Joint Open Genome and Omics Platform (JoGo)

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Snpeff annotation impact

Snpeff annotation impact detail

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regionname	pos	ref	alt	annotation	impact	samples	ahapids	chapids	thapids	thapids	ac	an	af	len	hgvs_c	genename	geneid	featuretype	featureid	transcript_biotype	rank	distance	status	chr	external
LRRC38_chr1_13469973_13519003	13504751	G G	GGGGAGGG others(8): Show GGGGAGGGGAGGGGAA	intron_variant intron_variant	MODIFIER	HG03209.hp2 NA19043.hp2 HG03209.hp2 NA19043.hp2	a0003 a0003	a0003c0004 a0003c0004	a0003c0004t0001 a0003c0004t0001	a0003c0004t0001g0316 a0003c0004t0001g0317 a0003c0004t0001g0316 a0003c0004t0001g0317	2	448	0.0045	15	c.631 others(32): Show c.631+8197_631+8211dupTTCCCCTCCCCTCCC	LRRC38	ENSG00000162494.6	transcript	ENST00000376085.4	protein_coding	1/1			chr1	TogoVar
LRRC40_chr1_70139805_70210579	70187838	G G	GGAAGAGA others(8): Show GGAAGAGAAGAGAAGA	intron_variant intron_variant	MODIFIER	HG00597.hp1 HG01074.hp2 HG01167.hp2 others(37): Show HG00597.hp1 HG01074.hp2 HG01167.hp2 HG01928.hp1 HG01975.hp1 HG01978.hp1 HG02055.hp2 HG02080.hp1 HG02145.hp2 HG02280.hp1 HG02523.hp1 HG02523.hp2 HG02559.hp2 HG02572.hp1 HG02895.hp2 HG03130.hp2 HG03486.hp1 HG03516.hp1 HG03710.hp2 HG03831.hp2 HG03927.hp2 NA18522.hp1 NA18906.hp1 NA18952.hp2 NA18965.hp1 NA18972.hp1 NA18972.hp2 NA18992.hp2 NA18995.hp1 NA18999.hp2 NA19011.hp2 NA19030.hp2 NA19060.hp1 NA19064.hp2 NA19066.hp2 NA19067.hp2 NA19086.hp1 NA19087.hp1 NA19240.hp2 NA20752.hp1	a0001 a0008 a0001 a0008	a0001c0001 a0001c0002 a0008c0009 a0001c0001 a0001c0002 a0008c0009	a0001c0001t0001 a0001c0001t0002 a0001c0001t0003 others(2): Show a0001c0001t0001 a0001c0001t0002 a0001c0001t0003 a0001c0002t0002 a0008c0009t0001	a0001c0001t0001g0011 a0001c0001t0001g0107 a0001c0001t0001g0112 others(35): Show a0001c0001t0001g0011 a0001c0001t0001g0107 a0001c0001t0001g0112 a0001c0001t0001g0113 a0001c0001t0001g0124 a0001c0001t0001g0128 a0001c0001t0001g0151 a0001c0001t0001g0152 a0001c0001t0001g0153 a0001c0001t0001g0154 a0001c0001t0001g0155 a0001c0001t0001g0156 a0001c0001t0002g0015 a0001c0001t0002g0167 a0001c0001t0002g0188 a0001c0001t0002g0203 a0001c0001t0002g0223 a0001c0001t0002g0227 a0001c0001t0002g0234 a0001c0001t0002g0240 a0001c0001t0002g0242 a0001c0001t0002g0243 a0001c0001t0002g0251 a0001c0001t0002g0252 a0001c0001t0002g0259 a0001c0001t0002g0260 a0001c0001t0002g0264 a0001c0001t0002g0266 a0001c0001t0002g0281 a0001c0001t0002g0282 a0001c0001t0002g0285 a0001c0001t0002g0288 a0001c0001t0002g0289 a0001c0001t0003g0291 a0001c0001t0003g0292 a0001c0002t0002g0017 a0001c0002t0002g0177 a0008c0009t0001g0121	40	320	0.1250	15	c.334 others(30): Show c.334-515_334-501dupTCTTCTCTTCTCTTC	LRRC40	ENSG00000066557.6	transcript	ENST00000370952.4	protein_coding	2/14			chr1	TogoVar
LRRC40_chr1_70139805_70210579	70190677	T T	TAAAAAAA others(8): Show TAAAAAAAAAAAAAAA	intron_variant intron_variant	MODIFIER	HG02486.hp1 HG03195.hp2 HG02486.hp1 HG03195.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0002 a0001c0001t0001 a0001c0001t0002	a0001c0001t0001g0130 a0001c0001t0002g0298 a0001c0001t0001g0130 a0001c0001t0002g0298	2	320	0.0063	15	c.152 others(32): Show c.152-1419_152-1405dupTTTTTTTTTTTTTTT	LRRC40	ENSG00000066557.6	transcript	ENST00000370952.4	protein_coding	1/14			chr1	TogoVar
LRRC41_chr1_46272462_46308616	46299878	C C	CAAATAAA others(8): Show CAAATAAAATAAAATA	intron_variant intron_variant	MODIFIER	HG00544.hp1 HG02055.hp1 HG03834.hp2 others(1): Show HG00544.hp1 HG02055.hp1 HG03834.hp2 NA18959.hp2	a0001 a0003 a0001 a0003	a0001c0001 a0003c0003 a0001c0001 a0003c0003	a0001c0001t0001 a0001c0001t0003 a0003c0003t0003 a0001c0001t0001 a0001c0001t0003 a0003c0003t0003	a0001c0001t0001g0222 a0001c0001t0003g0225 a0003c0003t0003g0228 others(1): Show a0001c0001t0001g0222 a0001c0001t0003g0225 a0003c0003t0003g0228 a0003c0003t0003g0229	4	370	0.0108	15	c.200 others(32): Show c.200-1523_200-1509dupTATTTTATTTTATTT	LRRC41	ENSG00000132128.18	transcript	ENST00000617190.5	protein_coding	1/9			chr1	TogoVar
LRRC47_chr1_3773559_3801498	3799550	C C	CAAAAAAA others(8): Show CAAAAAAAAAAAAAAA	upstream_gene_variant upstream_gene_variant	MODIFIER	HG02129.hp2 HG02129.hp2	a0002 a0002	a0002c0005 a0002c0005	a0002c0005t0006 a0002c0005t0006	a0002c0005t0006g0029 a0002c0005t0006g0029	1	412	0.0024	15	c.-30 others(26): Show c.-3075_-3074insTTTTTTTTTTTTTTT	LRRC47	ENSG00000130764.10	transcript	ENST00000378251.3	protein_coding		3053		chr1	TogoVar
LRRC4C_chr11_40109209_41464652	40355953	T T	TGTATAGT others(8): Show TGTATAGTATAGTATA	intron_variant intron_variant	MODIFIER	HG02622.hp1 HG02717.hp1 HG03540.hp2 others(2): Show HG02622.hp1 HG02717.hp1 HG03540.hp2 HG03579.hp2 NA20129.hp1	a0001 a0001	a0001c0001 a0001c0002 a0001c0001 a0001c0002	a0001c0001t0001 a0001c0001t0002 a0001c0002t0001 a0001c0001t0001 a0001c0001t0002 a0001c0002t0001	a0001c0001t0001g0031 a0001c0001t0001g0040 a0001c0001t0001g0047 others(2): Show a0001c0001t0001g0031 a0001c0001t0001g0040 a0001c0001t0001g0047 a0001c0001t0002g0016 a0001c0002t0001g0011	5	48	0.1042	15	c.-26 others(36): Show c.-269-36247_-269-36233dupTATACTATACTATAC	LRRC4C	ENSG00000148948.8	transcript	ENST00000528697.6	protein_coding	3/6			chr11	TogoVar
