Joint Open Genome and Omics Platform (JoGo)

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regionname	pos	ref	alt	annotation	impact	samples	ahapids	chapids	thapids	thapids	ac	an	af	len	hgvs_c	genename	geneid	featuretype	featureid	transcript_biotype	rank	distance	status	chr	external
VILL_chr3_37985786_38012185	38007400	G G	GACACACA others(7): Show GACACACACACACAC	downstream_gene_variant downstream_gene_variant	MODIFIER	HG00673.hp1 HG01255.hp1 HG01255.hp2 others(19): Show HG00673.hp1 HG01255.hp1 HG01255.hp2 HG02040.hp1 HG02055.hp2 HG02056.hp2 HG02074.hp1 HG02083.hp1 HG02155.hp1 HG02738.hp1 HG02897.hp2 HG03098.hp2 HG03669.hp1 HG03669.hp2 NA18952.hp2 NA18959.hp1 NA18970.hp1 NA18985.hp1 NA19010.hp2 NA19060.hp1 NA19065.hp1 NA19089.hp1	a0001 a0002 a0003 a0001 a0002 a0003	a0001c0001 a0002c0002 a0002c0013 others(2): Show a0001c0001 a0002c0002 a0002c0013 a0003c0003 a0003c0009	a0001c0001t0001 a0002c0002t0001 a0002c0013t0001 others(2): Show a0001c0001t0001 a0002c0002t0001 a0002c0013t0001 a0003c0003t0001 a0003c0009t0001	a0001c0001t0001g0001 a0001c0001t0001g0002 a0001c0001t0001g0004 others(10): Show a0001c0001t0001g0001 a0001c0001t0001g0002 a0001c0001t0001g0004 a0001c0001t0001g0015 a0001c0001t0001g0016 a0001c0001t0001g0023 a0001c0001t0001g0025 a0001c0001t0001g0063 a0001c0001t0001g0075 a0002c0002t0001g0005 a0002c0013t0001g0071 a0003c0003t0001g0003 a0003c0009t0001g0001	22	43	0.5116	14	c.34 others(23): Show c.345_*346insACACACACACACAC	VILL	ENSG00000136059.16	transcript	ENST00000383759.7	protein_coding		216		chr3	TogoVar
VILL_chr3_37985786_38012185	38009697	T T	TTGGAGGA others(7): Show TTGGAGGATGAGGCA	downstream_gene_variant downstream_gene_variant	MODIFIER	HG02055.hp1 HG02055.hp1	a0002 a0002	a0002c0004 a0002c0004	a0002c0004t0001 a0002c0004t0001	a0002c0004t0001g0009 a0002c0004t0001g0009	1	322	0.0031	14	c.26 others(25): Show c.2642_*2643insTGGAGGATGAGGCA	VILL	ENSG00000136059.16	transcript	ENST00000383759.7	protein_coding		2513		chr3	TogoVar
VIM_chr10_17223241_17242593	17224467	C C	CTATATAT others(7): Show CTATATATATATATA	upstream_gene_variant upstream_gene_variant	MODIFIER	HG02602.hp1 HG02602.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0005 a0001c0001t0001g0005	1	385	0.0026	14	c.-42 others(25): Show c.-4205_-4204insTATATATATATATA	VIM	ENSG00000026025.16	transcript	ENST00000544301.7	protein_coding		3773		chr10	TogoVar
VIM_chr10_17223241_17242593	17224469	C C	CTATATAT others(7): Show CTATATATATATATA	upstream_gene_variant upstream_gene_variant	MODIFIER	HG02132.hp2 HG02132.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0001 a0001c0001t0001g0001	1	355	0.0028	14	c.-42 others(25): Show c.-4203_-4202insTATATATATATATA	VIM	ENSG00000026025.16	transcript	ENST00000544301.7	protein_coding		3771		chr10	TogoVar
VIM_chr10_17223241_17242593	17224471	C C	CTATATAT others(7): Show CTATATATATATATA	upstream_gene_variant upstream_gene_variant	MODIFIER	HG01358.hp2 HG03927.hp1 NA18747.hp1 others(3): Show HG01358.hp2 HG03927.hp1 NA18747.hp1 NA19012.hp1 NA19055.hp1 NA19067.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0008 a0001c0001t0001 a0001c0001t0008	a0001c0001t0001g0001 a0001c0001t0008g0001 a0001c0001t0001g0001 a0001c0001t0008g0001	6	45	0.1333	14	c.-42 others(25): Show c.-4201_-4200insTATATATATATATA	VIM	ENSG00000026025.16	transcript	ENST00000544301.7	protein_coding		3769		chr10	TogoVar
VIM_chr10_17223241_17242593	17224471	C C	CTCTATAT others(7): Show CTCTATATATATATA	upstream_gene_variant upstream_gene_variant	MODIFIER	HG02293.hp1 HG02523.hp1 HG02698.hp1 others(7): Show HG02293.hp1 HG02523.hp1 HG02698.hp1 NA18939.hp2 NA18947.hp2 NA18979.hp2 NA19005.hp2 NA19063.hp2 NA20300.hp2 NA21309.hp2	a0001 a0001	a0001c0001 a0001c0007 a0001c0001 a0001c0007	a0001c0001t0001 a0001c0001t0008 a0001c0007t0002 a0001c0001t0001 a0001c0001t0008 a0001c0007t0002	a0001c0001t0001g0001 a0001c0001t0001g0005 a0001c0001t0001g0062 others(2): Show a0001c0001t0001g0001 a0001c0001t0001g0005 a0001c0001t0001g0062 a0001c0001t0008g0001 a0001c0007t0002g0099	10	49	0.2041	14	c.-42 others(25): Show c.-4201_-4200insTCTATATATATATA	VIM	ENSG00000026025.16	transcript	ENST00000544301.7	protein_coding		3769		chr10	TogoVar
