Joint Open Genome and Omics Platform (JoGo)

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regionname	pos	ref	alt	annotation	impact	samples	ahapids	chapids	thapids	thapids	ac	an	af	len	hgvs_c	genename	geneid	featuretype	featureid	transcript_biotype	rank	distance	status	chr	external
NCKAP5_chr2_132666788_133573463	132949003	T T	TTAAAAGA others(8): Show TTAAAAGAAAAGAAAA	intron_variant intron_variant	MODIFIER	HG00673.hp2 HG00738.hp2 HG01081.hp1 others(5): Show HG00673.hp2 HG00738.hp2 HG01081.hp1 HG02622.hp2 HG02630.hp1 HG06807.hp2 NA18983.hp1 NA19004.hp2	a0001 a0003 a0005 others(3): Show a0001 a0003 a0005 a0007 a0010 a0018	a0001c0015 a0003c0004 a0005c0007 others(3): Show a0001c0015 a0003c0004 a0005c0007 a0007c0005 a0010c0011 a0018c0012	a0001c0015t0001 a0003c0004t0001 a0005c0007t0001 others(3): Show a0001c0015t0001 a0003c0004t0001 a0005c0007t0001 a0007c0005t0001 a0010c0011t0001 a0018c0012t0001	a0001c0015t0001g0023 a0003c0004t0001g0038 a0003c0004t0001g0041 others(5): Show a0001c0015t0001g0023 a0003c0004t0001g0038 a0003c0004t0001g0041 a0005c0007t0001g0048 a0005c0007t0001g0050 a0007c0005t0001g0009 a0010c0011t0001g0008 a0018c0012t0001g0031	8	70	0.1143	15	c.579 others(34): Show c.579+14716_579+14717insTTTTCTTTTCTTTTA	NCKAP5	ENSG00000176771.18	transcript	ENST00000409261.6	protein_coding	8/19			chr2	TogoVar
NCKAP5_chr2_132666788_133573463	133210173	A A	AATAATAT others(8): Show AATAATATAATATAAT	intron_variant intron_variant	MODIFIER	HG00738.hp1 HG02630.hp2 HG03098.hp1 others(2): Show HG00738.hp1 HG02630.hp2 HG03098.hp1 HG03453.hp1 NA18906.hp2	a0001 a0002 a0003 others(2): Show a0001 a0002 a0003 a0008 a0014	a0001c0009 a0002c0002 a0003c0004 others(2): Show a0001c0009 a0002c0002 a0003c0004 a0008c0008 a0014c0027	a0001c0009t0001 a0002c0002t0004 a0003c0004t0001 others(2): Show a0001c0009t0001 a0002c0002t0004 a0003c0004t0001 a0008c0008t0002 a0014c0027t0001	a0001c0009t0001g0042 a0002c0002t0004g0004 a0003c0004t0001g0039 others(2): Show a0001c0009t0001g0042 a0002c0002t0004g0004 a0003c0004t0001g0039 a0008c0008t0002g0025 a0014c0027t0001g0044	5	70	0.0714	15	c.207 others(32): Show c.207+3528_207+3542dupATTATATTATATTAT	NCKAP5	ENSG00000176771.18	transcript	ENST00000409261.6	protein_coding	5/19			chr2	TogoVar
NCKAP5_chr2_132666788_133573463	133249998	T T	TTTATTAT others(8): Show TTTATTATTATTATTA	intron_variant intron_variant	MODIFIER	HG00673.hp1 HG00738.hp2 HG01099.hp1 others(11): Show HG00673.hp1 HG00738.hp2 HG01099.hp1 HG01109.hp2 HG02257.hp2 HG02886.hp1 HG02922.hp1 HG02965.hp1 HG03130.hp1 HG03471.hp1 HG03486.hp1 HG06807.hp1 HG06807.hp2 NA21309.hp2	a0001 a0003 a0004 others(4): Show a0001 a0003 a0004 a0005 a0007 a0010 a0013	a0001c0001 a0003c0025 a0004c0003 others(5): Show a0001c0001 a0003c0025 