Joint Open Genome and Omics Platform (JoGo)

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Snpeff annotation impact detail

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regionname	pos	ref	alt	annotation	impact	samples	ahapids	chapids	thapids	thapids	ac	an	af	len	hgvs_c	genename	geneid	featuretype	featureid	transcript_biotype	rank	distance	status	chr	external
LRBA_chr4_150259435_151020284	150694462	C C	CAAAAAAA others(8): Show CAAAAAAAAAAAAAAA	intron_variant intron_variant	MODIFIER	HG00423.hp2 HG00621.hp2 HG00733.hp2 others(34): Show HG00423.hp2 HG00621.hp2 HG00733.hp2 HG00735.hp2 HG00738.hp2 HG01167.hp1 HG01243.hp2 HG01255.hp1 HG01515.hp2 HG01517.hp2 HG01891.hp1 HG01934.hp2 HG02129.hp2 HG02132.hp2 HG02280.hp2 HG02559.hp1 HG02723.hp1 HG02886.hp2 HG03491.hp2 HG03516.hp2 HG03579.hp2 HG03654.hp2 NA18522.hp1 NA18612.hp1 NA18939.hp2 NA18948.hp2 NA18952.hp1 NA18957.hp1 NA18962.hp2 NA18966.hp1 NA18970.hp2 NA18984.hp1 NA19007.hp1 NA19011.hp2 NA19060.hp1 NA19062.hp2 NA19088.hp2	a0001 a0003 a0009 others(4): Show a0001 a0003 a0009 a0013 a0015 a0018 a0021	a0001c0001 a0001c0005 a0003c0004 others(7): Show a0001c0001 a0001c0005 a0003c0004 a0003c0012 a0003c0023 a0009c0009 a0013c0039 a0015c0028 a0018c0034 a0021c0033	a0001c0001t0001 a0001c0001t0002 a0001c0005t0001 others(8): Show a0001c0001t0001 a0001c0001t0002 a0001c0005t0001 a0003c0004t0003 a0003c0012t0003 a0003c0023t0003 a0009c0009t0003 a0013c0039t0001 a0015c0028t0003 a0018c0034t0003 a0021c0033t0001	a0001c0001t0001g0003 a0001c0001t0001g0005 a0001c0001t0001g0009 others(34): Show a0001c0001t0001g0003 a0001c0001t0001g0005 a0001c0001t0001g0009 a0001c0001t0001g0070 a0001c0001t0001g0071 a0001c0001t0001g0075 a0001c0001t0001g0077 a0001c0001t0001g0079 a0001c0001t0001g0081 a0001c0001t0001g0084 a0001c0001t0001g0085 a0001c0001t0001g0086 a0001c0001t0001g0087 a0001c0001t0001g0088 a0001c0001t0001g0091 a0001c0001t0001g0092 a0001c0001t0001g0093 a0001c0001t0001g0097 a0001c0001t0001g0108 a0001c0001t0001g0117 a0001c0001t0001g0119 a0001c0001t0001g0120 a0001c0001t0001g0121 a0001c0001t0001g0122 a0001c0001t0002g0076 a0001c0005t0001g0159 a0001c0005t0001g0160 a0003c0004t0003g0158 a0003c0004t0003g0161 a0003c0004t0003g0162 a0003c0012t0003g0089 a0003c0023t0003g0069 a0009c0009t0003g0008 a0013c0039t0001g0073 a0015c0028t0003g0118 a0018c0034t0003g0164 a0021c0033t0001g0074	37	180	0.2056	15	c.575 others(36): Show c.5755-10746_5755-10745insTTTTTTTTTTTTTTT	LRBA	ENSG00000198589.15	transcript	ENST00000651943.2	protein_coding	36/56			chr4	TogoVar
LRBA_chr4_150259435_151020284	150697325	G G	GAAAAAAA others(8): Show GAAAAAAAAAAAAAAA	intron_variant intron_variant	MODIFIER	HG03540.hp1 HG03540.hp1	a0002 a0002	a0002c0002 a0002c0002	a0002c0002t0003 a0002c0002t0003	a0002c0002t0003g0138 a0002c0002t0003g0138	1	180	0.0056	15	c.575 others(36): Show c.5755-13623_5755-13609dupTTTTTTTTTTTTTTT	LRBA	ENSG00000198589.15	transcript	ENST00000651943.2	protein_coding	36/56			chr4	TogoVar
LRBA_chr4_150259435_151020284	150717675	G G	GTAATAAT others(8): Show GTAATAATAATAATAA	intron_variant intron_variant	MODIFIER	HG00423.hp2 HG00544.hp2 HG00733.hp1 others(21): Show HG00423.hp2 HG00544.hp2 HG00733.hp1 HG00735.hp2 HG00738.hp1 HG01167.hp2 HG01515.hp2 HG01891.hp1 HG02027.hp1 HG02135.hp2 HG02723.hp1 HG02897.hp2 HG04115.hp1 HG04115.hp2 NA18522.hp1 NA18906.hp2 NA18959.hp1 NA18979.hp2 NA18986.hp1 NA19030.hp2 NA19043.hp1 NA19060.hp1 NA19088.hp2 homoSapiens_chm13v2.hp1	a0001 a0002 a0003 others(2): Show a0001 a0002 a0003 a0005 a0021	a0001c0001 a0001c0005 a0002c0002 others(5): Show a0001c0001 a0001c0005 a0002c0002 a0002c0015 a0003c0012 a0003c0035 a0005c0011 a0021c0033	a0001c0001t0001 a0001c0001t0003 a0001c0005t0001 others(8): Show a0001c0001t0001 a0001c0001t0003 a0001c0005t0001 a0002c0002t0001 a0002c0002t0003 a0002c0002t0007 a0002c0015t0003 a0003c0012t0003 a0003c0035t0003 a0005c0011t0001 a0021c0033t0001	a0001c0001t0001g0003 a0001c0001t0001g0014 a0001c0001t0001g0055 others(21): Show a0001c0001t0001g0003 a0001c0001t0001g0014 a0001c0001t0001g0055 a0001c0001t0001g0067 a0001c0001t0001g0080 a0001c0001t0001g0085 a0001c0001t0001g0087 a0001c0001t0001g0090 a0001c0001t0001g0091 a0001c0001t0001g0092 a0001c0001t0001g0094 a0001c0001t0001g0112 a0001c0001t0001g0119 a0001c0001t0003g0052 a0001c0005t0001g0004 a0002c0002t0001g0152 a0002c0002t0003g0135 a0002c0002t0007g0130 a0002c0015t0003g0061 a0003c0012t0003g0089 a0003c0035t0003g0154 a0005c0011t0001g0168 a0005c0011t0001g0169 a0021c0033t0001g0074	24	180	0.1333	15	c.575 others(36): Show c.5754+17568_5754+17582dupTTATTATTATTATTA	LRBA	ENSG00000198589.15	transcript	ENST00000651943.2	protein_coding	36/56			chr4	TogoVar
