Joint Open Genome and Omics Platform (JoGo)

Search by Variant

Regionname

Chr

Snpeff genename

Sampleids

Snpeff haplotype class

Snpeff annotation impact

Snpeff annotation impact detail

Hapid

Samplehapid

No_hapid

No_samplehapid

Start

End

Minac

Maxac

Minlen

Maxlen

Sort By

Order by

regionname	pos	ref	alt	annotation	impact	samples	ahapids	chapids	thapids	thapids	ac	an	af	len	hgvs_c	genename	geneid	featuretype	featureid	transcript_biotype	rank	distance	status	chr	external
LRP11_chr6_149813757_149869359	149859397	T T	TATATATA others(8): Show TATATATATATATATA	intron_variant intron_variant	MODIFIER	HG02074.hp2 HG02074.hp2	a0001 a0001	a0001c0006 a0001c0006	a0001c0006t0001 a0001c0006t0001	a0001c0006t0001g0224 a0001c0006t0001g0224	1	334	0.0030	15	c.613 others(32): Show c.613+4010_613+4011insTATATATATATATAT	LRP11	ENSG00000120256.11	transcript	ENST00000239367.7	protein_coding	1/6			chr6	TogoVar
LRP11_chr6_149813757_149869359	149862577	C C	CTTTTTTT others(8): Show CTTTTTTTTTTTTTTT	intron_variant intron_variant	MODIFIER	HG01884.hp1 HG01884.hp1	a0004 a0004	a0004c0011 a0004c0011	a0004c0011t0025 a0004c0011t0025	a0004c0011t0025g0317 a0004c0011t0025g0317	1	334	0.0030	15	c.613 others(30): Show c.613+816_613+830dupAAAAAAAAAAAAAAA	LRP11	ENSG00000120256.11	transcript	ENST00000239367.7	protein_coding	1/6			chr6	TogoVar
LRP12_chr8_104484236_104594258	104588964	A A	ACGCCGCC others(8): Show ACGCCGCCGCCGCCGC	5_prime_UTR_variant 5_prime_UTR_variant	MODIFIER	HG00280.hp2 HG00423.hp1 HG00280.hp2 HG00423.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0032 a0001c0001t0040 a0001c0001t0032 a0001c0001t0040	a0001c0001t0032g0028 a0001c0001t0040g0046 a0001c0001t0032g0028 a0001c0001t0040g0046	2	318	0.0063	15	c.-68 others(22): Show c.-68_-67insGCGGCGGCGGCGGCG	LRP12	ENSG00000147650.12	transcript	ENST00000276654.10	protein_coding	1/7	68		chr8	TogoVar
LRP12_chr8_104484236_104594258	104588970	A A	ACGACGCC others(8): Show ACGACGCCGCCGCCGC	5_prime_UTR_variant 5_prime_UTR_variant	MODIFIER	HG03704.hp2 HG03704.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0045 a0001c0001t0045	a0001c0001t0045g0089 a0001c0001t0045g0089	1	318	0.0031	15	c.-74 others(22): Show c.-74_-73insGCGGCGGCGGCGTCG	LRP12	ENSG00000147650.12	transcript	ENST00000276654.10	protein_coding	1/7	74		chr8	TogoVar
LRP12_chr8_104484236_104594258	104588970	A A	ACGCCGCC others(8): Show ACGCCGCCGCCGCCGC	5_prime_UTR_variant 5_prime_UTR_variant	MODIFIER	HG00544.hp1 HG00642.hp1 HG01081.hp1 others(26): Show HG00544.hp1 HG00642.hp1 HG01081.hp1 HG01099.hp1 HG01109.hp2 HG01192.hp1 HG01361.hp2 HG01433.hp1 HG01516.hp1 HG01943.hp1 HG01981.hp1 HG02004.hp2 HG02027.hp2 HG02056.hp2 HG02132.hp1 HG02148.hp1 HG02293.hp2 HG02451.hp2 HG03130.hp2 HG03654.hp2 NA18971.hp1 NA18986.hp2 NA18987.hp2 NA19001.hp2 NA19057.hp1 NA19060.hp1 NA19072.hp1 NA19080.hp1 NA19084.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0003 a0001c0001t0035 a0001c0001t0003 a0001c0001t0035	a0001c0001t0003g0002 a0001c0001t0003g0049 a0001c0001t0003g0050 others(25): Show a0001c0001t0003g0002 a0001c0001t0003g0049 a0001c0001t0003g0050 a0001c0001t0003g0051 a0001c0001t0003g0052 a0001c0001t0003g0053 a0001c0001t0003g0054 a0001c0001t0003g0055 a0001c0001t0003g0056 a0001c0001t0003g0057 a0001c0001t0003g0058 a0001c0001t0003g0059 a0001c0001t0003g0060 a0001c0001t0003g0061 a0001c0001t0003g0062 a0001c0001t0003g0063 a0001c0001t0003g0064 a0001c0001t0003g0065 a0001c0001t0003g0066 a0001c0001t0003g0067 a0001c0001t0003g0068 a0001c0001t0003g0069 a0001c0001t0003g0070 a0001c0001t0003g0071 a0001c0001t0003g0072 a0001c0001t0003g0073 a0001c0001t0003g0074 a0001c0001t0035g0035	29	318	0.0912	15	c.-88 others(22): Show c.-88_-74dupGCGGCGGCGGCGGCG	LRP12	ENSG00000147650.12	transcript	ENST00000276654.10	protein_coding	1/7	74		chr8	TogoVar
LRP1B_chr2_140226423_142136016	140228247	T T	TATTCCAT others(8): Show TATTCCATATATATAA	downstream_gene_variant downstream_gene_variant	MODIFIER	HG03225.hp2 NA19240.hp2 HG03225.hp2 NA19240.hp2	a0001 a0001	a0001c0013 a0001c0018 a0001c0013 a0001c0018	a0001c0013t0002 a0001c0018t0002 a0001c0013t0002 a0001c0018t0002	a0001c0013t0002g0012 a0001c0018t0002g0013 a0001c0013t0002g0012 a0001c0018t0002g0013	2	28	0.0714	15	c.49 others(26): Show c.4938_*4939insTTATATATATGGAAT	LRP1B	ENSG00000168702.18	transcript	ENST00000389484.8	protein_coding		3175		chr2	TogoVar