a0004c0003 a0005c0007 a0005c0018 a0007c0005 a0010c0011 a0013c0019	a0001c0001t0001 a0001c0001t0002 a0003c0025t0003 others(8): Show a0001c0001t0001 a0001c0001t0002 a0003c0025t0003 a0004c0003t0001 a0004c0003t0002 a0005c0007t0001 a0005c0018t0002 a0007c0005t0001 a0007c0005t0007 a0010c0011t0001 a0013c0019t0003	a0001c0001t0001g0022 a0001c0001t0002g0067 a0003c0025t0003g0021 others(11): Show a0001c0001t0001g0022 a0001c0001t0002g0067 a0003c0025t0003g0021 a0004c0003t0001g0014 a0004c0003t0001g0035 a0004c0003t0002g0026 a0005c0007t0001g0012 a0005c0007t0001g0048 a0005c0018t0002g0063 a0007c0005t0001g0029 a0007c0005t0001g0059 a0007c0005t0007g0066 a0010c0011t0001g0008 a0013c0019t0003g0036	14	70	0.2000	15	c.144 others(34): Show c.144-36234_144-36220dupTAATAATAATAATAA	NCKAP5	ENSG00000176771.18	transcript	ENST00000409261.6	protein_coding	4/19			chr2	TogoVar
NCKAP5_chr2_132666788_133573463	133558704	C C	CAAAAAAA others(8): Show CAAAAAAAAAAAAAAA	intron_variant intron_variant	MODIFIER	HG02280.hp2 NA19030.hp1 HG02280.hp2 NA19030.hp1	a0001 a0002 a0001 a0002	a0001c0001 a0002c0010 a0001c0001 a0002c0010	a0001c0001t0001 a0002c0010t0002 a0001c0001t0001 a0002c0010t0002	a0001c0001t0001g0053 a0002c0010t0002g0054 a0001c0001t0001g0053 a0002c0010t0002g0054	2	70	0.0286	15	c.-62 others(30): Show c.-62+331_-62+345dupTTTTTTTTTTTTTTT	NCKAP5	ENSG00000176771.18	transcript	ENST00000409261.6	protein_coding	2/19			chr2	TogoVar
NCKAP5_chr2_132666788_133573463	133567700	T T	TGTGTGTG others(8): Show TGTGTGTGTGTGTGTG	intron_variant intron_variant	MODIFIER	HG01175.hp2 HG01175.hp2	a0006 a0006	a0006c0006 a0006c0006	a0006c0006t0001 a0006c0006t0001	a0006c0006t0001g0057 a0006c0006t0001g0057	1	70	0.0143	15	c.-13 others(32): Show c.-130+515_-130+516insCACACACACACACAC	NCKAP5	ENSG00000176771.18	transcript	ENST00000409261.6	protein_coding	1/19			chr2	TogoVar
NCKIPSD_chr3_48668844_48690915	48687070	C C	CCTTTTTT others(8): Show CCTTTTTTTTTTTTTT	upstream_gene_variant upstream_gene_variant	MODIFIER	HG00140.hp1 HG00544.hp2 HG01952.hp2 others(8): Show HG00140.hp1 HG00544.hp2 HG01952.hp2 HG02109.hp2 HG02135.hp2 HG02809.hp1 HG02970.hp1 HG02970.hp2 HG03130.hp2 NA18970.hp2 NA18979.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0001 a0001c0001t0001g0003 a0001c0001t0001g0005 others(5): Show a0001c0001t0001g0001 a0001c0001t0001g0003 a0001c0001t0001g0005 a0001c0001t0001g0006 a0001c0001t0001g0009 a0001c0001t0001g0081 a0001c0001t0001g0087 a0001c0001t0001g0129	11	310	0.0355	15	c.-12 others(26): Show c.-1264_-1263insAAAAAAAAAAAAAAG	NCKIPSD	ENSG00000213672.8	transcript	ENST00000294129.7	protein_coding		1156		chr3	TogoVar