LRRC4C_chr11_40109209_41464652	40383920	A A	AATTATTA others(8): Show AATTATTATTATTATT	intron_variant intron_variant	MODIFIER	HG02055.hp2 NA18989.hp2 HG02055.hp2 NA18989.hp2	a0001 a0001	a0001c0001 a0001c0002 a0001c0001 a0001c0002	a0001c0001t0001 a0001c0002t0002 a0001c0001t0001 a0001c0002t0002	a0001c0001t0001g0037 a0001c0002t0002g0008 a0001c0001t0001g0037 a0001c0002t0002g0008	2	48	0.0417	15	c.-26 others(36): Show c.-269-64214_-269-64200dupAATAATAATAATAAT	LRRC4C	ENSG00000148948.8	transcript	ENST00000528697.6	protein_coding	3/6			chr11	TogoVar
LRRC4C_chr11_40109209_41464652	40630330	C C	CTCTTCTT others(8): Show CTCTTCTTCTTCTTCT	intron_variant intron_variant	MODIFIER	HG03139.hp1 HG03139.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0002 a0001c0001t0002	a0001c0001t0002g0019 a0001c0001t0002g0019	1	48	0.0208	15	c.-27 others(36): Show c.-270+17797_-270+17811dupAGAAGAAGAAGAAGA	LRRC4C	ENSG00000148948.8	transcript	ENST00000528697.6	protein_coding	3/6			chr11	TogoVar
LRRC4C_chr11_40109209_41464652	40858016	A A	AGGAAGGG others(8): Show AGGAAGGGAAGGGAAG	intron_variant intron_variant	MODIFIER	HG01074.hp2 HG02698.hp2 HG03139.hp1 HG01074.hp2 HG02698.hp2 HG03139.hp1	a0001 a0001	a0001c0001 a0001c0002 a0001c0001 a0001c0002	a0001c0001t0002 a0001c0002t0002 a0001c0001t0002 a0001c0002t0002	a0001c0001t0002g0019 a0001c0001t0002g0036 a0001c0002t0002g0012 a0001c0001t0002g0019 a0001c0001t0002g0036 a0001c0002t0002g0012	3	48	0.0625	15	c.-40 others(36): Show c.-407+75604_-407+75618dupCTTCCCTTCCCTTCC	LRRC4C	ENSG00000148948.8	transcript	ENST00000528697.6	protein_coding	2/6			chr11	TogoVar
LRRC4C_chr11_40109209_41464652	40898353	C C	CAAAAAAA others(8): Show CAAAAAAAAAAAAAAA	intron_variant intron_variant	MODIFIER	HG02280.hp2 HG02280.hp2	a0001 a0001	a0001c0002 a0001c0002	a0001c0002t0001 a0001c0002t0001	a0001c0002t0001g0030 a0001c0002t0001g0030	1	48	0.0208	15	c.-40 others(36): Show c.-407+35267_-407+35281dupTTTTTTTTTTTTTTT	LRRC4C	ENSG00000148948.8	transcript	ENST00000528697.6	protein_coding	2/6			chr11	TogoVar
LRRC4C_chr11_40109209_41464652	40984893	C C	CTTTTTTT others(8): Show CTTTTTTTTTTTTTTT	intron_variant intron_variant	MODIFIER	HG02055.hp1 NA18989.hp1 HG02055.hp1 NA18989.hp1	a0001 a0001	a0001c0001 a0001c0002 a0001c0001 a0001c0002	a0001c0001t0002 a0001c0002t0001 a0001c0001t0002 a0001c0002t0001	a0001c0001t0002g0034 a0001c0002t0001g0022 a0001c0001t0002g0034 a0001c0002t0001g0022	2	48	0.0417	15	c.-49 others(36): Show c.-495-51185_-495-51171dupAAAAAAAAAAAAAAA	LRRC4C	ENSG00000148948.8	transcript	ENST00000528697.6	protein_coding	1/6			chr11	TogoVar
LRRC4C_chr11_40109209_41464652	41011822	A A	ATATATTA others(8): Show ATATATTATATTATAT	intron_variant intron_variant	MODIFIER	HG01261.hp2 HG02055.hp2 HG02622.hp1 others(11): Show HG01261.hp2 HG02055.hp2 HG02622.hp1 HG02698.hp1 HG02698.hp2 HG02809.hp1 HG03225.hp2 HG03453.hp2 HG03540.hp1 HG03579.hp1 NA18906.hp2 NA18989.hp2 NA20129.hp1 NA20300.hp1	a0001 a0001	a0001c0001 a0001c0002 a0001c0001 a0001c0002	a0001c0001t0001 a0001c0002t0001 a0001c0002t0002 a0001c0001t0001 a0001c0002t0001 a0001c0002t0002	a0001c0001t0001g0006 a0001c0001t0001g0007 a0001c0001t0001g0025 others(11): Show a0001c0001t0001g0006 a0001c0001t0001g0007 a0001c0001t0001g0025 a0001c0001t0001g0028 a0001c0001t0001g0031 a0001c0001t0001g0035 a0001c0001t0001g0037 a0001c0001t0001g0038 a0001c0001t0001g0039 a0001c0001t0001g0042 a0001c0001t0001g0048 a0001c0002t0001g0011 a0001c0002t0002g0008 a0001c0002t0002g0012	14	48	0.2917	15	c.-49 others(36): Show c.-495-78114_-495-78100dupATATAATATAATATA	LRRC4C	ENSG00000148948.8	transcript	ENST00000528697.6	protein_coding	1/6			chr11	TogoVar
LRRC4C_chr11_40109209_41464652	41163284	G G	GTTTTTTT others(8): Show GTTTTTTTTTTTTTTT	intron_variant intron_variant	MODIFIER	HG01261.hp2 HG02055.hp2 HG03139.hp2 others(2): Show HG01261.hp2 HG02055.hp2 HG03139.hp2 HG03579.hp1 NA20300.hp2	a0001 a0001	a0001c0001 a0001c0002 a0001c0001 a0001c0002	a0001c0001t0001 a0001c0002t0001 a0001c0002t0002 a0001c0001t0001 a0001c0002t0001 a0001c0002t0002	a0001c0001t0001g0015 a0001c0001t0001g0038 a0001c0001t0001g0039 others(2): Show a0001c0001t0001g0015 a0001c0001t0001g0038 a0001c0001t0001g0039 a0001c0002t0001g0045 a0001c0002t0002g0008	5	48	0.1042	15	c.-49 others(38): Show c.-495-229576_-495-229562dupAAAAAAAAAAAAAAA	LRRC4C	ENSG00000148948.8	transcript	ENST00000528697.6	protein_coding	1/6			chr11	TogoVar
LRRC4C_chr11_40109209_41464652	41389639	C C	CAAAAAAA others(8): Show CAAAAAAAAAAAAAAA	intron_variant intron_variant	MODIFIER	HG01074.hp2 HG02622.hp1 HG02622.hp2 others(6): Show HG01074.hp2 HG02622.hp1 HG02622.hp2 HG02698.hp1 HG02717.hp2 HG02809.hp2 HG03225.hp1 HG03453.hp2 NA18989.hp2	a0001 a0001	a0001c0001 a0001c0002 a0001c0001 a0001c0002	a0001c0001t0001 a0001c0001t0002 a0001c0002t0001 a0001c0001t0001 a0001c0001t0002 a0001c0002t0001	a0001c0001t0001g0014 a0001c0001t0001g0035 a0001c0001t0001g0037 others(6): Show a0001c0001t0001g0014 a0001c0001t0001g0035 a0001c0001t0001g0037 a0001c0001t0001g0048 a0001c0001t0002g0036 a0001c0002t0001g0010 a0001c0002t0001g0011 a0001c0002t0001g0021 a0001c0002t0001g0024	9	48	0.1875	15	c.-49 others(36): Show c.-496+69791_-496+69792insTTTTTTTTTTTTTTT	LRRC4C	ENSG00000148948.8	transcript	ENST00000528697.6	protein_coding	1/6			chr11	TogoVar
LRRC4C_chr11_40109209_41464652	41408756	A A	AAAAAAAA others(8): Show AAAAAAAAAAACAAAC	intron_variant intron_variant	MODIFIER	HG02055.hp1 HG02055.hp1	a0001 a0001	a0001c0002 a0001c0002	a0001c0002t0001 a0001c0002t0001	a0001c0002t0001g0022 a0001c0002t0001g0022	1	48	0.0208	15	c.-49 others(36): Show c.-496+50674_-496+50675insGTTTGTTTTTTTTTT	LRRC4C	ENSG00000148948.8	transcript	ENST00000528697.6	protein_coding	1/6			chr11	TogoVar