LRBA_chr4_150259435_151020284	150805285	G G	GAAGGAAA others(8): Show GAAGGAAAGGAAAGGA	intron_variant intron_variant	MODIFIER	HG00597.hp2 HG00738.hp1 HG01255.hp1 others(17): Show HG00597.hp2 HG00738.hp1 HG01255.hp1 HG02109.hp1 HG02647.hp1 HG02922.hp2 HG03453.hp1 HG03540.hp2 HG03579.hp1 NA18948.hp1 NA18959.hp1 NA18966.hp1 NA18966.hp2 NA18986.hp1 NA19030.hp1 NA19062.hp1 NA19091.hp1 NA19091.hp2 NA20129.hp1 NA20129.hp2	a0001 a0002 a0014 others(1): Show a0001 a0002 a0014 a0018	a0001c0001 a0001c0007 a0001c0017 others(5): Show a0001c0001 a0001c0007 a0001c0017 a0001c0032 a0001c0037 a0002c0003 a0014c0025 a0018c0034	a0001c0001t0001 a0001c0001t0002 a0001c0007t0003 others(6): Show a0001c0001t0001 a0001c0001t0002 a0001c0007t0003 a0001c0017t0010 a0001c0032t0001 a0001c0037t0003 a0002c0003t0001 a0014c0025t0002 a0018c0034t0003	a0001c0001t0001g0005 a0001c0001t0001g0014 a0001c0001t0001g0046 others(17): Show a0001c0001t0001g0005 a0001c0001t0001g0014 a0001c0001t0001g0046 a0001c0001t0001g0055 a0001c0001t0001g0082 a0001c0001t0001g0090 a0001c0001t0001g0153 a0001c0001t0002g0031 a0001c0001t0002g0036 a0001c0001t0002g0099 a0001c0001t0002g0105 a0001c0001t0002g0178 a0001c0007t0003g0165 a0001c0007t0003g0167 a0001c0017t0010g0136 a0001c0032t0001g0171 a0001c0037t0003g0175 a0002c0003t0001g0011 a0014c0025t0002g0172 a0018c0034t0003g0164	20	180	0.1111	15	c.551 others(32): Show c.5518+971_5518+985dupTCCTTTCCTTTCCTT	LRBA	ENSG00000198589.15	transcript	ENST00000651943.2	protein_coding	33/56			chr4	TogoVar
LRBA_chr4_150259435_151020284	150805446	G G	GGGAAAGG others(8): Show GGGAAAGGAAAGGAAA	intron_variant intron_variant	MODIFIER	HG00735.hp2 HG00738.hp1 HG02280.hp2 others(3): Show HG00735.hp2 HG00738.hp1 HG02280.hp2 NA18984.hp1 NA19007.hp1 NA20129.hp2	a0001 a0001	a0001c0001 a0001c0005 a0001c0007 a0001c0001 a0001c0005 a0001c0007	a0001c0001t0001 a0001c0005t0001 a0001c0007t0003 a0001c0001t0001 a0001c0005t0001 a0001c0007t0003	a0001c0001t0001g0009 a0001c0001t0001g0055 a0001c0001t0001g0085 others(3): Show a0001c0001t0001g0009 a0001c0001t0001g0055 a0001c0001t0001g0085 a0001c0001t0001g0121 a0001c0005t0001g0160 a0001c0007t0003g0165	6	180	0.0333	15	c.551 others(32): Show c.5518+810_5518+824dupTTTCCTTTCCTTTCC	LRBA	ENSG00000198589.15	transcript	ENST00000651943.2	protein_coding	33/56			chr4	TogoVar
LRBA_chr4_150259435_151020284	150805542	G G	GAAGGAAA others(8): Show GAAGGAAAGGAAAGGA	intron_variant intron_variant	MODIFIER	HG02486.hp2 HG02572.hp2 HG03041.hp1 others(1): Show HG02486.hp2 HG02572.hp2 HG03041.hp1 NA18948.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0002 a0001c0001t0001 a0001c0001t0002	a0001c0001t0001g0016 a0001c0001t0001g0027 a0001c0001t0001g0046 others(1): Show a0001c0001t0001g0016 a0001c0001t0001g0027 a0001c0001t0001g0046 a0001c0001t0002g0107	4	180	0.0222	15	c.551 others(32): Show c.5518+714_5518+728dupTCCTTTCCTTTCCTT	LRBA	ENSG00000198589.15	transcript	ENST00000651943.2	protein_coding	33/56			chr4	TogoVar
LRBA_chr4_150259435_151020284	151008988	A A	AAAAAAAA others(8): Show AAAAAAAAAAAAAAAT	intron_variant intron_variant	MODIFIER	HG02165.hp1 HG02165.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0002 a0001c0001t0002	a0001c0001t0002g0034 a0001c0001t0002g0034	1	180	0.0056	15	c.216 others(32): Show c.216+5438_216+5439insATTTTTTTTTTTTTT	LRBA	ENSG00000198589.15	transcript	ENST00000651943.2	protein_coding	2/56			chr4	TogoVar
LRBA_chr4_150259435_151020284	151008988	A A	AAAAAAAA others(8): Show AAAAAAAAAAAAATAT	intron_variant intron_variant	MODIFIER	HG03540.hp2 NA18959.hp2 NA19068.hp1 HG03540.hp2 NA18959.hp2 NA19068.hp1	a0001 a0022 a0001 a0022	a0001c0001 a0022c0030 a0001c0001 a0022c0030	a0001c0001t0002 a0001c0001t0004 a0022c0030t0002 a0001c0001t0002 a0001c0001t0004 a0022c0030t0002	a0001c0001t0002g0031 a0001c0001t0004g0104 a0022c0030t0002g0044 a0001c0001t0002g0031 a0001c0001t0004g0104 a0022c0030t0002g0044	3	180	0.0167	15	c.216 others(32): Show c.216+5438_216+5439insATATTTTTTTTTTTT	LRBA	ENSG00000198589.15	transcript	ENST00000651943.2	protein_coding	2/56			chr4	TogoVar
LRBA_chr4_150259435_151020284	151008988	A A	AAAAAAAA others(8): Show AAAAAAAAAAATATAT	intron_variant intron_variant	MODIFIER	HG03831.hp2 NA18612.hp2 NA18962.hp1 HG03831.hp2 NA18612.hp2 NA18962.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0002 a0001c0001t0001 a0001c0001t0002	a0001c0001t0001g0024 a0001c0001t0001g0100 a0001c0001t0002g0064 a0001c0001t0001g0024 a0001c0001t0001g0100 a0001c0001t0002g0064	3	180	0.0167	15	c.216 others(32): Show c.216+5438_216+5439insATATATTTTTTTTTT	LRBA	ENSG00000198589.15	transcript	ENST00000651943.2	protein_coding	2/56			chr4	TogoVar
LRBA_chr4_150259435_151020284	151008988	A A	AAAAAAAA others(8): Show AAAAAAAAATATATAT	intron_variant intron_variant	MODIFIER	NA19091.hp2 NA19091.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0002 a0001c0001t0002	a0001c0001t0002g0099 a0001c0001t0002g0099	1	180	0.0056	15	c.216 others(32): Show c.216+5438_216+5439insATATATATTTTTTTT	LRBA	ENSG00000198589.15	transcript	ENST00000651943.2	protein_coding	2/56			chr4	TogoVar
LRCH1_chr13_46548170_46749898	46553148	T T	TGCCGCCG others(8): Show TGCCGCCGCCGCCGCC	upstream_gene_variant upstream_gene_variant	MODIFIER	HG03453.hp2 HG03453.hp2	a0001 a0001	a0001c0002 a0001c0002	a0001c0002t0027 a0001c0002t0027	a0001c0002t0027g0108 a0001c0002t0027g0108	1	274	0.0037	15	c.-24 others(24): Show c.-249_-248insGCCGCCGCCGCCGCC	LRCH1	ENSG00000136141.15	transcript	ENST00000389797.8	protein_coding		21		chr13	TogoVar