NCMAP_chr1_24551087_24614328	24573952	C C	CAAAAAAA others(8): Show CAAAAAAAAAAAAAAA	intron_variant intron_variant	MODIFIER	HG01891.hp1 HG02055.hp1 HG02109.hp2 others(5): Show HG01891.hp1 HG02055.hp1 HG02109.hp2 HG02486.hp1 HG02615.hp2 HG03453.hp1 HG03579.hp1 NA19000.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0011 a0001c0001t0014 others(1): Show a0001c0001t0001 a0001c0001t0011 a0001c0001t0014 a0001c0001t0017	a0001c0001t0001g0158 a0001c0001t0001g0322 a0001c0001t0001g0376 others(5): Show a0001c0001t0001g0158 a0001c0001t0001g0322 a0001c0001t0001g0376 a0001c0001t0011g0379 a0001c0001t0011g0380 a0001c0001t0014g0397 a0001c0001t0014g0398 a0001c0001t0017g0399	8	402	0.0199	15	c.-8+ others(32): Show c.-8+17788_-8+17802dupAAAAAAAAAAAAAAA	NCMAP	ENSG00000184454.7	transcript	ENST00000374392.3	protein_coding	1/3		INFO_REALIGN_3_PRIME	chr1	TogoVar
NCOA1_chr2_24486254_24775702	24523605	C C	CAAAAAAA others(8): Show CAAAAAAAAAAAAAAA	intron_variant intron_variant	MODIFIER	HG00673.hp1 HG01074.hp1 HG01109.hp2 others(21): Show HG00673.hp1 HG01074.hp1 HG01109.hp2 HG01256.hp1 HG01261.hp1 HG01516.hp1 HG01517.hp2 HG02630.hp2 HG02698.hp2 HG02723.hp2 HG02735.hp1 HG02886.hp2 HG03453.hp2 HG03491.hp1 HG06807.hp2 NA18612.hp2 NA18952.hp2 NA18968.hp2 NA19002.hp2 NA19066.hp2 NA19070.hp1 NA19085.hp1 NA19091.hp2 NA21309.hp2	a0001 a0001	a0001c0001 a0001c0005 a0001c0008 a0001c0001 a0001c0005 a0001c0008	a0001c0001t0001 a0001c0001t0005 a0001c0001t0007 others(2): Show a0001c0001t0001 a0001c0001t0005 a0001c0001t0007 a0001c0005t0012 a0001c0008t0002	a0001c0001t0001g0007 a0001c0001t0001g0010 a0001c0001t0001g0019 others(21): Show a0001c0001t0001g0007 a0001c0001t0001g0010 a0001c0001t0001g0019 a0001c0001t0001g0124 a0001c0001t0001g0227 a0001c0001t0001g0252 a0001c0001t0001g0253 a0001c0001t0001g0272 a0001c0001t0001g0274 a0001c0001t0001g0275 a0001c0001t0001g0279 a0001c0001t0001g0280 a0001c0001t0001g0284 a0001c0001t0001g0285 a0001c0001t0001g0286 a0001c0001t0001g0287 a0001c0001t0001g0310 a0001c0001t0005g0223 a0001c0001t0005g0228 a0001c0001t0005g0238 a0001c0001t0007g0002 a0001c0001t0007g0003 a0001c0005t0012g0081 a0001c0008t0002g0074	24	314	0.0764	15	c.-39 others(36): Show c.-396+32014_-396+32028dupAAAAAAAAAAAAAAA	NCOA1	ENSG00000084676.16	transcript	ENST00000348332.8	protein_coding	1/22		INFO_REALIGN_3_PRIME	chr2	TogoVar
NCOA1_chr2_24486254_24775702	24552354	T T	TATATATA others(8): Show TATATATATATATATA	intron_variant intron_variant	MODIFIER	NA18990.hp1 NA19062.hp1 NA18990.hp1 NA19062.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0004 a0001c0001t0008 a0001c0001t0004 a0001c0001t0008	a0001c0001t0004g0200 a0001c0001t0008g0190 a0001c0001t0004g0200 a0001c0001t0008g0190	2	314	0.0064	15	c.-39 others(36): Show c.-395-11941_-395-11940insATATATATATATATA	NCOA1	ENSG00000084676.16	transcript	ENST00000348332.8	protein_coding	1/22			chr2	TogoVar