VIM_chr10_17223241_17242593	17224471	C C	CTCTCTAT others(7): Show CTCTCTATATATATA	upstream_gene_variant upstream_gene_variant	MODIFIER	HG00639.hp2 HG01361.hp1 HG01928.hp2 others(6): Show HG00639.hp2 HG01361.hp1 HG01928.hp2 HG02109.hp1 HG02273.hp1 HG02615.hp1 NA18946.hp1 NA19010.hp1 NA19064.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0002 a0001c0001t0008 a0001c0001t0001 a0001c0001t0002 a0001c0001t0008	a0001c0001t0001g0001 a0001c0001t0001g0015 a0001c0001t0001g0063 others(3): Show a0001c0001t0001g0001 a0001c0001t0001g0015 a0001c0001t0001g0063 a0001c0001t0002g0031 a0001c0001t0008g0001 a0001c0001t0008g0064	9	48	0.1875	14	c.-42 others(25): Show c.-4201_-4200insTCTCTATATATATA	VIM	ENSG00000026025.16	transcript	ENST00000544301.7	protein_coding		3769		chr10	TogoVar
VIM_chr10_17223241_17242593	17224471	C C	CTCTCTCT others(7): Show CTCTCTCTATATATA	upstream_gene_variant upstream_gene_variant	MODIFIER	HG02004.hp1 HG02080.hp2 HG02148.hp1 others(4): Show HG02004.hp1 HG02080.hp2 HG02148.hp1 NA18972.hp1 NA19009.hp2 NA19080.hp1 NA19080.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0008 a0001c0001t0001 a0001c0001t0008	a0001c0001t0001g0001 a0001c0001t0001g0015 a0001c0001t0001g0069 others(1): Show a0001c0001t0001g0001 a0001c0001t0001g0015 a0001c0001t0001g0069 a0001c0001t0008g0001	7	46	0.1522	14	c.-42 others(25): Show c.-4201_-4200insTCTCTCTATATATA	VIM	ENSG00000026025.16	transcript	ENST00000544301.7	protein_coding		3769		chr10	TogoVar
VIM_chr10_17223241_17242593	17224471	C C	CTCTCTCT others(7): Show CTCTCTCTCTATATA	upstream_gene_variant upstream_gene_variant	MODIFIER	HG01081.hp2 HG01081.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0005 a0001c0001t0001g0005	1	40	0.0250	14	c.-42 others(25): Show c.-4201_-4200insTCTCTCTCTATATA	VIM	ENSG00000026025.16	transcript	ENST00000544301.7	protein_coding		3769		chr10	TogoVar
VIPAS39_chr14_77421675_77462601	77429450	G G	GGCTAACA others(7): Show GGCTAACAGCTCACA	intron_variant intron_variant	MODIFIER	HG01109.hp1 HG02451.hp2 HG02572.hp2 others(9): Show HG01109.hp1 HG02451.hp2 HG02572.hp2 HG02630.hp2 HG02809.hp1 HG02897.hp1 HG03209.hp1 HG03471.hp2 HG03516.hp1 HG06807.hp1 NA18522.hp1 NA19030.hp2	a0001 a0001	a0001c0002 a0001c0002	a0001c0002t0001 a0001c0002t0007 a0001c0002t0001 a0001c0002t0007	a0001c0002t0001g0011 a0001c0002t0001g0028 a0001c0002t0001g0029 others(7): Show a0001c0002t0001g0011 a0001c0002t0001g0028 a0001c0002t0001g0029 a0001c0002t0001g0030 a0001c0002t0001g0031 a0001c0002t0001g0032 a0001c0002t0001g0034 a0001c0002t0001g0035 a0001c0002t0001g0037 a0001c0002t0007g0033	12	242	0.0496	14	c.126 others(31): Show c.1266+230_1266+231insTGTGAGCTGTTAGC	VIPAS39	ENSG00000151445.16	transcript	ENST00000557658.6	protein_coding	17/19			chr14	TogoVar
VIPAS39_chr14_77421675_77462601	77447965	C C	CTTTTTTT others(7): Show CTTTTTTTTTTTTTT	intron_variant intron_variant	MODIFIER	NA19030.hp2 NA19030.hp2	a0001 a0001	a0001c0002 a0001c0002	a0001c0002t0001 a0001c0002t0001	a0001c0002t0001g0028 a0001c0002t0001g0028	1	231	0.0043	14	c.504 others(29): Show c.504+528_504+529insAAAAAAAAAAAAAA	VIPAS39	ENSG00000151445.16	transcript	ENST00000557658.6	protein_coding	7/19			chr14	TogoVar
VIPR1_chr3_42497643_42542568	42507956	C C	CAAAAAAA others(7): Show CAAAAAAAAAAAAAA	intron_variant intron_variant	MODIFIER	HG00280.hp2 HG03490.hp2 HG00280.hp2 HG03490.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0002 a0001c0001t0016 a0001c0001t0002 a0001c0001t0016	a0001c0001t0002g0065 a0001c0001t0016g0064 a0001c0001t0002g0065 a0001c0001t0016g0064	2	32	0.0625	14	c.78+ others(29): Show c.78+5148_78+5161dupAAAAAAAAAAAAAA	VIPR1	ENSG00000114812.13	transcript	ENST00000325123.5	protein_coding	1/12		INFO_REALIGN_3_PRIME	chr3	TogoVar