LRCH1_chr13_46548170_46749898	46558572	C C	CAAAAAAA others(8): Show CAAAAAAAAAAAAAAA	intron_variant intron_variant	MODIFIER	HG01243.hp2 HG02004.hp2 HG02647.hp2 others(2): Show HG01243.hp2 HG02004.hp2 HG02647.hp2 NA18906.hp1 NA19030.hp2	a0001 a0001	a0001c0001 a0001c0002 a0001c0003 others(1): Show a0001c0001 a0001c0002 a0001c0003 a0001c0004	a0001c0001t0006 a0001c0002t0002 a0001c0003t0004 others(2): Show a0001c0001t0006 a0001c0002t0002 a0001c0003t0004 a0001c0004t0009 a0001c0004t0030	a0001c0001t0006g0199 a0001c0002t0002g0149 a0001c0003t0004g0196 others(2): Show a0001c0001t0006g0199 a0001c0002t0002g0149 a0001c0003t0004g0196 a0001c0004t0009g0197 a0001c0004t0030g0198	5	274	0.0183	15	c.307 others(32): Show c.307+4881_307+4895dupAAAAAAAAAAAAAAA	LRCH1	ENSG00000136141.15	transcript	ENST00000389797.8	protein_coding	1/19		INFO_REALIGN_3_PRIME	chr13	TogoVar
LRCH1_chr13_46548170_46749898	46573866	A A	ATATATAT others(8): Show ATATATATATATTTTT	intron_variant intron_variant	MODIFIER	HG01109.hp1 HG01109.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0105 a0001c0001t0001g0105	1	274	0.0037	15	c.307 others(34): Show c.307+20164_307+20165insATATATATATTTTTT	LRCH1	ENSG00000136141.15	transcript	ENST00000389797.8	protein_coding	1/19		INFO_REALIGN_3_PRIME	chr13	TogoVar
LRCH1_chr13_46548170_46749898	46582648	C C	CTTTTTTT others(8): Show CTTTTTTTTTTTTTTT	intron_variant intron_variant	MODIFIER	HG00099.hp1 HG00099.hp2 HG00544.hp1 others(36): Show HG00099.hp1 HG00099.hp2 HG00544.hp1 HG01169.hp2 HG01175.hp1 HG01243.hp1 HG01993.hp2 HG02015.hp1 HG02083.hp1 HG02129.hp2 HG02132.hp1 HG02280.hp2 HG02523.hp2 HG03098.hp2 HG03540.hp2 HG03834.hp1 HG06807.hp2 NA18945.hp2 NA18950.hp1 NA18951.hp2 NA18954.hp2 NA18955.hp2 NA18960.hp1 NA18962.hp2 NA18974.hp1 NA18974.hp2 NA18983.hp1 NA18994.hp1 NA19001.hp1 NA19001.hp2 NA19043.hp1 NA19043.hp2 NA19057.hp1 NA19057.hp2 NA19070.hp1 NA19074.hp1 NA19077.hp2 NA20805.hp1 homoSapiens_chm13v2.hp1	a0001 a0001	a0001c0001 a0001c0002 a0001c0003 others(4): Show a0001c0001 a0001c0002 a0001c0003 a0001c0005 a0001c0007 a0001c0008 a0001c0020	a0001c0001t0001 a0001c0001t0002 a0001c0001t0015 others(13): Show a0001c0001t0001 a0001c0001t0002 a0001c0001t0015 a0001c0001t0017 a0001c0001t0018 a0001c0001t0021 a0001c0002t0001 a0001c0002t0002 a0001c0002t0003 a0001c0002t0022 a0001c0003t0004 a0001c0005t0001 a0001c0005t0005 a0001c0007t0005 a0001c0008t0006 a0001c0020t0003	a0001c0001t0001g0014 a0001c0001t0001g0019 a0001c0001t0001g0036 others(36): Show a0001c0001t0001g0014 a0001c0001t0001g0019 a0001c0001t0001g0036 a0001c0001t0001g0042 a0001c0001t0001g0056 a0001c0001t0001g0062 a0001c0001t0001g0087 a0001c0001t0001g0165 a0001c0001t0001g0207 a0001c0001t0001g0214 a0001c0001t0001g0215 a0001c0001t0001g0216 a0001c0001t0001g0258 a0001c0001t0001g0267 a0001c0001t0002g0268 a0001c0001t0002g0272 a0001c0001t0015g0260 a0001c0001t0015g0261 a0001c0001t0015g0262 a0001c0001t0017g0059 a0001c0001t0018g0026 a0001c0001t0021g0089 a0001c0002t0001g0114 a0001c0002t0002g0179 a0001c0002t0003g0116 a0001c0002t0003g0185 a0001c0002t0022g0106 a0001c0003t0004g0035 a0001c0003t0004g0086 a0001c0003t0004g0228 a0001c0003t0004g0242 a0001c0005t0001g0158 a0001c0005t0005g0156 a0001c0005t0005g0157 a0001c0005t0005g0159 a0001c0005t0005g0160 a0001c0007t0005g0082 a0001c0008t0006g0006 a0001c0020t0003g0115	39	274	0.1423	15	c.307 others(34): Show c.307+28955_307+28969dupTTTTTTTTTTTTTTT	LRCH1	ENSG00000136141.15	transcript	ENST00000389797.8	protein_coding	1/19		INFO_REALIGN_3_PRIME	chr13	TogoVar
LRCH1_chr13_46548170_46749898	46619059	T T	TTTCCTTC others(8): Show TTTCCTTCCTTCCTTC	intron_variant intron_variant	MODIFIER	HG00621.hp2 HG01123.hp1 HG01167.hp1 others(8): Show HG00621.hp2 HG01123.hp1 HG01167.hp1 HG01169.hp1 HG02129.hp1 HG02148.hp2 HG03490.hp1 NA18945.hp2 NA18950.hp2 NA18968.hp1 NA19085.hp1	a0001 a0001	a0001c0001 a0001c0002 a0001c0003 others(1): Show a0001c0001 a0001c0002 a0001c0003 a0001c0005	a0001c0001t0003 a0001c0002t0001 a0001c0002t0002 others(2): Show a0001c0001t0003 a0001c0002t0001 a0001c0002t0002 a0001c0003t0004 a0001c0005t0005	a0001c0001t0003g0053 a0001c0001t0003g0066 a0001c0001t0003g0124 others(8): Show a0001c0001t0003g0053 a0001c0001t0003g0066 a0001c0001t0003g0124 a0001c0001t0003g0141 a0001c0002t0001g0110 a0001c0002t0001g0155 a0001c0002t0002g0144 a0001c0002t0002g0147 a0001c0003t0004g0086 a0001c0003t0004g0213 a0001c0005t0005g0178	11	274	0.0402	15	c.308 others(34): Show c.308-31142_308-31141insTTCCTTCCTTCCTTC	LRCH1	ENSG00000136141.15	transcript	ENST00000389797.8	protein_coding	1/19			chr13	TogoVar