NCOA1_chr2_24486254_24775702	24576149	G G	GTTTTTTT others(8): Show GTTTTTTTTTTTTTTT	intron_variant intron_variant	MODIFIER	HG02698.hp1 NA18943.hp1 NA19066.hp1 HG02698.hp1 NA18943.hp1 NA19066.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0004 a0001c0001t0008 a0001c0001t0004 a0001c0001t0008	a0001c0001t0004g0193 a0001c0001t0004g0209 a0001c0001t0008g0191 a0001c0001t0004g0193 a0001c0001t0004g0209 a0001c0001t0008g0191	3	314	0.0096	15	c.-25 others(34): Show c.-259-8314_-259-8313insTTTTTTTTTTTTTTT	NCOA1	ENSG00000084676.16	transcript	ENST00000348332.8	protein_coding	2/22		INFO_REALIGN_3_PRIME	chr2	TogoVar
NCOA1_chr2_24486254_24775702	24608246	C C	CTATTATT others(8): Show CTATTATTATTATTAT	intron_variant intron_variant	MODIFIER	NA18959.hp1 NA18959.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0004 a0001c0001t0004	a0001c0001t0004g0197 a0001c0001t0004g0197	1	314	0.0032	15	c.-17 others(36): Show c.-175+23724_-175+23738dupATTATTATTATTATT	NCOA1	ENSG00000084676.16	transcript	ENST00000348332.8	protein_coding	3/22		INFO_REALIGN_3_PRIME	chr2	TogoVar
NCOA1_chr2_24486254_24775702	24614199	C C	CTTTTTTT others(8): Show CTTTTTTTTTTTTTTT	intron_variant intron_variant	MODIFIER	HG01256.hp2 HG02451.hp2 HG02717.hp1 others(6): Show HG01256.hp2 HG02451.hp2 HG02717.hp1 HG03486.hp2 NA18944.hp2 NA18946.hp2 NA18975.hp2 NA18993.hp1 NA20805.hp1	a0001 a0001	a0001c0001 a0001c0002 a0001c0001 a0001c0002	a0001c0001t0001 a0001c0001t0004 a0001c0002t0003 a0001c0001t0001 a0001c0001t0004 a0001c0002t0003	a0001c0001t0001g0230 a0001c0001t0001g0271 a0001c0001t0001g0273 others(6): Show a0001c0001t0001g0230 a0001c0001t0001g0271 a0001c0001t0001g0273 a0001c0001t0004g0189 a0001c0002t0003g0031 a0001c0002t0003g0033 a0001c0002t0003g0043 a0001c0002t0003g0056 a0001c0002t0003g0061	9	314	0.0287	15	c.-17 others(36): Show c.-175+29657_-175+29671dupTTTTTTTTTTTTTTT	NCOA1	ENSG00000084676.16	transcript	ENST00000348332.8	protein_coding	3/22		INFO_REALIGN_3_PRIME	chr2	TogoVar
NCOA1_chr2_24486254_24775702	24621432	A A	ATTTTTTT others(8): Show ATTTTTTTTTTTTTTT	intron_variant intron_variant	MODIFIER	NA18973.hp2 NA18973.hp2	a0001 a0001	a0001c0002 a0001c0002	a0001c0002t0003 a0001c0002t0003	a0001c0002t0003g0050 a0001c0002t0003g0050	1	314	0.0032	15	c.-17 others(36): Show c.-174-22515_-174-22501dupTTTTTTTTTTTTTTT	NCOA1	ENSG00000084676.16	transcript	ENST00000348332.8	protein_coding	3/22		INFO_REALIGN_3_PRIME	chr2	TogoVar