VIPR1_chr3_42497643_42542568	42514541	C C	CCACACAC others(7): Show CCACACACACACACA	intron_variant intron_variant	MODIFIER	HG03209.hp1 HG03225.hp1 HG03209.hp1 HG03225.hp1	a0001 a0006 a0001 a0006	a0001c0002 a0006c0012 a0001c0002 a0006c0012	a0001c0002t0002 a0006c0012t0002 a0001c0002t0002 a0006c0012t0002	a0001c0002t0002g0011 a0006c0012t0002g0011 a0001c0002t0002g0011 a0006c0012t0002g0011	2	231	0.0087	14	c.184 others(29): Show c.184+706_184+719dupCACACACACACACA	VIPR1	ENSG00000114812.13	transcript	ENST00000325123.5	protein_coding	2/12		INFO_REALIGN_3_PRIME	chr3	TogoVar
VIPR1_chr3_42497643_42542568	42522080	A A	AATATATA others(7): Show AATATATATATATAT	intron_variant intron_variant	MODIFIER	HG02257.hp2 HG03453.hp2 NA19009.hp2 HG02257.hp2 HG03453.hp2 NA19009.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0002 a0001c0001t0003 a0001c0001t0002 a0001c0001t0003	a0001c0001t0002g0111 a0001c0001t0002g0312 a0001c0001t0003g0094 a0001c0001t0002g0111 a0001c0001t0002g0312 a0001c0001t0003g0094	3	329	0.0091	14	c.292 others(31): Show c.292+2759_292+2772dupATATATATATATAT	VIPR1	ENSG00000114812.13	transcript	ENST00000325123.5	protein_coding	3/12		INFO_REALIGN_3_PRIME	chr3	TogoVar
VIPR2_chr7_159023175_159149867	159129336	G G	GGGGGGGA others(7): Show GGGGGGGACAGGGCT	intron_variant intron_variant	MODIFIER	HG02723.hp2 HG02723.hp2	a0001 a0001	a0001c0005 a0001c0005	a0001c0005t0013 a0001c0005t0013	a0001c0005t0013g0155 a0001c0005t0013g0155	1	334	0.0030	14	c.151 others(33): Show c.151+13109_151+13110insAGCCCTGTCCCCCC	VIPR2	ENSG00000106018.14	transcript	ENST00000262178.7	protein_coding	2/12			chr7	TogoVar
VIPR2_chr7_159023175_159149867	159129392	G G	GGGGGGGA others(7): Show GGGGGGGACAGGGCT	intron_variant intron_variant	MODIFIER	HG00140.hp2 HG00673.hp2 HG01361.hp1 others(20): Show HG00140.hp2 HG00673.hp2 HG01361.hp1 HG01884.hp1 HG01952.hp1 HG02109.hp1 HG02109.hp2 HG02257.hp1 HG02280.hp2 HG02615.hp1 HG02647.hp1 HG02895.hp1 HG02922.hp1 HG02965.hp1 HG02970.hp1 HG02976.hp1 HG03041.hp1 HG03139.hp2 HG03486.hp2 HG03579.hp1 HG03669.hp1 HG06807.hp1 NA20129.hp2	a0001 a0002 a0001 a0002	a0001c0001 a0001c0004 a0001c0005 others(6): Show a0001c0001 a0001c0004 a0001c0005 a0001c0009 a0001c0025 a0001c0027 a0001c0029 a0002c0018 a0002c0024	a0001c0001t0001 a0001c0004t0004 a0001c0004t0007 others(11): Show a0001c0001t0001 a0001c0004t0004 a0001c0004t0007 a0001c0004t0011 a0001c0004t0039 a0001c0005t0008 a0001c0005t0013 a0001c0009t0043 a0001c0025t0006 a0001c0027t0006 a0001c0029t0008 a0002c0018t0004 a0002c0018t0014 a0002c0024t0051	a0001c0001t0001g0101 a0001c0004t0004g0021 a0001c0004t0004g0180 others(20): Show a0001c0001t0001g0101 a0001c0004t0004g0021 a0001c0004t0004g0180 a0001c0004t0004g0181 a0001c0004t0004g0182 a0001c0004t0004g0209 a0001c0004t0004g0306 a0001c0004t0004g0307 a0001c0004t0007g0179 a0001c0004t0011g0169 a0001c0004t0039g0153 a0001c0005t0008g0008 a0001c0005t0008g0310 a0001c0005t0008g0311 a0001c0005t0008g0312 a0001c0005t0013g0313 a0001c0009t0043g0024 a0001c0025t0006g0074 a0001c0027t0006g0190 a0001c0029t0008g0022 a0002c0018t0004g0303 a0002c0018t0014g0152 a0002c0024t0051g0072	23	331	0.0695	14	c.151 others(33): Show c.151+13053_151+13054insAGCCCTGTCCCCCC	VIPR2	ENSG00000106018.14	transcript	ENST00000262178.7	protein_coding	2/12			chr7	TogoVar
VIPR2_chr7_159023175_159149867	159129448	G G	GGGGGGGA others(7): Show GGGGGGGACAGGGCT	intron_variant intron_variant	MODIFIER	HG01884.hp2 HG01884.hp2	a0001 a0001	a0001c0005 a0001c0005	a0001c0005t0022 a0001c0005t0022	a0001c0005t0022g0285 a0001c0005t0022g0285	1	331	0.0030	14	c.151 others(33): Show c.151+12997_151+12998insAGCCCTGTCCCCCC	VIPR2	ENSG00000106018.14	transcript	ENST00000262178.7	protein_coding	2/12			chr7	TogoVar
VIPR2_chr7_159023175_159149867	159129506	C C	CGGGGACA others(7): Show CGGGGACAGGGCTGG	intron_variant intron_variant	MODIFIER	HG02723.hp2 HG02723.hp2	a0001 a0001	a0001c0005 a0001c0005	a0001c0005t0013 a0001c0005t0013	a0001c0005t0013g0155 a0001c0005t0013g0155	1	273	0.0037	14	c.151 others(33): Show c.151+12939_151+12940insCCAGCCCTGTCCCC	VIPR2	ENSG00000106018.14	transcript	ENST00000262178.7	protein_coding	2/12			chr7	TogoVar
