004c0048 a0005c0028 a0006c0017 a0007c0027 a0010c0057 a0011c0056 a0012c0035 a0015c0025 a0016c0039 a0017c0021 a0018c0050 a0021c0044 a0022c0055 a0023c0022	a0001c0001t0001 a0001c0001t0002 a0001c0001t0013 others(51): Show a0001c0001t0001 a0001c0001t0002 a0001c0001t0013 a0001c0001t0014 a0001c0001t0017 a0001c0001t0031 a0001c0006t0010 a0001c0007t0001 a0001c0011t0001 a0001c0029t0001 a0001c0030t0017 a0001c0032t0002 a0001c0049t0013 a0001c0051t0001 a0001c0052t0001 a0001c0054t0001 a0002c0002t0003 a0002c0002t0008 a0002c0003t0004 a0002c0003t0005 a0002c0003t0006 a0002c0003t0007 a0002c0003t0011 a0002c0004t0005 a0002c0004t0007 a0002c0005t0003 a0002c0005t0004 a0002c0005t0006 a0002c0005t0012 a0002c0012t0026 a0002c0012t0027 a0002c0013t0004 a0002c0026t0003 a0002c0031t0028 a0002c0033t0005 a0002c0036t0006 a0002c0042t0025 a0003c0046t0001 a0004c0008t0005 a0004c0008t0007 a0004c0048t0005 a0005c0028t0002 a0006c0017t0003 a0007c0027t0016 a0010c0057t0003 a0011c0056t0016 a0012c0035t0003 a0015c0025t0002 a0016c0039t0003 a0017c0021t0014 a0018c0050t0001 a0021c0044t0002 a0022c0055t0003 a0023c0022t0003	a0001c0001t0001g0018 a0001c0001t0001g0029 a0001c0001t0001g0030 others(153): Show a0001c0001t0001g0018 a0001c0001t0001g0029 a0001c0001t0001g0030 a0001c0001t0001g0041 a0001c0001t0001g0054 a0001c0001t0001g0058 a0001c0001t0001g0066 a0001c0001t0001g0072 a0001c0001t0001g0121 a0001c0001t0001g0186 a0001c0001t0001g0187 a0001c0001t0001g0188 a0001c0001t0001g0190 a0001c0001t0001g0194 a0001c0001t0001g0195 a0001c0001t0001g0200 a0001c0001t0001g0203 a0001c0001t0001g0212 a0001c0001t0001g0221 a0001c0001t0001g0241 a0001c0001t0001g0254 a0001c0001t0001g0255 a0001c0001t0001g0257 a0001c0001t0001g0258 a0001c0001t0001g0262 a0001c0001t0001g0263 a0001c0001t0001g0276 a0001c0001t0001g0277 a0001c0001t0001g0280 a0001c0001t0001g0281 a0001c0001t0001g0282 a0001c0001t0001g0287 a0001c0001t0001g0288 a0001c0001t0001g0292 a0001c0001t0001g0300 a0001c0001t0002g0004 a0001c0001t0002g0005 a0001c0001t0002g0015 a0001c0001t0002g0027 a0001c0001t0002g0039 a0001c0001t0002g0040 a0001c0001t0002g0043 a0001c0001t0002g0110 a0001c0001t0002g0122 a0001c0001t0002g0131 a0001c0001t0002g0135 a0001c0001t0002g0165 a0001c0001t0002g0166 a0001c0001t0002g0170 a0001c0001t0002g0182 a0001c0001t0002g0191 a0001c0001t0002g0192 a0001c0001t0002g0193 a0001c0001t0002g0196 a0001c0001t0002g0197 a0001c0001t0002g0211 a0001c0001t0002g0219 a0001c0001t0002g0230 a0001c0001t0002g0231 a0001c0001t0002g0232 a0001c0001t0002g0236 a0001c0001t0002g0246 a0001c0001t0002g0256 a0001c0001t0002g0278 a0001c0001t0002g0294 a0001c0001t0002g0295 a0001c0001t0002g0302 a0001c0001t0002g0306 a0001c0001t0002g0309 a0001c0001t0013g0152 a0001c0001t0014g0274 a0001c0001t0014g0275 a0001c0001t0017g0028 a0001c0001t0031g0201 a0001c0006t0010g0012 a0001c0006t0010g0014 a0001c0007t0001g0303 a0001c0011t0001g0006 a0001c0011t0001g0247 a0001c0029t0001g0167 a0001c0030t0017g0044 a0001c0032t0002g0293 a0001c0049t0013g0268 a0001c0051t0001g0017 a0001c0052t0001g0272 a0001c0054t0001g0013 a0002c0002t0003g0033 a0002c0002t0003g0059 a0002c0002t0003g0171 a0002c0002t0003g0184 a0002c0002t0003g0206 a0002c0002t0003g0285 a0002c0002t0003g0296 a0002c0002t0003g0298 a0002c0002t0003g0304 a0002c0002t0008g0284 a0002c0003t0004g0038 a0002c0003t0004g0061 a0002c0003t0004g0094 a0002c0003t0004g0095 a0002c0003t0004g0145 a0002c0003t0004g0289 a0002c0003t0004g0308 a0002c0003t0004g0311 a0002c0003t0004g0312 a0002c0003t0005g0243 a0002c0003t0005g0245 a0002c0003t0006g0064 a0002c0003t0006g0065 a0002c0003t0006g0117 a0002c0003t0006g0168 a0002c0003t0006g0222 a0002c0003t0006g0223 a0002c0003t0006g0225 a0002c0003t0007g0069 a0002c0003t0007g0233 a0002c0003t0007g0286 a0002c0003t0007g0290 a0002c0003t0011g0037 a0002c0003t0011g0144 a0002c0004t0005g0267 a0002c0004t0007g0248 a0002c0005t0003g0265 a0002c0005t0004g0055 a0002c0005t0006g0240 a0002c0005t0012g0089 a0002c0005t0012g0297 a0002c0012t0026g0035 a0002c0012t0027g0160 a0002c0013t0004g0068 a0002c0013t0004g0082 a0002c0026t0003g0279 a0002c0031t0028g0169 a0002c0033t0005g0158 a0002c0036t0006g0118 a0002c0042t0025g0034 a0003c0046t0001g0019 a0004c0008t0005g0016 a0004c0008t0005g0021 a0004c0008t0005g0259 a0004c0008t0007g0022 a0004c0048t0005g0020 a0005c0028t0002g0208 a0006c0017t0003g0105 a0006c0017t0003g0252 a0007c0027t0016g0031 a0010c0057t0003g0091 a0011c0056t0016g0224 a0012c0035t0003g0253 a0015c0025t0002g0053 a0016c0039t0003g0060 a0017c0021t0014g0273 a0018c0050t0001g0301 a0021c0044t0002g0198 a0022c0055t0003g0207 a0023c0022t0003g0120	156	312	0.5000	14	c.214 others(31): Show c.214+3121_214+3134dupCCCACCTGTGTGAC	SYNJ2	ENSG00000078269.15	transcript	ENST00000355585.9	protein_coding	2/26		INFO_REALIGN_3_PRIME	chr6	TogoVar