NCOA1_chr2_24486254_24775702	24765896	C C	CTTTTTTT others(8): Show CTTTTTTTTTTTTTTT	intron_variant intron_variant	MODIFIER	HG03239.hp2 NA19030.hp2 NA19043.hp1 others(1): Show HG03239.hp2 NA19030.hp2 NA19043.hp1 NA21309.hp1	a0001 a0001	a0001c0002 a0001c0002	a0001c0002t0006 a0001c0002t0024 a0001c0002t0006 a0001c0002t0024	a0001c0002t0006g0115 a0001c0002t0006g0121 a0001c0002t0006g0123 others(1): Show a0001c0002t0006g0115 a0001c0002t0006g0121 a0001c0002t0006g0123 a0001c0002t0024g0122	4	314	0.0127	15	c.415 others(34): Show c.4156-2320_4156-2306dupTTTTTTTTTTTTTTT	NCOA1	ENSG00000084676.16	transcript	ENST00000348332.8	protein_coding	22/22		INFO_REALIGN_3_PRIME	chr2	TogoVar
NCOA2_chr8_70104782_70408808	70159242	A A	ATATATAT others(8): Show ATATATATATATATTT	intron_variant intron_variant	MODIFIER	HG02109.hp2 NA18947.hp2 NA19090.hp2 HG02109.hp2 NA18947.hp2 NA19090.hp2	a0001 a0002 a0001 a0002	a0001c0001 a0002c0002 a0001c0001 a0002c0002	a0001c0001t0005 a0002c0002t0015 a0001c0001t0005 a0002c0002t0015	a0001c0001t0005g0062 a0002c0002t0015g0015 a0002c0002t0015g0016 a0001c0001t0005g0062 a0002c0002t0015g0015 a0002c0002t0015g0016	3	322	0.0093	15	c.112 others(32): Show c.1124+262_1124+263insAAATATATATATATA	NCOA2	ENSG00000140396.13	transcript	ENST00000452400.7	protein_coding	10/22			chr8	TogoVar
NCOA2_chr8_70104782_70408808	70207862	C C	CAAAAAAA others(8): Show CAAAAAAAAAAAAAAA	intron_variant intron_variant	MODIFIER	HG03098.hp2 HG03098.hp2	a0001 a0001	a0001c0005 a0001c0005	a0001c0005t0012 a0001c0005t0012	a0001c0005t0012g0049 a0001c0005t0012g0049	1	322	0.0031	15	c.259 others(32): Show c.259+6026_259+6040dupTTTTTTTTTTTTTTT	NCOA2	ENSG00000140396.13	transcript	ENST00000452400.7	protein_coding	4/22			chr8	TogoVar
NCOA2_chr8_70104782_70408808	70265812	T T	TTTGTTGT others(8): Show TTTGTTGTTGTTGTTG	intron_variant intron_variant	MODIFIER	HG02615.hp1 HG02615.hp1	a0002 a0002	a0002c0002 a0002c0002	a0002c0002t0001 a0002c0002t0001	a0002c0002t0001g0070 a0002c0002t0001g0070	1	322	0.0031	15	c.-20 others(34): Show c.-20+30917_-20+30931dupCAACAACAACAACAA	NCOA2	ENSG00000140396.13	transcript	ENST00000452400.7	protein_coding	2/22			chr8	TogoVar
NCOA2_chr8_70104782_70408808	70314180	C C	CAAAAAAA others(8): Show CAAAAAAAAAAAAAAA	intron_variant intron_variant	MODIFIER	HG02155.hp1 HG02155.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0299 a0001c0001t0001g0299	1	322	0.0031	15	c.-76 others(34): Show c.-76-17395_-76-17381dupTTTTTTTTTTTTTTT	NCOA2	ENSG00000140396.13	transcript	ENST00000452400.7	protein_coding	1/22			chr8	TogoVar
NCOA2_chr8_70104782_70408808	70321793	C C	CTTTTTTT others(8): Show CTTTTTTTTTTTTTTT	intron_variant intron_variant	MODIFIER	NA18940.hp2 NA18942.hp1 NA18964.hp1 others(2): Show NA18940.hp2 NA18942.hp1 NA18964.hp1 NA18969.hp2 NA19068.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0006 a0001c0001t0001 a0001c0001t0006	a0001c0001t0001g0244 a0001c0001t0001g0254 a0001c0001t0001g0259 others(2): Show a0001c0001t0001g0244 a0001c0001t0001g0254 a0001c0001t0001g0259 a0001c0001t0001g0281 a0001c0001t0006g0261	5	322	0.0155	15	c.-76 others(34): Show c.-76-25008_-76-24994dupAAAAAAAAAAAAAAA	NCOA2	ENSG00000140396.13	transcript	ENST00000452400.7	protein_coding	1/22			chr8	TogoVar