VIPR2_chr7_159023175_159149867	159129616	G G	GGGGGGGA others(7): Show GGGGGGGACAGGGCT	intron_variant intron_variant	MODIFIER	HG02723.hp2 HG02818.hp2 HG02886.hp1 others(2): Show HG02723.hp2 HG02818.hp2 HG02886.hp1 NA19030.hp1 NA21309.hp2	a0001 a0002 a0001 a0002	a0001c0005 a0001c0016 a0002c0011 a0001c0005 a0001c0016 a0002c0011	a0001c0005t0013 a0001c0016t0050 a0002c0011t0014 a0001c0005t0013 a0001c0016t0050 a0002c0011t0014	a0001c0005t0013g0155 a0001c0016t0050g0125 a0002c0011t0014g0010 others(2): Show a0001c0005t0013g0155 a0001c0016t0050g0125 a0002c0011t0014g0010 a0002c0011t0014g0025 a0002c0011t0014g0077	5	334	0.0150	14	c.151 others(33): Show c.151+12829_151+12830insAGCCCTGTCCCCCC	VIPR2	ENSG00000106018.14	transcript	ENST00000262178.7	protein_coding	2/12			chr7	TogoVar
VIPR2_chr7_159023175_159149867	159129672	G G	GGGGGGGA others(7): Show GGGGGGGACAGGGCT	intron_variant intron_variant	MODIFIER	HG02683.hp2 HG02683.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0221 a0001c0001t0001g0221	1	334	0.0030	14	c.151 others(33): Show c.151+12773_151+12774insAGCCCTGTCCCCCC	VIPR2	ENSG00000106018.14	transcript	ENST00000262178.7	protein_coding	2/12			chr7	TogoVar
VIPR2_chr7_159023175_159149867	159135004	G G	GTTTTTTT others(7): Show GTTTTTTTTTTTTTT	intron_variant intron_variant	MODIFIER	HG03654.hp2 NA19004.hp2 NA19080.hp2 HG03654.hp2 NA19004.hp2 NA19080.hp2	a0001 a0001	a0001c0001 a0001c0003 a0001c0001 a0001c0003	a0001c0001t0046 a0001c0003t0001 a0001c0003t0003 a0001c0001t0046 a0001c0003t0001 a0001c0003t0003	a0001c0001t0046g0283 a0001c0003t0001g0139 a0001c0003t0003g0096 a0001c0001t0046g0283 a0001c0003t0001g0139 a0001c0003t0003g0096	3	230	0.0130	14	c.151 others(31): Show c.151+7428_151+7441dupAAAAAAAAAAAAAA	VIPR2	ENSG00000106018.14	transcript	ENST00000262178.7	protein_coding	2/12			chr7	TogoVar
VIRMA_chr8_94482689_94558469	94556364	T T	TTATATAT others(7): Show TTATATATATATATA	upstream_gene_variant upstream_gene_variant	MODIFIER	HG00438.hp1 HG00597.hp2 HG01256.hp2 others(10): Show HG00438.hp1 HG00597.hp2 HG01256.hp2 HG01257.hp1 HG01258.hp2 HG02145.hp2 HG02451.hp2 HG02723.hp2 HG03017.hp2 NA18612.hp2 NA19057.hp2 NA19084.hp2 NA19090.hp1	a0001 a0001	a0001c0001 a0001c0002 a0001c0005 a0001c0001 a0001c0002 a0001c0005	a0001c0001t0001 a0001c0002t0001 a0001c0005t0003 a0001c0001t0001 a0001c0002t0001 a0001c0005t0003	a0001c0001t0001g0001 a0001c0001t0001g0019 a0001c0001t0001g0260 others(8): Show a0001c0001t0001g0001 a0001c0001t0001g0019 a0001c0001t0001g0260 a0001c0001t0001g0261 a0001c0001t0001g0270 a0001c0001t0001g0271 a0001c0001t0001g0273 a0001c0001t0001g0280 a0001c0001t0001g0283 a0001c0002t0001g0161 a0001c0005t0003g0296	13	97	0.1340	14	c.-29 others(25): Show c.-2918_-2917insTATATATATATATA	VIRMA	ENSG00000164944.12	transcript	ENST00000297591.10	protein_coding		2896		chr8	TogoVar
VIT_chr2_36691707_36819794	36765414	C C	CGAGAGAG others(7): Show CGAGAGAGAGAGAGA	intron_variant intron_variant	MODIFIER	NA18906.hp2 NA18972.hp1 NA19063.hp2 NA18906.hp2 NA18972.hp1 NA19063.hp2	a0003 a0003	a0003c0003 a0003c0007 a0003c0003 a0003c0007	a0003c0003t0001 a0003c0007t0001 a0003c0003t0001 a0003c0007t0001	a0003c0003t0001g0047 a0003c0003t0001g0051 a0003c0007t0001g0013 a0003c0003t0001g0047 a0003c0003t0001g0051 a0003c0007t0001g0013	3	84	0.0357	14	c.488 others(31): Show c.488-1673_488-1660dupGAGAGAGAGAGAGA	VIT	ENSG00000205221.13	transcript	ENST00000379242.8	protein_coding	6/15		INFO_REALIGN_3_PRIME	chr2	TogoVar
VKORC1L1_chr7_65868074_65964558	65895516	T T	TACACACA others(7): Show TACACACACACACAC	intron_variant intron_variant	MODIFIER	NA19063.hp2 NA19063.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0017 a0001c0001t0017	a0001c0001t0017g0093 a0001c0001t0017g0093	1	180	0.0056	14	c.194 others(33): Show c.194+21961_194+21974dupCACACACACACACA	VKORC1L1	ENSG00000196715.7	transcript	ENST00000360768.5	protein_coding	1/2		INFO_REALIGN_3_PRIME	chr7	TogoVar
VKORC1L1_chr7_65868074_65964558	65895516	T T	TATATATA others(7): Show TATATATATACACAC	intron_variant intron_variant	MODIFIER	HG02155.hp1 HG02155.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0017 a0001c0001t0017	a0001c0001t0017g0085 a0001c0001t0017g0085	1	180	0.0056	14	c.194 others(33): Show c.194+21952_194+21953insTATATATACACACA	VKORC1L1	ENSG00000196715.7	transcript	ENST00000360768.5	protein_coding	1/2		INFO_REALIGN_3_PRIME	chr7	TogoVar