SYNJ2_chr6_157976863_158104176	158047774	C C	CAAAAAAA others(7): Show CAAAAAAAAAAAAAA	intron_variant intron_variant	MODIFIER	HG03490.hp2 HG03490.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0002 a0001c0001t0002	a0001c0001t0002g0161 a0001c0001t0002g0161	1	312	0.0032	14	c.795 others(31): Show c.795+4393_795+4406dupAAAAAAAAAAAAAA	SYNJ2	ENSG00000078269.15	transcript	ENST00000355585.9	protein_coding	5/26		INFO_REALIGN_3_PRIME	chr6	TogoVar
SYNJ2_chr6_157976863_158104176	158077650	T T	TAAAAAAA others(7): Show TAAAAAAAAAAAAAA	intron_variant intron_variant	MODIFIER	HG06807.hp2 HG06807.hp2	a0002 a0002	a0002c0012 a0002c0012	a0002c0012t0027 a0002c0012t0027	a0002c0012t0027g0160 a0002c0012t0027g0160	1	312	0.0032	14	c.245 others(31): Show c.2450-498_2450-485dupAAAAAAAAAAAAAA	SYNJ2	ENSG00000078269.15	transcript	ENST00000355585.9	protein_coding	17/26		INFO_REALIGN_3_PRIME	chr6	TogoVar
SYNM_chr15_99100080_99140593	99104555	A A	ATATATAT others(7): Show ATATATATATTTTTT	upstream_gene_variant upstream_gene_variant	MODIFIER	NA18522.hp1 NA18941.hp2 NA18989.hp1 others(1): Show NA18522.hp1 NA18941.hp2 NA18989.hp1 NA19001.hp2	a0001 a0002 a0042 a0001 a0002 a0042	a0001c0001 a0002c0002 a0042c0037 a0001c0001 a0002c0002 a0042c0037	a0001c0001t0001 a0002c0002t0001 a0042c0037t0022 a0001c0001t0001 a0002c0002t0001 a0042c0037t0022	a0001c0001t0001g0104 a0001c0001t0001g0164 a0002c0002t0001g0006 others(1): Show a0001c0001t0001g0104 a0001c0001t0001g0164 a0002c0002t0001g0006 a0042c0037t0022g0066	4	420	0.0095	14	c.-64 others(23): Show c.-645_-644insTATATATATTTTTT	SYNM	ENSG00000182253.15	transcript	ENST00000336292.11	protein_coding		524		chr15	TogoVar
SYNM_chr15_99100080_99140593	99104555	A A	ATATATAT others(7): Show ATATATATTTTTTTT	upstream_gene_variant upstream_gene_variant	MODIFIER	HG00438.hp1 HG03834.hp1 NA19085.hp2 HG00438.hp1 HG03834.hp1 NA19085.hp2	a0001 a0002 a0013 a0001 a0002 a0013	a0001c0001 a0002c0002 a0013c0014 a0001c0001 a0002c0002 a0013c0014	a0001c0001t0001 a0002c0002t0002 a0013c0014t0002 a0001c0001t0001 a0002c0002t0002 a0013c0014t0002	a0001c0001t0001g0027 a0002c0002t0002g0007 a0013c0014t0002g0131 a0001c0001t0001g0027 a0002c0002t0002g0007 a0013c0014t0002g0131	3	420	0.0071	14	c.-64 others(23): Show c.-645_-644insTATATATTTTTTTT	SYNM	ENSG00000182253.15	transcript	ENST00000336292.11	protein_coding		524		chr15	TogoVar
SYNM_chr15_99100080_99140593	99104555	A A	ATATATTT others(7): Show ATATATTTTTTTTTT	upstream_gene_variant upstream_gene_variant	MODIFIER	HG02015.hp2 NA18940.hp1 HG02015.hp2 NA18940.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0005 a0001c0001t0001g0165 a0001c0001t0001g0005 a0001c0001t0001g0165	2	420	0.0048	14	c.-64 others(23): Show c.-645_-644insTATATTTTTTTTTT	SYNM	ENSG00000182253.15	transcript	ENST00000336292.11	protein_coding		524		chr15	TogoVar
SYNM_chr15_99100080_99140593	99104555	A A	ATATTTTT others(7): Show ATATTTTTTTTTTTT	upstream_gene_variant upstream_gene_variant	MODIFIER	NA19007.hp1 NA19007.hp1	a0012 a0012	a0012c0015 a0012c0015	a0012c0015t0001 a0012c0015t0001	a0012c0015t0001g0020 a0012c0015t0001g0020	1	420	0.0024	14	c.-64 others(23): Show c.-645_-644insTATTTTTTTTTTTT	SYNM	ENSG00000182253.15	transcript	ENST00000336292.11	protein_coding		524		chr15	TogoVar
SYNPO2_chr4_118883854_119066247	118887166	A A	AGTGTGTG others(7): Show AGTGTGTGTGTGTGT	upstream_gene_variant upstream_gene_variant	MODIFIER	HG02723.hp2 NA18906.hp1 NA19030.hp2 HG02723.hp2 NA18906.hp1 NA19030.hp2	a0002 a0004 a0002 a0004	a0002c0019 a0004c0009 a0004c0010 a0002c0019 a0004c0009 a0004c0010	a0002c0019t0010 a0004c0009t0001 a0004c0010t0011 a0002c0019t0010 a0004c0009t0001 a0004c0010t0011	a0002c0019t0010g0043 a0004c0009t0001g0042 a0004c0010t0011g0010 a0002c0019t0010g0043 a0004c0009t0001g0042 a0004c0010t0011g0010	3	310	0.0097	14	c.-18 others(25): Show c.-1871_-1870insGTGTGTGTGTGTGT	SYNPO2	ENSG00000172403.11	transcript	ENST00000307142.9	protein_coding		1687		chr4	TogoVar
SYNPO2_chr4_118883854_119066247	118890697	T T	TTCTCTCT others(7): Show TTCTCTCTCTCTCTC	intron_variant intron_variant	MODIFIER	HG00741.hp2 HG01192.hp2 HG01257.hp1 others(8): Show HG00741.hp2 HG01192.hp2 HG01257.hp1 HG01934.hp1 HG02071.hp1 HG02080.hp1 HG02258.hp2 HG02622.hp2 HG03239.hp2 HG04228.hp1 NA18942.hp2	a0001 a0003 a0004 others(2): Show a0001 a0003 a0004 a0005 a0013	a0001c0001 a0001c0037 a0003c0006 others(3): Show a0001c0001 a0001c0037 a0003c0006 a0004c0014 a0005c0007 a0013c0033	a0001c0001t0001 a0001c0001t0002 a0001c0001t0013 others(6): Show a0001c0001t0001 a0001c0001t0002 a0001c0001t0013 a0001c0037t0026 a0003c0006t0001 a0003c0006t0008 a0004c0014t0043 a0005c0007t0001 a0013c0033t0023	a0001c0001t0001g0114 a0001c0001t0001g0115 a0001c0001t0002g0117 others(8): Show a0001c0001t0001g0114 a0001c0001t0001g0115 a0001c0001t0002g0117 a0001c0001t0002g0180 a0001c0001t0013g0179 a0001c0037t0026g0118 a0003c0006t0001g0116 a0003c0006t0008g0174 a0004c0014t0043g0119 a0005c0007t0001g0178 a0013c0033t0023g0181	11	310	0.0355	14	c.105 others(31): Show c.105+1580_105+1593dupCTCTCTCTCTCTCT	SYNPO2	ENSG00000172403.11	transcript	ENST00000307142.9	protein_coding	1/4		INFO_REALIGN_3_PRIME	chr4	TogoVar