NCOA2_chr8_70104782_70408808	70335155	A A	AAAAAAAA others(8): Show AAAAAAAAAAAAAAAT	intron_variant intron_variant	MODIFIER	HG02723.hp1 HG02723.hp1	a0002 a0002	a0002c0002 a0002c0002	a0002c0002t0027 a0002c0002t0027	a0002c0002t0027g0014 a0002c0002t0027g0014	1	322	0.0031	15	c.-76 others(34): Show c.-76-38356_-76-38355insATTTTTTTTTTTTTT	NCOA2	ENSG00000140396.13	transcript	ENST00000452400.7	protein_coding	1/22			chr8	TogoVar
NCOA2_chr8_70104782_70408808	70405437	G G	GTTTTTTT others(8): Show GTTTTTTTTTTTTTTT	upstream_gene_variant upstream_gene_variant	MODIFIER	HG03195.hp1 NA18522.hp2 NA19043.hp2 HG03195.hp1 NA18522.hp2 NA19043.hp2	a0001 a0001	a0001c0004 a0001c0004	a0001c0004t0007 a0001c0004t0007	a0001c0004t0007g0043 a0001c0004t0007g0045 a0001c0004t0007g0047 a0001c0004t0007g0043 a0001c0004t0007g0045 a0001c0004t0007g0047	3	322	0.0093	15	c.-18 others(26): Show c.-1815_-1814insAAAAAAAAAAAAAAA	NCOA2	ENSG00000140396.13	transcript	ENST00000452400.7	protein_coding		1630		chr8	TogoVar
NCOA3_chr20_47496887_47661872	47511556	T T	TATATATA others(8): Show TATATATACACATATA	intron_variant intron_variant	MODIFIER	HG00639.hp2 HG01074.hp1 HG01099.hp2 others(6): Show HG00639.hp2 HG01074.hp1 HG01099.hp2 HG01943.hp1 HG01981.hp2 HG02273.hp2 HG03516.hp1 HG03834.hp2 NA19070.hp2	a0001 a0002 a0006 a0001 a0002 a0006	a0001c0001 a0002c0002 a0006c0009 a0001c0001 a0002c0002 a0006c0009	a0001c0001t0003 a0002c0002t0002 a0006c0009t0002 others(1): Show a0001c0001t0003 a0002c0002t0002 a0006c0009t0002 a0006c0009t0040	a0001c0001t0003g0176 a0002c0002t0002g0119 a0002c0002t0002g0130 others(6): Show a0001c0001t0003g0176 a0002c0002t0002g0119 a0002c0002t0002g0130 a0002c0002t0002g0158 a0002c0002t0002g0159 a0002c0002t0002g0175 a0006c0009t0002g0120 a0006c0009t0002g0122 a0006c0009t0040g0121	9	316	0.0285	15	c.-99 others(32): Show c.-99+9537_-99+9538insATATATACACATATA	NCOA3	ENSG00000124151.19	transcript	ENST00000371998.8	protein_coding	1/22			chr20	TogoVar
NCOA3_chr20_47496887_47661872	47511556	T T	TATATATA others(8): Show TATATATATACATATA	intron_variant intron_variant	MODIFIER	HG03486.hp1 HG03486.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0003 a0001c0001t0003	a0001c0001t0003g0278 a0001c0001t0003g0278	1	316	0.0032	15	c.-99 others(32): Show c.-99+9537_-99+9538insATATATATACATATA	NCOA3	ENSG00000124151.19	transcript	ENST00000371998.8	protein_coding	1/22			chr20	TogoVar