LRRC52_chr1_165539000_165568957	165554426	G G	GGTTGTTG others(8): Show GGTTGTTGTTGTTGTT	intron_variant intron_variant	MODIFIER	HG00408.hp1 HG00738.hp1 HG01109.hp2 others(3): Show HG00408.hp1 HG00738.hp1 HG01109.hp2 HG01891.hp1 HG02647.hp2 HG03579.hp1	a0001 a0002 a0001 a0002	a0001c0002 a0002c0003 a0001c0002 a0002c0003	a0001c0002t0002 a0001c0002t0012 a0002c0003t0006 a0001c0002t0002 a0001c0002t0012 a0002c0003t0006	a0001c0002t0002g0024 a0001c0002t0002g0041 a0001c0002t0002g0070 others(2): Show a0001c0002t0002g0024 a0001c0002t0002g0041 a0001c0002t0002g0070 a0001c0002t0012g0041 a0002c0003t0006g0060	6	350	0.0171	15	c.623 others(32): Show c.623-9066_623-9052dupGTTGTTGTTGTTGTT	LRRC52	ENSG00000162763.4	transcript	ENST00000294818.2	protein_coding	1/1		INFO_REALIGN_3_PRIME	chr1	TogoVar
LRRC53_chr1_74464376_74517611	74486201	A A	AGAGAGAG others(8): Show AGAGAGAGAGAGAGAG	intron_variant intron_variant	MODIFIER	NA18944.hp2 NA18944.hp2	a0007 a0007	a0007c0007 a0007c0007	a0007c0007t0001 a0007c0007t0001	a0007c0007t0001g0124 a0007c0007t0001g0124	1	342	0.0029	15	c.-26 others(32): Show c.-26-2827_-26-2826insCTCTCTCTCTCTCTC	LRRC53	ENSG00000162621.7	transcript	ENST00000294635.5	protein_coding	1/4			chr1	TogoVar
LRRC53_chr1_74464376_74517611	74486506	G G	GTTTTTTG others(8): Show GTTTTTTGCTTTTTGC	intron_variant intron_variant	MODIFIER	HG03486.hp2 HG03486.hp2	a0016 a0016	a0016c0019 a0016c0019	a0016c0019t0001 a0016c0019t0001	a0016c0019t0001g0223 a0016c0019t0001g0223	1	342	0.0029	15	c.-26 others(32): Show c.-26-3132_-26-3131insGCAAAAAGCAAAAAA	LRRC53	ENSG00000162621.7	transcript	ENST00000294635.5	protein_coding	1/4			chr1	TogoVar
LRRC55_chr11_57176953_57196717	57178322	C C	CAGTTAAT others(8): Show CAGTTAATGTTAATAA	upstream_gene_variant upstream_gene_variant	MODIFIER	HG00099.hp1 HG00099.hp2 HG00140.hp2 others(341): Show HG00099.hp1 HG00099.hp2 HG00140.hp2 HG00280.hp1 HG00280.hp2 HG00323.hp2 HG00408.hp1 HG00408.hp2 HG00438.hp1 HG00438.hp2 HG00544.hp1 HG00558.hp1 HG00597.hp1 HG00609.hp1 HG00609.hp2 HG00621.hp2 HG00639.hp1 HG00642.hp1 HG00642.hp2 HG00673.hp1 HG00733.hp1 HG00733.hp2 HG00735.hp2 HG00738.hp1 HG00738.hp2 HG00741.hp1 HG01069.hp1 HG01070.hp1 HG01070.hp2 HG01071.hp1 HG01074.hp2 HG01081.hp1 HG01081.hp2 HG01099.hp1 HG01106.hp1 HG01106.hp2 HG01109.hp2 HG01123.hp1 HG01167.hp1 HG01168.hp1 HG01168.hp2 HG01169.hp1 HG01169.hp2 HG01175.hp1 HG01175.hp2 HG01192.hp1 HG01192.hp2 HG01243.hp1 HG01243.hp2 HG01255.hp1 HG01255.hp2 HG01256.hp1 HG01257.hp1 HG01257.hp2 HG01258.hp2 HG01261.hp1 HG01261.hp2 HG01346.hp2 HG01358.hp1 HG01358.hp2 HG01361.hp1 HG01361.hp2 HG01433.hp1 HG01433.hp2 HG01496.hp2 HG01515.hp1 HG01516.hp1 HG01516.hp2 HG01517.hp2 HG01884.hp1 HG01884.hp2 HG01891.hp1 HG01891.hp2 HG01934.hp1 HG01934.hp2 HG01943.hp2 HG01978.hp1 HG01978.hp2 HG01981.hp1 HG01981.hp2 HG01993.hp1 HG01993.hp2 HG02004.hp2 HG02015.hp1 HG02015.hp2 HG02055.hp1 HG02055.hp2 HG02071.hp1 HG02074.hp1 HG02074.hp2 HG02109.hp1 HG02109.hp2 HG02132.hp2 HG02135.hp1 HG02135.hp2 HG02145.hp2 HG02148.hp1 HG02148.hp2 HG02155.hp2 HG02165.hp1 HG02165.hp2 HG02257.hp1 HG02257.hp2 HG02258.hp1 HG02258.hp2 HG02273.hp1 HG02273.hp2 HG02280.hp1 HG02293.hp1 HG02293.hp2 HG02451.hp1 HG02451.hp2 HG02486.hp1 HG02486.hp2 HG02523.hp1 HG02523.hp2 HG02559.hp1 HG02559.hp2 HG02572.hp1 HG02572.hp2 HG02602.hp2 HG02615.hp1 HG02615.hp2 HG02622.hp1 HG02622.hp2 HG02630.hp1 HG02630.hp2 HG02647.hp1 HG02647.hp2 HG02683.hp1 HG02683.hp2 HG02698.hp1 HG02698.hp2 HG02717.hp1 HG02717.hp2 HG02723.hp1 HG02723.hp2 HG02735.hp1 HG02735.hp2 HG02738.hp1 HG02738.hp2 HG02809.hp1 HG02809.hp2 HG02818.hp1 HG02818.hp2 HG02886.hp1 HG02886.hp2 HG02895.hp1 HG02896.hp1 HG02896.hp2 HG02897.hp1 HG02897.hp2 HG02922.hp1 HG02922.hp2 HG02965.hp1 HG02965.hp2 HG02970.hp1 HG02970.hp2 HG02976.hp1 HG02976.hp2 HG03017.hp2 HG03041.hp1 HG03041.hp2 HG03098.hp1 HG03098.hp2 HG03130.hp1 HG03130.hp2 HG03209.hp2 HG03225.hp1 HG03225.hp2 HG03239.hp1 HG03239.hp2 HG03453.hp1 HG03471.hp1 HG03471.hp2 HG03486.hp1 HG03486.hp2 HG03491.hp1 HG03491.hp2 HG03492.hp1 HG03540.hp1 HG03579.hp1 HG03579.hp2 HG03669.hp2 HG03688.hp1 HG03688.hp2 HG03704.hp1 HG03704.hp2 HG03710.hp1 HG03710.hp2 HG03831.hp1 HG03831.hp2 HG03834.hp1 HG03834.hp2 HG03927.hp1 HG03927.hp2 HG03942.hp1 HG03942.hp2 HG04115.hp2 HG04199.hp1 HG04204.hp1 HG04204.hp2 HG04228.hp1 HG04228.hp2 HG06807.hp1 NA18522.hp1 NA18522.hp2 NA18747.hp1 NA18747.hp2 NA18906.hp1 NA18906.hp2 NA18939.hp1 NA18939.hp2 NA18941.hp2 NA18942.hp1 NA18942.hp2 NA18943.hp1 NA18943.hp2 NA18945.hp1 NA18945.hp2 NA18948.hp1 NA18950.hp2 NA18951.hp2 NA18952.hp1 NA18953.hp1 NA18953.hp2 NA18954.hp1 NA18954.hp2 NA18955.hp1 NA18956.hp1 NA18957.hp1 NA18957.hp2 NA18960.hp1 NA18960.hp2 NA18962.hp1 NA18963.hp1 NA18963.hp2 NA18965.hp1 NA18965.hp2 NA18966.hp2 NA18967.hp1 NA18967.hp2 NA18968.hp1 NA18968.hp2 NA18969.hp1 NA18969.hp2 NA18970.hp1 NA18970.hp2 NA18972.hp1 NA18972.hp2 NA18974.hp1 NA18974.hp2 NA18979.hp1 NA18979.hp2 NA18981.hp1 NA18981.hp2 NA18982.hp1 NA18982.hp2 NA18983.hp1 NA18983.hp2 NA18984.hp1 NA18984.hp2 NA18985.hp1 NA18986.hp1 NA18986.hp2 NA18987.hp1 NA18987.hp2 NA18988.hp2 NA18992.hp1 NA18993.hp1 NA18993.hp2 NA18994.hp1 NA18994.hp2 NA18995.hp1 NA18995.hp2 NA18998.hp1 NA18999.hp2 NA19000.hp1 NA19000.hp2 NA19002.hp2 NA19003.hp1 NA19003.hp2 NA19004.hp1 NA19004.hp2 NA19005.hp1 NA19005.hp2 NA19007.hp1 NA19009.hp1 NA19010.hp1 NA19010.hp2 NA19011.hp1 NA19011.hp2 NA19043.hp1 NA19043.hp2 NA19054.hp1 NA19054.hp2 NA19055.hp1 NA19056.hp1 NA19056.hp2 NA19057.hp1 NA19057.hp2 