SYNPO2_chr4_118883854_119066247	118890733	C C	CTCTCTCT others(7): Show CTCTCTCTCTCTCTG	intron_variant intron_variant	MODIFIER	HG01123.hp2 NA18990.hp1 HG01123.hp2 NA18990.hp1	a0001 a0002 a0001 a0002	a0001c0005 a0002c0004 a0001c0005 a0002c0004	a0001c0005t0002 a0002c0004t0005 a0001c0005t0002 a0002c0004t0005	a0001c0005t0002g0190 a0002c0004t0005g0191 a0001c0005t0002g0190 a0002c0004t0005g0191	2	310	0.0065	14	c.105 others(31): Show c.105+1593_105+1594insCTCTCTCTCTCTGT	SYNPO2	ENSG00000172403.11	transcript	ENST00000307142.9	protein_coding	1/4		INFO_REALIGN_3_PRIME	chr4	TogoVar
SYNPO2_chr4_118883854_119066247	118890733	C C	CTCTCTCT others(7): Show CTCTCTCTCTCTGTG	intron_variant intron_variant	MODIFIER	HG01975.hp1 HG03041.hp2 HG03579.hp1 HG01975.hp1 HG03041.hp2 HG03579.hp1	a0001 a0007 a0001 a0007	a0001c0001 a0007c0012 a0001c0001 a0007c0012	a0001c0001t0001 a0001c0001t0012 a0007c0012t0006 a0001c0001t0001 a0001c0001t0012 a0007c0012t0006	a0001c0001t0001g0207 a0001c0001t0012g0148 a0007c0012t0006g0147 a0001c0001t0001g0207 a0001c0001t0012g0148 a0007c0012t0006g0147	3	310	0.0097	14	c.105 others(31): Show c.105+1593_105+1594insCTCTCTCTCTGTGT	SYNPO2	ENSG00000172403.11	transcript	ENST00000307142.9	protein_coding	1/4		INFO_REALIGN_3_PRIME	chr4	TogoVar
SYNPO2_chr4_118883854_119066247	118890733	C C	CTCTCTCT others(7): Show CTCTCTCTCTGTGTG	intron_variant intron_variant	MODIFIER	HG00738.hp2 NA18945.hp2 NA19006.hp1 HG00738.hp2 NA18945.hp2 NA19006.hp1	a0001 a0002 a0004 a0001 a0002 a0004	a0001c0001 a0002c0003 a0004c0014 a0001c0001 a0002c0003 a0004c0014	a0001c0001t0012 a0002c0003t0032 a0004c0014t0004 a0001c0001t0012 a0002c0003t0032 a0004c0014t0004	a0001c0001t0012g0155 a0002c0003t0032g0008 a0004c0014t0004g0009 a0001c0001t0012g0155 a0002c0003t0032g0008 a0004c0014t0004g0009	3	310	0.0097	14	c.105 others(31): Show c.105+1593_105+1594insCTCTCTCTGTGTGT	SYNPO2	ENSG00000172403.11	transcript	ENST00000307142.9	protein_coding	1/4		INFO_REALIGN_3_PRIME	chr4	TogoVar
SYNPO2_chr4_118883854_119066247	118900699	C C	CTATATAT others(7): Show CTATATATATATATA	intron_variant intron_variant	MODIFIER	HG00423.hp2 HG01261.hp1 HG00423.hp2 HG01261.hp1	a0002 a0002	a0002c0003 a0002c0004 a0002c0003 a0002c0004	a0002c0003t0001 a0002c0004t0005 a0002c0003t0001 a0002c0004t0005	a0002c0003t0001g0025 a0002c0004t0005g0299 a0002c0003t0001g0025 a0002c0004t0005g0299	2	310	0.0065	14	c.105 others(33): Show c.105+11559_105+11560insATATATATATATAT	SYNPO2	ENSG00000172403.11	transcript	ENST00000307142.9	protein_coding	1/4		INFO_REALIGN_3_PRIME	chr4	TogoVar
SYNPO2_chr4_118883854_119066247	118900701	C C	CTATATAT others(7): Show CTATATATATATATA	intron_variant intron_variant	MODIFIER	HG01433.hp2 HG02523.hp1 HG01433.hp2 HG02523.hp1	a0001 a0002 a0001 a0002	a0001c0001 a0002c0003 a0001c0001 a0002c0003	a0001c0001t0001 a0002c0003t0001 a0001c0001t0001 a0002c0003t0001	a0001c0001t0001g0012 a0002c0003t0001g0027 a0001c0001t0001g0012 a0002c0003t0001g0027	2	310	0.0065	14	c.105 others(33): Show c.105+11561_105+11562insATATATATATATAT	SYNPO2	ENSG00000172403.11	transcript	ENST00000307142.9	protein_coding	1/4		INFO_REALIGN_3_PRIME	chr4	TogoVar
SYNPO2_chr4_118883854_119066247	118900703	C C	CTATATAT others(7): Show CTATATATATATATA	intron_variant intron_variant	MODIFIER	HG02148.hp1 NA18522.hp1 HG02148.hp1 NA18522.hp1	a0004 a0009 a0004 a0009	a0004c0011 a0009c0020 a0004c0011 a0009c0020	a0004c0011t0004 a0009c0020t0014 a0004c0011t0004 a0009c0020t0014	a0004c0011t0004g0297 a0009c0020t0014g0193 a0004c0011t0004g0297 a0009c0020t0014g0193	2	310	0.0065	14	c.105 others(33): Show c.105+11578_105+11591dupATATATATATATAT	SYNPO2	ENSG00000172403.11	transcript	ENST00000307142.9	protein_coding	1/4		INFO_REALIGN_3_PRIME	chr4	TogoVar
SYNPO2_chr4_118883854_119066247	118900703	C C	CTCTATAT others(7): Show CTCTATATATATATA	intron_variant intron_variant	MODIFIER	HG01123.hp2 HG01123.hp2	a0002 a0002	a0002c0004 a0002c0004	a0002c0004t0005 a0002c0004t0005	a0002c0004t0005g0191 a0002c0004t0005g0191	1	310	0.0032	14	c.105 others(33): Show c.105+11563_105+11564insCTATATATATATAT	SYNPO2	ENSG00000172403.11	transcript	ENST00000307142.9	protein_coding	1/4		INFO_REALIGN_3_PRIME	chr4	TogoVar