LRCH1_chr13_46548170_46749898	46619113	T T	TTCCTTCC others(8): Show TTCCTTCCTTCCTTCC	intron_variant intron_variant	MODIFIER	HG01099.hp2 HG01106.hp1 HG01175.hp1 others(30): Show HG01099.hp2 HG01106.hp1 HG01175.hp1 HG01175.hp2 HG01243.hp2 HG01884.hp1 HG01884.hp2 HG02004.hp1 HG02015.hp1 HG02055.hp1 HG02451.hp1 HG02451.hp2 HG02486.hp1 HG02559.hp1 HG02572.hp2 HG02647.hp2 HG02683.hp2 HG02717.hp2 HG02922.hp1 HG03239.hp1 HG03516.hp1 HG04228.hp2 NA18942.hp2 NA18951.hp1 NA18954.hp2 NA18955.hp1 NA18968.hp2 NA18974.hp1 NA19003.hp2 NA19007.hp2 NA19074.hp1 NA19077.hp2 NA19240.hp2	a0001 a0002 a0005 a0001 a0002 a0005	a0001c0001 a0001c0002 a0001c0004 others(4): Show a0001c0001 a0001c0002 a0001c0004 a0001c0010 a0001c0012 a0002c0006 a0005c0014	a0001c0001t0001 a0001c0001t0002 a0001c0001t0003 others(12): Show a0001c0001t0001 a0001c0001t0002 a0001c0001t0003 a0001c0001t0006 a0001c0001t0010 a0001c0001t0016 a0001c0001t0018 a0001c0002t0011 a0001c0004t0008 a0001c0004t0030 a0001c0010t0004 a0001c0012t0031 a0002c0006t0007 a0002c0006t0016 a0005c0014t0001	a0001c0001t0001g0008 a0001c0001t0001g0011 a0001c0001t0001g0033 others(30): Show a0001c0001t0001g0008 a0001c0001t0001g0011 a0001c0001t0001g0033 a0001c0001t0001g0036 a0001c0001t0001g0042 a0001c0001t0001g0047 a0001c0001t0001g0074 a0001c0001t0001g0087 a0001c0001t0001g0209 a0001c0001t0001g0210 a0001c0001t0001g0212 a0001c0001t0001g0214 a0001c0001t0001g0215 a0001c0001t0001g0254 a0001c0001t0002g0020 a0001c0001t0002g0025 a0001c0001t0002g0027 a0001c0001t0003g0176 a0001c0001t0006g0199 a0001c0001t0010g0248 a0001c0001t0016g0098 a0001c0001t0018g0026 a0001c0002t0011g0117 a0001c0004t0008g0101 a0001c0004t0008g0195 a0001c0004t0008g0200 a0001c0004t0030g0198 a0001c0010t0004g0203 a0001c0010t0004g0232 a0001c0012t0031g0161 a0002c0006t0007g0192 a0002c0006t0016g0206 a0005c0014t0001g0070	33	274	0.1204	15	c.308 others(34): Show c.308-31087_308-31086insCCTTCCTTCCTTCCT	LRCH1	ENSG00000136141.15	transcript	ENST00000389797.8	protein_coding	1/19		INFO_REALIGN_3_PRIME	chr13	TogoVar
LRCH1_chr13_46548170_46749898	46657500	C C	CTTTTTTT others(8): Show CTTTTTTTTTTTTTTT	intron_variant intron_variant	MODIFIER	NA18522.hp2 NA18522.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0003 a0001c0001t0003	a0001c0001t0003g0090 a0001c0001t0003g0090	1	274	0.0037	15	c.452 others(32): Show c.452+7183_452+7197dupTTTTTTTTTTTTTTT	LRCH1	ENSG00000136141.15	transcript	ENST00000389797.8	protein_coding	2/19		INFO_REALIGN_3_PRIME	chr13	TogoVar
LRCH1_chr13_46548170_46749898	46657692	A A	ATTTTTTT others(8): Show ATTTTTTTTTTTTTTT	intron_variant intron_variant	MODIFIER	HG00423.hp2 HG01257.hp2 HG01891.hp2 others(5): Show HG00423.hp2 HG01257.hp2 HG01891.hp2 HG03471.hp2 HG04184.hp1 NA18955.hp2 NA19010.hp2 NA19064.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0002 a0001c0001t0007 a0001c0001t0001 a0001c0001t0002 a0001c0001t0007	a0001c0001t0001g0169 a0001c0001t0002g0055 a0001c0001t0002g0259 others(5): Show a0001c0001t0001g0169 a0001c0001t0002g0055 a0001c0001t0002g0259 a0001c0001t0002g0268 a0001c0001t0002g0269 a0001c0001t0002g0271 a0001c0001t0007g0201 a0001c0001t0007g0202	8	274	0.0292	15	c.452 others(32): Show c.452+7349_452+7363dupTTTTTTTTTTTTTTT	LRCH1	ENSG00000136141.15	transcript	ENST00000389797.8	protein_coding	2/19		INFO_REALIGN_3_PRIME	chr13	TogoVar
LRCH1_chr13_46548170_46749898	46681936	T T	TGTGTGTG others(8): Show TGTGTGTGTGTGTGTG	intron_variant intron_variant	MODIFIER	HG02818.hp2 HG02818.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0006 a0001c0001t0006	a0001c0001t0006g0171 a0001c0001t0006g0171	1	274	0.0037	15	c.685 others(28): Show c.685+90_685+91insGTGTGTGTGTGTGTG	LRCH1	ENSG00000136141.15	transcript	ENST00000389797.8	protein_coding	4/19			chr13	TogoVar
LRCH1_chr13_46548170_46749898	46746855	C C	CCAAGTAG others(8): Show CCAAGTAGATTGGTCA	downstream_gene_variant downstream_gene_variant	MODIFIER	NA19003.hp2 NA19003.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0002 a0001c0001t0002	a0001c0001t0002g0027 a0001c0001t0002g0027	1	274	0.0037	15	c.50 others(26): Show c.5007_*5008insCAAGTAGATTGGTCA	LRCH1	ENSG00000136141.15	transcript	ENST00000389797.8	protein_coding		1958		chr13	TogoVar
LRCH3_chr3_197786254_197893436	197812504	G G	GTTTTTTT others(8): Show GTTTTTTTTTTTTTTT	intron_variant intron_variant	MODIFIER	HG00408.hp2 HG00438.hp2 HG01167.hp1 others(14): Show HG00408.hp2 HG00438.hp2 HG01167.hp1 HG01167.hp2 HG01358.hp2 HG01934.hp2 HG01981.hp1 HG01981.hp2 HG02148.hp1 HG02148.hp2 HG02273.hp2 HG02293.hp1 HG02300.hp1 HG02300.hp2 HG02523.hp2 HG03490.hp2 NA19043.hp2	a0001 a0001	a0001c0001 a0001c0002 a0001c0001 a0001c0002	a0001c0001t0001 a0001c0001t0002 a0001c0001t0005 others(5): Show a0001c0001t0001 a0001c0001t0002 a0001c0001t0005 a0001c0001t0032 a0001c0001t0062 a0001c0002t0001 a0001c0002t0004 a0001c0002t0005	a0001c0001t0001g0245 a0001c0001t0002g0132 a0001c0001t0002g0232 others(14): Show a0001c0001t0001g0245 a0001c0001t0002g0132 a0001c0001t0002g0232 a0001c0001t0005g0261 a0001c0001t0032g0204 a0001c0001t0062g0085 a0001c0002t0001g0117 a0001c0002t0001g0119 a0001c0002t0001g0126 a0001c0002t0001g0140 a0001c0002t0001g0141 a0001c0002t0001g0170 a0001c0002t0001g0174 a0001c0002t0001g0187 a0001c0002t0001g0254 a0001c0002t0004g0194 a0001c0002t0005g0186	17	292	0.0582	15	c.263 others(32): Show c.263-2392_263-2378dupTTTTTTTTTTTTTTT	LRCH3	ENSG00000186001.14	transcript	ENST00000425562.7	protein_coding	1/20		INFO_REALIGN_3_PRIME	chr3	TogoVar