VKORC1L1_chr7_65868074_65964558	65909737	T T	TGTGTGTG others(7): Show TGTGTGTGTGTGTGA	intron_variant intron_variant	MODIFIER	NA18998.hp1 NA19000.hp2 NA18998.hp1 NA19000.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0005 a0001c0001t0005	a0001c0001t0005g0293 a0001c0001t0005g0315 a0001c0001t0005g0293 a0001c0001t0005g0315	2	319	0.0063	14	c.194 others(33): Show c.194+36173_194+36174insTGTGTGTGTGTGAG	VKORC1L1	ENSG00000196715.7	transcript	ENST00000360768.5	protein_coding	1/2		INFO_REALIGN_3_PRIME	chr7	TogoVar
VLDLR_chr9_2616787_2665056	2633049	A A	AGTGTGTG others(7): Show AGTGTGTGTGTGTGT	intron_variant intron_variant	MODIFIER	HG01891.hp2 HG03209.hp1 HG01891.hp2 HG03209.hp1	a0001 a0002 a0001 a0002	a0001c0003 a0002c0002 a0001c0003 a0002c0002	a0001c0003t0094 a0002c0002t0044 a0001c0003t0094 a0002c0002t0044	a0001c0003t0094g0110 a0002c0002t0044g0289 a0001c0003t0094g0110 a0002c0002t0044g0289	2	110	0.0182	14	c.83- others(29): Show c.83-2403_83-2402insTGTGTGTGTGTGTG	VLDLR	ENSG00000147852.17	transcript	ENST00000382100.8	protein_coding	1/18		INFO_REALIGN_3_PRIME	chr9	TogoVar
VMAC_chr19_5899872_5915853	5907610	T T	TAAAAAAA others(7): Show TAAAAAAAAAAAAAA	intron_variant intron_variant	MODIFIER	HG01074.hp1 HG01081.hp1 HG01167.hp2 others(13): Show HG01074.hp1 HG01081.hp1 HG01167.hp2 HG01168.hp1 HG01169.hp1 HG01169.hp2 HG01346.hp2 HG02451.hp1 HG02602.hp2 HG02922.hp2 HG03491.hp1 HG03492.hp2 HG03834.hp2 NA18944.hp1 NA20805.hp1 NA21309.hp1	a0001 a0002 a0003 a0001 a0002 a0003	a0001c0001 a0001c0006 a0002c0002 others(1): Show a0001c0001 a0001c0006 a0002c0002 a0003c0003	a0001c0001t0001 a0001c0001t0033 a0001c0006t0019 others(2): Show a0001c0001t0001 a0001c0001t0033 a0001c0006t0019 a0002c0002t0004 a0003c0003t0001	a0001c0001t0001g0044 a0001c0001t0001g0071 a0001c0001t0033g0097 others(4): Show a0001c0001t0001g0044 a0001c0001t0001g0071 a0001c0001t0033g0097 a0001c0006t0019g0088 a0002c0002t0004g0008 a0002c0002t0004g0027 a0003c0003t0001g0044	16	70	0.2286	14	c.192 others(31): Show c.192-1201_192-1188dupAAAAAAAAAAAAAA	VMAC	ENSG00000187650.4	transcript	ENST00000339485.4	protein_coding	1/1		INFO_REALIGN_3_PRIME	chr19	TogoVar
VMP1_chr17_59702654_59847255	59772950	C C	CTTTTTTT others(7): Show CTTTTTTTTTTTTTT	intron_variant intron_variant	MODIFIER	NA19086.hp2 NA19086.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0003 a0001c0001t0003	a0001c0001t0003g0118 a0001c0001t0003g0118	1	17	0.0588	14	c.583 others(29): Show c.583-787_583-774dupTTTTTTTTTTTTTT	VMP1	ENSG00000062716.13	transcript	ENST00000262291.9	protein_coding	6/11		INFO_REALIGN_3_PRIME	chr17	TogoVar
VMP1_chr17_59702654_59847255	59784142	T T	TGTGTGTG others(7): Show TGTGTGTGTGTGTGA	intron_variant intron_variant	MODIFIER	NA18522.hp1 NA18522.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0002 a0001c0001t0002	a0001c0001t0002g0022 a0001c0001t0002g0022	1	30	0.0333	14	c.714 others(33): Show c.714+10258_714+10259insTGTGTGTGTGTGAG	VMP1	ENSG00000062716.13	transcript	ENST00000262291.9	protein_coding	7/11		INFO_REALIGN_3_PRIME	chr17	TogoVar
VMP1_chr17_59702654_59847255	59809484	A A	ATTTTTTT others(7): Show ATTTTTTTTTTTTTT	intron_variant intron_variant	MODIFIER	HG02258.hp2 HG03540.hp1 HG02258.hp2 HG03540.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0003 a0001c0001t0001g0278 a0001c0001t0001g0003 a0001c0001t0001g0278	2	28	0.0714	14	c.795 others(29): Show c.795+635_795+648dupTTTTTTTTTTTTTT	VMP1	ENSG00000062716.13	transcript	ENST00000262291.9	protein_coding	8/11		INFO_REALIGN_3_PRIME	chr17	TogoVar