NA19058.hp2 NA19059.hp1 NA19059.hp2 NA19062.hp2 NA19063.hp1 NA19063.hp2 NA19064.hp1 NA19064.hp2 NA19065.hp1 NA19066.hp1 NA19068.hp2 NA19070.hp1 NA19070.hp2 NA19072.hp1 NA19072.hp2 NA19075.hp1 NA19075.hp2 NA19077.hp2 NA19079.hp1 NA19079.hp2 NA19080.hp1 NA19080.hp2 NA19081.hp2 NA19082.hp1 NA19082.hp2 NA19083.hp2 NA19084.hp1 NA19085.hp1 NA19085.hp2 NA19086.hp2 NA19087.hp2 NA19088.hp1 NA19090.hp2 NA19240.hp1 NA19240.hp2 NA20129.hp2 NA20300.hp1 NA20300.hp2 NA20752.hp1 NA20805.hp2 NA20905.hp2 NA21309.hp1 homoSapiens_chm13v2.hp1	a0001 a0002 a0003 others(1): Show a0001 a0002 a0003 a0004	a0001c0001 a0001c0002 a0001c0004 others(10): Show a0001c0001 a0001c0002 a0001c0004 a0001c0005 a0001c0007 a0001c0008 a0001c0009 a0001c0010 a0001c0011 a0001c0012 a0002c0003 a0003c0013 a0004c0006	a0001c0001t0001 a0001c0001t0004 a0001c0001t0005 others(42): Show a0001c0001t0001 a0001c0001t0004 a0001c0001t0005 a0001c0001t0006 a0001c0001t0007 a0001c0001t0008 a0001c0001t0009 a0001c0001t0010 a0001c0001t0011 a0001c0001t0013 a0001c0001t0014 a0001c0001t0016 a0001c0001t0017 a0001c0001t0018 a0001c0001t0021 a0001c0001t0023 a0001c0001t0024 a0001c0001t0026 a0001c0001t0027 a0001c0001t0028 a0001c0001t0029 a0001c0001t0030 a0001c0001t0036 a0001c0001t0038 a0001c0001t0039 a0001c0001t0040 a0001c0001t0041 a0001c0002t0002 a0001c0002t0012 a0001c0002t0015 a0001c0002t0020 a0001c0002t0022 a0001c0002t0032 a0001c0004t0004 a0001c0005t0019 a0001c0007t0017 a0001c0008t0034 a0001c0009t0009 a0001c0010t0002 a0001c0011t0031 a0001c0012t0037 a0002c0003t0002 a0002c0003t0033 a0003c0013t0001 a0004c0006t0001	a0001c0001t0001g0001 a0001c0001t0001g0006 a0001c0001t0001g0013 others(80): Show a0001c0001t0001g0001 a0001c0001t0001g0006 a0001c0001t0001g0013 a0001c0001t0001g0036 a0001c0001t0001g0040 a0001c0001t0001g0041 a0001c0001t0001g0042 a0001c0001t0001g0043 a0001c0001t0001g0044 a0001c0001t0001g0045 a0001c0001t0001g0046 a0001c0001t0001g0050 a0001c0001t0001g0051 a0001c0001t0001g0052 a0001c0001t0004g0005 a0001c0001t0005g0005 a0001c0001t0005g0027 a0001c0001t0006g0011 a0001c0001t0006g0048 a0001c0001t0006g0049 a0001c0001t0007g0015 a0001c0001t0007g0023 a0001c0001t0007g0038 a0001c0001t0007g0039 a0001c0001t0007g0053 a0001c0001t0008g0014 a0001c0001t0008g0017 a0001c0001t0008g0047 a0001c0001t0009g0025 a0001c0001t0009g0056 a0001c0001t0009g0057 a0001c0001t0009g0058 a0001c0001t0010g0001 a0001c0001t0010g0006 a0001c0001t0011g0016 a0001c0001t0013g0018 a0001c0001t0014g0028 a0001c0001t0014g0055 a0001c0001t0016g0001 a0001c0001t0017g0001 a0001c0001t0018g0001 a0001c0001t0018g0013 a0001c0001t0021g0019 a0001c0001t0023g0001 a0001c0001t0024g0001 a0001c0001t0026g0037 a0001c0001t0027g0023 a0001c0001t0028g0001 a0001c0001t0029g0001 a0001c0001t0030g0001 a0001c0001t0036g0005 a0001c0001t0038g0001 a0001c0001t0039g0027 a0001c0001t0040g0014 a0001c0001t0041g0019 a0001c0002t0002g0001 a0001c0002t0002g0003 a0001c0002t0002g0010 a0001c0002t0002g0012 a0001c0002t0002g0021 a0001c0002t0002g0026 a0001c0002t0002g0032 a0001c0002t0002g0033 a0001c0002t0002g0034 a0001c0002t0012g0017 a0001c0002t0015g0024 a0001c0002t0020g0003 a0001c0002t0022g0003 a0001c0002t0032g0003 a0001c0004t0004g0007 a0001c0005t0019g0003 a0001c0007t0017g0001 a0001c0008t0034g0003 a0001c0009t0009g0019 a0001c0010t0002g0003 a0001c0011t0031g0059 a0001c0012t0037g0054 a0002c0003t0002g0004 a0002c0003t0002g0022 a0002c0003t0002g0035 a0002c0003t0033g0004 a0003c0013t0001g0006 a0004c0006t0001g0001	344	432	0.7963	15	c.-37 others(26): Show c.-3701_-3700insAGTTAATGTTAATAA	LRRC55	ENSG00000183908.7	transcript	ENST00000497933.3	protein_coding		3630		chr11	TogoVar
LRRC56_chr11_532527_559912	542580	C C	CAAAAAAA others(8): Show CAAAAAAAAAAAAAAA	intron_variant intron_variant	MODIFIER	HG02486.hp2 HG02572.hp2 HG02723.hp2 others(1): Show HG02486.hp2 HG02572.hp2 HG02723.hp2 HG03130.hp2	a0002 a0003 a0002 a0003	a0002c0002 a0003c0003 a0002c0002 a0003c0003	a0002c0002t0003 a0003c0003t0006 a0002c0002t0003 a0003c0003t0006	a0002c0002t0003g0077 a0002c0002t0003g0091 a0002c0002t0003g0094 others(1): Show a0002c0002t0003g0077 a0002c0002t0003g0091 a0002c0002t0003g0094 a0003c0003t0006g0100	4	387	0.0103	15	c.265 others(30): Show c.265+966_265+980dupAAAAAAAAAAAAAAA	LRRC56	ENSG00000161328.11	transcript	ENST00000270115.8	protein_coding	5/13		INFO_REALIGN_3_PRIME	chr11	TogoVar
LRRC56_chr11_532527_559912	555162	G G	GGGAGGGG others(8): Show GGGAGGGGAGCGGCGA	downstream_gene_variant downstream_gene_variant	MODIFIER	HG00733.hp2 HG01081.hp1 HG01106.hp1 others(2): Show HG00733.hp2 HG01081.hp1 HG01106.hp1 HG01515.hp1 HG01993.hp2	a0007 a0007	a0007c0009 a0007c0009	a0007c0009t0012 a0007c0009t0012	a0007c0009t0012g0008 a0007c0009t0012g0131 a0007c0009t0012g0008 a0007c0009t0012g0131	5	387	0.0129	15	c.88 others(24): Show c.886_*887insGGAGGGGAGCGGCGA	LRRC56	ENSG00000161328.11	transcript	ENST00000270115.8	protein_coding		251		chr11	TogoVar
LRRC56_chr11_532527_559912	555170	A A	AGGAGAGG others(8): Show AGGAGAGGGGAGGGGC	downstream_gene_variant downstream_gene_variant	MODIFIER	NA19240.hp1 NA19240.hp1	a0003 a0003	a0003c0003 a0003c0003	a0003c0003t0011 a0003c0003t0011	a0003c0003t0011g0261 a0003c0003t0011g0261	1	387	0.0026	15	c.89 others(24): Show c.894_*895insGGAGAGGGGAGGGGC	LRRC56	ENSG00000161328.11	transcript	ENST00000270115.8	protein_coding		259		chr11	TogoVar