LRCH3_chr3_197786254_197893436	197841809	A A	ATGTTTTG others(8): Show ATGTTTTGTTTTGTTT	intron_variant intron_variant	MODIFIER	HG00280.hp1 HG02293.hp1 HG02622.hp1 others(4): Show HG00280.hp1 HG02293.hp1 HG02622.hp1 HG02717.hp1 HG03225.hp1 NA19002.hp2 NA19043.hp1	a0001 a0001	a0001c0001 a0001c0002 a0001c0005 a0001c0001 a0001c0002 a0001c0005	a0001c0001t0022 a0001c0001t0064 a0001c0001t0065 others(3): Show a0001c0001t0022 a0001c0001t0064 a0001c0001t0065 a0001c0002t0001 a0001c0002t0004 a0001c0005t0049	a0001c0001t0022g0071 a0001c0001t0064g0165 a0001c0001t0065g0128 others(4): Show a0001c0001t0022g0071 a0001c0001t0064g0165 a0001c0001t0065g0128 a0001c0002t0001g0153 a0001c0002t0001g0187 a0001c0002t0004g0134 a0001c0005t0049g0087	7	292	0.0240	15	c.132 others(34): Show c.1328+2441_1328+2455dupTTTGTTTTGTTTTGT	LRCH3	ENSG00000186001.14	transcript	ENST00000425562.7	protein_coding	10/20		INFO_REALIGN_3_PRIME	chr3	TogoVar
LRCH3_chr3_197786254_197893436	197841846	G G	GTTTTGTT others(8): Show GTTTTGTTTTGTTTTC	intron_variant intron_variant	MODIFIER	HG01884.hp2 HG01934.hp1 NA19240.hp1 HG01884.hp2 HG01934.hp1 NA19240.hp1	a0002 a0010 a0002 a0010	a0002c0006 a0010c0013 a0002c0006 a0010c0013	a0002c0006t0018 a0002c0006t0047 a0010c0013t0018 a0002c0006t0018 a0002c0006t0047 a0010c0013t0018	a0002c0006t0018g0149 a0002c0006t0047g0059 a0010c0013t0018g0168 a0002c0006t0018g0149 a0002c0006t0047g0059 a0010c0013t0018g0168	3	292	0.0103	15	c.132 others(34): Show c.1328+2455_1328+2456insTTTGTTTTCTTTTGT	LRCH3	ENSG00000186001.14	transcript	ENST00000425562.7	protein_coding	10/20		INFO_REALIGN_3_PRIME	chr3	TogoVar
LRCH4_chr7_100569011_100591129	100588920	T T	TCAAGCAA others(8): Show TCAAGCAATCCTCCTG	upstream_gene_variant upstream_gene_variant	MODIFIER	NA19043.hp2 NA19043.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0005 a0001c0001t0001g0005	1	370	0.0027	15	c.-28 others(26): Show c.-2835_-2821dupCAGGAGGATTGCTTG	LRCH4	ENSG00000077454.17	transcript	ENST00000310300.11	protein_coding		2792		chr7	TogoVar
LRFN5_chr14_41601876_41909549	41610661	T T	TAAAAAAA others(8): Show TAAAAAAAAAAAAAAA	intron_variant intron_variant	MODIFIER	HG00544.hp2 HG01952.hp2 HG02451.hp2 others(3): Show HG00544.hp2 HG01952.hp2 HG02451.hp2 HG03710.hp1 HG04199.hp1 NA18906.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0007 a0001c0001t0022 a0001c0001t0001 a0001c0001t0007 a0001c0001t0022	a0001c0001t0001g0005 a0001c0001t0001g0094 a0001c0001t0001g0095 others(3): Show a0001c0001t0001g0005 a0001c0001t0001g0094 a0001c0001t0001g0095 a0001c0001t0007g0093 a0001c0001t0007g0096 a0001c0001t0022g0003	6	280	0.0214	15	c.-19 others(34): Show c.-197+2107_-197+2121dupAAAAAAAAAAAAAAA	LRFN5	ENSG00000165379.14	transcript	ENST00000298119.9	protein_coding	1/5		INFO_REALIGN_3_PRIME	chr14	TogoVar
LRFN5_chr14_41601876_41909549	41710981	G G	GTGCCATA others(8): Show GTGCCATATTTTTAAA	intron_variant intron_variant	MODIFIER	HG00140.hp2 HG00544.hp2 HG00621.hp1 others(39): Show HG00140.hp2 HG00544.hp2 HG00621.hp1 HG00639.hp2 HG00738.hp1 HG00741.hp1 HG01070.hp2 HG01071.hp2 HG01106.hp2 HG01192.hp2 HG01261.hp1 HG01346.hp2 HG01361.hp2 HG01891.hp2 HG01928.hp2 HG01943.hp1 HG02004.hp1 HG02109.hp1 HG02257.hp1 HG02258.hp1 HG02300.hp1 HG02523.hp2 HG02602.hp2 HG02809.hp2 HG02895.hp1 HG03139.hp1 HG03195.hp2 HG03225.hp2 HG03471.hp1 HG03486.hp2 HG03491.hp1 HG03579.hp2 HG03688.hp2 HG03831.hp1 HG03942.hp2 HG04115.hp2 HG04199.hp2 NA18906.hp2 NA18940.hp2 NA18971.hp1 NA18980.hp2 homoSapiens_chm13v2.hp1	a0001 a0001	a0001c0001 a0001c0002 a0001c0005 a0001c0001 a0001c0002 a0001c0005	a0001c0001t0001 a0001c0001t0002 a0001c0001t0004 others(8): Show a0001c0001t0001 a0001c0001t0002 a0001c0001t0004 a0001c0001t0005 a0001c0001t0007 a0001c0001t0010 a0001c0001t0022 a0001c0002t0001 a0001c0002t0002 a0001c0002t0004 a0001c0005t0023	a0001c0001t0001g0053 a0001c0001t0001g0056 a0001c0001t0001g0201 others(39): Show a0001c0001t0001g0053 a0001c0001t0001g0056 a0001c0001t0001g0201 a0001c0001t0002g0008 a0001c0001t0002g0012 a0001c0001t0002g0018 a0001c0001t0002g0027 a0001c0001t0002g0028 a0001c0001t0002g0031 a0001c0001t0002g0225 a0001c0001t0004g0033 a0001c0001t0004g0034 a0001c0001t0004g0035 a0001c0001t0004g0036 a0001c0001t0004g0223 a0001c0001t0005g0001 a0001c0001t0005g0002 a0001c0001t0007g0093 a0001c0001t0010g0269 a0001c0001t0010g0270 a0001c0001t0022g0003 a0001c0002t0001g0067 a0001c0002t0001g0182 a0001c0002t0002g0006 a0001c0002t0002g0009 a0001c0002t0002g0010 a0001c0002t0002g0011 a0001c0002t0002g0015 a0001c0002t0002g0016 a0001c0002t0002g0017 a0001c0002t0002g0019 a0001c0002t0002g0020 a0001c0002t0002g0021 a0001c0002t0002g0022 a0001c0002t0002g0023 a0001c0002t0002g0024 a0001c0002t0002g0026 a0001c0002t0002g0029 a0001c0002t0002g0030 a0001c0002t0002g0032 a0001c0002t0004g0224 a0001c0005t0023g0126	42	280	0.1500	15	c.-19 others(36): Show c.-196-55870_-196-55869insCATATTTTTAAATGC	LRFN5	ENSG00000165379.14	transcript	ENST00000298119.9	protein_coding	1/5		INFO_REALIGN_3_PRIME	chr14	TogoVar