LRP1B_chr2_140226423_142136016	140252062	C C	CAAAAAAA others(8): Show CAAAAAAAAAAAAAAA	intron_variant intron_variant	MODIFIER	HG03516.hp2 NA18522.hp2 HG03516.hp2 NA18522.hp2	a0001 a0005 a0001 a0005	a0001c0002 a0005c0009 a0001c0002 a0005c0009	a0001c0002t0010 a0005c0009t0001 a0001c0002t0010 a0005c0009t0001	a0001c0002t0010g0022 a0005c0009t0001g0007 a0001c0002t0010g0022 a0005c0009t0001g0007	2	28	0.0714	15	c.132 others(36): Show c.13248-4915_13248-4901dupTTTTTTTTTTTTTTT	LRP1B	ENSG00000168702.18	transcript	ENST00000389484.8	protein_coding	86/90			chr2	TogoVar
LRP1B_chr2_140226423_142136016	140398519	T T	TTTGTTGT others(8): Show TTTGTTGTTGTTGTCG	intron_variant intron_variant	MODIFIER	HG01261.hp2 HG01884.hp2 HG02145.hp2 others(5): Show HG01261.hp2 HG01884.hp2 HG02145.hp2 HG02486.hp2 HG02630.hp2 HG02922.hp2 HG02965.hp1 HG03516.hp1	a0001 a0001	a0001c0001 a0001c0008 a0001c0016 others(5): Show a0001c0001 a0001c0008 a0001c0016 a0001c0017 a0001c0019 a0001c0024 a0001c0026 a0001c0027	a0001c0001t0006 a0001c0008t0001 a0001c0016t0001 others(5): Show a0001c0001t0006 a0001c0008t0001 a0001c0016t0001 a0001c0017t0006 a0001c0019t0001 a0001c0024t0005 a0001c0026t0001 a0001c0027t0001	a0001c0001t0006g0024 a0001c0008t0001g0008 a0001c0016t0001g0011 others(5): Show a0001c0001t0006g0024 a0001c0008t0001g0008 a0001c0016t0001g0011 a0001c0017t0006g0015 a0001c0019t0001g0016 a0001c0024t0005g0009 a0001c0026t0001g0025 a0001c0027t0001g0021	8	28	0.2857	15	c.104 others(38): Show c.10415-12511_10415-12510insCGACAACAACAACAA	LRP1B	ENSG00000168702.18	transcript	ENST00000389484.8	protein_coding	66/90			chr2	TogoVar
LRP1B_chr2_140226423_142136016	140572795	C C	CATAAAAT others(8): Show CATAAAATAAAATAAA	intron_variant intron_variant	MODIFIER	HG01884.hp1 HG02486.hp1 HG02559.hp2 others(5): Show HG01884.hp1 HG02486.hp1 HG02559.hp2 HG02630.hp2 HG02723.hp2 HG03225.hp2 NA18522.hp1 NA18522.hp2	a0001 a0002 a0001 a0002	a0001c0002 a0001c0014 a0001c0015 others(5): Show a0001c0002 a0001c0014 a0001c0015 a0001c0017 a0001c0018 a0001c0020 a0001c0028 a0002c0004	a0001c0002t0010 a0001c0014t0004 a0001c0015t0009 others(5): Show a0001c0002t0010 a0001c0014t0004 a0001c0015t0009 a0001c0017t0006 a0001c0018t0002 a0001c0020t0007 a0001c0028t0002 a0002c0004t0004	a0001c0002t0010g0022 a0001c0014t0004g0002 a0001c0015t0009g0017 others(5): Show a0001c0002t0010g0022 a0001c0014t0004g0002 a0001c0015t0009g0017 a0001c0017t0006g0015 a0001c0018t0002g0013 a0001c0020t0007g0019 a0001c0028t0002g0020 a0002c0004t0004g0006	8	28	0.2857	15	c.719 others(36): Show c.7194+25821_7194+25835dupTTTATTTTATTTTAT	LRP1B	ENSG00000168702.18	transcript	ENST00000389484.8	protein_coding	43/90			chr2	TogoVar
LRP1B_chr2_140226423_142136016	140803290	T T	TTTTTTTT others(8): Show TTTTTTTTTTTTTTTC	intron_variant intron_variant	MODIFIER	HG02486.hp2 HG02486.hp2	a0001 a0001	a0001c0024 a0001c0024	a0001c0024t0005 a0001c0024t0005	a0001c0024t0005g0009 a0001c0024t0005g0009	1	28	0.0357	15	c.535 others(36): Show c.5359+10366_5359+10367insGAAAAAAAAAAAAAA	LRP1B	ENSG00000168702.18	transcript	ENST00000389484.8	protein_coding	32/90			chr2	TogoVar
LRP1B_chr2_140226423_142136016	141331522	C C	CTTTTCTT others(8): Show CTTTTCTTTCTTTCTT	intron_variant intron_variant	MODIFIER	HG01884.hp1 HG02965.hp2 HG01884.hp1 HG02965.hp2	a0002 a0004 a0002 a0004	a0002c0004 a0004c0021 a0002c0004 a0004c0021	a0002c0004t0004 a0004c0021t0001 a0002c0004t0004 a0004c0021t0001	a0002c0004t0004g0006 a0004c0021t0001g0026 a0002c0004t0004g0006 a0004c0021t0001g0026	2	28	0.0714	15	c.344 others(34): Show c.344-76882_344-76881insAAGAAAGAAAGAAAA	LRP1B	ENSG00000168702.18	transcript	ENST00000389484.8	protein_coding	3/90			chr2	TogoVar