SYNPO2_chr4_118883854_119066247	118900703	C C	CTCTCTAT others(7): Show CTCTCTATATATATA	intron_variant intron_variant	MODIFIER	NA18952.hp2 NA18987.hp2 NA18993.hp1 NA18952.hp2 NA18987.hp2 NA18993.hp1	a0001 a0003 a0001 a0003	a0001c0001 a0001c0005 a0003c0002 a0001c0001 a0001c0005 a0003c0002	a0001c0001t0003 a0001c0005t0001 a0003c0002t0034 a0001c0001t0003 a0001c0005t0001 a0003c0002t0034	a0001c0001t0003g0243 a0001c0005t0001g0029 a0003c0002t0034g0019 a0001c0001t0003g0243 a0001c0005t0001g0029 a0003c0002t0034g0019	3	310	0.0097	14	c.105 others(33): Show c.105+11563_105+11564insCTCTATATATATAT	SYNPO2	ENSG00000172403.11	transcript	ENST00000307142.9	protein_coding	1/4		INFO_REALIGN_3_PRIME	chr4	TogoVar
SYNPO2_chr4_118883854_119066247	118900703	C C	CTCTCTCT others(7): Show CTCTCTCTATATATA	intron_variant intron_variant	MODIFIER	HG01256.hp2 HG02132.hp1 NA18946.hp1 others(1): Show HG01256.hp2 HG02132.hp1 NA18946.hp1 NA19085.hp2	a0001 a0004 a0005 a0001 a0004 a0005	a0001c0001 a0004c0011 a0005c0007 others(1): Show a0001c0001 a0004c0011 a0005c0007 a0005c0008	a0001c0001t0001 a0004c0011t0015 a0005c0007t0001 others(1): Show a0001c0001t0001 a0004c0011t0015 a0005c0007t0001 a0005c0008t0001	a0001c0001t0001g0032 a0004c0011t0015g0204 a0005c0007t0001g0033 others(1): Show a0001c0001t0001g0032 a0004c0011t0015g0204 a0005c0007t0001g0033 a0005c0008t0001g0226	4	310	0.0129	14	c.105 others(33): Show c.105+11563_105+11564insCTCTCTATATATAT	SYNPO2	ENSG00000172403.11	transcript	ENST00000307142.9	protein_coding	1/4		INFO_REALIGN_3_PRIME	chr4	TogoVar
SYNPO2_chr4_118883854_119066247	118900703	C C	CTCTCTCT others(7): Show CTCTCTCTCTATATA	intron_variant intron_variant	MODIFIER	HG02559.hp2 NA19006.hp1 HG02559.hp2 NA19006.hp1	a0001 a0002 a0001 a0002	a0001c0005 a0002c0003 a0001c0005 a0002c0003	a0001c0005t0008 a0002c0003t0032 a0001c0005t0008 a0002c0003t0032	a0001c0005t0008g0223 a0002c0003t0032g0008 a0001c0005t0008g0223 a0002c0003t0032g0008	2	310	0.0065	14	c.105 others(33): Show c.105+11563_105+11564insCTCTCTCTATATAT	SYNPO2	ENSG00000172403.11	transcript	ENST00000307142.9	protein_coding	1/4		INFO_REALIGN_3_PRIME	chr4	TogoVar
SYNPO2_chr4_118883854_119066247	118900731	A A	ATATATAT others(7): Show ATATATATATATGTC	intron_variant intron_variant	MODIFIER	HG01361.hp1 HG01361.hp1	a0002 a0002	a0002c0004 a0002c0004	a0002c0004t0007 a0002c0004t0007	a0002c0004t0007g0059 a0002c0004t0007g0059	1	310	0.0032	14	c.105 others(33): Show c.105+11591_105+11592insATATATATATGTCT	SYNPO2	ENSG00000172403.11	transcript	ENST00000307142.9	protein_coding	1/4		INFO_REALIGN_3_PRIME	chr4	TogoVar
SYNPO2_chr4_118883854_119066247	118997239	C C	CAAAAAAA others(7): Show CAAAAAAAAAAAAAA	intron_variant intron_variant	MODIFIER	HG00423.hp2 HG00735.hp1 HG00738.hp1 others(22): Show HG00423.hp2 HG00735.hp1 HG00738.hp1 HG01071.hp1 HG01081.hp2 HG01167.hp2 HG01346.hp1 HG01981.hp2 HG02004.hp2 HG02040.hp1 HG02040.hp2 HG02083.hp1 HG02132.hp1 HG02155.hp2 HG02523.hp1 HG02602.hp1 HG02698.hp2 HG02922.hp1 HG03490.hp2 HG03669.hp1 HG03710.hp2 HG03942.hp2 NA18939.hp1 NA18952.hp1 NA20905.hp1	a0001 a0002 a0003 others(2): Show a0001 a0002 a0003 a0004 a0005	a0001c0001 a0001c0005 a0002c0003 others(8): Show a0001c0001 a0001c0005 a0002c0003 a0002c0004 a0002c0027 a0003c0002 a0003c0006 a0004c0011 a0004c0015 a0004c0038 a0005c0007	a0001c0001t0003 a0001c0005t0004 a0001c0005t0050 others(15): Show a0001c0001t0003 a0001c0005t0004 a0001c0005t0050 a0002c0003t0001 a0002c0003t0004 a0002c0003t0049 a0002c0004t0001 a0002c0004t0002 a0002c0004t0005 a0002c0027t0005 a0003c0002t0001 a0003c0002t0002 a0003c0002t0003 a0003c0006t0001 a0004c0011t0004 a0004c0015t0004 a0004c0038t0020 a0005c0007t0001	a0001c0001t0003g0225 a0001c0005t0004g0276 a0001c0005t0050g0233 others(22): Show a0001c0001t0003g0225 a0001c0005t0004g0276 a0001c0005t0050g0233 a0002c0003t0001g0025 a0002c0003t0001g0027 a0002c0003t0004g0067 a0002c0003t0049g0194 a0002c0004t0001g0246 a0002c0004t0002g0016 a0002c0004t0005g0028 a0002c0004t0005g0202 a0002c0004t0005g0208 a0002c0004t0005g0219 a0002c0004t0005g0290 a0002c0027t0005g0049 a0003c0002t0001g0169 a0003c0002t0002g0030 a0003c0002t0003g0084 a0003c0006t0001g0151 a0003c0006t0001g0232 a0003c0006t0001g0283 a0004c0011t0004g0236 a0004c0015t0004g0024 a0004c0038t0020g0003 a0005c0007t0001g0033	25	310	0.0807	14	c.106 others(33): Show c.106-26186_106-26173dupAAAAAAAAAAAAAA	SYNPO2	ENSG00000172403.11	transcript	ENST00000307142.9	protein_coding	1/4		INFO_REALIGN_3_PRIME	chr4	TogoVar