LRFN5_chr14_41601876_41909549	41856672	A A	ATTTTTTT others(8): Show ATTTTTTTTTTTTTTT	intron_variant intron_variant	MODIFIER	HG02074.hp1 HG02074.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0179 a0001c0001t0001g0179	1	280	0.0036	15	c.-20 others(34): Show c.-20-29932_-20-29931insTTTTTTTTTTTTTTT	LRFN5	ENSG00000165379.14	transcript	ENST00000298119.9	protein_coding	2/5		INFO_REALIGN_3_PRIME	chr14	TogoVar
LRFN5_chr14_41601876_41909549	41856675	A A	ATTATTAT others(8): Show ATTATTATTTTTTTTT	intron_variant intron_variant	MODIFIER	HG00558.hp1 HG02486.hp1 HG03491.hp2 others(1): Show HG00558.hp1 HG02486.hp1 HG03491.hp2 NA19072.hp2	a0001 a0001	a0001c0001 a0001c0002 a0001c0001 a0001c0002	a0001c0001t0001 a0001c0002t0006 a0001c0001t0001 a0001c0002t0006	a0001c0001t0001g0047 a0001c0001t0001g0049 a0001c0001t0001g0147 others(1): Show a0001c0001t0001g0047 a0001c0001t0001g0049 a0001c0001t0001g0147 a0001c0002t0006g0275	4	280	0.0143	15	c.-20 others(34): Show c.-20-29929_-20-29928insATTATTTTTTTTTTT	LRFN5	ENSG00000165379.14	transcript	ENST00000298119.9	protein_coding	2/5		INFO_REALIGN_3_PRIME	chr14	TogoVar
LRFN5_chr14_41601876_41909549	41856675	A A	ATTATTTT others(8): Show ATTATTTTTTTTTTTT	intron_variant intron_variant	MODIFIER	HG01070.hp2 HG02451.hp1 HG03927.hp1 others(1): Show HG01070.hp2 HG02451.hp1 HG03927.hp1 NA19240.hp2	a0001 a0001	a0001c0001 a0001c0002 a0001c0001 a0001c0002	a0001c0001t0001 a0001c0001t0002 a0001c0001t0026 others(1): Show a0001c0001t0001 a0001c0001t0002 a0001c0001t0026 a0001c0002t0002	a0001c0001t0001g0172 a0001c0001t0002g0081 a0001c0001t0026g0100 others(1): Show a0001c0001t0001g0172 a0001c0001t0002g0081 a0001c0001t0026g0100 a0001c0002t0002g0023	4	280	0.0143	15	c.-20 others(34): Show c.-20-29929_-20-29928insATTTTTTTTTTTTTT	LRFN5	ENSG00000165379.14	transcript	ENST00000298119.9	protein_coding	2/5		INFO_REALIGN_3_PRIME	chr14	TogoVar
LRFN5_chr14_41601876_41909549	41856675	A A	ATTTTTTT others(8): Show ATTTTTTTTTTTTTTT	intron_variant intron_variant	MODIFIER	HG00544.hp1 HG00735.hp1 HG01258.hp1 others(9): Show HG00544.hp1 HG00735.hp1 HG01258.hp1 HG01358.hp1 HG02080.hp1 HG02109.hp2 HG02970.hp2 HG03139.hp1 HG03688.hp1 NA18940.hp1 NA18971.hp2 NA19009.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0002 a0001c0001t0006 others(1): Show a0001c0001t0001 a0001c0001t0002 a0001c0001t0006 a0001c0001t0019	a0001c0001t0001g0106 a0001c0001t0001g0173 a0001c0001t0001g0183 others(9): Show a0001c0001t0001g0106 a0001c0001t0001g0173 a0001c0001t0001g0183 a0001c0001t0001g0188 a0001c0001t0001g0190 a0001c0001t0001g0197 a0001c0001t0001g0201 a0001c0001t0001g0212 a0001c0001t0001g0218 a0001c0001t0002g0118 a0001c0001t0006g0277 a0001c0001t0019g0199	12	280	0.0429	15	c.-20 others(34): Show c.-20-29926_-20-29912dupTTTTTTTTTTTTTTT	LRFN5	ENSG00000165379.14	transcript	ENST00000298119.9	protein_coding	2/5		INFO_REALIGN_3_PRIME	chr14	TogoVar
LRGUK_chr7_134122340_134269595	134178934	A A	AAAAAAAA others(8): Show AAAAAAAAAAAAAACC	intron_variant intron_variant	MODIFIER	HG03834.hp1 HG03834.hp2 HG03834.hp1 HG03834.hp2	a0001 a0001	a0001c0001 a0001c0003 a0001c0001 a0001c0003	a0001c0001t0002 a0001c0003t0004 a0001c0001t0002 a0001c0003t0004	a0001c0001t0002g0160 a0001c0003t0004g0112 a0001c0001t0002g0160 a0001c0003t0004g0112	2	220	0.0091	15	c.121 others(32): Show c.1214+338_1214+339insCCAAAAAAAAAAAAA	LRGUK	ENSG00000155530.4	transcript	ENST00000285928.3	protein_coding	10/19		INFO_REALIGN_3_PRIME	chr7	TogoVar
LRGUK_chr7_134122340_134269595	134219334	T T	TTGTTCCC others(8): Show TTGTTCCCAAGAAATC	intron_variant intron_variant	MODIFIER	NA19075.hp1 NA19075.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0002 a0001c0001t0002	a0001c0001t0002g0186 a0001c0001t0002g0186	1	220	0.0046	15	c.184 others(34): Show c.1844-2444_1844-2430dupTGTTCCCAAGAAATC	LRGUK	ENSG00000155530.4	transcript	ENST00000285928.3	protein_coding	15/19		INFO_REALIGN_3_PRIME	chr7	TogoVar
LRIF1_chr1_110942190_110968922	110957470	C C	CAAAAAAA others(8): Show CAAAAAAAAAAAAAAA	intron_variant intron_variant	MODIFIER	NA19055.hp2 NA19055.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0004 a0001c0001t0004	a0001c0001t0004g0185 a0001c0001t0004g0185	1	446	0.0022	15	c.69- others(30): Show c.69-4670_69-4656dupTTTTTTTTTTTTTTT	LRIF1	ENSG00000121931.16	transcript	ENST00000369763.5	protein_coding	1/3			chr1	TogoVar
LRIF1_chr1_110942190_110968922	110963295	A A	ATCTTCCA others(8): Show ATCTTCCAGAAGGTTT	intron_variant intron_variant	MODIFIER	HG03704.hp2 HG03704.hp2	a0002 a0002	a0002c0002 a0002c0002	a0002c0002t0001 a0002c0002t0001	a0002c0002t0001g0056 a0002c0002t0001g0056	1	446	0.0022	15	c.68+ others(28): Show c.68+311_68+325dupAAACCTTCTGGAAGA	LRIF1	ENSG00000121931.16	transcript	ENST00000369763.5	protein_coding	1/3			chr1	TogoVar
LRIT3_chr4_109843107_109877315	109850418	C C	CTTTCTTT others(8): Show CTTTCTTTCTTTCTTT	intron_variant intron_variant	MODIFIER	HG01496.hp1 HG01884.hp2 HG02155.hp2 others(3): Show HG01496.hp1 HG01884.hp2 HG02155.hp2 HG02602.hp2 HG03486.hp1 homoSapiens_chm13v2.hp1	a0001 a0002 a0003 a0001 a0002 a0003	a0001c0002 a0001c0004 a0002c0001 others(1): Show a0001c0002 a0001c0004 a0002c0001 a0003c0003	a0001c0002t0001 a0001c0004t0005 a0002c0001t0005 others(1): Show a0001c0002t0001 a0001c0004t0005 a0002c0001t0005 a0003c0003t0002	a0001c0002t0001g0078 a0001c0004t0005g0104 a0002c0001t0005g0295 others(3): Show a0001c0002t0001g0078 a0001c0004t0005g0104 a0002c0001t0005g0295 a0003c0003t0002g0100 a0003c0003t0002g0148 a0003c0003t0002g0181	6	332	0.0181	15	c.117 others(32): Show c.117-1086_117-1085insTTTCTTTCTTTCTTT	LRIT3	ENSG00000183423.12	transcript	ENST00000594814.6	protein_coding	1/3			chr4	TogoVar
