Joint Open Genome and Omics Platform (JoGo)

Search by Variant

Regionname

Chr

Snpeff genename

Sampleids

Snpeff haplotype class

Snpeff annotation impact

Snpeff annotation impact detail

Hapid

Samplehapid

No_hapid

No_samplehapid

Start

End

Minac

Maxac

Minlen

Maxlen

Sort By

Order by

regionname	pos	ref	alt	annotation	impact	samples	ahapids	chapids	thapids	thapids	ac	an	af	len	hgvs_c	genename	geneid	featuretype	featureid	transcript_biotype	rank	distance	status	chr	external
TENM3_chr4_182238402_182808024	182497847	C C	CATATATA others(7): Show CATATATATATATAT	intron_variant intron_variant	MODIFIER	HG02129.hp1 NA19066.hp2 HG02129.hp1 NA19066.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0044 a0001c0001t0001g0082 a0001c0001t0001g0044 a0001c0001t0001g0082	2	140	0.0143	14	c.512 others(35): Show c.512-103054_512-103041dupATATATATATATAT	TENM3	ENSG00000218336.9	transcript	ENST00000511685.6	protein_coding	3/27		INFO_REALIGN_3_PRIME	chr4	TogoVar
TENM3_chr4_182238402_182808024	182603784	T T	TATATATA others(7): Show TATATATATATACAC	intron_variant intron_variant	MODIFIER	HG02622.hp1 HG03098.hp1 NA18906.hp1 others(1): Show HG02622.hp1 HG03098.hp1 NA18906.hp1 NA19240.hp2	a0001 a0007 a0009 others(1): Show a0001 a0007 a0009 a0010	a0001c0004 a0007c0048 a0009c0040 others(1): Show a0001c0004 a0007c0048 a0009c0040 a0010c0039	a0001c0004t0001 a0007c0048t0006 a0009c0040t0001 others(1): Show a0001c0004t0001 a0007c0048t0006 a0009c0040t0001 a0010c0039t0010	a0001c0004t0001g0123 a0007c0048t0006g0134 a0009c0040t0001g0125 others(1): Show a0001c0004t0001g0123 a0007c0048t0006g0134 a0009c0040t0001g0125 a0010c0039t0010g0131	4	140	0.0286	14	c.749 others(31): Show c.749+2624_749+2625insTATATATATACACA	TENM3	ENSG00000218336.9	transcript	ENST00000511685.6	protein_coding	4/27		INFO_REALIGN_3_PRIME	chr4	TogoVar
TENM3_chr4_182238402_182808024	182603784	T T	TATATATA others(7): Show TATATATATATATAC	intron_variant intron_variant	MODIFIER	HG02109.hp1 HG02109.hp1	a0001 a0001	a0001c0018 a0001c0018	a0001c0018t0003 a0001c0018t0003	a0001c0018t0003g0054 a0001c0018t0003g0054	1	140	0.0071	14	c.749 others(31): Show c.749+2624_749+2625insTATATATATATACA	TENM3	ENSG00000218336.9	transcript	ENST00000511685.6	protein_coding	4/27		INFO_REALIGN_3_PRIME	chr4	TogoVar
TENM3_chr4_182238402_182808024	182650889	A A	AAAATATA others(7): Show AAAATATATATATAT	intron_variant intron_variant	MODIFIER	NA18983.hp2 NA18983.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0013 a0001c0001t0001g0013	1	140	0.0071	14	c.989 others(31): Show c.989-2881_989-2880insAATATATATATATA	TENM3	ENSG00000218336.9	transcript	ENST00000511685.6	protein_coding	5/27		INFO_REALIGN_3_PRIME	chr4	TogoVar
TENM3_chr4_182238402_182808024	182650889	A A	AATATATA others(7): Show AATATATATATATAT	intron_variant intron_variant	MODIFIER	HG02074.hp2 HG02074.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0025 a0001c0001t0001g0025	1	140	0.0071	14	c.989 others(31): Show c.989-2860_989-2847dupTATATATATATATA	TENM3	ENSG00000218336.9	transcript	ENST00000511685.6	protein_coding	5/27		INFO_REALIGN_3_PRIME	chr4	TogoVar
TENM3_chr4_182238402_182808024	182684439	C C	CAAAAAAA others(7): Show CAAAAAAAAAAAAAA	intron_variant intron_variant	MODIFIER	HG02559.hp2 HG02630.hp1 HG03710.hp1 HG02559.hp2 HG02630.hp1 HG03710.hp1	a0001 a0001	a0001c0005 a0001c0008 a0001c0005 a0001c0008	a0001c0005t0002 a0001c0008t0001 a0001c0005t0002 a0001c0008t0001	a0001c0005t0002g0128 a0001c0008t0001g0009 a0001c0008t0001g0080 a0001c0005t0002g0128 a0001c0008t0001g0009 a0001c0008t0001g0080	3	140	0.0214	14	c.203 others(33): Show c.2035+2428_2035+2441dupAAAAAAAAAAAAAA	TENM3	ENSG00000218336.9	transcript	ENST00000511685.6	protein_coding	11/27		INFO_REALIGN_3_PRIME	chr4	TogoVar