SYNPO2_chr4_118883854_119066247	119007216	G G	GTATATAT others(7): Show GTATATATATATATA	intron_variant intron_variant	MODIFIER	HG00741.hp1 HG01099.hp2 HG01168.hp2 others(2): Show HG00741.hp1 HG01099.hp2 HG01168.hp2 HG01257.hp2 NA18998.hp1	a0002 a0003 a0002 a0003	a0002c0004 a0003c0002 a0002c0004 a0003c0002	a0002c0004t0004 a0003c0002t0001 a0002c0004t0004 a0003c0002t0001	a0002c0004t0004g0054 a0002c0004t0004g0069 a0002c0004t0004g0086 others(2): Show a0002c0004t0004g0054 a0002c0004t0004g0069 a0002c0004t0004g0086 a0002c0004t0004g0120 a0003c0002t0001g0295	5	310	0.0161	14	c.106 others(33): Show c.106-16198_106-16185dupATATATATATATAT	SYNPO2	ENSG00000172403.11	transcript	ENST00000307142.9	protein_coding	1/4		INFO_REALIGN_3_PRIME	chr4	TogoVar
SYNPO_chr5_150635660_150664207	150636395	C C	CGGGGGGG others(7): Show CGGGGGGGGGGGGGG	upstream_gene_variant upstream_gene_variant	MODIFIER	NA19074.hp2 NA19074.hp2	a0006 a0006	a0006c0010 a0006c0010	a0006c0010t0001 a0006c0010t0001	a0006c0010t0001g0020 a0006c0010t0001g0020	1	390	0.0026	14	c.-47 others(25): Show c.-4792_-4791insGGGGGGGGGGGGGG	SYNPO	ENSG00000171992.13	transcript	ENST00000307662.5	protein_coding		4264		chr5	TogoVar
SYNPO_chr5_150635660_150664207	150660960	T T	TCTATCCA others(7): Show TCTATCCATCCATTC	downstream_gene_variant downstream_gene_variant	MODIFIER	NA18997.hp1 NA18997.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0027 a0001c0001t0027	a0001c0001t0027g0105 a0001c0001t0027g0105	1	390	0.0026	14	c.38 others(25): Show c.3873_*3874insCTATCCATCCATTC	SYNPO	ENSG00000171992.13	transcript	ENST00000307662.5	protein_coding		1754		chr5	TogoVar
SYNPR_chr3_63273308_63621924	63313680	C C	CATATATA others(7): Show CATATATATCCATAT	intron_variant intron_variant	MODIFIER	HG01261.hp2 HG01261.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0002 a0001c0001t0002	a0001c0001t0002g0047 a0001c0001t0002g0047	1	246	0.0041	14	c.84+ others(31): Show c.84+35001_84+35014dupATCCATATATATAT	SYNPR	ENSG00000163630.11	transcript	ENST00000478300.6	protein_coding	2/5		INFO_REALIGN_3_PRIME	chr3	TogoVar
SYNPR_chr3_63273308_63621924	63313798	C C	CATATATA others(7): Show CATATATATATCCAT	intron_variant intron_variant	MODIFIER	HG02717.hp2 HG03579.hp1 HG03579.hp2 others(1): Show HG02717.hp2 HG03579.hp1 HG03579.hp2 NA19043.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0002 a0001c0001t0003 a0001c0001t0001 a0001c0001t0002 a0001c0001t0003	a0001c0001t0001g0015 a0001c0001t0002g0043 a0001c0001t0003g0036 others(1): Show a0001c0001t0001g0015 a0001c0001t0002g0043 a0001c0001t0003g0036 a0001c0001t0003g0040	4	246	0.0163	14	c.84+ others(31): Show c.84+35065_84+35078dupATCCATATATATAT	SYNPR	ENSG00000163630.11	transcript	ENST00000478300.6	protein_coding	2/5		INFO_REALIGN_3_PRIME	chr3	TogoVar
SYNPR_chr3_63273308_63621924	63313946	T T	TATATATA others(7): Show TATATATATATATCC	intron_variant intron_variant	MODIFIER	NA19043.hp2 NA19043.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0005 a0001c0001t0005	a0001c0001t0005g0109 a0001c0001t0005g0109	1	246	0.0041	14	c.84+ others(31): Show c.84+35231_84+35244dupCCATATATATATAT	SYNPR	ENSG00000163630.11	transcript	ENST00000478300.6	protein_coding	2/5		INFO_REALIGN_3_PRIME	chr3	TogoVar
SYNPR_chr3_63273308_63621924	63313976	T T	TATATATA others(7): Show TATATATATATATCC	intron_variant intron_variant	MODIFIER	HG01070.hp1 HG01175.hp1 NA20129.hp2 HG01070.hp1 HG01175.hp1 NA20129.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0002 a0001c0001t0008 a0001c0001t0001 a0001c0001t0002 a0001c0001t0008	a0001c0001t0001g0208 a0001c0001t0002g0101 a0001c0001t0008g0102 a0001c0001t0001g0208 a0001c0001t0002g0101 a0001c0001t0008g0102	3	246	0.0122	14	c.84+ others(31): Show c.84+35247_84+35260dupCCATATATATATAT	SYNPR	ENSG00000163630.11	transcript	ENST00000478300.6	protein_coding	2/5		INFO_REALIGN_3_PRIME	chr3	TogoVar
SYNPR_chr3_63273308_63621924	63314022	T T	TATATATA others(7): Show TATATATATATATCC	intron_variant intron_variant	MODIFIER	HG00544.hp1 HG00544.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0058 a0001c0001t0001g0058	1	246	0.0041	14	c.84+ others(31): Show c.84+35293_84+35306dupCCATATATATATAT	SYNPR	ENSG00000163630.11	transcript	ENST00000478300.6	protein_coding	2/5		INFO_REALIGN_3_PRIME	chr3	TogoVar
SYNPR_chr3_63273308_63621924	63388556	T T	TTGTGTGT others(7): Show TTGTGTGTGTGTGTG	intron_variant intron_variant	MODIFIER	HG01070.hp1 HG01255.hp1 HG01516.hp1 others(1): Show HG01070.hp1 HG01255.hp1 HG01516.hp1 HG02055.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0002 a0001c0001t0008 a0001c0001t0001 a0001c0001t0002 a0001c0001t0008	a0001c0001t0001g0061 a0001c0001t0001g0119 a0001c0001t0002g0114 others(1): Show a0001c0001t0001g0061 a0001c0001t0001g0119 a0001c0001t0002g0114 a0001c0001t0008g0102	4	246	0.0163	14	c.85- others(31): Show c.85-92250_85-92237dupGTGTGTGTGTGTGT	SYNPR	ENSG00000163630.11	transcript	ENST00000478300.6	protein_coding	2/5		INFO_REALIGN_3_PRIME	chr3	TogoVar