VN1R1_chr19_57449790_57462140	57457933	A A	AGTGTGTG others(7): Show AGTGTGTGTGTGTGT	upstream_gene_variant upstream_gene_variant	MODIFIER	HG00140.hp2 HG00423.hp1 HG00621.hp2 others(27): Show HG00140.hp2 HG00423.hp1 HG00621.hp2 HG00673.hp1 HG00733.hp2 HG01099.hp1 HG01167.hp2 HG01243.hp2 HG01975.hp1 HG02071.hp2 HG02135.hp1 HG02135.hp2 HG02280.hp2 HG02615.hp2 HG02647.hp2 HG03017.hp2 HG03098.hp1 HG03209.hp1 HG03490.hp2 HG03492.hp2 HG03710.hp1 NA18978.hp2 NA18999.hp2 NA19030.hp2 NA19054.hp2 NA19056.hp1 NA19057.hp1 NA19058.hp2 NA19065.hp2 NA19077.hp2	a0001 a0002 a0001 a0002	a0001c0001 a0002c0002 a0001c0001 a0002c0002	a0001c0001t0001 a0001c0001t0002 a0002c0002t0001 others(1): Show a0001c0001t0001 a0001c0001t0002 a0002c0002t0001 a0002c0002t0003	a0001c0001t0001g0000 a0001c0001t0002g0000 a0002c0002t0001g0000 others(1): Show a0001c0001t0001g0000 a0001c0001t0002g0000 a0002c0002t0001g0000 a0002c0002t0003g0000	30	112	0.2679	14	c.-14 others(25): Show c.-1448_-1447insACACACACACACAC	VN1R1	ENSG00000178201.5	transcript	ENST00000321039.5	protein_coding		794		chr19	TogoVar
VNN1_chr6_132675849_132719055	132717176	A A	AAAAAAAA others(7): Show AAAAAAAAAAGAAAG	upstream_gene_variant upstream_gene_variant	MODIFIER	HG00140.hp2 HG00673.hp2 HG01433.hp1 others(22): Show HG00140.hp2 HG00673.hp2 HG01433.hp1 HG02027.hp2 HG02056.hp2 HG02071.hp1 HG02083.hp1 HG02155.hp1 HG02155.hp2 HG02523.hp2 NA18960.hp2 NA18965.hp1 NA18972.hp2 NA18979.hp2 NA18982.hp2 NA18985.hp2 NA18986.hp2 NA18995.hp2 NA18997.hp1 NA19003.hp1 NA19011.hp2 NA19066.hp1 NA19082.hp1 NA19082.hp2 NA19088.hp2	a0001 a0002 a0003 others(1): Show a0001 a0002 a0003 a0009	a0001c0001 a0002c0002 a0003c0003 others(1): Show a0001c0001 a0002c0002 a0003c0003 a0009c0009	a0001c0001t0001 a0002c0002t0003 a0002c0002t0004 others(4): Show a0001c0001t0001 a0002c0002t0003 a0002c0002t0004 a0002c0002t0016 a0002c0002t0024 a0003c0003t0002 a0009c0009t0003	a0001c0001t0001g0002 a0001c0001t0001g0006 a0001c0001t0001g0018 others(14): Show a0001c0001t0001g0002 a0001c0001t0001g0006 a0001c0001t0001g0018 a0001c0001t0001g0201 a0002c0002t0003g0005 a0002c0002t0004g0004 a0002c0002t0004g0033 a0002c0002t0004g0069 a0002c0002t0004g0071 a0002c0002t0004g0078 a0002c0002t0016g0070 a0002c0002t0024g0075 a0003c0003t0002g0001 a0003c0003t0002g0057 a0003c0003t0002g0067 a0009c0009t0003g0053 a0009c0009t0003g0210	25	198	0.1263	14	c.-31 others(25): Show c.-3142_-3141insCTTTCTTTTTTTTT	VNN1	ENSG00000112299.8	transcript	ENST00000367928.5	protein_coding		3122		chr6	TogoVar
VOPP1_chr7_55465613_55577502	55516905	C C	CATATATA others(7): Show CATATATATATATAT	intron_variant intron_variant	MODIFIER	NA19078.hp2 NA19078.hp2	a0001 a0001	a0001c0002 a0001c0002	a0001c0002t0001 a0001c0002t0001	a0001c0002t0001g0189 a0001c0002t0001g0189	1	272	0.0037	14	c.113 others(31): Show c.113+4153_113+4166dupATATATATATATAT	VOPP1	ENSG00000154978.13	transcript	ENST00000285279.10	protein_coding	2/4			chr7	TogoVar
VOPP1_chr7_55465613_55577502	55564243	G G	GTCTCTCT others(7): Show GTCTCTCTCTCTCTC	intron_variant intron_variant	MODIFIER	HG01109.hp2 HG03130.hp2 HG03942.hp2 others(1): Show HG01109.hp2 HG03130.hp2 HG03942.hp2 HG04228.hp1	a0001 a0001	a0001c0001 a0001c0002 a0001c0001 a0001c0002	a0001c0001t0001 a0001c0001t0002 a0001c0002t0001 others(1): Show a0001c0001t0001 a0001c0001t0002 a0001c0002t0001 a0001c0002t0004	a0001c0001t0001g0080 a0001c0001t0002g0263 a0001c0002t0001g0184 others(1): Show a0001c0001t0001g0080 a0001c0001t0002g0263 a0001c0002t0001g0184 a0001c0002t0004g0207	4	46	0.0870	14	c.54+ others(29): Show c.54+8014_54+8027dupGAGAGAGAGAGAGA	VOPP1	ENSG00000154978.13	transcript	ENST00000285279.10	protein_coding	1/4			chr7	TogoVar
VOPP1_chr7_55465613_55577502	55564243	G G	GTCTCTGT others(7): Show GTCTCTGTCTCTCTC	intron_variant intron_variant	MODIFIER	HG01109.hp1 HG02630.hp1 HG01109.hp1 HG02630.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0002 a0001c0001t0001 a0001c0001t0002	a0001c0001t0001g0128 a0001c0001t0002g0203 a0001c0001t0001g0128 a0001c0001t0002g0203	2	44	0.0455	14	c.54+ others(29): Show c.54+8027_54+8028insGAGAGAGACAGAGA	VOPP1	ENSG00000154978.13	transcript	ENST00000285279.10	protein_coding	1/4			chr7	TogoVar