TENM3_chr4_182238402_182808024	182701210	C C	CTTTTTTT others(7): Show CTTTTTTTTTTTTTT	intron_variant intron_variant	MODIFIER	HG01074.hp1 HG01243.hp2 HG02896.hp2 others(4): Show HG01074.hp1 HG01243.hp2 HG02896.hp2 HG02976.hp1 HG03579.hp2 NA18952.hp1 NA21309.hp1	a0001 a0001	a0001c0001 a0001c0006 a0001c0007 others(3): Show a0001c0001 a0001c0006 a0001c0007 a0001c0021 a0001c0023 a0001c0034	a0001c0001t0001 a0001c0006t0001 a0001c0006t0017 others(4): Show a0001c0001t0001 a0001c0006t0001 a0001c0006t0017 a0001c0007t0001 a0001c0021t0002 a0001c0023t0002 a0001c0034t0020	a0001c0001t0001g0047 a0001c0006t0001g0002 a0001c0006t0017g0103 others(4): Show a0001c0001t0001g0047 a0001c0006t0001g0002 a0001c0006t0017g0103 a0001c0007t0001g0119 a0001c0021t0002g0072 a0001c0023t0002g0111 a0001c0034t0020g0064	7	140	0.0500	14	c.222 others(35): Show c.2222-12862_2222-12849dupTTTTTTTTTTTTTT	TENM3	ENSG00000218336.9	transcript	ENST00000511685.6	protein_coding	12/27		INFO_REALIGN_3_PRIME	chr4	TogoVar
TENM3_chr4_182238402_182808024	182777511	A A	ATGTGTGT others(7): Show ATGTGTGTGTGTGTG	intron_variant intron_variant	MODIFIER	HG01175.hp2 HG02074.hp1 HG03831.hp1 others(2): Show HG01175.hp2 HG02074.hp1 HG03831.hp1 NA18942.hp2 NA18984.hp1	a0001 a0001	a0001c0001 a0001c0017 a0001c0020 others(1): Show a0001c0001 a0001c0017 a0001c0020 a0001c0027	a0001c0001t0001 a0001c0017t0007 a0001c0020t0001 others(2): Show a0001c0001t0001 a0001c0017t0007 a0001c0020t0001 a0001c0020t0008 a0001c0027t0002	a0001c0001t0001g0010 a0001c0017t0007g0038 a0001c0020t0001g0085 others(2): Show a0001c0001t0001g0010 a0001c0017t0007g0038 a0001c0020t0001g0085 a0001c0020t0008g0073 a0001c0027t0002g0005	5	140	0.0357	14	c.530 others(33): Show c.5304+2376_5304+2389dupGTGTGTGTGTGTGT	TENM3	ENSG00000218336.9	transcript	ENST00000511685.6	protein_coding	24/27		INFO_REALIGN_3_PRIME	chr4	TogoVar
TENM4_chr11_78647829_79446030	78704159	C C	CTATATAT others(7): Show CTATATATATATATA	intron_variant intron_variant	MODIFIER	HG01243.hp2 HG02280.hp1 HG01243.hp2 HG02280.hp1	a0001 a0001	a0001c0002 a0001c0004 a0001c0002 a0001c0004	a0001c0002t0062 a0001c0004t0055 a0001c0002t0062 a0001c0004t0055	a0001c0002t0062g0092 a0001c0004t0055g0077 a0001c0002t0062g0092 a0001c0004t0055g0077	2	94	0.0213	14	c.421 others(33): Show c.4210-1770_4210-1757dupTATATATATATATA	TENM4	ENSG00000149256.16	transcript	ENST00000278550.12	protein_coding	27/33			chr11	TogoVar
TENM4_chr11_78647829_79446030	78750849	T T	TTGTGTGT others(7): Show TTGTGTGTGTGTGTG	intron_variant intron_variant	MODIFIER	HG03195.hp1 HG03195.hp1	a0001 a0001	a0001c0032 a0001c0032	a0001c0032t0023 a0001c0032t0023	a0001c0032t0023g0014 a0001c0032t0023g0014	1	94	0.0106	14	c.275 others(33): Show c.2756+5942_2756+5955dupCACACACACACACA	TENM4	ENSG00000149256.16	transcript	ENST00000278550.12	protein_coding	19/33			chr11	TogoVar
TENM4_chr11_78647829_79446030	78893780	T T	TACACACA others(7): Show TACACACACACACAC	intron_variant intron_variant	MODIFIER	NA19043.hp2 NA19043.hp2	a0001 a0001	a0001c0005 a0001c0005	a0001c0005t0064 a0001c0005t0064	a0001c0005t0064g0094 a0001c0005t0064g0094	1	94	0.0106	14	c.750 others(31): Show c.750-2458_750-2445dupGTGTGTGTGTGTGT	TENM4	ENSG00000149256.16	transcript	ENST00000278550.12	protein_coding	7/33			chr11	TogoVar
TENM4_chr11_78647829_79446030	78904359	C C	CAAAAAAA others(7): Show CAAAAAAAAAAAAAA	intron_variant intron_variant	MODIFIER	HG00741.hp2 HG01081.hp2 HG01884.hp1 others(8): Show HG00741.hp2 HG01081.hp2 HG01884.hp1 HG02055.hp1 HG02615.hp2 HG02622.hp1 HG02717.hp1 HG02809.hp2 HG03098.hp2 HG03139.hp2 NA19240.hp1	a0001 a0005 a0001 a0005	a0001c0001 a0001c0004 a0001c0005 others(5): Show a0001c0001 a0001c0004 a0001c0005 a0001c0006 a0001c0008 a0001c0013 a0001c0030 a0005c0009	a0001c0001t0015 a0001c0001t0040 a0001c0001t0059 others(8): Show a0001c0001t0015 a0001c0001t0040 a0001c0001t0059 a0001c0004t0017 a0001c0005t0002 a0001c0006t0005 a0001c0008t0005 a0001c0008t0052 a0001c0013t0043 a0001c0030t0051 a0005c0009t0031	a0001c0001t0015g0086 a0001c0001t0040g0046 a0001c0001t0059g0085 others(8): Show a0001c0001t0015g0086 a0001c0001t0040g0046 a0001c0001t0059g0085 a0001c0004t0017g0079 a0001c0005t0002g0032 a0001c0006t0005g0023 a0001c0008t0005g0044 a0001c0008t0052g0069 a0001c0013t0043g0073 a0001c0030t0051g0052 a0005c0009t0031g0021	11	94	0.1170	14	c.494 others(29): Show c.494-850_494-837dupTTTTTTTTTTTTTT	TENM4	ENSG00000149256.16	transcript	ENST00000278550.12	protein_coding	6/33			chr11	TogoVar