SYNPR_chr3_63273308_63621924	63408194	G G	GAAAGAAA others(7): Show GAAAGAAAGAAAGAA	intron_variant intron_variant	MODIFIER	HG02080.hp1 HG02080.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0004 a0001c0001t0004	a0001c0001t0004g0237 a0001c0001t0004g0237	1	246	0.0041	14	c.85- others(31): Show c.85-72637_85-72636insAAGAAAGAAAGAAA	SYNPR	ENSG00000163630.11	transcript	ENST00000478300.6	protein_coding	2/5		INFO_REALIGN_3_PRIME	chr3	TogoVar
SYNPR_chr3_63273308_63621924	63408277	G G	GAAAGAAA others(7): Show GAAAGAAAGAAGAGA	intron_variant intron_variant	MODIFIER	HG02647.hp1 HG02647.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0038 a0001c0001t0001g0038	1	246	0.0041	14	c.85- others(31): Show c.85-72554_85-72553insAAGAAAGAAGAGAA	SYNPR	ENSG00000163630.11	transcript	ENST00000478300.6	protein_coding	2/5		INFO_REALIGN_3_PRIME	chr3	TogoVar
SYNPR_chr3_63273308_63621924	63408382	A A	AAGAAAGA others(7): Show AAGAAAGAAAGAAAG	intron_variant intron_variant	MODIFIER	HG03942.hp2 HG03942.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0164 a0001c0001t0001g0164	1	246	0.0041	14	c.85- others(31): Show c.85-72449_85-72448insGAAAGAAAGAAAGA	SYNPR	ENSG00000163630.11	transcript	ENST00000478300.6	protein_coding	2/5		INFO_REALIGN_3_PRIME	chr3	TogoVar
SYNPR_chr3_63273308_63621924	63455756	G G	GGTGTGTG others(7): Show GGTGTGTGTGTGTGT	intron_variant intron_variant	MODIFIER	HG00099.hp2 HG00621.hp2 HG01070.hp1 others(16): Show HG00099.hp2 HG00621.hp2 HG01070.hp1 HG01257.hp1 HG01261.hp1 HG01884.hp1 HG02280.hp1 HG02451.hp2 HG02615.hp1 HG02647.hp1 HG02647.hp2 HG02886.hp2 HG02896.hp2 HG02897.hp2 HG03139.hp2 HG03209.hp1 HG03453.hp1 NA18906.hp1 NA19043.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0002 a0001c0001t0003 others(2): Show a0001c0001t0001 a0001c0001t0002 a0001c0001t0003 a0001c0001t0005 a0001c0001t0008	a0001c0001t0001g0038 a0001c0001t0001g0042 a0001c0001t0001g0077 others(16): Show a0001c0001t0001g0038 a0001c0001t0001g0042 a0001c0001t0001g0077 a0001c0001t0001g0158 a0001c0001t0001g0167 a0001c0001t0001g0168 a0001c0001t0001g0173 a0001c0001t0001g0195 a0001c0001t0002g0023 a0001c0001t0002g0096 a0001c0001t0003g0039 a0001c0001t0003g0071 a0001c0001t0003g0080 a0001c0001t0003g0095 a0001c0001t0003g0201 a0001c0001t0005g0020 a0001c0001t0005g0109 a0001c0001t0005g0171 a0001c0001t0008g0102	19	246	0.0772	14	c.85- others(31): Show c.85-25058_85-25045dupTGTGTGTGTGTGTG	SYNPR	ENSG00000163630.11	transcript	ENST00000478300.6	protein_coding	2/5		INFO_REALIGN_3_PRIME	chr3	TogoVar
SYNPR_chr3_63273308_63621924	63468491	G G	GCACACAC others(7): Show GCACACACACACACA	intron_variant intron_variant	MODIFIER	HG01884.hp2 HG02723.hp1 NA19030.hp1 HG01884.hp2 HG02723.hp1 NA19030.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0019 a0001c0001t0001g0081 a0001c0001t0001g0153 a0001c0001t0001g0019 a0001c0001t0001g0081 a0001c0001t0001g0153	3	246	0.0122	14	c.85- others(31): Show c.85-12330_85-12317dupCACACACACACACA	SYNPR	ENSG00000163630.11	transcript	ENST00000478300.6	protein_coding	2/5		INFO_REALIGN_3_PRIME	chr3	TogoVar
SYNPR_chr3_63273308_63621924	63479446	G G	GCGCGCAC others(7): Show GCGCGCACACACACA	intron_variant intron_variant	MODIFIER	HG03195.hp2 HG03195.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0213 a0001c0001t0001g0213	1	246	0.0041	14	c.85- others(29): Show c.85-1385_85-1384insGCGCACACACACAC	SYNPR	ENSG00000163630.11	transcript	ENST00000478300.6	protein_coding	2/5		INFO_REALIGN_3_PRIME	chr3	TogoVar
SYNPR_chr3_63273308_63621924	63479446	G G	GCGCGCGC others(7): Show GCGCGCGCACACACA	intron_variant intron_variant	MODIFIER	HG02004.hp2 NA18957.hp2 HG02004.hp2 NA18957.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0002 a0001c0001t0002	a0001c0001t0002g0190 a0001c0001t0002g0211 a0001c0001t0002g0190 a0001c0001t0002g0211	2	246	0.0081	14	c.85- others(29): Show c.85-1385_85-1384insGCGCGCACACACAC	SYNPR	ENSG00000163630.11	transcript	ENST00000478300.6	protein_coding	2/5		INFO_REALIGN_3_PRIME	chr3	TogoVar
SYNPR_chr3_63273308_63621924	63479446	G G	GCGCGCGC others(7): Show GCGCGCGCGCACACA	intron_variant intron_variant	MODIFIER	NA18522.hp1 NA18522.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0035 a0001c0001t0001g0035	1	246	0.0041	14	c.85- others(29): Show c.85-1385_85-1384insGCGCGCGCACACAC	SYNPR	ENSG00000163630.11	transcript	ENST00000478300.6	protein_coding	2/5		INFO_REALIGN_3_PRIME	chr3	TogoVar