VPREB3_chr22_23747743_23759425	23754752	G G	GCGCGCAC others(7): Show GCGCGCACACACACA	upstream_gene_variant upstream_gene_variant	MODIFIER	NA18959.hp1 NA19056.hp1 NA19080.hp2 others(1): Show NA18959.hp1 NA19056.hp1 NA19080.hp2 NA19089.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0002 a0001c0001t0001g0002	4	320	0.0125	14	c.-39 others(23): Show c.-390_-389insTGTGTGTGTGCGCG	VPREB3	ENSG00000128218.8	transcript	ENST00000248948.4	protein_coding		328		chr22	TogoVar
VPREB3_chr22_23747743_23759425	23754752	G G	GCGCGCGC others(7): Show GCGCGCGCGCACACA	upstream_gene_variant upstream_gene_variant	MODIFIER	NA19043.hp1 NA19043.hp1	a0001 a0001	a0001c0007 a0001c0007	a0001c0007t0001 a0001c0007t0001	a0001c0007t0001g0026 a0001c0007t0001g0026	1	317	0.0032	14	c.-39 others(23): Show c.-390_-389insTGTGTGCGCGCGCG	VPREB3	ENSG00000128218.8	transcript	ENST00000248948.4	protein_coding		328		chr22	TogoVar
VPREB3_chr22_23747743_23759425	23754752	G G	GCGCGCGC others(7): Show GCGCGCGCGCGCACA	upstream_gene_variant upstream_gene_variant	MODIFIER	HG03486.hp1 HG03486.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0004 a0001c0001t0001g0004	1	317	0.0032	14	c.-39 others(23): Show c.-390_-389insTGTGCGCGCGCGCG	VPREB3	ENSG00000128218.8	transcript	ENST00000248948.4	protein_coding		328		chr22	TogoVar
VPS13A_chr9_77172534_77426537	77206327	T T	TTATATAT others(7): Show TTATATATATATATA	intron_variant intron_variant	MODIFIER	HG03017.hp2 NA19085.hp1 HG03017.hp2 NA19085.hp1	a0001 a0008 a0001 a0008	a0001c0002 a0008c0017 a0001c0002 a0008c0017	a0001c0002t0001 a0008c0017t0001 a0001c0002t0001 a0008c0017t0001	a0001c0002t0001g0261 a0008c0017t0001g0330 a0001c0002t0001g0261 a0008c0017t0001g0330	2	176	0.0114	14	c.385 others(29): Show c.385+249_385+250insATATATATATATAT	VPS13A	ENSG00000197969.14	transcript	ENST00000360280.8	protein_coding	5/71		INFO_REALIGN_3_PRIME	chr9	TogoVar
VPS13A_chr9_77172534_77426537	77207213	T T	TTATATAT others(7): Show TTATATATATATATA	intron_variant intron_variant	MODIFIER	HG01109.hp2 HG03669.hp2 NA18747.hp1 others(6): Show HG01109.hp2 HG03669.hp2 NA18747.hp1 NA18980.hp1 NA18999.hp2 NA19000.hp2 NA19011.hp1 NA19085.hp2 NA19086.hp2	a0001 a0001	a0001c0001 a0001c0003 a0001c0001 a0001c0003	a0001c0001t0002 a0001c0001t0006 a0001c0001t0008 others(2): Show a0001c0001t0002 a0001c0001t0006 a0001c0001t0008 a0001c0001t0026 a0001c0003t0004	a0001c0001t0002g0085 a0001c0001t0002g0086 a0001c0001t0002g0104 others(6): Show a0001c0001t0002g0085 a0001c0001t0002g0086 a0001c0001t0002g0104 a0001c0001t0002g0108 a0001c0001t0002g0109 a0001c0001t0006g0094 a0001c0001t0008g0144 a0001c0001t0026g0118 a0001c0003t0004g0334	9	152	0.0592	14	c.385 others(31): Show c.385+1161_385+1174dupTATATATATATATA	VPS13A	ENSG00000197969.14	transcript	ENST00000360280.8	protein_coding	5/71		INFO_REALIGN_3_PRIME	chr9	TogoVar
VPS13A_chr9_77172534_77426537	77207213	T T	TTTTATAT others(7): Show TTTTATATATATATA	intron_variant intron_variant	MODIFIER	HG03453.hp1 HG03453.hp1	a0004 a0004	a0004c0009 a0004c0009	a0004c0009t0011 a0004c0009t0011	a0004c0009t0011g0181 a0004c0009t0011g0181	1	144	0.0069	14	c.385 others(31): Show c.385+1135_385+1136insTTATATATATATAT	VPS13A	ENSG00000197969.14	transcript	ENST00000360280.8	protein_coding	5/71		INFO_REALIGN_3_PRIME	chr9	TogoVar
VPS13A_chr9_77172534_77426537	77207252	T T	TATATATA others(7): Show TATATATATATATTA	intron_variant intron_variant	MODIFIER	NA19066.hp2 NA19066.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0025 a0001c0001t0025	a0001c0001t0025g0206 a0001c0001t0025g0206	1	210	0.0048	14	c.385 others(31): Show c.385+1174_385+1175insTATATATATATTAA	VPS13A	ENSG00000197969.14	transcript	ENST00000360280.8	protein_coding	5/71		INFO_REALIGN_3_PRIME	chr9	TogoVar
VPS13A_chr9_77172534_77426537	77306401	A A	AGAGAGAG others(7): Show AGAGAGAGTGTGTGT	intron_variant intron_variant	MODIFIER	NA18906.hp2 NA18906.hp2	a0001 a0001	a0001c0008 a0001c0008	a0001c0008t0010 a0001c0008t0010	a0001c0008t0010g0195 a0001c0008t0010g0195	1	327	0.0031	14	c.396 others(33): Show c.3961-1543_3961-1542insAGAGAGTGTGTGTG	VPS13A	ENSG00000197969.14	transcript	ENST00000360280.8	protein_coding	34/71		INFO_REALIGN_3_PRIME	chr9	TogoVar