LRP1B_chr2_140226423_142136016	141492079	G G	GAAAAAAA others(8): Show GAAAAAAAAAAAAAAA	intron_variant intron_variant	MODIFIER	HG02965.hp1 HG02965.hp1	a0001 a0001	a0001c0027 a0001c0027	a0001c0027t0001 a0001c0027t0001	a0001c0027t0001g0021 a0001c0027t0001g0021	1	28	0.0357	15	c.206 others(34): Show c.206-11547_206-11546insTTTTTTTTTTTTTTT	LRP1B	ENSG00000168702.18	transcript	ENST00000389484.8	protein_coding	2/90			chr2	TogoVar
LRP1B_chr2_140226423_142136016	141492079	G G	GAAAAAAA others(8): Show GAAAAAAAAAACAAAA	intron_variant intron_variant	MODIFIER	NA19240.hp2 NA19240.hp2	a0001 a0001	a0001c0013 a0001c0013	a0001c0013t0002 a0001c0013t0002	a0001c0013t0002g0012 a0001c0013t0002g0012	1	28	0.0357	15	c.206 others(34): Show c.206-11547_206-11546insTTTTGTTTTTTTTTT	LRP1B	ENSG00000168702.18	transcript	ENST00000389484.8	protein_coding	2/90			chr2	TogoVar
LRP1B_chr2_140226423_142136016	141492091	A A	AAAAAAAA others(8): Show AAAAAAAAAAAAAAAC	intron_variant intron_variant	MODIFIER	HG01884.hp2 HG02559.hp1 HG01884.hp2 HG02559.hp1	a0001 a0001	a0001c0016 a0001c0023 a0001c0016 a0001c0023	a0001c0016t0001 a0001c0023t0003 a0001c0016t0001 a0001c0023t0003	a0001c0016t0001g0011 a0001c0023t0003g0001 a0001c0016t0001g0011 a0001c0023t0003g0001	2	28	0.0714	15	c.206 others(34): Show c.206-11559_206-11558insGTTTTTTTTTTTTTT	LRP1B	ENSG00000168702.18	transcript	ENST00000389484.8	protein_coding	2/90			chr2	TogoVar
LRP1B_chr2_140226423_142136016	142134016	C C	CAAAAAAA others(8): Show CAAAAAAAAAAAAAAA	upstream_gene_variant upstream_gene_variant	MODIFIER	HG03516.hp1 HG03516.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0006 a0001c0001t0006	a0001c0001t0006g0024 a0001c0001t0006g0024	1	28	0.0357	15	c.-32 others(26): Show c.-3288_-3287insTTTTTTTTTTTTTTT	LRP1B	ENSG00000168702.18	transcript	ENST00000389484.8	protein_coding		3001		chr2	TogoVar
LRP1_chr12_57123483_57218361	57150189	C C	CTTTTTTT others(8): Show CTTTTTTTTTTTTTTT	intron_variant intron_variant	MODIFIER	HG02258.hp1 HG02258.hp1	a0001 a0001	a0001c0007 a0001c0007	a0001c0007t0006 a0001c0007t0006	a0001c0007t0006g0130 a0001c0007t0006g0130	1	276	0.0036	15	c.842 others(32): Show c.842-4013_842-3999dupTTTTTTTTTTTTTTT	LRP1	ENSG00000123384.14	transcript	ENST00000243077.8	protein_coding	6/88		INFO_REALIGN_3_PRIME	chr12	TogoVar
LRP2BP_chr4_185358872_185400924	185375487	A A	AAAAAAAA others(8): Show AAAAAAAAATATATAT	intron_variant intron_variant	MODIFIER	NA19079.hp2 NA19079.hp2	a0001 a0001	a0001c0003 a0001c0003	a0001c0003t0017 a0001c0003t0017	a0001c0003t0017g0026 a0001c0003t0017g0026	1	348	0.0029	15	c.330 others(30): Show c.330+125_330+126insATATATATTTTTTTT	LRP2BP	ENSG00000109771.16	transcript	ENST00000505916.6	protein_coding	4/8			chr4	TogoVar
LRP2BP_chr4_185358872_185400924	185375487	A A	AAAAATAT others(8): Show AAAAATATATATATAT	intron_variant intron_variant	MODIFIER	HG03130.hp2 NA18984.hp2 NA19090.hp1 HG03130.hp2 NA18984.hp2 NA19090.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0014 a0001c0001t0093 a0001c0001t0001 a0001c0001t0014 a0001c0001t0093	a0001c0001t0001g0165 a0001c0001t0014g0160 a0001c0001t0093g0231 a0001c0001t0001g0165 a0001c0001t0014g0160 a0001c0001t0093g0231	3	348	0.0086	15	c.330 others(30): Show c.330+125_330+126insATATATATATATTTT	LRP2BP	ENSG00000109771.16	transcript	ENST00000505916.6	protein_coding	4/8			chr4	TogoVar
LRP2BP_chr4_185358872_185400924	185375487	A A	AAATATAT others(8): Show AAATATATATATATAT	intron_variant intron_variant	MODIFIER	HG01106.hp2 HG04199.hp2 NA18960.hp1 others(1): Show HG01106.hp2 HG04199.hp2 NA18960.hp1 NA18960.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0004 a0001c0001t0014 others(1): Show a0001c0001t0001 a0001c0001t0004 a0001c0001t0014 a0001c0001t0029	a0001c0001t0001g0090 a0001c0001t0004g0306 a0001c0001t0014g0159 others(1): Show a0001c0001t0001g0090 a0001c0001t0004g0306 a0001c0001t0014g0159 a0001c0001t0029g0180	4	348	0.0115	15	c.330 others(30): Show c.330+125_330+126insATATATATATATATT	LRP2BP	ENSG00000109771.16	transcript	ENST00000505916.6	protein_coding	4/8			chr4	TogoVar
LRP2_chr2_169122109_169367534	169357289	T T	TTTTTATT others(8): Show TTTTTATTTTATTTTA	intron_variant intron_variant	MODIFIER	HG02970.hp2 HG02970.hp2	a0013 a0013	a0013c0101 a0013c0101	a0013c0101t0004 a0013c0101t0004	a0013c0101t0004g0013 a0013c0101t0004g0013	1	250	0.0040	15	c.79+ others(30): Show c.79+5017_79+5031dupTAAAATAAAATAAAA	LRP2	ENSG00000081479.15	transcript	ENST00000649046.1	protein_coding	1/78			chr2	TogoVar