LRRC57_chr15_42532829_42553793	42544836	C C	CTATATAT others(8): Show CTATATATATATATAT	intron_variant intron_variant	MODIFIER	HG03195.hp1 HG03195.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0007 a0001c0001t0007	a0001c0001t0007g0155 a0001c0001t0007g0155	1	356	0.0028	15	c.678 others(30): Show c.678+240_678+241insATATATATATATATA	LRRC57	ENSG00000180979.10	transcript	ENST00000397130.8	protein_coding	5/5			chr15	TogoVar
LRRC58_chr3_120319509_120354354	120347379	C C	CTTTTTTT others(8): Show CTTTTTTTTTTTTTTT	intron_variant intron_variant	MODIFIER	HG00558.hp2 HG00621.hp2 HG01358.hp2 others(38): Show HG00558.hp2 HG00621.hp2 HG01358.hp2 HG02055.hp2 HG02132.hp1 HG02155.hp1 HG02300.hp1 HG02300.hp2 HG02602.hp1 HG02615.hp1 HG02886.hp1 HG02976.hp1 HG03209.hp1 HG03492.hp2 HG03710.hp1 HG04115.hp1 HG04228.hp1 NA18942.hp1 NA18942.hp2 NA18950.hp1 NA18951.hp1 NA18954.hp1 NA18954.hp2 NA18963.hp1 NA18975.hp1 NA18982.hp1 NA18982.hp2 NA18985.hp1 NA18988.hp2 NA18989.hp2 NA18991.hp2 NA19005.hp1 NA19005.hp2 NA19012.hp1 NA19058.hp1 NA19062.hp2 NA19066.hp1 NA19066.hp2 NA19077.hp1 NA19240.hp1 NA20805.hp2	a0001 a0003 a0001 a0003	a0001c0001 a0003c0009 a0001c0001 a0003c0009	a0001c0001t0001 a0001c0001t0009 a0001c0001t0011 others(6): Show a0001c0001t0001 a0001c0001t0009 a0001c0001t0011 a0001c0001t0015 a0001c0001t0046 a0001c0001t0049 a0001c0001t0051 a0001c0001t0058 a0003c0009t0035	a0001c0001t0001g0002 a0001c0001t0001g0008 a0001c0001t0001g0023 others(16): Show a0001c0001t0001g0002 a0001c0001t0001g0008 a0001c0001t0001g0023 a0001c0001t0001g0045 a0001c0001t0001g0046 a0001c0001t0001g0047 a0001c0001t0001g0048 a0001c0001t0001g0049 a0001c0001t0001g0105 a0001c0001t0001g0129 a0001c0001t0009g0121 a0001c0001t0009g0128 a0001c0001t0011g0123 a0001c0001t0015g0126 a0001c0001t0046g0122 a0001c0001t0049g0124 a0001c0001t0051g0125 a0001c0001t0058g0127 a0003c0009t0035g0103	41	376	0.1090	15	c.500 others(32): Show c.500+1350_500+1364dupAAAAAAAAAAAAAAA	LRRC58	ENSG00000163428.4	transcript	ENST00000295628.4	protein_coding	1/3			chr3	TogoVar
LRRC63_chr13_46206928_46282115	46221676	C C	CATATGGA others(8): Show CATATGGATCAAAGTT	intron_variant intron_variant	MODIFIER	NA19067.hp1 NA19067.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0004 a0001c0001t0004	a0001c0001t0004g0046 a0001c0001t0004g0046	1	386	0.0026	15	c.86- others(30): Show c.86-5835_86-5821dupATATGGATCAAAGTT	LRRC63	ENSG00000173988.14	transcript	ENST00000595396.3	protein_coding	2/9		INFO_REALIGN_3_PRIME	chr13	TogoVar
LRRC63_chr13_46206928_46282115	46276854	A A	ATATATAT others(8): Show ATATATATATATATAT	3_prime_UTR_variant 3_prime_UTR_variant	MODIFIER	HG00423.hp2 NA18966.hp1 HG00423.hp2 NA18966.hp1	a0001 a0008 a0001 a0008	a0001c0001 a0008c0008 a0001c0001 a0008c0008	a0001c0001t0036 a0008c0008t0047 a0001c0001t0036 a0008c0008t0047	a0001c0001t0036g0021 a0008c0008t0047g0036 a0001c0001t0036g0021 a0008c0008t0047g0036	2	386	0.0052	15	c.64 others(22): Show c.64_*65insATTATATATATATAT	LRRC63	ENSG00000173988.14	transcript	ENST00000595396.3	protein_coding	10/10	65	INFO_REALIGN_3_PRIME	chr13	TogoVar
LRRC66_chr4_51988652_52025363	52019677	T T	TTTTTAGG others(8): Show TTTTTAGGTGATTTTA	intron_variant intron_variant	MODIFIER	NA18993.hp1 NA18993.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0080 a0001c0001t0001g0080	1	336	0.0030	15	c.-6+ others(28): Show c.-6+626_-6+627insTAAAATCACCTAAAA	LRRC66	ENSG00000188993.4	transcript	ENST00000682860.1	protein_coding	1/4			chr4	TogoVar
LRRC69_chr8_91097619_91224257	91176134	A A	ATATATAT others(8): Show ATATATATATATATTT	intron_variant intron_variant	MODIFIER	HG04184.hp1 HG04184.hp1	a0002 a0002	a0002c0002 a0002c0002	a0002c0002t0001 a0002c0002t0001	a0002c0002t0001g0088 a0002c0002t0001g0088	1	318	0.0031	15	c.652 others(34): Show c.652-13387_652-13386insATATATATATATTTT	LRRC69	ENSG00000214954.9	transcript	ENST00000448384.3	protein_coding	5/7		INFO_REALIGN_3_PRIME	chr8	TogoVar
LRRC69_chr8_91097619_91224257	91176134	A A	ATATATAT others(8): Show ATATATATATTTTTTT	intron_variant intron_variant	MODIFIER	HG02109.hp1 HG02559.hp1 HG02896.hp2 others(5): Show HG02109.hp1 HG02559.hp1 HG02896.hp2 HG03041.hp1 HG03209.hp1 HG03225.hp1 HG03486.hp2 NA19072.hp2	a0001 a0002 a0001 a0002	a0001c0001 a0002c0002 a0001c0001 a0002c0002	a0001c0001t0002 a0002c0002t0001 a0001c0001t0002 a0002c0002t0001	a0001c0001t0002g0157 a0001c0001t0002g0158 a0001c0001t0002g0159 others(5): Show a0001c0001t0002g0157 a0001c0001t0002g0158 a0001c0001t0002g0159 a0001c0001t0002g0160 a0001c0001t0002g0161 a0001c0001t0002g0181 a0001c0001t0002g0187 a0002c0002t0001g0142	8	318	0.0252	15	c.652 others(34): Show c.652-13387_652-13386insATATATATTTTTTTT	LRRC69	ENSG00000214954.9	transcript	ENST00000448384.3	protein_coding	5/7		INFO_REALIGN_3_PRIME	chr8	TogoVar
LRRC69_chr8_91097619_91224257	91176134	A A	ATATATAT others(8): Show ATATATATTTTTTTTT	intron_variant intron_variant	MODIFIER	HG00558.hp1 HG02145.hp2 NA18947.hp1 others(2): Show HG00558.hp1 HG02145.hp2 NA18947.hp1 NA18979.hp1 NA18999.hp2	a0001 a0002 a0001 a0002	a0001c0001 a0002c0002 a0001c0001 a0002c0002	a0001c0001t0001 a0002c0002t0001 a0001c0001t0001 a0002c0002t0001	a0001c0001t0001g0059 a0002c0002t0001g0071 a0002c0002t0001g0073 others(2): Show a0001c0001t0001g0059 a0002c0002t0001g0071 a0002c0002t0001g0073 a0002c0002t0001g0130 a0002c0002t0001g0310	5	318	0.0157	15	c.652 others(34): Show c.652-13387_652-13386insATATATTTTTTTTTT	LRRC69	ENSG00000214954.9	transcript	ENST00000448384.3	protein_coding	5/7		INFO_REALIGN_3_PRIME	chr8	TogoVar