VPS13A_chr9_77172534_77426537	77306414	T T	TTGTGTGT others(7): Show TTGTGTGTGTGTGTG	intron_variant intron_variant	MODIFIER	HG01346.hp1 HG02148.hp1 NA19000.hp1 HG01346.hp1 HG02148.hp1 NA19000.hp1	a0001 a0001	a0001c0001 a0001c0002 a0001c0001 a0001c0002	a0001c0001t0003 a0001c0002t0001 a0001c0002t0006 a0001c0001t0003 a0001c0002t0001 a0001c0002t0006	a0001c0001t0003g0288 a0001c0002t0001g0321 a0001c0002t0006g0187 a0001c0001t0003g0288 a0001c0002t0001g0321 a0001c0002t0006g0187	3	100	0.0300	14	c.396 others(33): Show c.3961-1509_3961-1496dupGTGTGTGTGTGTGT	VPS13A	ENSG00000197969.14	transcript	ENST00000360280.8	protein_coding	34/71		INFO_REALIGN_3_PRIME	chr9	TogoVar
VPS13A_chr9_77172534_77426537	77341691	C C	CTTTTTTT others(7): Show CTTTTTTTTTTTTTT	intron_variant intron_variant	MODIFIER	HG01884.hp1 HG02280.hp1 HG01884.hp1 HG02280.hp1	a0001 a0001	a0001c0008 a0001c0008	a0001c0008t0010 a0001c0008t0010	a0001c0008t0010g0193 a0001c0008t0010g0196 a0001c0008t0010g0193 a0001c0008t0010g0196	2	58	0.0345	14	c.702 others(33): Show c.7026+1157_7026+1170dupTTTTTTTTTTTTTT	VPS13A	ENSG00000197969.14	transcript	ENST00000360280.8	protein_coding	50/71		INFO_REALIGN_3_PRIME	chr9	TogoVar
VPS13A_chr9_77172534_77426537	77400223	A A	ATTTTTTT others(7): Show ATTTTTTTTTTTTTT	intron_variant intron_variant	MODIFIER	HG02622.hp2 HG02622.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0007 a0001c0001t0007	a0001c0001t0007g0211 a0001c0001t0007g0211	1	124	0.0081	14	c.919 others(33): Show c.9190-3004_9190-2991dupTTTTTTTTTTTTTT	VPS13A	ENSG00000197969.14	transcript	ENST00000360280.8	protein_coding	68/71		INFO_REALIGN_3_PRIME	chr9	TogoVar
VPS13A_chr9_77172534_77426537	77411660	C C	CAAAAAAA others(7): Show CAAAAAAAAAAAAAA	intron_variant intron_variant	MODIFIER	HG01070.hp1 HG01071.hp2 HG01074.hp1 others(13): Show HG01070.hp1 HG01071.hp2 HG01074.hp1 HG01167.hp2 HG01175.hp2 HG01192.hp2 HG03098.hp2 HG03130.hp1 HG03225.hp1 HG03471.hp2 NA19001.hp1 NA19004.hp2 NA19063.hp2 NA20129.hp2 NA20905.hp2 NA21309.hp1	a0001 a0009 a0001 a0009	a0001c0003 a0001c0005 a0001c0006 others(3): Show a0001c0003 a0001c0005 a0001c0006 a0001c0014 a0001c0026 a0009c0021	a0001c0003t0004 a0001c0005t0005 a0001c0006t0005 others(5): Show a0001c0003t0004 a0001c0005t0005 a0001c0006t0005 a0001c0006t0012 a0001c0014t0024 a0001c0014t0032 a0001c0026t0005 a0009c0021t0004	a0001c0003t0004g0232 a0001c0005t0005g0016 a0001c0005t0005g0026 others(13): Show a0001c0003t0004g0232 a0001c0005t0005g0016 a0001c0005t0005g0026 a0001c0005t0005g0030 a0001c0005t0005g0031 a0001c0005t0005g0032 a0001c0005t0005g0035 a0001c0005t0005g0036 a0001c0006t0005g0015 a0001c0006t0012g0002 a0001c0006t0012g0027 a0001c0006t0012g0028 a0001c0014t0024g0004 a0001c0014t0032g0006 a0001c0026t0005g0034 a0009c0021t0004g0236	16	102	0.1569	14	c.947 others(33): Show c.9474+4065_9474+4078dupAAAAAAAAAAAAAA	VPS13A	ENSG00000197969.14	transcript	ENST00000360280.8	protein_coding	71/71		INFO_REALIGN_3_PRIME	chr9	TogoVar
VPS13B_chr8_99008274_99882580	99014110	C C	CTTTTTTT others(7): Show CTTTTTTTTTTTTTT	intron_variant intron_variant	MODIFIER	HG02145.hp1 HG02145.hp1	a0003 a0003	a0003c0005 a0003c0005	a0003c0005t0006 a0003c0005t0006	a0003c0005t0006g0131 a0003c0005t0006g0131	1	61	0.0164	14	c.147 others(29): Show c.147+187_147+200dupTTTTTTTTTTTTTT	VPS13B	ENSG00000132549.20	transcript	ENST00000357162.7	protein_coding	2/61		INFO_REALIGN_3_PRIME	chr8	TogoVar
VPS13B_chr8_99008274_99882580	99326452	C C	CTTTTTTT others(7): Show CTTTTTTTTTTTTTT	intron_variant intron_variant	MODIFIER	HG02040.hp2 HG03579.hp1 NA19065.hp1 HG02040.hp2 HG03579.hp1 NA19065.hp1	a0002 a0005 a0002 a0005	a0002c0003 a0005c0009 a0002c0003 a0005c0009	a0002c0003t0003 a0005c0009t0006 a0002c0003t0003 a0005c0009t0006	a0002c0003t0003g0080 a0002c0003t0003g0086 a0005c0009t0006g0119 a0002c0003t0003g0080 a0002c0003t0003g0086 a0005c0009t0006g0119	3	36	0.0833	14	c.282 others(35): Show c.2824+51215_2824+51228dupTTTTTTTTTTTTTT	VPS13B	ENSG00000132549.20	transcript	ENST00000357162.7	protein_coding	19/61		INFO_REALIGN_3_PRIME	chr8	TogoVar

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