LRP5_chr11_68307591_68454275	68341059	C C	CCTTTTTT others(8): Show CCTTTTTTTTTTTTTT	intron_variant intron_variant	MODIFIER	HG02970.hp1 HG02970.hp1	a0001 a0001	a0001c0041 a0001c0041	a0001c0041t0001 a0001c0041t0001	a0001c0041t0001g0087 a0001c0041t0001g0087	1	212	0.0047	15	c.92- others(30): Show c.92-6788_92-6787insCTTTTTTTTTTTTTT	LRP5	ENSG00000162337.12	transcript	ENST00000294304.12	protein_coding	1/22			chr11	TogoVar
LRP5_chr11_68307591_68454275	68341059	C C	CTTTTTTT others(8): Show CTTTTTTTTTTTTTTT	intron_variant intron_variant	MODIFIER	HG01167.hp1 HG01257.hp1 HG01258.hp1 others(10): Show HG01167.hp1 HG01257.hp1 HG01258.hp1 HG02818.hp1 HG03579.hp2 NA18941.hp1 NA18942.hp1 NA18946.hp2 NA18952.hp2 NA19030.hp2 NA19084.hp2 NA19091.hp2 NA21309.hp2	a0001 a0003 a0014 others(1): Show a0001 a0003 a0014 a0016	a0001c0002 a0001c0004 a0001c0007 others(3): Show a0001c0002 a0001c0004 a0001c0007 a0003c0006 a0014c0048 a0016c0044	a0001c0002t0001 a0001c0004t0001 a0001c0007t0001 others(3): Show a0001c0002t0001 a0001c0004t0001 a0001c0007t0001 a0003c0006t0001 a0014c0048t0001 a0016c0044t0001	a0001c0002t0001g0181 a0001c0002t0001g0182 a0001c0002t0001g0183 others(10): Show a0001c0002t0001g0181 a0001c0002t0001g0182 a0001c0002t0001g0183 a0001c0002t0001g0184 a0001c0002t0001g0189 a0001c0002t0001g0191 a0001c0002t0001g0192 a0001c0002t0001g0195 a0001c0004t0001g0123 a0001c0007t0001g0152 a0003c0006t0001g0023 a0014c0048t0001g0185 a0016c0044t0001g0140	13	212	0.0613	15	c.92- others(30): Show c.92-6783_92-6769dupTTTTTTTTTTTTTTT	LRP5	ENSG00000162337.12	transcript	ENST00000294304.12	protein_coding	1/22		INFO_REALIGN_3_PRIME	chr11	TogoVar
LRP5_chr11_68307591_68454275	68427971	T T	TTTATTTA others(8): Show TTTATTTATTTATTTA	intron_variant intron_variant	MODIFIER	HG02071.hp2 HG02071.hp2	a0001 a0001	a0001c0009 a0001c0009	a0001c0009t0001 a0001c0009t0001	a0001c0009t0001g0082 a0001c0009t0001g0082	1	212	0.0047	15	c.363 others(34): Show c.3638-1602_3638-1601insATTTATTTATTTATT	LRP5	ENSG00000162337.12	transcript	ENST00000294304.12	protein_coding	16/22		INFO_REALIGN_3_PRIME	chr11	TogoVar
LRP6_chr12_12111025_12272044	12255566	C C	CTTTTTTT others(8): Show CTTTTTTTTTTTTTTT	intron_variant intron_variant	MODIFIER	HG03195.hp2 HG03195.hp2	a0001 a0001	a0001c0003 a0001c0003	a0001c0003t0035 a0001c0003t0035	a0001c0003t0035g0210 a0001c0003t0035g0210	1	262	0.0038	15	c.56- others(32): Show c.56-10926_56-10912dupAAAAAAAAAAAAAAA	LRP6	ENSG00000070018.9	transcript	ENST00000261349.9	protein_coding	1/22			chr12	TogoVar
LRP6_chr12_12111025_12272044	12257779	C C	CAAAAAAA others(8): Show CAAAAAAAAAAAAAAA	intron_variant intron_variant	MODIFIER	HG00558.hp2 HG02083.hp1 NA18945.hp1 HG00558.hp2 HG02083.hp1 NA18945.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0023 a0001c0001t0032 a0001c0001t0001 a0001c0001t0023 a0001c0001t0032	a0001c0001t0001g0160 a0001c0001t0023g0024 a0001c0001t0032g0256 a0001c0001t0001g0160 a0001c0001t0023g0024 a0001c0001t0032g0256	3	262	0.0115	15	c.55+ others(30): Show c.55+8887_55+8901dupTTTTTTTTTTTTTTT	LRP6	ENSG00000070018.9	transcript	ENST00000261349.9	protein_coding	1/22			chr12	TogoVar
LRP8_chr1_53237364_53333070	53237673	C C	CAAAAAAA others(8): Show CAAAAAAAAAAAAAAA	downstream_gene_variant downstream_gene_variant	MODIFIER	HG00140.hp1 HG00423.hp2 HG00558.hp1 others(20): Show HG00140.hp1 HG00423.hp2 HG00558.hp1 HG01071.hp1 HG01099.hp1 HG01123.hp2 HG01243.hp2 HG01258.hp2 HG01361.hp1 HG02040.hp2 HG02109.hp2 HG02135.hp1 HG03831.hp1 NA18747.hp1 NA18747.hp2 NA18948.hp2 NA18951.hp1 NA18960.hp2 NA19056.hp2 NA19065.hp2 NA19076.hp1 NA19085.hp2 homoSapiens_chm13v2.hp1	a0001 a0002 a0003 others(4): Show a0001 a0002 a0003 a0004 a0007 a0008 a0012	a0001c0004 a0002c0003 a0003c0005 others(4): Show a0001c0004 a0002c0003 a0003c0005 a0004c0007 a0007c0011 a0008c0016 a0012c0015	a0001c0004t0002 a0001c0004t0027 a0001c0004t0029 others(8): Show a0001c0004t0002 a0001c0004t0027 a0001c0004t0029 a0002c0003t0002 a0002c0003t0057 a0003c0005t0002 