LRRC69_chr8_91097619_91224257	91176134	A A	ATATATTT others(8): Show ATATATTTTTTTTTTT	intron_variant intron_variant	MODIFIER	HG01106.hp1 HG01361.hp2 HG02976.hp1 others(4): Show HG01106.hp1 HG01361.hp2 HG02976.hp1 HG03041.hp2 HG03139.hp2 HG03540.hp1 NA21309.hp2	a0001 a0002 a0001 a0002	a0001c0001 a0002c0002 a0001c0001 a0002c0002	a0001c0001t0001 a0001c0001t0003 a0002c0002t0001 a0001c0001t0001 a0001c0001t0003 a0002c0002t0001	a0001c0001t0001g0164 a0001c0001t0001g0170 a0001c0001t0001g0173 others(4): Show a0001c0001t0001g0164 a0001c0001t0001g0170 a0001c0001t0001g0173 a0001c0001t0003g0179 a0001c0001t0003g0180 a0002c0002t0001g0067 a0002c0002t0001g0072	7	318	0.0220	15	c.652 others(34): Show c.652-13387_652-13386insATATTTTTTTTTTTT	LRRC69	ENSG00000214954.9	transcript	ENST00000448384.3	protein_coding	5/7		INFO_REALIGN_3_PRIME	chr8	TogoVar
LRRC71_chr1_156915632_156938094	156928351	C C	CTCTTCTT others(8): Show CTCTTCTTCTTCTTCT	intron_variant intron_variant	MODIFIER	HG03195.hp1 HG03516.hp2 HG03195.hp1 HG03516.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0022 a0001c0001t0001g0022	2	402	0.0050	15	c.996 others(30): Show c.996+358_996+359insTTCTTCTTCTTCTTC	LRRC71	ENSG00000160838.14	transcript	ENST00000337428.8	protein_coding	9/14		INFO_REALIGN_3_PRIME	chr1	TogoVar
LRRC71_chr1_156915632_156938094	156928363	C C	CTCCTCTT others(8): Show CTCCTCTTCTTCTTCT	intron_variant intron_variant	MODIFIER	HG03704.hp1 HG03704.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0066 a0001c0001t0001g0066	1	402	0.0025	15	c.996 others(30): Show c.996+361_996+362insCTCTTCTTCTTCTTC	LRRC71	ENSG00000160838.14	transcript	ENST00000337428.8	protein_coding	9/14		INFO_REALIGN_3_PRIME	chr1	TogoVar
LRRC71_chr1_156915632_156938094	156928363	C C	CTCTTCTT others(8): Show CTCTTCTTCTTCTTCT	intron_variant intron_variant	MODIFIER	HG00438.hp2 HG01361.hp1 HG01928.hp1 others(6): Show HG00438.hp2 HG01361.hp1 HG01928.hp1 HG01952.hp2 HG02273.hp1 HG04228.hp2 NA19007.hp1 NA19010.hp1 NA20905.hp1	a0001 a0002 a0003 a0001 a0002 a0003	a0001c0001 a0002c0002 a0003c0004 a0001c0001 a0002c0002 a0003c0004	a0001c0001t0001 a0002c0002t0001 a0003c0004t0001 a0001c0001t0001 a0002c0002t0001 a0003c0004t0001	a0001c0001t0001g0016 a0001c0001t0001g0091 a0001c0001t0001g0191 others(4): Show a0001c0001t0001g0016 a0001c0001t0001g0091 a0001c0001t0001g0191 a0001c0001t0001g0260 a0002c0002t0001g0200 a0003c0004t0001g0016 a0003c0004t0001g0056	9	402	0.0224	15	c.996 others(30): Show c.996+389_996+403dupTTCTTCTTCTTCTTC	LRRC71	ENSG00000160838.14	transcript	ENST00000337428.8	protein_coding	9/14		INFO_REALIGN_3_PRIME	chr1	TogoVar
LRRC74A_chr14_76821408_76875304	76853430	G G	GTGTGTGT others(8): Show GTGTGTGTGTGTGTGT	intron_variant intron_variant	MODIFIER	NA18949.hp1 NA18949.hp1	a0001 a0001	a0001c0004 a0001c0004	a0001c0004t0001 a0001c0004t0001	a0001c0004t0001g0161 a0001c0004t0001g0161	1	408	0.0025	15	c.957 others(28): Show c.957+20_957+21insTGTGTGTGTGTGTGT	LRRC74A	ENSG00000100565.16	transcript	ENST00000689127.1	protein_coding	9/13			chr14	TogoVar
LRRC7_chr1_69562922_70149364	69650539	C C	CAAAAAAA others(8): Show CAAAAAAAAAAAAAAA	intron_variant intron_variant	MODIFIER	HG01192.hp2 HG02145.hp2 HG02976.hp2 HG01192.hp2 HG02145.hp2 HG02976.hp2	a0001 a0006 a0001 a0006	a0001c0001 a0006c0014 a0001c0001 a0006c0014	a0001c0001t0019 a0001c0001t0077 a0006c0014t0062 a0001c0001t0019 a0001c0001t0077 a0006c0014t0062	a0001c0001t0019g0038 a0001c0001t0077g0055 a0006c0014t0062g0096 a0001c0001t0019g0038 a0001c0001t0077g0055 a0006c0014t0062g0096	3	108	0.0278	15	c.3-2 others(30): Show c.3-27841_3-27827dupAAAAAAAAAAAAAAA	LRRC7	ENSG00000033122.21	transcript	ENST00000651989.2	protein_coding	1/26		INFO_REALIGN_3_PRIME	chr1	TogoVar
LRRC7_chr1_69562922_70149364	69750090	A A	AAATAAAT others(8): Show AAATAAATAAATAAAT	intron_variant intron_variant	MODIFIER	NA19080.hp1 NA19080.hp2 NA19080.hp1 NA19080.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0041 a0001c0001t0042 a0001c0001t0041 a0001c0001t0042	a0001c0001t0041g0002 a0001c0001t0042g0106 a0001c0001t0041g0002 a0001c0001t0042g0106	2	108	0.0185	15	c.101 others(34): Show c.101-10096_101-10095insATAAATAAATAATAA	LRRC7	ENSG00000033122.21	transcript	ENST00000651989.2	protein_coding	2/26		INFO_REALIGN_3_PRIME	chr1	TogoVar
LRRC7_chr1_69562922_70149364	69879212	T T	TAAAAAAA others(8): Show TAAAAAAAAAAAAAAA	intron_variant intron_variant	MODIFIER	HG02976.hp2 HG02976.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0019 a0001c0001t0019	a0001c0001t0019g0038 a0001c0001t0019g0038	1	108	0.0093	15	c.647 others(34): Show c.647+40939_647+40953dupAAAAAAAAAAAAAAA	LRRC7	ENSG00000033122.21	transcript	ENST00000651989.2	protein_coding	7/26		INFO_REALIGN_3_PRIME	chr1	TogoVar
LRRC7_chr1_69562922_70149364	69889724	T T	TCAGGAGG others(8): Show TCAGGAGGCTGAGGTG	intron_variant intron_variant	MODIFIER	HG01192.hp2 HG02630.hp2 HG02970.hp1 others(2): Show HG01192.hp2 HG02630.hp2 HG02970.hp1 HG03225.hp1 NA20300.hp1	a0001 a0001	a0001c0001 a0001c0017 a0001c0001 a0001c0017	a0001c0001t0001 a0001c0001t0011 a0001c0001t0056 others(2): Show a0001c0001t0001 a0001c0001t0011 a0001c0001t0056 a0001c0001t0077 a0001c0017t0052	a0001c0001t0001g0099 a0001c0001t0011g0042 a0001c0001t0056g0100 others(2): Show a0001c0001t0001g0099 a0001c0001t0011g0042 a0001c0001t0056g0100 a0001c0001t0077g0055 a0001c0017t0052g0017	5	108	0.0463	15	c.648 others(34): Show c.648-41783_648-41782insCAGGAGGCTGAGGTG	LRRC7	ENSG00000033122.21	transcript	ENST00000651989.2	protein_coding	7/26			chr1	TogoVar