TENM4_chr11_78647829_79446030	79015477	A A	AGTGTGTG others(7): Show AGTGTGTGTGTGTGT	intron_variant intron_variant	MODIFIER	HG00741.hp2 HG01361.hp1 NA19009.hp2 HG00741.hp2 HG01361.hp1 NA19009.hp2	a0001 a0001	a0001c0005 a0001c0020 a0001c0048 a0001c0005 a0001c0020 a0001c0048	a0001c0005t0002 a0001c0020t0001 a0001c0048t0003 a0001c0005t0002 a0001c0020t0001 a0001c0048t0003	a0001c0005t0002g0032 a0001c0020t0001g0031 a0001c0048t0003g0064 a0001c0005t0002g0032 a0001c0020t0001g0031 a0001c0048t0003g0064	3	94	0.0319	14	c.493 others(33): Show c.493+49247_493+49260dupACACACACACACAC	TENM4	ENSG00000149256.16	transcript	ENST00000278550.12	protein_coding	6/33			chr11	TogoVar
TENM4_chr11_78647829_79446030	79081534	G G	GGTGTGTG others(7): Show GGTGTGTGTGTGTGT	intron_variant intron_variant	MODIFIER	HG02559.hp1 HG03098.hp1 HG03195.hp1 others(4): Show HG02559.hp1 HG03098.hp1 HG03195.hp1 HG03492.hp1 HG03710.hp1 NA19009.hp1 homoSapiens_chm13v2.hp1	a0001 a0001	a0001c0001 a0001c0002 a0001c0003 others(2): Show a0001c0001 a0001c0002 a0001c0003 a0001c0032 a0001c0036	a0001c0001t0056 a0001c0002t0004 a0001c0002t0045 others(4): Show a0001c0001t0056 a0001c0002t0004 a0001c0002t0045 a0001c0003t0006 a0001c0003t0022 a0001c0032t0023 a0001c0036t0007	a0001c0001t0056g0082 a0001c0002t0004g0004 a0001c0002t0045g0059 others(4): Show a0001c0001t0056g0082 a0001c0002t0004g0004 a0001c0002t0045g0059 a0001c0003t0006g0056 a0001c0003t0022g0007 a0001c0032t0023g0014 a0001c0036t0007g0074	7	94	0.0745	14	c.-65 others(33): Show c.-65-11539_-65-11526dupACACACACACACAC	TENM4	ENSG00000149256.16	transcript	ENST00000278550.12	protein_coding	4/33			chr11	TogoVar
TENM4_chr11_78647829_79446030	79113392	G G	GGTGTGTG others(7): Show GGTGTGTGTGTGTGT	intron_variant intron_variant	MODIFIER	HG01074.hp1 HG02897.hp2 HG01074.hp1 HG02897.hp2	a0001 a0003 a0001 a0003	a0001c0012 a0003c0031 a0001c0012 a0003c0031	a0001c0012t0029 a0003c0031t0049 a0001c0012t0029 a0003c0031t0049	a0001c0012t0029g0027 a0003c0031t0049g0072 a0001c0012t0029g0027 a0003c0031t0049g0072	2	94	0.0213	14	c.-66 others(33): Show c.-66+35304_-66+35317dupACACACACACACAC	TENM4	ENSG00000149256.16	transcript	ENST00000278550.12	protein_coding	4/33			chr11	TogoVar
TENM4_chr11_78647829_79446030	79132345	C C	CAAAAAAA others(7): Show CAAAAAAAAAAAAAA	intron_variant intron_variant	MODIFIER	HG00735.hp2 HG01361.hp1 HG01978.hp1 others(4): Show HG00735.hp2 HG01361.hp1 HG01978.hp1 HG02630.hp1 HG02965.hp2 NA20752.hp1 NA20752.hp2	a0001 a0004 a0001 a0004	a0001c0001 a0001c0002 a0001c0003 others(3): Show a0001c0001 a0001c0002 a0001c0003 a0001c0043 a0001c0048 a0004c0044	a0001c0001t0007 a0001c0001t0013 a0001c0002t0003 others(4): Show a0001c0001t0007 a0001c0001t0013 a0001c0002t0003 a0001c0003t0035 a0001c0043t0024 a0001c0048t0003 a0004c0044t0030	a0001c0001t0007g0063 a0001c0001t0013g0070 a0001c0002t0003g0054 others(4): Show a0001c0001t0007g0063 a0001c0001t0013g0070 a0001c0002t0003g0054 a0001c0003t0035g0038 a0001c0043t0024g0015 a0001c0048t0003g0064 a0004c0044t0030g0025	7	94	0.0745	14	c.-66 others(33): Show c.-66+16351_-66+16364dupTTTTTTTTTTTTTT	TENM4	ENSG00000149256.16	transcript	ENST00000278550.12	protein_coding	4/33			chr11	TogoVar
TENM4_chr11_78647829_79446030	79295896	A A	AACACACA others(7): Show AACACACACACACAC	intron_variant intron_variant	MODIFIER	HG02647.hp1 HG03098.hp2 HG02647.hp1 HG03098.hp2	a0001 a0001	a0001c0001 a0001c0007 a0001c0001 a0001c0007	a0001c0001t0040 a0001c0007t0050 a0001c0001t0040 a0001c0007t0050	a0001c0001t0040g0046 a0001c0007t0050g0051 a0001c0001t0040g0046 a0001c0007t0050g0051	2	94	0.0213	14	c.-26 others(33): Show c.-265+1578_-265+1591dupGTGTGTGTGTGTGT	TENM4	ENSG00000149256.16	transcript	ENST00000278550.12	protein_coding	2/33			chr11	TogoVar
TENM4_chr11_78647829_79446030	79422248	T T	TACACACA others(7): Show TACACACACACACAC	intron_variant intron_variant	MODIFIER	HG00735.hp2 HG04204.hp2 HG00735.hp2 HG04204.hp2	a0001 a0001	a0001c0003 a0001c0005 a0001c0003 a0001c0005	a0001c0003t0035 a0001c0005t0002 a0001c0003t0035 a0001c0005t0002	a0001c0003t0035g0038 a0001c0005t0002g0041 a0001c0003t0035g0038 a0001c0005t0002g0041	2	94	0.0213	14	c.-32 others(35): Show c.-321+18247_-321+18260dupGTGTGTGTGTGTGT	TENM4	ENSG00000149256.16	transcript	ENST00000278550.12	protein_coding	1/33			chr11	TogoVar