a0004c0007t0002 a0004c0007t0006 a0007c0011t0002 a0008c0016t0029 a0012c0015t0006	a0001c0004t0002g0169 a0001c0004t0002g0176 a0001c0004t0002g0195 others(20): Show a0001c0004t0002g0169 a0001c0004t0002g0176 a0001c0004t0002g0195 a0001c0004t0002g0217 a0001c0004t0002g0264 a0001c0004t0027g0190 a0001c0004t0029g0150 a0002c0003t0002g0040 a0002c0003t0002g0050 a0002c0003t0002g0071 a0002c0003t0002g0131 a0002c0003t0057g0082 a0003c0005t0002g0029 a0003c0005t0002g0038 a0003c0005t0002g0094 a0003c0005t0002g0126 a0004c0007t0002g0147 a0004c0007t0002g0237 a0004c0007t0002g0240 a0004c0007t0006g0236 a0007c0011t0002g0002 a0008c0016t0029g0056 a0012c0015t0006g0129	23	296	0.0777	15	c.93 others(26): Show c.9330_*9344dupTTTTTTTTTTTTTTT	LRP8	ENSG00000157193.18	transcript	ENST00000306052.12	protein_coding		4690		chr1	TogoVar
LRPPRC_chr2_43881224_44000989	43889314	C C	CAAAAAAA others(8): Show CAAAAAAAAAAAAAAA	intron_variant intron_variant	MODIFIER	HG02572.hp1 HG03041.hp1 HG02572.hp1 HG03041.hp1	a0004 a0004	a0004c0004 a0004c0004	a0004c0004t0012 a0004c0004t0019 a0004c0004t0012 a0004c0004t0019	a0004c0004t0012g0102 a0004c0004t0019g0106 a0004c0004t0012g0102 a0004c0004t0019g0106	2	358	0.0056	15	c.412 others(32): Show c.4128+405_4128+419dupTTTTTTTTTTTTTTT	LRPPRC	ENSG00000138095.20	transcript	ENST00000260665.12	protein_coding	37/37			chr2	TogoVar
LRPPRC_chr2_43881224_44000989	43971485	T T	TAAAAAAA others(8): Show TAAAAAAAAAAAAAAA	intron_variant intron_variant	MODIFIER	HG00642.hp1 HG02486.hp2 HG03098.hp2 others(3): Show HG00642.hp1 HG02486.hp2 HG03098.hp2 HG03471.hp2 NA18522.hp2 NA18906.hp2	a0001 a0004 a0001 a0004	a0001c0003 a0004c0004 a0001c0003 a0004c0004	a0001c0003t0008 a0004c0004t0012 a0004c0004t0019 a0001c0003t0008 a0004c0004t0012 a0004c0004t0019	a0001c0003t0008g0086 a0001c0003t0008g0100 a0004c0004t0012g0091 others(3): Show a0001c0003t0008g0086 a0001c0003t0008g0100 a0004c0004t0012g0091 a0004c0004t0012g0092 a0004c0004t0019g0093 a0004c0004t0019g0096	6	358	0.0168	15	c.136 others(34): Show c.1369+2107_1369+2121dupTTTTTTTTTTTTTTT	LRPPRC	ENSG00000138095.20	transcript	ENST00000260665.12	protein_coding	11/37			chr2	TogoVar
LRRC10_chr12_69603564_69615907	69614651	G G	GTTTTTTT others(8): Show GTTTTTTTTTTTTTTT	upstream_gene_variant upstream_gene_variant	MODIFIER	HG03453.hp2 NA19240.hp2 HG03453.hp2 NA19240.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0005 a0001c0001t0005	a0001c0001t0005g0000 a0001c0001t0005g0000	2	430	0.0047	15	c.-38 others(26): Show c.-3814_-3813insAAAAAAAAAAAAAAA	LRRC10	ENSG00000198812.5	transcript	ENST00000361484.5	protein_coding		3745		chr12	TogoVar
LRRC10_chr12_69603564_69615907	69614652	C C	CTTTTTTT others(8): Show CTTTTTTTTTTTTTTT	upstream_gene_variant upstream_gene_variant	MODIFIER	HG01109.hp2 HG01884.hp1 HG02055.hp1 others(14): Show HG01109.hp2 HG01884.hp1 HG02055.hp1 HG02145.hp2 HG02559.hp1 HG02559.hp2 HG02572.hp2 HG02615.hp1 HG02630.hp1 HG02647.hp1 HG02723.hp1 HG02965.hp1 HG03041.hp2 HG03098.hp1 HG03130.hp2 HG03579.hp1 HG06807.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0002 a0001c0001t0005 others(1): Show a0001c0001t0001 a0001c0001t0002 a0001c0001t0005 a0001c0001t0007	a0001c0001t0001g0000 a0001c0001t0002g0000 a0001c0001t0005g0000 others(1): Show a0001c0001t0001g0000 a0001c0001t0002g0000 a0001c0001t0005g0000 a0001c0001t0007g0000	17	430	0.0395	15	c.-38 others(26): Show c.-3815_-3814insAAAAAAAAAAAAAAA	LRRC10	ENSG00000198812.5	transcript	ENST00000361484.5	protein_coding		3746		chr12	TogoVar
LRRC20_chr10_70293975_70387625	70311222	A A	ATTTTTTT others(8): Show ATTTTTTTTTTTTTTT	intron_variant intron_variant	MODIFIER	HG01256.hp2 HG01258.hp2 HG01256.hp2 HG01258.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0006 a0001c0001t0001g0006	2	378	0.0053	15	c.401 others(32): Show c.401-9729_401-9715dupAAAAAAAAAAAAAAA	LRRC20	ENSG00000172731.15	transcript	ENST00000446961.4	protein_coding	4/4			chr10	TogoVar