SYNPR_chr3_63273308_63621924	63494404	T T	TATATATA others(7): Show TATATATATACACAC	intron_variant intron_variant	MODIFIER	HG01361.hp1 HG01361.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0165 a0001c0001t0001g0165	1	246	0.0041	14	c.209 others(33): Show c.209+13457_209+13458insCACACATATATATA	SYNPR	ENSG00000163630.11	transcript	ENST00000478300.6	protein_coding	3/5		INFO_REALIGN_3_PRIME	chr3	TogoVar
SYNPR_chr3_63273308_63621924	63494404	T T	TATATATA others(7): Show TATATATATATACAC	intron_variant intron_variant	MODIFIER	HG00099.hp2 HG00735.hp2 HG01074.hp2 others(17): Show HG00099.hp2 HG00735.hp2 HG01074.hp2 HG01106.hp2 HG01257.hp1 HG01261.hp1 HG01361.hp2 HG01433.hp2 HG01516.hp2 HG02055.hp1 HG02056.hp1 HG02280.hp1 HG02647.hp2 HG02895.hp1 HG02896.hp1 HG03491.hp1 HG03516.hp2 NA18973.hp1 NA18984.hp1 NA21309.hp1	a0001 a0001	a0001c0001 a0001c0005 a0001c0001 a0001c0005	a0001c0001t0001 a0001c0001t0002 a0001c0001t0003 others(2): Show a0001c0001t0001 a0001c0001t0002 a0001c0001t0003 a0001c0001t0007 a0001c0005t0001	a0001c0001t0001g0042 a0001c0001t0001g0057 a0001c0001t0001g0076 others(17): Show a0001c0001t0001g0042 a0001c0001t0001g0057 a0001c0001t0001g0076 a0001c0001t0001g0091 a0001c0001t0001g0157 a0001c0001t0001g0167 a0001c0001t0001g0168 a0001c0001t0001g0179 a0001c0001t0002g0096 a0001c0001t0002g0166 a0001c0001t0003g0028 a0001c0001t0003g0088 a0001c0001t0003g0095 a0001c0001t0003g0122 a0001c0001t0003g0183 a0001c0001t0003g0204 a0001c0001t0003g0218 a0001c0001t0003g0219 a0001c0001t0007g0159 a0001c0005t0001g0154	20	246	0.0813	14	c.209 others(33): Show c.209+13459_209+13460insCACATATATATATA	SYNPR	ENSG00000163630.11	transcript	ENST00000478300.6	protein_coding	3/5		INFO_REALIGN_3_PRIME	chr3	TogoVar
SYNPR_chr3_63273308_63621924	63510934	T T	TGTGTGTG others(7): Show TGTGTGTGTGTGTGC	intron_variant intron_variant	MODIFIER	HG01952.hp1 HG02055.hp2 HG02083.hp1 others(11): Show HG01952.hp1 HG02055.hp2 HG02083.hp1 HG02717.hp1 HG02717.hp2 HG02818.hp2 HG02965.hp2 HG03041.hp2 HG03453.hp2 HG03486.hp1 HG03540.hp2 HG06807.hp1 NA18906.hp1 NA18986.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0002 a0001c0001t0003 others(5): Show a0001c0001t0001 a0001c0001t0002 a0001c0001t0003 a0001c0001t0004 a0001c0001t0005 a0001c0001t0007 a0001c0001t0008 a0001c0001t0009	a0001c0001t0001g0068 a0001c0001t0002g0023 a0001c0001t0002g0114 others(11): Show a0001c0001t0001g0068 a0001c0001t0002g0023 a0001c0001t0002g0114 a0001c0001t0003g0025 a0001c0001t0003g0037 a0001c0001t0003g0040 a0001c0001t0003g0093 a0001c0001t0003g0162 a0001c0001t0004g0227 a0001c0001t0005g0172 a0001c0001t0005g0220 a0001c0001t0007g0182 a0001c0001t0008g0212 a0001c0001t0009g0223	14	246	0.0569	14	c.209 others(33): Show c.209+29979_209+29980insTGTGTGTGTGTGCG	SYNPR	ENSG00000163630.11	transcript	ENST00000478300.6	protein_coding	3/5		INFO_REALIGN_3_PRIME	chr3	TogoVar
SYNPR_chr3_63273308_63621924	63595717	T T	TTATATAT others(7): Show TTATATATATATATA	intron_variant intron_variant	MODIFIER	HG02056.hp2 HG02056.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0002 a0001c0001t0002	a0001c0001t0002g0065 a0001c0001t0002g0065	1	246	0.0041	14	c.409 others(33): Show c.409-13369_409-13356dupTATATATATATATA	SYNPR	ENSG00000163630.11	transcript	ENST00000478300.6	protein_coding	4/5		INFO_REALIGN_3_PRIME	chr3	TogoVar
SYNPR_chr3_63273308_63621924	63613610	C C	CAAAAAAA others(7): Show CAAAAAAAAAAAAAA	intron_variant intron_variant	MODIFIER	HG03139.hp1 HG03139.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0002 a0001c0001t0002	a0001c0001t0002g0004 a0001c0001t0002g0004	1	246	0.0041	14	c.601 others(31): Show c.601-1598_601-1585dupAAAAAAAAAAAAAA	SYNPR	ENSG00000163630.11	transcript	ENST00000478300.6	protein_coding	5/5		INFO_REALIGN_3_PRIME	chr3	TogoVar
SYNRG_chr17_37509807_37614418	37522134	T T	TACACACA others(7): Show TACACACACACACAC	intron_variant intron_variant	MODIFIER	HG00323.hp2 HG00558.hp1 HG00621.hp1 others(34): Show HG00323.hp2 HG00558.hp1 HG00621.hp1 HG00738.hp1 HG01123.hp1 HG01175.hp2 HG01192.hp1 HG01261.hp1 HG01358.hp1 HG01358.hp2 HG01433.hp1 HG02004.hp1 HG02132.hp2 HG02155.hp1 HG02273.hp1 HG02486.hp1 HG02630.hp1 HG03491.hp2 HG03516.hp1 HG03669.hp2 HG03942.hp1 HG03942.hp2 NA18941.hp2 NA18952.hp2 NA18957.hp1 NA18964.hp2 NA18967.hp1 NA18972.hp1 NA18991.hp2 NA18993.hp2 NA19000.hp2 NA19054.hp2 NA19058.hp1 NA19062.hp2 NA19074.hp1 NA20752.hp2 homoSapiens_chm13v2.hp1	a0001 a0003 a0004 others(3): Show a0001 a0003 a0004 a0006 a0009 a0012	a0001c0001 a0001c0003 a0003c0004 others(4): Show a0001c0001 a0001c0003 a0003c0004 a0004c0008 a0006c0009 a0009c0012 a0012c0018	a0001c0001t0004 a0001c0001t0005 a0001c0003t0006 others(9): Show a0001c0001t0004 a0001c0001t0005 a0001c0003t0006 a0003c0004t0002 a0003c0004t0004 