LRIT3_chr4_109843107_109877315	109850422	C C	CCTTCCTT others(8): Show CCTTCCTTCCTTCTTT	intron_variant intron_variant	MODIFIER	HG02040.hp1 HG02717.hp2 HG02040.hp1 HG02717.hp2	a0001 a0006 a0001 a0006	a0001c0011 a0006c0010 a0001c0011 a0006c0010	a0001c0011t0001 a0006c0010t0005 a0001c0011t0001 a0006c0010t0005	a0001c0011t0001g0033 a0006c0010t0005g0226 a0001c0011t0001g0033 a0006c0010t0005g0226	2	332	0.0060	15	c.117 others(32): Show c.117-1079_117-1078insCCTTCCTTCTTTCTT	LRIT3	ENSG00000183423.12	transcript	ENST00000594814.6	protein_coding	1/3		INFO_REALIGN_3_PRIME	chr4	TogoVar
LRIT3_chr4_109843107_109877315	109850422	C C	CCTTCCTT others(8): Show CCTTCCTTCTTTCTTT	intron_variant intron_variant	MODIFIER	HG02258.hp1 NA18941.hp2 NA18954.hp2 others(1): Show HG02258.hp1 NA18941.hp2 NA18954.hp2 NA20905.hp2	a0003 a0004 a0007 a0003 a0004 a0007	a0003c0007 a0003c0008 a0004c0005 others(1): Show a0003c0007 a0003c0008 a0004c0005 a0007c0012	a0003c0007t0002 a0003c0008t0012 a0004c0005t0006 others(1): Show a0003c0007t0002 a0003c0008t0012 a0004c0005t0006 a0007c0012t0002	a0003c0007t0002g0164 a0003c0008t0012g0165 a0004c0005t0006g0122 others(1): Show a0003c0007t0002g0164 a0003c0008t0012g0165 a0004c0005t0006g0122 a0007c0012t0002g0163	4	332	0.0121	15	c.117 others(32): Show c.117-1079_117-1078insCCTTCTTTCTTTCTT	LRIT3	ENSG00000183423.12	transcript	ENST00000594814.6	protein_coding	1/3		INFO_REALIGN_3_PRIME	chr4	TogoVar
LRIT3_chr4_109843107_109877315	109850422	C C	CCTTCTTT others(8): Show CCTTCTTTCTTTCTTT	intron_variant intron_variant	MODIFIER	NA18979.hp1 NA20129.hp1 NA18979.hp1 NA20129.hp1	a0001 a0004 a0001 a0004	a0001c0004 a0004c0005 a0001c0004 a0004c0005	a0001c0004t0005 a0004c0005t0006 a0001c0004t0005 a0004c0005t0006	a0001c0004t0005g0102 a0004c0005t0006g0125 a0001c0004t0005g0102 a0004c0005t0006g0125	2	332	0.0060	15	c.117 others(32): Show c.117-1079_117-1078insCTTTCTTTCTTTCTT	LRIT3	ENSG00000183423.12	transcript	ENST00000594814.6	protein_coding	1/3		INFO_REALIGN_3_PRIME	chr4	TogoVar
LRIT3_chr4_109843107_109877315	109850422	C C	CTTTCTTT others(8): Show CTTTCTTTCTTTCTTT	intron_variant intron_variant	MODIFIER	HG01261.hp2 HG02056.hp2 HG02698.hp1 others(3): Show HG01261.hp2 HG02056.hp2 HG02698.hp1 HG03704.hp1 NA18965.hp2 NA19000.hp1	a0001 a0002 a0003 a0001 a0002 a0003	a0001c0002 a0002c0001 a0003c0003 a0001c0002 a0002c0001 a0003c0003	a0001c0002t0001 a0002c0001t0004 a0002c0001t0005 others(1): Show a0001c0002t0001 a0002c0001t0004 a0002c0001t0005 a0003c0003t0002	a0001c0002t0001g0059 a0001c0002t0001g0060 a0001c0002t0001g0061 others(3): Show a0001c0002t0001g0059 a0001c0002t0001g0060 a0001c0002t0001g0061 a0002c0001t0004g0282 a0002c0001t0005g0281 a0003c0003t0002g0175	6	332	0.0181	15	c.117 others(32): Show c.117-1082_117-1081insTTTCTTTCTTTCTTT	LRIT3	ENSG00000183423.12	transcript	ENST00000594814.6	protein_coding	1/3			chr4	TogoVar
LRMDA_chr10_75426624_76565168	75616249	T T	TAGCAGCA others(8): Show TAGCAGCAGCAGCAGC	intron_variant intron_variant	MODIFIER	HG01081.hp2 HG01081.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0037 a0001c0001t0001g0037	1	46	0.0217	15	c.131 others(36): Show c.131+177776_131+177790dupCAGCAGCAGCAGCAG	LRMDA	ENSG00000148655.16	transcript	ENST00000611255.5	protein_coding	2/6		INFO_REALIGN_3_PRIME	chr10	TogoVar
LRMDA_chr10_75426624_76565168	75672524	T T	TCCTCCCC others(8): Show TCCTCCCCTCCCCTCC	intron_variant intron_variant	MODIFIER	HG03139.hp1 HG03139.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0008 a0001c0001t0008	a0001c0001t0008g0010 a0001c0001t0008g0010	1	46	0.0217	15	c.131 others(36): Show c.131+234059_131+234073dupCCCCTCCCCTCCCCT	LRMDA	ENSG00000148655.16	transcript	ENST00000611255.5	protein_coding	2/6		INFO_REALIGN_3_PRIME	chr10	TogoVar
LRMDA_chr10_75426624_76565168	75672524	T T	TCCTTTCC others(8): Show TCCTTTCCTCCCCTCC	intron_variant intron_variant	MODIFIER	HG01258.hp2 HG01258.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0018 a0001c0001t0018	a0001c0001t0018g0015 a0001c0001t0018g0015	1	46	0.0217	15	c.131 others(36): Show c.131+234033_131+234034insTTCCTCCCCTCCCCT	LRMDA	ENSG00000148655.16	transcript	ENST00000611255.5	protein_coding	2/6		INFO_REALIGN_3_PRIME	chr10	TogoVar
LRMDA_chr10_75426624_76565168	76254281	T T	TTACTATA others(8): Show TTACTATACTATACTA	intron_variant intron_variant	MODIFIER	HG03098.hp2 HG03098.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0010 a0001c0001t0010	a0001c0001t0010g0008 a0001c0001t0010g0008	1	46	0.0217	15	c.517 others(34): Show c.517-70111_517-70097dupTATACTATACTATAC	LRMDA	ENSG00000148655.16	transcript	ENST00000611255.5	protein_coding	5/6		INFO_REALIGN_3_PRIME	chr10	TogoVar