LRRC20_chr10_70293975_70387625	70350132	A A	ATGATTAG others(8): Show ATGATTAGCATCATTT	intron_variant intron_variant	MODIFIER	HG01243.hp1 HG02451.hp2 HG02559.hp2 others(9): Show HG01243.hp1 HG02451.hp2 HG02559.hp2 HG02622.hp2 HG02717.hp1 HG02809.hp1 HG02818.hp1 HG02976.hp2 HG03453.hp2 HG03516.hp2 NA20129.hp1 NA21309.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0015 a0001c0001t0016 others(4): Show a0001c0001t0001 a0001c0001t0015 a0001c0001t0016 a0001c0001t0017 a0001c0001t0023 a0001c0001t0024 a0001c0001t0048	a0001c0001t0001g0182 a0001c0001t0015g0208 a0001c0001t0015g0209 others(8): Show a0001c0001t0001g0182 a0001c0001t0015g0208 a0001c0001t0015g0209 a0001c0001t0016g0214 a0001c0001t0016g0215 a0001c0001t0017g0007 a0001c0001t0017g0364 a0001c0001t0017g0365 a0001c0001t0023g0348 a0001c0001t0024g0347 a0001c0001t0048g0368	12	378	0.0318	15	c.83- others(30): Show c.83-9431_83-9430insAAATGATGCTAATCA	LRRC20	ENSG00000172731.15	transcript	ENST00000446961.4	protein_coding	2/4			chr10	TogoVar
LRRC20_chr10_70293975_70387625	70364599	A A	ACACCCAG others(8): Show ACACCCAGCAACAGCT	intron_variant intron_variant	MODIFIER	HG00280.hp1 HG00408.hp1 HG00609.hp2 others(18): Show HG00280.hp1 HG00408.hp1 HG00609.hp2 HG00735.hp2 HG02109.hp2 HG02129.hp2 HG03490.hp2 HG03492.hp1 NA18946.hp2 NA18947.hp1 NA18947.hp2 NA18948.hp2 NA18960.hp1 NA18960.hp2 NA18962.hp2 NA18978.hp2 NA18986.hp1 NA19007.hp2 NA19011.hp2 NA19012.hp1 NA19070.hp2	a0001 a0003 a0001 a0003	a0001c0001 a0003c0003 a0001c0001 a0003c0003	a0001c0001t0001 a0001c0001t0004 a0001c0001t0005 others(4): Show a0001c0001t0001 a0001c0001t0004 a0001c0001t0005 a0001c0001t0006 a0001c0001t0014 a0001c0001t0039 a0003c0003t0004	a0001c0001t0001g0004 a0001c0001t0001g0186 a0001c0001t0001g0274 others(17): Show a0001c0001t0001g0004 a0001c0001t0001g0186 a0001c0001t0001g0274 a0001c0001t0004g0180 a0001c0001t0004g0187 a0001c0001t0004g0188 a0001c0001t0004g0262 a0001c0001t0004g0264 a0001c0001t0004g0265 a0001c0001t0004g0267 a0001c0001t0004g0269 a0001c0001t0004g0271 a0001c0001t0004g0286 a0001c0001t0005g0266 a0001c0001t0005g0273 a0001c0001t0006g0272 a0001c0001t0014g0270 a0001c0001t0014g0275 a0001c0001t0039g0263 a0003c0003t0004g0316	21	378	0.0556	15	c.82+ others(32): Show c.82+11838_82+11852dupAGCTGTTGCTGGGTG	LRRC20	ENSG00000172731.15	transcript	ENST00000446961.4	protein_coding	2/4			chr10	TogoVar
LRRC23_chr12_6899822_6919229	6901494	C C	CAAAAAAA others(8): Show CAAAAAAAAAAAAAAA	upstream_gene_variant upstream_gene_variant	MODIFIER	HG02486.hp2 HG02486.hp2	a0005 a0005	a0005c0005 a0005c0005	a0005c0005t0003 a0005c0005t0003	a0005c0005t0003g0039 a0005c0005t0003g0039	1	316	0.0032	15	c.-36 others(26): Show c.-3631_-3630insAAAAAAAAAAAAAAA	LRRC23	ENSG00000010626.15	transcript	ENST00000443597.7	protein_coding		3327		chr12	TogoVar
LRRC23_chr12_6899822_6919229	6909031	T T	TATTATAT others(8): Show TATTATATATTATATA	intron_variant intron_variant	MODIFIER	HG03927.hp2 HG03927.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0065 a0001c0001t0001g0065	1	316	0.0032	15	c.622 others(30): Show c.622-843_622-829dupATTATATATTATATA	LRRC23	ENSG00000010626.15	transcript	ENST00000443597.7	protein_coding	5/7		INFO_REALIGN_3_PRIME	chr12	TogoVar
LRRC25_chr19_18386137_18402622	18387812	C C	CTTTTTTT others(8): Show CTTTTTTTTTTTTTTT	downstream_gene_variant downstream_gene_variant	MODIFIER	HG01192.hp1 HG01192.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0002 a0001c0001t0002	a0001c0001t0002g0001 a0001c0001t0002g0001	1	434	0.0023	15	c.41 others(26): Show c.4174_*4175insAAAAAAAAAAAAAAA	LRRC25	ENSG00000175489.10	transcript	ENST00000339007.4	protein_coding		3324		chr19	TogoVar
LRRC25_chr19_18386137_18402622	18387813	C C	CTTTTTTT others(8): Show CTTTTTTTTTTTTTTT	downstream_gene_variant downstream_gene_variant	MODIFIER	HG00140.hp2 HG01069.hp1 HG01069.hp2 others(18): Show HG00140.hp2 HG01069.hp1 HG01069.hp2 HG01071.hp1 HG01081.hp2 HG01109.hp2 HG01256.hp1 HG01358.hp1 HG01361.hp1 HG01943.hp1 HG02055.hp2 HG02109.hp2 HG02451.hp1 HG02717.hp2 HG02723.hp1 HG02895.hp2 HG03041.hp1 NA19043.hp1 NA19057.hp1 NA20129.hp1 NA20300.hp1	a0001 a0006 a0001 a0006	a0001c0001 a0006c0009 a0001c0001 a0006c0009	a0001c0001t0002 a0001c0001t0004 a0001c0001t0017 others(1): Show a0001c0001t0002 a0001c0001t0004 a0001c0001t0017 a0006c0009t0018	a0001c0001t0002g0001 a0001c0001t0002g0003 a0001c0001t0002g0013 others(11): Show a0001c0001t0002g0001 a0001c0001t0002g0003 a0001c0001t0002g0013 a0001c0001t0002g0017 a0001c0001t0002g0033 a0001c0001t0002g0074 a0001c0001t0004g0009 a0001c0001t0004g0012 a0001c0001t0004g0021 a0001c0001t0004g0031 a0001c0001t0004g0044 a0001c0001t0004g0094 a0001c0001t0017g0073 a0006c0009t0018g0156	21	434	0.0484	15	c.41 others(26): Show c.4159_*4173dupAAAAAAAAAAAAAAA	LRRC25	ENSG00000175489.10	transcript	ENST00000339007.4	protein_coding		3323		chr19	TogoVar