a0003c0004t0018 a0003c0004t0025 a0003c0004t0026 a0004c0008t0020 a0006c0009t0004 a0009c0012t0004 a0012c0018t0002	a0001c0001t0004g0334 a0001c0001t0005g0115 a0001c0003t0006g0153 others(34): Show a0001c0001t0004g0334 a0001c0001t0005g0115 a0001c0003t0006g0153 a0001c0003t0006g0154 a0001c0003t0006g0325 a0003c0004t0002g0122 a0003c0004t0002g0124 a0003c0004t0002g0125 a0003c0004t0002g0126 a0003c0004t0002g0175 a0003c0004t0002g0314 a0003c0004t0004g0127 a0003c0004t0004g0267 a0003c0004t0004g0282 a0003c0004t0004g0285 a0003c0004t0004g0287 a0003c0004t0004g0289 a0003c0004t0004g0290 a0003c0004t0004g0291 a0003c0004t0004g0294 a0003c0004t0004g0297 a0003c0004t0004g0300 a0003c0004t0004g0301 a0003c0004t0004g0302 a0003c0004t0004g0310 a0003c0004t0004g0311 a0003c0004t0004g0312 a0003c0004t0004g0313 a0003c0004t0018g0321 a0003c0004t0018g0322 a0003c0004t0025g0303 a0003c0004t0026g0286 a0004c0008t0020g0257 a0004c0008t0020g0258 a0006c0009t0004g0141 a0009c0012t0004g0177 a0012c0018t0002g0323	37	349	0.1060	14	c.366 others(33): Show c.3667-1500_3667-1487dupGTGTGTGTGTGTGT	SYNRG	ENSG00000275066.5	transcript	ENST00000612223.5	protein_coding	19/21			chr17	TogoVar
SYNRG_chr17_37509807_37614418	37580478	C C	CGTGTGTG others(7): Show CGTGTGTGTGTGTGT	intron_variant intron_variant	MODIFIER	HG02258.hp2 HG03927.hp2 HG04228.hp2 others(3): Show HG02258.hp2 HG03927.hp2 HG04228.hp2 NA18950.hp2 NA18956.hp2 NA19009.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0010 a0001c0001t0012 a0001c0001t0001 a0001c0001t0010 a0001c0001t0012	a0001c0001t0001g0076 a0001c0001t0001g0077 a0001c0001t0001g0112 others(3): Show a0001c0001t0001g0076 a0001c0001t0001g0077 a0001c0001t0001g0112 a0001c0001t0001g0269 a0001c0001t0010g0191 a0001c0001t0012g0080	6	349	0.0172	14	c.590 others(31): Show c.590-2879_590-2866dupACACACACACACAC	SYNRG	ENSG00000275066.5	transcript	ENST00000612223.5	protein_coding	6/21			chr17	TogoVar
SYNRG_chr17_37509807_37614418	37580508	T T	TGAGAGAG others(7): Show TGAGAGAGAGAGAGA	intron_variant intron_variant	MODIFIER	HG01981.hp1 NA18948.hp1 NA18975.hp1 others(1): Show HG01981.hp1 NA18948.hp1 NA18975.hp1 NA19090.hp1	a0002 a0002	a0002c0002 a0002c0002	a0002c0002t0002 a0002c0002t0033 a0002c0002t0002 a0002c0002t0033	a0002c0002t0002g0216 a0002c0002t0002g0231 a0002c0002t0002g0237 others(1): Show a0002c0002t0002g0216 a0002c0002t0002g0231 a0002c0002t0002g0237 a0002c0002t0033g0006	4	349	0.0115	14	c.590 others(31): Show c.590-2896_590-2895insTCTCTCTCTCTCTC	SYNRG	ENSG00000275066.5	transcript	ENST00000612223.5	protein_coding	6/21			chr17	TogoVar
SYNRG_chr17_37509807_37614418	37580510	T T	TGAGAGAG others(7): Show TGAGAGAGAGAGAGA	intron_variant intron_variant	MODIFIER	HG00733.hp1 HG01192.hp2 HG00733.hp1 HG01192.hp2	a0002 a0002	a0002c0002 a0002c0002	a0002c0002t0002 a0002c0002t0002	a0002c0002t0002g0165 a0002c0002t0002g0327 a0002c0002t0002g0165 a0002c0002t0002g0327	2	349	0.0057	14	c.590 others(31): Show c.590-2911_590-2898dupTCTCTCTCTCTCTC	SYNRG	ENSG00000275066.5	transcript	ENST00000612223.5	protein_coding	6/21			chr17	TogoVar
SYNRG_chr17_37509807_37614418	37580510	T T	TGTGTGTG others(7): Show TGTGTGTGTGTGTGA	intron_variant intron_variant	MODIFIER	HG02965.hp1 HG02965.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0011 a0001c0001t0011	a0001c0001t0011g0341 a0001c0001t0011g0341	1	349	0.0029	14	c.590 others(31): Show c.590-2898_590-2897insTCACACACACACAC	SYNRG	ENSG00000275066.5	transcript	ENST00000612223.5	protein_coding	6/21			chr17	TogoVar
SYPL1_chr7_106085505_106117312	106107537	T T	TTGAGACC others(7): Show TTGAGACCAGCCTGG	intron_variant intron_variant	MODIFIER	HG02976.hp1 NA20129.hp2 HG02976.hp1 NA20129.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0161 a0001c0001t0001g0162 a0001c0001t0001g0161 a0001c0001t0001g0162	2	398	0.0050	14	c.69+ others(29): Show c.69+4589_69+4602dupCCAGGCTGGTCTCA	SYPL1	ENSG00000008282.10	transcript	ENST00000455385.7	protein_coding	1/4			chr7	TogoVar
SYPL2_chr1_109461546_109487134	109462434	T T	TGAGAGAG others(7): Show TGAGAGAGAGAGAGA	upstream_gene_variant upstream_gene_variant	MODIFIER	HG02145.hp2 HG02280.hp1 HG02886.hp2 others(3): Show HG02145.hp2 HG02280.hp1 HG02886.hp2 HG02922.hp1 HG03195.hp1 HG03579.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0004 a0001c0001t0004	a0001c0001t0004g0010 a0001c0001t0004g0029 a0001c0001t0004g0059 others(1): Show a0001c0001t0004g0010 a0001c0001t0004g0029 a0001c0001t0004g0059 a0001c0001t0004g0061	6	294	0.0204	14	c.-44 others(25): Show c.-4410_-4409insGAGAGAGAGAGAGA	SYPL2	ENSG00000143028.9	transcript	ENST00000369872.4	protein_coding		4111		chr1	TogoVar

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