LRRC7_chr1_69562922_70149364	70082781	A A	ATCTTTTT others(8): Show ATCTTTTTTTTTTTTT	intron_variant intron_variant	MODIFIER	HG00621.hp1 HG01192.hp1 HG01496.hp1 others(1): Show HG00621.hp1 HG01192.hp1 HG01496.hp1 NA18954.hp1	a0001 a0004 a0001 a0004	a0001c0001 a0004c0012 a0001c0001 a0004c0012	a0001c0001t0039 a0001c0001t0082 a0001c0001t0085 others(1): Show a0001c0001t0039 a0001c0001t0082 a0001c0001t0085 a0004c0012t0004	a0001c0001t0039g0098 a0001c0001t0082g0050 a0001c0001t0085g0089 others(1): Show a0001c0001t0039g0098 a0001c0001t0082g0050 a0001c0001t0085g0089 a0004c0012t0004g0007	4	108	0.0370	15	c.445 others(34): Show c.4452+6484_4452+6485insCTTTTTTTTTTTTTT	LRRC7	ENSG00000033122.21	transcript	ENST00000651989.2	protein_coding	24/26		INFO_REALIGN_3_PRIME	chr1	TogoVar
LRRC7_chr1_69562922_70149364	70119649	C C	CTTAACAC others(8): Show CTTAACACTGATATTT	intron_variant intron_variant	MODIFIER	HG01192.hp1 HG01496.hp1 HG01884.hp1 others(16): Show HG01192.hp1 HG01496.hp1 HG01884.hp1 HG02055.hp1 HG02129.hp1 HG02129.hp2 HG02145.hp2 HG02486.hp1 HG02572.hp2 HG02735.hp1 HG02895.hp1 HG02922.hp1 HG02922.hp2 HG03195.hp1 HG04115.hp1 HG04184.hp2 NA18977.hp2 NA19004.hp2 NA20905.hp2	a0001 a0004 a0006 others(1): Show a0001 a0004 a0006 a0008	a0001c0001 a0001c0002 a0001c0008 others(3): Show a0001c0001 a0001c0002 a0001c0008 a0004c0012 a0006c0014 a0008c0016	a0001c0001t0003 a0001c0001t0004 a0001c0001t0021 others(15): Show a0001c0001t0003 a0001c0001t0004 a0001c0001t0021 a0001c0001t0022 a0001c0001t0023 a0001c0001t0025 a0001c0001t0026 a0001c0001t0027 a0001c0001t0063 a0001c0001t0064 a0001c0001t0067 a0001c0001t0068 a0001c0001t0085 a0001c0002t0080 a0001c0008t0024 a0004c0012t0004 a0006c0014t0062 a0008c0016t0065	a0001c0001t0003g0022 a0001c0001t0003g0041 a0001c0001t0004g0010 others(16): Show a0001c0001t0003g0022 a0001c0001t0003g0041 a0001c0001t0004g0010 a0001c0001t0021g0003 a0001c0001t0022g0088 a0001c0001t0023g0036 a0001c0001t0025g0011 a0001c0001t0026g0029 a0001c0001t0027g0040 a0001c0001t0063g0057 a0001c0001t0064g0026 a0001c0001t0067g0075 a0001c0001t0068g0069 a0001c0001t0085g0089 a0001c0002t0080g0046 a0001c0008t0024g0107 a0004c0012t0004g0007 a0006c0014t0062g0096 a0008c0016t0065g0052	19	108	0.1759	15	c.462 others(34): Show c.4621-2124_4621-2110dupCTGATATTTTTAACA	LRRC7	ENSG00000033122.21	transcript	ENST00000651989.2	protein_coding	26/26		INFO_REALIGN_3_PRIME	chr1	TogoVar
LRRC8A_chr9_128877133_128923039	128890130	T T	TGTGTGTG others(8): Show TGTGTGTGTGTGTGTG	intron_variant intron_variant	MODIFIER	HG00642.hp1 HG01106.hp1 HG00642.hp1 HG01106.hp1	a0001 a0001	a0001c0001 a0001c0002 a0001c0001 a0001c0002	a0001c0001t0002 a0001c0002t0001 a0001c0001t0002 a0001c0002t0001	a0001c0001t0002g0173 a0001c0002t0001g0155 a0001c0001t0002g0173 a0001c0002t0001g0155	2	344	0.0058	15	c.-9+ others(30): Show c.-9+4009_-9+4010insGTGTGTGTGTGTGTG	LRRC8A	ENSG00000136802.12	transcript	ENST00000372600.9	protein_coding	2/3			chr9	TogoVar
LRRC8B_chr1_89519829_89602861	89541710	C C	CAAAAAAA others(8): Show CAAAAAAAAAAAAAAA	intron_variant intron_variant	MODIFIER	HG02622.hp2 NA18906.hp2 HG02622.hp2 NA18906.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0007 a0001c0001t0010 a0001c0001t0007 a0001c0001t0010	a0001c0001t0007g0083 a0001c0001t0010g0077 a0001c0001t0007g0083 a0001c0001t0010g0077	2	324	0.0062	15	c.-24 others(36): Show c.-241+16713_-241+16727dupAAAAAAAAAAAAAAA	LRRC8B	ENSG00000197147.15	transcript	ENST00000330947.7	protein_coding	1/5		INFO_REALIGN_3_PRIME	chr1	TogoVar
LRRC8B_chr1_89519829_89602861	89562182	C C	CACACACA others(8): Show CACACACACACACACA	intron_variant intron_variant	MODIFIER	NA18967.hp1 NA18967.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0004 a0001c0001t0004	a0001c0001t0004g0162 a0001c0001t0004g0162	1	324	0.0031	15	c.-24 others(34): Show c.-240-6065_-240-6064insACACACACACACACA	LRRC8B	ENSG00000197147.15	transcript	ENST00000330947.7	protein_coding	1/5			chr1	TogoVar
LRRC8C_chr1_89628120_89724533	89638967	A A	ATTATTTT others(8): Show ATTATTTTATTTTATT	intron_variant intron_variant	MODIFIER	HG00673.hp1 HG00733.hp2 HG00738.hp1 others(53): Show HG00673.hp1 HG00733.hp2 HG00738.hp1 HG00738.hp2 HG01071.hp1 HG01071.hp2 HG01167.hp2 HG01168.hp1 HG01169.hp2 HG01192.hp1 HG01346.hp2 HG01361.hp2 HG01515.hp2 HG01884.hp1 HG01981.hp1 HG01993.hp2 HG02004.hp2 HG02071.hp1 HG02071.hp2 HG02257.hp1 HG02615.hp1 HG02622.hp2 HG02630.hp1 HG02723.hp1 HG02735.hp1 HG02895.hp1 HG02897.hp2 HG03041.hp1 HG03041.hp2 HG03195.hp1 HG03225.hp1 HG03491.hp2 HG03540.hp1 HG03688.hp1 HG03927.hp2 HG04204.hp2 NA18522.hp2 NA18747.hp2 NA18939.hp1 NA18950.hp2 NA18956.hp2 NA18962.hp2 NA18964.hp2 NA18971.hp1 NA18978.hp1 NA18979.hp1 NA18984.hp2 NA18988.hp1 NA18999.hp1 NA19011.hp1 NA19056.hp1 NA19070.hp2 NA20300.hp2 NA20752.hp2 NA20905.hp1 NA21309.hp1	a0001 a0002 a0007 a0001 a0002 a0007	a0001c0001 a0001c0003 a0002c0002 others(1): Show a0001c0001 a0001c0003 a0002c0002 a0007c0010	a0001c0001t0001 a0001c0001t0002 a0001c0001t0003 others(7): Show a0001c0001t0001 a0001c0001t0002 a0001c0001t0003 a0001c0001t0007 a0001c0001t0019 a0001c0001t0023 a0001c0001t0030 a0001c0003t0021 a0002c0002t0003 a0007c0010t0001	a0001c0001t0001g0024 a0001c0001t0001g0142 a0001c0001t0001g0143 others(52): Show a0001c0001t0001g0024 a0001c0001t0001g0142 a0001c0001t0001g0143 a0001c0001t0001g0144 a0001c0001t0001g0145 a0001c0001t0001g0146 a0001c0001t0001g0149 a0001c0001t0001g0151 a0001c0001t0001g0152 a0001c0001t0001g0154 a0001c0001t0001g0155 a0001c0001t0001g0158 a0001c0001t0001g0160 a0001c0001t0001g0161 a0001c0001t0001g0162 a0001c0001t0001g0163 a0001c0001t0001g0164 a0001c0001t0001g0165 a0001c0001t0001g0166 a0001c0001t0001g0167 a0001c0001t0001g0168 a0001c0001t0001g0169 a0001c0001t0001g0170 a0001c0001t0001g0171 a0001c0001t0001g0173 a0001c0001t0001g0174 a0001c0001t0001g0175 a0001c0001t0001g0176 a0001c0001t0001g0177 a0001c0001t0001g0178 a0001c0001t0001g0179 a0001c0001t0001g0180 a0001c0001t0001g0181 a0001c0001t0001g0184 a0001c0001t0001g0185 a0001c0001t0001g0186 a0001c0001t0001g0187 a0001c0001t0001g0259 a0001c0001t0001g0260 a0001c0001t0002g0042 a0001c0001t0002g0182 a0001c0001t0003g0150 a0001c0001t0003g0157 a0001c0001t0007g0027 a0001c0001t0007g0028 a0001c0001t0019g0153 a0001c0001t0023g0025 a0001c0001t0030g0183 a0001c0003t0021g0043 a0002c0002t0003g0007 a0002c0002t0003g0147 a0002c0002t0003g0148 a0002c0002t0003g0159 a0002c0002t0003g0172 a0007c0010t0001g0156	56	268	0.2090	15	c.