LRRC25_chr19_18386137_18402622	18399602	C C	CAATAATA others(8): Show CAATAATAATAATAAT	upstream_gene_variant upstream_gene_variant	MODIFIER	HG00642.hp1 HG02004.hp2 HG02109.hp1 others(1): Show HG00642.hp1 HG02004.hp2 HG02109.hp1 HG02818.hp1	a0001 a0002 a0001 a0002	a0001c0001 a0002c0002 a0001c0001 a0002c0002	a0001c0001t0004 a0002c0002t0001 a0001c0001t0004 a0002c0002t0001	a0001c0001t0004g0041 a0001c0001t0004g0112 a0002c0002t0001g0002 others(1): Show a0001c0001t0004g0041 a0001c0001t0004g0112 a0002c0002t0001g0002 a0002c0002t0001g0005	4	434	0.0092	15	c.-26 others(26): Show c.-2640_-2639insATTATTATTATTATT	LRRC25	ENSG00000175489.10	transcript	ENST00000339007.4	protein_coding		1981		chr19	TogoVar
LRRC27_chr10_132327193_132386508	132364576	C C	CTTACACC others(8): Show CTTACACCCACCCTTA	intron_variant intron_variant	MODIFIER	HG01070.hp2 HG01070.hp2	a0002 a0002	a0002c0004 a0002c0004	a0002c0004t0010 a0002c0004t0010	a0002c0004t0010g0017 a0002c0004t0010g0017	1	290	0.0035	15	c.129 others(32): Show c.1290-848_1290-847insTTACACCCACCCTTA	LRRC27	ENSG00000148814.18	transcript	ENST00000368614.8	protein_coding	9/10			chr10	TogoVar
LRRC27_chr10_132327193_132386508	132364576	C C	CTTACACC others(8): Show CTTACACCCACGCTTA	intron_variant intron_variant	MODIFIER	HG02965.hp2 HG02965.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0047 a0001c0001t0047	a0001c0001t0047g0286 a0001c0001t0047g0286	1	290	0.0035	15	c.129 others(32): Show c.1290-848_1290-847insTTACACCCACGCTTA	LRRC27	ENSG00000148814.18	transcript	ENST00000368614.8	protein_coding	9/10			chr10	TogoVar
LRRC27_chr10_132327193_132386508	132364695	C C	CTCACACC others(8): Show CTCACACCCACCCTTA	intron_variant intron_variant	MODIFIER	NA20752.hp1 NA20752.hp1	a0002 a0002	a0002c0004 a0002c0004	a0002c0004t0010 a0002c0004t0010	a0002c0004t0010g0013 a0002c0004t0010g0013	1	290	0.0035	15	c.129 others(32): Show c.1290-729_1290-728insTCACACCCACCCTTA	LRRC27	ENSG00000148814.18	transcript	ENST00000368614.8	protein_coding	9/10			chr10	TogoVar
LRRC27_chr10_132327193_132386508	132364695	C C	CTCACACC others(8): Show CTCACACCCACGCTTA	intron_variant intron_variant	MODIFIER	HG02622.hp2 HG02622.hp2	a0001 a0001	a0001c0003 a0001c0003	a0001c0003t0006 a0001c0003t0006	a0001c0003t0006g0096 a0001c0003t0006g0096	1	290	0.0035	15	c.129 others(32): Show c.1290-729_1290-728insTCACACCCACGCTTA	LRRC27	ENSG00000148814.18	transcript	ENST00000368614.8	protein_coding	9/10			chr10	TogoVar
LRRC27_chr10_132327193_132386508	132364695	C C	CTTACACC others(8): Show CTTACACCCACCCTTA	intron_variant intron_variant	MODIFIER	HG03516.hp2 HG04228.hp2 HG03516.hp2 HG04228.hp2	a0001 a0002 a0001 a0002	a0001c0009 a0002c0004 a0001c0009 a0002c0004	a0001c0009t0002 a0002c0004t0022 a0001c0009t0002 a0002c0004t0022	a0001c0009t0002g0283 a0002c0004t0022g0012 a0001c0009t0002g0283 a0002c0004t0022g0012	2	290	0.0069	15	c.129 others(32): Show c.1290-729_1290-728insTTACACCCACCCTTA	LRRC27	ENSG00000148814.18	transcript	ENST00000368614.8	protein_coding	9/10			chr10	TogoVar
LRRC27_chr10_132327193_132386508	132364695	C C	CTTACACC others(8): Show CTTACACCCACGCTTA	intron_variant intron_variant	MODIFIER	HG01943.hp2 HG01943.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0176 a0001c0001t0001g0176	1	290	0.0035	15	c.129 others(32): Show c.1290-729_1290-728insTTACACCCACGCTTA	LRRC27	ENSG00000148814.18	transcript	ENST00000368614.8	protein_coding	9/10			chr10	TogoVar