TENT2_chr5_79607441_79693246	79626072	C C	CCACTTTG others(7): Show CCACTTTGGCTTTTT	intron_variant intron_variant	MODIFIER	HG03490.hp2 HG03490.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0003 a0001c0001t0003	a0001c0001t0003g0006 a0001c0001t0003g0006	1	344	0.0029	14	c.465 others(31): Show c.465+2596_465+2597insTCACTTTGGCTTTT	TENT2	ENSG00000164329.15	transcript	ENST00000453514.6	protein_coding	4/14		INFO_REALIGN_3_PRIME	chr5	TogoVar
TENT2_chr5_79607441_79693246	79688942	C C	CAAAAAAA others(7): Show CAAAAAAAAAAAAAA	downstream_gene_variant downstream_gene_variant	MODIFIER	NA18984.hp2 NA18984.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0007 a0001c0001t0007	a0001c0001t0007g0121 a0001c0001t0007g0121	1	344	0.0029	14	c.36 others(25): Show c.3669_*3670insAAAAAAAAAAAAAA	TENT2	ENSG00000164329.15	transcript	ENST00000453514.6	protein_coding		697		chr5	TogoVar
TENT4B_chr16_50148306_50240310	50155268	C C	CATGGGTG others(7): Show CATGGGTGTGTGTGT	intron_variant intron_variant	MODIFIER	HG01081.hp1 HG01081.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0004 a0001c0001t0004	a0001c0001t0004g0191 a0001c0001t0004g0191	1	312	0.0032	14	c.638 others(31): Show c.638+1009_638+1010insATGGGTGTGTGTGT	TENT4B	ENSG00000121274.14	transcript	ENST00000561678.7	protein_coding	1/11			chr16	TogoVar
TENT4B_chr16_50148306_50240310	50155272	G G	GGTGTGTG others(7): Show GGTGTGTGTGTGTGT	intron_variant intron_variant	MODIFIER	HG00099.hp1 HG00423.hp1 HG00597.hp2 others(11): Show HG00099.hp1 HG00423.hp1 HG00597.hp2 HG00639.hp2 HG01891.hp1 HG02071.hp2 HG02129.hp1 HG02258.hp1 HG02818.hp2 HG03130.hp2 HG03669.hp2 HG03704.hp2 NA18967.hp1 NA19066.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0002 a0001c0001t0004 others(2): Show a0001c0001t0001 a0001c0001t0002 a0001c0001t0004 a0001c0001t0009 a0001c0001t0054	a0001c0001t0001g0295 a0001c0001t0001g0296 a0001c0001t0001g0297 others(11): Show a0001c0001t0001g0295 a0001c0001t0001g0296 a0001c0001t0001g0297 a0001c0001t0001g0298 a0001c0001t0001g0310 a0001c0001t0002g0170 a0001c0001t0002g0171 a0001c0001t0002g0172 a0001c0001t0002g0173 a0001c0001t0002g0174 a0001c0001t0002g0175 a0001c0001t0004g0299 a0001c0001t0009g0168 a0001c0001t0054g0169	14	312	0.0449	14	c.638 others(31): Show c.638+1040_638+1053dupGTGTGTGTGTGTGT	TENT4B	ENSG00000121274.14	transcript	ENST00000561678.7	protein_coding	1/11		INFO_REALIGN_3_PRIME	chr16	TogoVar
TENT4B_chr16_50148306_50240310	50182891	C C	CTTTTTTT others(7): Show CTTTTTTTTTTTTTT	intron_variant intron_variant	MODIFIER	HG00323.hp1 HG02523.hp1 HG00323.hp1 HG02523.hp1	a0001 a0001	a0001c0001 a0001c0002 a0001c0001 a0001c0002	a0001c0001t0024 a0001c0002t0002 a0001c0001t0024 a0001c0002t0002	a0001c0001t0024g0065 a0001c0002t0002g0122 a0001c0001t0024g0065 a0001c0002t0002g0122	2	312	0.0064	14	c.639 others(33): Show c.639-28414_639-28401dupTTTTTTTTTTTTTT	TENT4B	ENSG00000121274.14	transcript	ENST00000561678.7	protein_coding	1/11		INFO_REALIGN_3_PRIME	chr16	TogoVar
TENT4B_chr16_50148306_50240310	50205558	C C	CTTTTTTT others(7): Show CTTTTTTTTTTTTTT	intron_variant intron_variant	MODIFIER	HG03516.hp2 HG03516.hp2	a0001 a0001	a0001c0003 a0001c0003	a0001c0003t0006 a0001c0003t0006	a0001c0003t0006g0208 a0001c0003t0006g0208	1	312	0.0032	14	c.639 others(31): Show c.639-5728_639-5715dupTTTTTTTTTTTTTT	TENT4B	ENSG00000121274.14	transcript	ENST00000561678.7	protein_coding	1/11		INFO_REALIGN_3_PRIME	chr16	TogoVar
TEP1_chr14_20360667_20418501	20368764	G G	GCACACAC others(7): Show GCACACACACACACA	intron_variant intron_variant	MODIFIER	HG00438.hp2 HG00544.hp2 HG02886.hp1 others(8): Show HG00438.hp2 HG00544.hp2 HG02886.hp1 HG04199.hp2 NA18612.hp2 NA18989.hp2 NA18999.hp1 NA19007.hp1 NA19058.hp1 NA19058.hp2 NA19090.hp1	a0004 a0006 a0011 others(4): Show a0004 a0006 a0011 a0012 a0025 a0086 a0109	a0004c0003 a0004c0047 a0006c0005 others(6): Show a0004c0003 a0004c0047 a0006c0005 a0011c0124 a0012c0016 a0025c0153 a0025c0164 a0086c0147 a0109c0117	a0004c0003t0002 a0004c0047t0002 a0006c0005t0002 others(8): Show a0004c0003t0002 a0004c0047t0002 a0006c0005t0002 a0006c0005t0003 a0011c0124t0002 a0012c0016t0002 a0012c0016t0015 a0025c0153t0002 a0025c0164t0002 a0086c0147t0023 a0109c0117t0002	a0004c0003t0002g0111 a0004c0047t0002g0283 a0006c0005t0002g0217 others(8): Show a0004c0003t0002g0111 a0004c0047t0002g0283 a0006c0005t0002g0217 a0006c0005t0003g0216 a0011c0124t0002g0112 a0012c0016t0002g0118 a0012c0016t0015g0386 a0025c0153t0002g0117 a0025c0164t0002g0245 a0086c0147t0023g0237 a0109c0117t0002g0190	11	400	0.0275	14	c.776 others(29): Show c.7761+20_7761+33dupTGTGTGTGTGTGTG	TEP1	ENSG00000129566.13	transcript	ENST00000262715.10	protein_coding	54/54			chr14	TogoVar