-5+ others(30): Show c.-5+5662_-5+5676dupTATTTTATTTTATTT	LRRC8C	ENSG00000171488.15	transcript	ENST00000370454.9	protein_coding	1/2		INFO_REALIGN_3_PRIME	chr1	TogoVar
LRRC8D_chr1_89816032_89941611	89903202	T T	TGAGTGCA others(8): Show TGAGTGCAAAGGCAGA	intron_variant intron_variant	MODIFIER	HG00639.hp1 HG00735.hp1 HG00741.hp2 others(49): Show HG00639.hp1 HG00735.hp1 HG00741.hp2 HG01074.hp2 HG01081.hp1 HG01123.hp2 HG01175.hp2 HG01243.hp1 HG01255.hp1 HG01358.hp1 HG01515.hp1 HG01884.hp1 HG01891.hp1 HG01891.hp2 HG02109.hp2 HG02257.hp2 HG02280.hp1 HG02280.hp2 HG02486.hp1 HG02559.hp1 HG02559.hp2 HG02572.hp1 HG02622.hp2 HG02647.hp2 HG02717.hp1 HG02809.hp1 HG02886.hp1 HG02886.hp2 HG02897.hp1 HG02970.hp1 HG02970.hp2 HG03130.hp2 HG03195.hp2 HG03453.hp1 HG03453.hp2 HG03471.hp2 HG03486.hp2 HG03540.hp1 HG03540.hp2 HG03579.hp2 HG03688.hp2 HG03710.hp1 HG04228.hp2 HG06807.hp1 HG06807.hp2 NA18522.hp1 NA18906.hp1 NA18990.hp2 NA19043.hp2 NA19077.hp2 NA20129.hp1 NA20129.hp2	a0001 a0001	a0001c0001 a0001c0002 a0001c0005 a0001c0001 a0001c0002 a0001c0005	a0001c0001t0001 a0001c0001t0002 a0001c0001t0003 others(5): Show a0001c0001t0001 a0001c0001t0002 a0001c0001t0003 a0001c0001t0004 a0001c0001t0006 a0001c0001t0009 a0001c0002t0004 a0001c0005t0002	a0001c0001t0001g0003 a0001c0001t0001g0008 a0001c0001t0001g0009 others(49): Show a0001c0001t0001g0003 a0001c0001t0001g0008 a0001c0001t0001g0009 a0001c0001t0001g0029 a0001c0001t0001g0031 a0001c0001t0001g0035 a0001c0001t0001g0036 a0001c0001t0001g0042 a0001c0001t0001g0061 a0001c0001t0001g0064 a0001c0001t0001g0066 a0001c0001t0001g0072 a0001c0001t0001g0076 a0001c0001t0001g0078 a0001c0001t0001g0089 a0001c0001t0001g0098 a0001c0001t0001g0102 a0001c0001t0001g0110 a0001c0001t0001g0117 a0001c0001t0001g0129 a0001c0001t0001g0134 a0001c0001t0001g0140 a0001c0001t0001g0142 a0001c0001t0001g0143 a0001c0001t0001g0150 a0001c0001t0001g0154 a0001c0001t0001g0161 a0001c0001t0001g0168 a0001c0001t0001g0175 a0001c0001t0001g0186 a0001c0001t0001g0204 a0001c0001t0002g0002 a0001c0001t0002g0004 a0001c0001t0002g0007 a0001c0001t0002g0022 a0001c0001t0002g0043 a0001c0001t0002g0059 a0001c0001t0002g0084 a0001c0001t0002g0100 a0001c0001t0002g0108 a0001c0001t0002g0109 a0001c0001t0002g0111 a0001c0001t0002g0138 a0001c0001t0002g0191 a0001c0001t0002g0208 a0001c0001t0003g0087 a0001c0001t0004g0141 a0001c0001t0006g0021 a0001c0001t0009g0139 a0001c0002t0004g0014 a0001c0002t0004g0123 a0001c0005t0002g0163	52	210	0.2476	15	c.-2- others(32): Show c.-2-29862_-2-29861insTGCAAAGGCAGAGAG	LRRC8D	ENSG00000171492.14	transcript	ENST00000337338.9	protein_coding	2/2		INFO_REALIGN_3_PRIME	chr1	TogoVar
LRRC8E_chr19_7883510_7907016	7884535	A A	AGGAGGAG others(8): Show AGGAGGAGGGGGAGGG	upstream_gene_variant upstream_gene_variant	MODIFIER	HG00558.hp1 NA18950.hp2 NA19091.hp1 HG00558.hp1 NA18950.hp2 NA19091.hp1	a0001 a0002 a0001 a0002	a0001c0001 a0002c0010 a0001c0001 a0002c0010	a0001c0001t0001 a0001c0001t0002 a0002c0010t0003 a0001c0001t0001 a0001c0001t0002 a0002c0010t0003	a0001c0001t0001g0057 a0001c0001t0002g0033 a0002c0010t0003g0058 a0001c0001t0001g0057 a0001c0001t0002g0033 a0002c0010t0003g0058	3	390	0.0077	15	c.-40 others(26): Show c.-4071_-4070insGGAGGAGGGGGAGGG	LRRC8E	ENSG00000171017.11	transcript	ENST00000306708.11	protein_coding		3974		chr19	TogoVar
LRRC9_chr14_59915144_60071817	59965882	C C	CAAAAAAA others(8): Show CAAAAAAAAAAAAAAA	intron_variant intron_variant	MODIFIER	HG02895.hp2 HG02895.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0093 a0001c0001t0001g0093	1	322	0.0031	15	c.121 others(32): Show c.1212-683_1212-669dupAAAAAAAAAAAAAAA	LRRC9	ENSG00000131951.12	transcript	ENST00000570145.2	protein_coding	10/32		INFO_REALIGN_3_PRIME	chr14	TogoVar
LRRC9_chr14_59915144_60071817	60067740	A A	ATATATAT others(8): Show ATATATATATATATAT	downstream_gene_variant downstream_gene_variant	MODIFIER	HG01074.hp1 NA21309.hp1 HG01074.hp1 NA21309.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0011 a0001c0001t0016 a0001c0001t0011 a0001c0001t0016	a0001c0001t0011g0078 a0001c0001t0016g0105 a0001c0001t0011g0078 a0001c0001t0016g0105	2	322	0.0062	15	c.43 others(26): Show c.4378_*4379insTATATATATATATAT	LRRC9	ENSG00000131951.12	transcript	ENST00000570145.2	protein_coding		924		chr14	TogoVar
LRRD1_chr7_92139842_92184142	92174509	A A	ATATATAT others(8): Show ATATATATATTTTTTT	intron_variant intron_variant	MODIFIER	HG03453.hp2 HG03453.hp2	a0002 a0002	a0002c0002 a0002c0002	a0002c0002t0001 a0002c0002t0001	a0002c0002t0001g0232 a0002c0002t0001g0232	1	360	0.0028	15	c.-75 others(32): Show c.-75+4497_-75+4498insAAAAAAATATATATA	LRRD1	ENSG00000240720.10	transcript	ENST00000458448.6	protein_coding	1/5			chr7	TogoVar

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