LRRC28_chr15_99246481_99395729	99282177	G G	GTTTTTTT others(8): Show GTTTTTTTTTTTTTTT	intron_variant intron_variant	MODIFIER	HG00323.hp1 HG01069.hp2 HG01071.hp2 others(10): Show HG00323.hp1 HG01069.hp2 HG01071.hp2 HG01123.hp1 HG01261.hp2 HG01891.hp2 HG02055.hp1 HG02257.hp1 HG02559.hp1 HG02922.hp1 HG03486.hp2 HG03540.hp1 HG04184.hp1	a0001 a0002 a0001 a0002	a0001c0001 a0002c0002 a0001c0001 a0002c0002	a0001c0001t0016 a0001c0001t0018 a0001c0001t0020 others(8): Show a0001c0001t0016 a0001c0001t0018 a0001c0001t0020 a0001c0001t0069 a0001c0001t0075 a0001c0001t0076 a0001c0001t0083 a0001c0001t0123 a0001c0001t0130 a0001c0001t0173 a0002c0002t0065	a0001c0001t0016g0064 a0001c0001t0016g0065 a0001c0001t0018g0315 others(10): Show a0001c0001t0016g0064 a0001c0001t0016g0065 a0001c0001t0018g0315 a0001c0001t0020g0313 a0001c0001t0020g0314 a0001c0001t0069g0290 a0001c0001t0075g0304 a0001c0001t0076g0305 a0001c0001t0083g0017 a0001c0001t0123g0309 a0001c0001t0130g0317 a0001c0001t0173g0311 a0002c0002t0065g0312	13	332	0.0392	15	c.210 others(32): Show c.210-5066_210-5065insTTTTTTTTTTTTTTT	LRRC28	ENSG00000168904.15	transcript	ENST00000301981.8	protein_coding	3/9		INFO_REALIGN_3_PRIME	chr15	TogoVar
LRRC28_chr15_99246481_99395729	99293593	C C	CAAAAAAA others(8): Show CAAAAAAAAAAAAAAA	intron_variant intron_variant	MODIFIER	HG01081.hp2 HG02602.hp2 HG01081.hp2 HG02602.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0092 a0001c0001t0142 a0001c0001t0092 a0001c0001t0142	a0001c0001t0092g0196 a0001c0001t0142g0083 a0001c0001t0092g0196 a0001c0001t0142g0083	2	332	0.0060	15	c.385 others(32): Show c.385+5668_385+5682dupAAAAAAAAAAAAAAA	LRRC28	ENSG00000168904.15	transcript	ENST00000301981.8	protein_coding	5/9		INFO_REALIGN_3_PRIME	chr15	TogoVar
LRRC28_chr15_99246481_99395729	99293593	C C	CCAAAAAA others(8): Show CCAAAAAAAAAAAAAA	intron_variant intron_variant	MODIFIER	HG03540.hp1 HG03540.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0069 a0001c0001t0069	a0001c0001t0069g0290 a0001c0001t0069g0290	1	332	0.0030	15	c.385 others(32): Show c.385+5642_385+5643insCAAAAAAAAAAAAAA	LRRC28	ENSG00000168904.15	transcript	ENST00000301981.8	protein_coding	5/9			chr15	TogoVar
LRRC2_chr3_46510385_46571302	46543618	T T	TTAATAAT others(8): Show TTAATAATAATAATAA	intron_variant intron_variant	MODIFIER	HG02015.hp2 HG02055.hp2 HG02451.hp1 HG02015.hp2 HG02055.hp2 HG02451.hp1	a0003 a0005 a0003 a0005	a0003c0003 a0005c0005 a0003c0003 a0005c0005	a0003c0003t0009 a0005c0005t0028 a0005c0005t0031 a0003c0003t0009 a0005c0005t0028 a0005c0005t0031	a0003c0003t0009g0056 a0005c0005t0028g0041 a0005c0005t0031g0040 a0003c0003t0009g0056 a0005c0005t0028g0041 a0005c0005t0031g0040	3	364	0.0082	15	c.333 others(32): Show c.333+1413_333+1427dupTTATTATTATTATTA	LRRC2	ENSG00000163827.14	transcript	ENST00000395905.8	protein_coding	3/8			chr3	TogoVar
LRRC36_chr16_67321815_67390204	67325376	C C	CTTTATTT others(8): Show CTTTATTTTATTTTAT	upstream_gene_variant upstream_gene_variant	MODIFIER	HG02896.hp2 HG03195.hp1 HG03540.hp2 others(3): Show HG02896.hp2 HG03195.hp1 HG03540.hp2 HG06807.hp1 HG06807.hp2 NA19240.hp1	a0001 a0002 a0001 a0002	a0001c0001 a0002c0002 a0002c0004 a0001c0001 a0002c0002 a0002c0004	a0001c0001t0001 a0001c0001t0003 a0002c0002t0002 others(1): Show a0001c0001t0001 a0001c0001t0003 a0002c0002t0002 a0002c0004t0002	a0001c0001t0001g0060 a0001c0001t0003g0180 a0002c0002t0002g0183 others(3): Show a0001c0001t0001g0060 a0001c0001t0003g0180 a0002c0002t0002g0183 a0002c0002t0002g0184 a0002c0002t0002g0185 a0002c0004t0002g0032	6	194	0.0309	15	c.-14 others(26): Show c.-1487_-1486insTTTATTTTATTTTAT	LRRC36	ENSG00000159708.18	transcript	ENST00000329956.11	protein_coding		1438		chr16	TogoVar
LRRC37A2_chr17_46507468_46560646	46547156	C C	CTTTTTTT others(8): Show CTTTTTTTTTTTTTTT	intron_variant intron_variant	MODIFIER	HG02559.hp1 HG02615.hp1 HG02559.hp1 HG02615.hp1	a0009 a0018 a0009 a0018	a0009c0009 a0018c0026 a0009c0009 a0018c0026	a0009c0009t0001 a0018c0026t0001 a0009c0009t0001 a0018c0026t0001	a0009c0009t0001g0015 a0018c0026t0001g0005 a0009c0009t0001g0015 a0018c0026t0001g0005	2	109	0.0184	15	c.317 others(32): Show c.3172+792_3172+806dupTTTTTTTTTTTTTTT	LRRC37A2	ENSG00000238083.10	transcript	ENST00000576629.6	protein_coding	8/13		INFO_REALIGN_3_PRIME	chr17	TogoVar

Search by Variant

Search

Search Results