TEP1_chr14_20360667_20418501	20410020	C C	CAAAAAAA others(7): Show CAAAAAAAAAAAAAA	intron_variant intron_variant	MODIFIER	HG01243.hp1 HG03654.hp2 HG01243.hp1 HG03654.hp2	a0013 a0013	a0013c0026 a0013c0026	a0013c0026t0001 a0013c0026t0001	a0013c0026t0001g0304 a0013c0026t0001g0305 a0013c0026t0001g0304 a0013c0026t0001g0305	2	400	0.0050	14	c.-24 others(31): Show c.-24-1571_-24-1558dupTTTTTTTTTTTTTT	TEP1	ENSG00000129566.13	transcript	ENST00000262715.10	protein_coding	1/54			chr14	TogoVar
TEPP_chr16_57971544_57993116	57973399	A A	ATGCGCGT others(7): Show ATGCGCGTGTGTGTG	upstream_gene_variant upstream_gene_variant	MODIFIER	NA18944.hp1 NA19002.hp2 NA18944.hp1 NA19002.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0007 a0001c0001t0001g0047 a0001c0001t0001g0007 a0001c0001t0001g0047	2	446	0.0045	14	c.-32 others(25): Show c.-3238_-3237insTGCGCGTGTGTGTG	TEPP	ENSG00000159648.13	transcript	ENST00000441824.4	protein_coding		3144		chr16	TogoVar
TEPP_chr16_57971544_57993116	57973399	A A	ATGTGCAT others(7): Show ATGTGCATGTGTGTG	upstream_gene_variant upstream_gene_variant	MODIFIER	HG01069.hp2 HG01261.hp1 HG02027.hp1 others(6): Show HG01069.hp2 HG01261.hp1 HG02027.hp1 HG02040.hp2 HG03710.hp1 HG04228.hp2 NA18939.hp1 NA18965.hp1 NA18972.hp2	a0001 a0002 a0001 a0002	a0001c0001 a0002c0002 a0001c0001 a0002c0002	a0001c0001t0001 a0002c0002t0002 a0001c0001t0001 a0002c0002t0002	a0001c0001t0001g0002 a0001c0001t0001g0007 a0001c0001t0001g0012 others(5): Show a0001c0001t0001g0002 a0001c0001t0001g0007 a0001c0001t0001g0012 a0001c0001t0001g0045 a0001c0001t0001g0052 a0001c0001t0001g0120 a0001c0001t0001g0135 a0002c0002t0002g0017	9	446	0.0202	14	c.-32 others(25): Show c.-3238_-3237insTGTGCATGTGTGTG	TEPP	ENSG00000159648.13	transcript	ENST00000441824.4	protein_coding		3144		chr16	TogoVar
TEPP_chr16_57971544_57993116	57973399	A A	ATGTGCGT others(7): Show ATGTGCGTGTGTGTG	upstream_gene_variant upstream_gene_variant	MODIFIER	HG01106.hp2 HG01515.hp2 HG01517.hp2 others(10): Show HG01106.hp2 HG01515.hp2 HG01517.hp2 HG01891.hp1 HG01934.hp2 HG02615.hp2 HG02622.hp2 HG02895.hp2 HG03139.hp1 HG03453.hp2 HG03710.hp2 NA18990.hp1 NA21309.hp1	a0001 a0002 a0001 a0002	a0001c0001 a0002c0002 a0001c0001 a0002c0002	a0001c0001t0001 a0001c0001t0003 a0002c0002t0002 a0001c0001t0001 a0001c0001t0003 a0002c0002t0002	a0001c0001t0001g0009 a0001c0001t0001g0015 a0001c0001t0001g0038 others(7): Show a0001c0001t0001g0009 a0001c0001t0001g0015 a0001c0001t0001g0038 a0001c0001t0001g0072 a0001c0001t0001g0074 a0001c0001t0001g0075 a0001c0001t0001g0130 a0001c0001t0003g0137 a0002c0002t0002g0001 a0002c0002t0002g0199	13	446	0.0292	14	c.-32 others(25): Show c.-3238_-3237insTGTGCGTGTGTGTG	TEPP	ENSG00000159648.13	transcript	ENST00000441824.4	protein_coding		3144		chr16	TogoVar
TEPP_chr16_57971544_57993116	57973399	A A	ATGTGTGT others(7): Show ATGTGTGTGTGTGTG	upstream_gene_variant upstream_gene_variant	MODIFIER	HG01891.hp2 NA19030.hp2 HG01891.hp2 NA19030.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0025 a0001c0001t0001g0062 a0001c0001t0001g0025 a0001c0001t0001g0062	2	446	0.0045	14	c.-32 others(25): Show c.-3238_-3237insTGTGTGTGTGTGTG	TEPP	ENSG00000159648.13	transcript	ENST00000441824.4	protein_coding		3144		chr16	TogoVar
TEPP_chr16_57971544_57993116	57977560	A A	AGTGTGTG others(7): Show AGTGTGTGTGTGTGT	intron_variant intron_variant	MODIFIER	HG02615.hp1 HG02809.hp2 HG02818.hp2 HG02615.hp1 HG02809.hp2 HG02818.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0003 a0001c0001t0001 a0001c0001t0003	a0001c0001t0001g0036 a0001c0001t0003g0106 a0001c0001t0001g0036 a0001c0001t0003g0106	3	446	0.0067	14	c.-2- others(27): Show c.-2-242_-2-229dupGTGTGTGTGTGTGT	TEPP	ENSG00000159648.13	transcript	ENST00000441824.4	protein_coding	1/7		INFO_REALIGN_3_PRIME	chr16	TogoVar