LRMDA_chr10_75426624_76565168	76254300	T T	TATACCAT others(8): Show TATACCATACCATACC	intron_variant intron_variant	MODIFIER	HG02083.hp2 NA20300.hp2 HG02083.hp2 NA20300.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0004 a0001c0001t0006 a0001c0001t0004 a0001c0001t0006	a0001c0001t0004g0014 a0001c0001t0006g0005 a0001c0001t0004g0014 a0001c0001t0006g0005	2	46	0.0435	15	c.517 others(34): Show c.517-70073_517-70059dupACCATACCATACCAT	LRMDA	ENSG00000148655.16	transcript	ENST00000611255.5	protein_coding	5/6		INFO_REALIGN_3_PRIME	chr10	TogoVar
LRMDA_chr10_75426624_76565168	76254300	T T	TATACTAT others(8): Show TATACTATACCATACC	intron_variant intron_variant	MODIFIER	HG00639.hp1 HG00639.hp2 HG01081.hp1 others(8): Show HG00639.hp1 HG00639.hp2 HG01081.hp1 HG01258.hp1 HG03139.hp1 HG03195.hp2 HG03209.hp2 HG03471.hp1 NA18522.hp1 NA19030.hp2 NA21309.hp1	a0001 a0001	a0001c0001 a0001c0002 a0001c0001 a0001c0002	a0001c0001t0001 a0001c0001t0002 a0001c0001t0003 others(7): Show a0001c0001t0001 a0001c0001t0002 a0001c0001t0003 a0001c0001t0004 a0001c0001t0008 a0001c0001t0012 a0001c0001t0013 a0001c0002t0007 a0001c0002t0014 a0001c0002t0019	a0001c0001t0001g0016 a0001c0001t0001g0031 a0001c0001t0002g0002 others(8): Show a0001c0001t0001g0016 a0001c0001t0001g0031 a0001c0001t0002g0002 a0001c0001t0003g0018 a0001c0001t0004g0011 a0001c0001t0008g0010 a0001c0001t0012g0021 a0001c0001t0013g0022 a0001c0002t0007g0007 a0001c0002t0014g0041 a0001c0002t0019g0045	11	46	0.2391	15	c.517 others(34): Show c.517-70097_517-70096insTATACCATACCATAC	LRMDA	ENSG00000148655.16	transcript	ENST00000611255.5	protein_coding	5/6		INFO_REALIGN_3_PRIME	chr10	TogoVar
LRMDA_chr10_75426624_76565168	76254300	T T	TATACTAT others(8): Show TATACTATACTATACC	intron_variant intron_variant	MODIFIER	HG00642.hp2 HG00642.hp2	a0001 a0001	a0001c0002 a0001c0002	a0001c0002t0008 a0001c0002t0008	a0001c0002t0008g0025 a0001c0002t0008g0025	1	46	0.0217	15	c.517 others(34): Show c.517-70097_517-70096insTATACTATACCATAC	LRMDA	ENSG00000148655.16	transcript	ENST00000611255.5	protein_coding	5/6		INFO_REALIGN_3_PRIME	chr10	TogoVar
LRMDA_chr10_75426624_76565168	76254340	C C	CATACCAT others(8): Show CATACCATACTATCCT	intron_variant intron_variant	MODIFIER	NA19240.hp1 NA19240.hp1	a0001 a0001	a0001c0002 a0001c0002	a0001c0002t0002 a0001c0002t0002	a0001c0002t0002g0019 a0001c0002t0002g0019	1	46	0.0217	15	c.517 others(34): Show c.517-70059_517-70058insACCATACTATCCTAT	LRMDA	ENSG00000148655.16	transcript	ENST00000611255.5	protein_coding	5/6		INFO_REALIGN_3_PRIME	chr10	TogoVar
LRMDA_chr10_75426624_76565168	76254358	C C	CCTATGCT others(8): Show CCTATGCTATGCTATG	intron_variant intron_variant	MODIFIER	HG01258.hp1 HG02818.hp1 HG03139.hp1 others(2): Show HG01258.hp1 HG02818.hp1 HG03139.hp1 HG03471.hp1 NA21309.hp1	a0001 a0001	a0001c0001 a0001c0002 a0001c0001 a0001c0002	a0001c0001t0001 a0001c0001t0007 a0001c0001t0008 others(2): Show a0001c0001t0001 a0001c0001t0007 a0001c0001t0008 a0001c0001t0012 a0001c0002t0019	a0001c0001t0001g0016 a0001c0001t0007g0046 a0001c0001t0008g0010 others(2): Show a0001c0001t0001g0016 a0001c0001t0007g0046 a0001c0001t0008g0010 a0001c0001t0012g0021 a0001c0002t0019g0045	5	46	0.1087	15	c.517 others(34): Show c.517-69998_517-69984dupGCTATGCTATGCTAT	LRMDA	ENSG00000148655.16	transcript	ENST00000611255.5	protein_coding	5/6		INFO_REALIGN_3_PRIME	chr10	TogoVar
LRP11_chr6_149813757_149869359	149816634	C C	CTTTTTTT others(8): Show CTTTTTTTTTTTTTTT	downstream_gene_variant downstream_gene_variant	MODIFIER	NA21309.hp1 NA21309.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0005 a0001c0001t0005	a0001c0001t0005g0234 a0001c0001t0005g0234	1	334	0.0030	15	c.39 others(26): Show c.3914_*3915insAAAAAAAAAAAAAAA	LRP11	ENSG00000120256.11	transcript	ENST00000239367.7	protein_coding		2122		chr6	TogoVar
LRP11_chr6_149813757_149869359	149846953	T T	TAATAGAA others(8): Show TAATAGAATAGAATAG	intron_variant intron_variant	MODIFIER	HG00140.hp1 HG01069.hp2 HG01071.hp1 others(12): Show HG00140.hp1 HG01069.hp2 HG01071.hp1 HG01516.hp2 HG02040.hp1 HG02273.hp1 HG02280.hp1 HG06807.hp1 NA18942.hp2 NA18951.hp1 NA18967.hp1 NA18975.hp1 NA19003.hp1 NA19077.hp1 NA19088.hp1	a0001 a0002 a0009 a0001 a0002 a0009	a0001c0001 a0002c0002 a0009c0015 a0001c0001 a0002c0002 a0009c0015	a0001c0001t0001 a0001c0001t0002 a0002c0002t0001 others(3): Show a0001c0001t0001 a0001c0001t0002 a0002c0002t0001 a0002c0002t0002 a0002c0002t0003 a0009c0015t0023	a0001c0001t0001g0156 a0001c0001t0001g0160 a0001c0001t0002g0294 others(11): Show a0001c0001t0001g0156 a0001c0001t0001g0160 a0001c0001t0002g0294 a0001c0001t0002g0300 a0001c0001t0002g0304 a0002c0002t0001g0064 a0002c0002t0001g0088 a0002c0002t0002g0007 a0002c0002t0002g0101 a0002c0002t0002g0111 a0002c0002t0002g0116 a0002c0002t0002g0120 a0002c0002t0003g0078 a0009c0015t0023g0034	15	334	0.0449	15	c.772 others(32): Show c.772-3844_772-3830dupCTATTCTATTCTATT	LRP11	ENSG00000120256.11	transcript	ENST00000239367.7	protein_coding	2/6			chr6	TogoVar

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