TERB1_chr16_66749640_66806584	66794912	A A	AACACACA others(7): Show AACACACACACACAC	intron_variant intron_variant	MODIFIER	HG00738.hp1 HG00738.hp1	a0001 a0001	a0001c0003 a0001c0003	a0001c0003t0001 a0001c0003t0001	a0001c0003t0001g0182 a0001c0003t0001g0182	1	352	0.0028	14	c.31+ others(29): Show c.31+1855_31+1856insGTGTGTGTGTGTGT	TERB1	ENSG00000249961.10	transcript	ENST00000433154.6	protein_coding	3/18			chr16	TogoVar
TERB2_chr15_44951687_44984229	44977098	A A	AACACACA others(7): Show AACACACACACACAC	intron_variant intron_variant	MODIFIER	HG01243.hp1 HG01884.hp2 HG02280.hp1 others(13): Show HG01243.hp1 HG01884.hp2 HG02280.hp1 HG02818.hp1 HG03017.hp1 HG03540.hp2 HG03579.hp2 HG03927.hp1 HG04115.hp1 HG04184.hp1 NA18939.hp1 NA18955.hp1 NA19059.hp1 NA19240.hp1 NA19240.hp2 NA20129.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0002 a0001c0001t0002	a0001c0001t0002g0019 a0001c0001t0002g0195 a0001c0001t0002g0203 others(11): Show a0001c0001t0002g0019 a0001c0001t0002g0195 a0001c0001t0002g0203 a0001c0001t0002g0204 a0001c0001t0002g0205 a0001c0001t0002g0206 a0001c0001t0002g0207 a0001c0001t0002g0208 a0001c0001t0002g0209 a0001c0001t0002g0211 a0001c0001t0002g0212 a0001c0001t0002g0214 a0001c0001t0002g0215 a0001c0001t0002g0216	16	346	0.0462	14	c.524 others(31): Show c.524-1386_524-1373dupACACACACACACAC	TERB2	ENSG00000167014.11	transcript	ENST00000340827.4	protein_coding	6/6		INFO_REALIGN_3_PRIME	chr15	TogoVar
TESC_chr12_117033923_117104416	117041020	C C	CGGGGAGG others(7): Show CGGGGAGGGGGATGG	intron_variant intron_variant	MODIFIER	HG01891.hp2 HG02055.hp1 HG02258.hp2 others(3): Show HG01891.hp2 HG02055.hp1 HG02258.hp2 HG03486.hp2 HG03516.hp2 NA20129.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0001 a0001c0001t0001g0079 a0001c0001t0001g0245 others(1): Show a0001c0001t0001g0001 a0001c0001t0001g0079 a0001c0001t0001g0245 a0001c0001t0001g0283	6	312	0.0192	14	c.567 others(29): Show c.567+913_567+926dupCCATCCCCCTCCCC	TESC	ENSG00000088992.18	transcript	ENST00000335209.12	protein_coding	7/7			chr12	TogoVar
TESC_chr12_117033923_117104416	117066200	C C	CTTTTTTT others(7): Show CTTTTTTTTTTTTTT	intron_variant intron_variant	MODIFIER	HG01175.hp2 HG01243.hp2 HG01261.hp1 others(1): Show HG01175.hp2 HG01243.hp2 HG01261.hp1 HG01361.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0002 a0001c0001t0002	a0001c0001t0002g0197 a0001c0001t0002g0234 a0001c0001t0002g0292 others(1): Show a0001c0001t0002g0197 a0001c0001t0002g0234 a0001c0001t0002g0292 a0001c0001t0002g0293	4	312	0.0128	14	c.128 others(31): Show c.128+9057_128+9070dupAAAAAAAAAAAAAA	TESC	ENSG00000088992.18	transcript	ENST00000335209.12	protein_coding	2/7			chr12	TogoVar
TESC_chr12_117033923_117104416	117075889	A A	ATATGTGT others(7): Show ATATGTGTGTGTGTG	intron_variant intron_variant	MODIFIER	HG03471.hp1 HG03471.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0003 a0001c0001t0003	a0001c0001t0003g0070 a0001c0001t0003g0070	1	312	0.0032	14	c.59- others(27): Show c.59-550_59-549insCACACACACACATA	TESC	ENSG00000088992.18	transcript	ENST00000335209.12	protein_coding	1/7			chr12	TogoVar
TESC_chr12_117033923_117104416	117075891	A A	ATATATAT others(7): Show ATATATATATGTGTG	intron_variant intron_variant	MODIFIER	NA19030.hp2 NA19030.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0003 a0001c0001t0003	a0001c0001t0003g0291 a0001c0001t0003g0291	1	312	0.0032	14	c.59- others(27): Show c.59-552_59-551insCACACATATATATA	TESC	ENSG00000088992.18	transcript	ENST00000335209.12	protein_coding	1/7			chr12	TogoVar
TESC_chr12_117033923_117104416	117075895	A A	ATATATAT others(7): Show ATATATATGTGTGTG	intron_variant intron_variant	MODIFIER	HG02615.hp1 HG02615.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0246 a0001c0001t0001g0246	1	312	0.0032	14	c.59- others(27): Show c.59-556_59-555insCACACACATATATA	TESC	ENSG00000088992.18	transcript	ENST00000335209.12	protein_coding	1/7			chr12	TogoVar
TESC_chr12_117033923_117104416	117075913	A A	ATATATGT others(7): Show ATATATGTGTGTGTG	intron_variant intron_variant	MODIFIER	NA19043.hp1 NA19043.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0002 a0001c0001t0002	a0001c0001t0002g0044 a0001c0001t0002g0044	1	312	0.0032	14	c.59- others(27): Show c.59-574_59-573insCACACACACATATA	TESC	ENSG00000088992.18	transcript	ENST00000335209.12	protein_coding	1/7			chr12	TogoVar
TESC_chr12_117033923_117104416	117075923	G G	GTGTATAT others(7): Show GTGTATATATATATA	intron_variant intron_variant	MODIFIER	NA19080.hp2 NA19080.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0005 a0001c0001t0005	a0001c0001t0005g0279 a0001c0001t0005g0279	1	312	0.0032	14	c.59- others(27): Show c.59-584_59-583insTATATATATATACA	TESC	ENSG00000088992.18	transcript	ENST00000335209.12	protein_coding	1/7			chr12	TogoVar
TESC_chr12_117033923_117104416	117075937	A A	ATATATAT others(7): Show ATATATATATATATG	intron_variant intron_variant	MODIFIER	HG03942.hp2 NA18952.hp1 NA18995.hp2 others(2): Show HG03942.hp2 NA18952.hp1 NA18995.hp2 NA19055.hp2 NA19058.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0002 a0001c0001t0001 a0001c0001t0002	a0001c0001t0001g0266 a0001c0001t0001g0267 a0001c0001t0001g0275 others(2): Show a0001c0001t0001g0266 a0001c0001t0001g0267 a0001c0001t0001g0275 a0001c0001t0001g0277 a0001c0001t0002g0276	5	312	0.0160	14	c.59- others(27): Show c.59-598_59-597insCATATATATATATA	TESC	ENSG00000088992.18	transcript	ENST00000335209.12	protein_coding	1/7			chr12	TogoVar
TESK2_chr1_45338883_45496163	45385710	G G	GTATATAT others(7): Show GTATATATATATATA	intron_variant intron_variant	MODIFIER	HG03195.hp2 HG03195.hp2	a0001 a0001	a0001c0002 a0001c0002	a0001c0002t0004 a0001c0002t0004	a0001c0002t0004g0266 a0001c0002t0004g0266	1	286	0.0035	14	c.393 others(29): Show c.393+188_393+201dupTATATATATATATA	TESK2	ENSG00000070759.17	transcript	ENST00000372086.4	protein_coding	4/10			chr1	TogoVar
TESK2_chr1_45338883_45496163	45436181	C C	CTTTTTTT others(7): Show CTTTTTTTTTTTTTT	intron_variant intron_variant	MODIFIER	HG00609.hp2 HG01109.hp2 HG01123.hp1 others(9): Show HG00609.hp2 HG01109.hp2 HG01123.hp1 HG01169.hp1 HG01243.hp1 HG01515.hp2 HG02735.hp2 HG02970.hp1 NA18967.hp1 NA18970.hp2 NA19000.hp1 NA19067.hp2	a0001 a0001	a0001c0001 a0001c0002 a0001c0003 a0001c0001 a0001c0002 a0001c0003	a0001c0001t0001 a0001c0001t0008 a0001c0002t0008 others(1): Show a0001c0001t0001 a0001c0001t0008 a0001c0002t0008 a0001c0003t0005	a0001c0001t0001g0178 a0001c0001t0001g0195 a0001c0001t0001g0198 others(9): Show a0001c0001t0001g0178 a0001c0001t0001g0195 a0001c0001t0001g0198 a0001c0001t0001g0199 a0001c0001t0001g0220 a0001c0001t0001g0224 a0001c0001t0001g0249 a0001c0001t0001g0253 a0001c0001t0001g0257 a0001c0001t0008g0262 a0001c0002t0008g0150 a0001c0003t0005g0158	12	286	0.0420	14	c.223 others(33): Show c.223-14349_223-14336dupAAAAAAAAAAAAAA	TESK2	ENSG00000070759.17	transcript	ENST00000372086.4	protein_coding	2/10			chr1	TogoVar
TESK2_chr1_45338883_45496163	45452032	C C	CAAAAAAA others(7): Show CAAAAAAAAAAAAAA	intron_variant intron_variant	MODIFIER	HG00544.hp2 NA18959.hp1 HG00544.hp2 NA18959.hp1	a0001 a0001	a0001c0005 a0001c0005	a0001c0005t0013 a0001c0005t0013	a0001c0005t0013g0119 a0001c0005t0013g0120 a0001c0005t0013g0119 a0001c0005t0013g0120	2	286	0.0070	14	c.222 others(31): Show c.222+5518_222+5531dupTTTTTTTTTTTTTT	TESK2	ENSG00000070759.17	transcript	ENST00000372086.4	protein_coding	2/10			chr1	TogoVar
TESK2_chr1_45338883_45496163	45486782	T T	TACACACA others(7): Show TACACACACACACAC	intron_variant intron_variant	MODIFIER	HG00438.hp2 HG00597.hp2 HG00642.hp1 others(23): Show HG00438.hp2 HG00597.hp2 HG00642.hp1 HG01167.hp2 HG01169.hp1 HG01891.hp2 HG02015.hp1 HG02040.hp1 HG02074.hp1 HG02129.hp2 HG02165.hp1 HG02559.hp2 HG02572.hp2 HG02818.hp1 HG02895.hp2 HG02897.hp1 HG03471.hp2 HG03486.hp1 HG06807.hp2 NA18944.hp2 NA18953.hp2 NA18978.hp2 NA18985.hp2 NA19077.hp2 NA19090.hp2 NA19240.hp2	a0001 a0001	a0001c0001 a0001c0002 a0001c0001 a0001c0002	a0001c0001t0001 a0001c0001t0004 a0001c0002t0004 others(1): Show a0001c0001t0001 a0001c0001t0004 a0001c0002t0004 a0001c0002t0008	a0001c0001t0001g0149 a0001c0001t0001g0155 a0001c0001t0001g0168 others(23): Show a0001c0001t0001g0149 a0001c0001t0001g0155 a0001c0001t0001g0168 a0001c0001t0001g0175 a0001c0001t0001g0176 a0001c0001t0001g0177 a0001c0001t0001g0178 a0001c0001t0001g0179 a0001c0001t0001g0180 a0001c0001t0001g0181 a0001c0001t0001g0182 a0001c0001t0001g0184 a0001c0001t0001g0185 a0001c0001t0001g0186 a0001c0001t0001g0255 a0001c0001t0001g0259 a0001c0001t0001g0264 a0001c0001t0004g0270 a0001c0001t0004g0273 a0001c0002t0004g0268 a0001c0002t0004g0269 a0001c0002t0004g0271 a0001c0002t0004g0272 a0001c0002t0004g0274 a0001c0002t0004g0275 a0001c0002t0008g0183	26	286	0.0909	14	c.-87 others(31): Show c.-87+4056_-87+4069dupGTGTGTGTGTGTGT	TESK2	ENSG00000070759.17	transcript	ENST00000372086.4	protein_coding	1/10			chr1	TogoVar
TESPA1_chr12_54943015_54989762	54969021	G G	GTGTGTGT others(7): Show GTGTGTGTGTATATA	intron_variant intron_variant	MODIFIER	NA18957.hp2 NA18957.hp2	a0001 a0001	a0001c0007 a0001c0007	a0001c0007t0017 a0001c0007t0017	a0001c0007t0017g0279 a0001c0007t0017g0279	1	376	0.0027	14	c.207 others(31): Show c.207-1130_207-1129insTATATACACACACA	TESPA1	ENSG00000135426.16	transcript	ENST00000449076.6	protein_coding	3/10			chr12	TogoVar
TES_chr7_116205539_116263783	116229033	T T	TATATATA others(7): Show TATATATATATATAA	intron_variant intron_variant	MODIFIER	HG00558.hp1 HG02074.hp1 HG02280.hp1 others(3): Show HG00558.hp1 HG02074.hp1 HG02280.hp1 HG02976.hp2 HG03486.hp1 NA19091.hp1	a0001 a0001	a0001c0002 a0001c0002	a0001c0002t0001 a0001c0002t0006 a0001c0002t0001 a0001c0002t0006	a0001c0002t0001g0149 a0001c0002t0001g0171 a0001c0002t0001g0183 others(3): Show a0001c0002t0001g0149 a0001c0002t0001g0171 a0001c0002t0001g0183 a0001c0002t0006g0056 a0001c0002t0006g0057 a0001c0002t0006g0058	6	386	0.0155	14	c.28- others(29): Show c.28-5500_28-5499insTATATATATATAAA	TES	ENSG00000135269.18	transcript	ENST00000358204.9	protein_coding	1/6		INFO_REALIGN_3_PRIME	chr7	TogoVar
TES_chr7_116205539_116263783	116238596	T T	TTATTATT others(7): Show TTATTATTATTATTA	intron_variant intron_variant	MODIFIER	HG02809.hp2 HG02809.hp2	a0001 a0001	a0001c0002 a0001c0002	a0001c0002t0006 a0001c0002t0006	a0001c0002t0006g0060 a0001c0002t0006g0060	1	386	0.0026	14	c.113 others(31): Show c.113+3979_113+3992dupATTATTATTATTAT	TES	ENSG00000135269.18	transcript	ENST00000358204.9	protein_coding	2/6		INFO_REALIGN_3_PRIME	chr7	TogoVar
TET1_chr10_68555337_68699487	68569166	C C	CTTTTTTT others(7): Show CTTTTTTTTTTTTTT	intron_variant intron_variant	MODIFIER	HG00140.hp1 HG00140.hp1	a0003 a0003	a0003c0020 a0003c0020	a0003c0020t0004 a0003c0020t0004	a0003c0020t0004g0202 a0003c0020t0004g0202	1	282	0.0036	14	c.-12 others(33): Show c.-122-3040_-122-3027dupTTTTTTTTTTTTTT	TET1	ENSG00000138336.9	transcript	ENST00000373644.5	protein_coding	1/11		INFO_REALIGN_3_PRIME	chr10	TogoVar
TET1_chr10_68555337_68699487	68595612	C C	CTTTTTTT others(7): Show CTTTTTTTTTTTTTT	intron_variant intron_variant	MODIFIER	HG00438.hp2 HG01109.hp1 HG02523.hp1 others(16): Show HG00438.hp2 HG01109.hp1 HG02523.hp1 HG02698.hp1 HG03017.hp2 HG03471.hp2 NA18747.hp1 NA18948.hp2 NA18964.hp1 NA18966.hp2 NA18969.hp1 NA18973.hp2 NA18995.hp2 NA18998.hp2 NA19007.hp1 NA19010.hp1 NA19056.hp1 NA19064.hp1 NA20752.hp2	a0004 a0007 a0008 others(2): Show a0004 a0007 a0008 a0009 a0022	a0004c0003 a0004c0032 a0007c0007 others(3): Show a0004c0003 a0004c0032 a0007c0007 a0008c0010 a0009c0011 a0022c0031	a0004c0003t0003 a0004c0003t0005 a0004c0003t0006 others(6): Show a0004c0003t0003 a0004c0003t0005 a0004c0003t0006 a0004c0003t0025 a0004c0032t0005 a0007c0007t0002 a0008c0010t0002 a0009c0011t0006 a0022c0031t0005	a0004c0003t0003g0192 a0004c0003t0003g0241 a0004c0003t0003g0246 others(16): Show a0004c0003t0003g0192 a0004c0003t0003g0241 a0004c0003t0003g0246 a0004c0003t0003g0249 a0004c0003t0003g0250 a0004c0003t0003g0251 a0004c0003t0005g0253 a0004c0003t0006g0008 a0004c0003t0006g0041 a0004c0003t0006g0042 a0004c0003t0006g0172 a0004c0003t0006g0175 a0004c0003t0025g0223 a0004c0032t0005g0244 a0007c0007t0002g0170 a0008c0010t0002g0138 a0008c0010t0002g0139 a0009c0011t0006g0166 a0022c0031t0005g0239	19	282	0.0674	14	c.191 others(33): Show c.1915-5360_1915-5347dupTTTTTTTTTTTTTT	TET1	ENSG00000138336.9	transcript	ENST00000373644.5	protein_coding	2/11		INFO_REALIGN_3_PRIME	chr10	TogoVar

Search by Variant

Search

Search Results