NCOA3_chr20_47496887_47661872	47522406	C C	CTTTTTTT others(8): Show CTTTTTTTTTTTTTTT	intron_variant intron_variant	MODIFIER	HG01106.hp2 HG03209.hp1 HG01106.hp2 HG03209.hp1	a0007 a0007	a0007c0010 a0007c0010	a0007c0010t0014 a0007c0010t0014	a0007c0010t0014g0035 a0007c0010t0014g0036 a0007c0010t0014g0035 a0007c0010t0014g0036	2	316	0.0063	15	c.-99 others(34): Show c.-99+20391_-99+20405dupTTTTTTTTTTTTTTT	NCOA3	ENSG00000124151.19	transcript	ENST00000371998.8	protein_coding	1/22		INFO_REALIGN_3_PRIME	chr20	TogoVar
NCOA3_chr20_47496887_47661872	47541352	C C	CCCCCTCC others(8): Show CCCCCTCCCCTCCCCT	intron_variant intron_variant	MODIFIER	HG00642.hp1 HG01106.hp1 NA18977.hp1 others(1): Show HG00642.hp1 HG01106.hp1 NA18977.hp1 NA18995.hp1	a0001 a0002 a0003 a0001 a0002 a0003	a0001c0001 a0002c0002 a0003c0004 a0001c0001 a0002c0002 a0003c0004	a0001c0001t0001 a0002c0002t0041 a0002c0002t0044 others(1): Show a0001c0001t0001 a0002c0002t0041 a0002c0002t0044 a0003c0004t0003	a0001c0001t0001g0261 a0002c0002t0041g0152 a0002c0002t0044g0114 others(1): Show a0001c0001t0001g0261 a0002c0002t0041g0152 a0002c0002t0044g0114 a0003c0004t0003g0133	4	316	0.0127	15	c.-99 others(34): Show c.-99+39383_-99+39397dupTCCCCTCCCCTCCCC	NCOA3	ENSG00000124151.19	transcript	ENST00000371998.8	protein_coding	1/22		INFO_REALIGN_3_PRIME	chr20	TogoVar
NCOA3_chr20_47496887_47661872	47542009	G G	GTTTTTTT others(8): Show GTTTTTTTGTTTTTTT	intron_variant intron_variant	MODIFIER	HG00280.hp1 HG00323.hp1 HG01168.hp2 others(6): Show HG00280.hp1 HG00323.hp1 HG01168.hp2 HG02071.hp2 HG02683.hp2 HG02698.hp2 HG03704.hp1 NA18951.hp1 NA19077.hp2	a0001 a0003 a0001 a0003	a0001c0001 a0003c0004 a0003c0024 a0001c0001 a0003c0004 a0003c0024	a0001c0001t0001 a0003c0004t0003 a0003c0004t0020 others(1): Show a0001c0001t0001 a0003c0004t0003 a0003c0004t0020 a0003c0024t0003	a0001c0001t0001g0293 a0003c0004t0003g0091 a0003c0004t0003g0092 others(6): Show a0001c0001t0001g0293 a0003c0004t0003g0091 a0003c0004t0003g0092 a0003c0004t0003g0100 a0003c0004t0003g0134 a0003c0004t0003g0136 a0003c0004t0003g0200 a0003c0004t0020g0172 a0003c0024t0003g0137	9	316	0.0285	15	c.-99 others(34): Show c.-99+39997_-99+39998insGTTTTTTTTTTTTTT	NCOA3	ENSG00000124151.19	transcript	ENST00000371998.8	protein_coding	1/22		INFO_REALIGN_3_PRIME	chr20	TogoVar
NCOA3_chr20_47496887_47661872	47542009	G G	GTTTTTTT others(8): Show GTTTTTTTTTTTTTTT	intron_variant intron_variant	MODIFIER	HG00558.hp1 HG03688.hp1 HG00558.hp1 HG03688.hp1	a0003 a0013 a0003 a0013	a0003c0004 a0013c0021 a0003c0004 a0013c0021	a0003c0004t0003 a0013c0021t0003 a0003c0004t0003 a0013c0021t0003	a0003c0004t0003g0138 a0013c0021t0003g0165 a0003c0004t0003g0138 a0013c0021t0003g0165	2	316	0.0063	15	c.-99 others(34): Show c.-99+39997_-99+40011dupTTTTTTTTTTTTTTT	NCOA3	ENSG00000124151.19	transcript	ENST00000371998.8	protein_coding	1/22		INFO_REALIGN_3_PRIME	chr20	TogoVar
NCOA3_chr20_47496887_47661872	47542028	T T	TTTTTTTT others(8): Show TTTTTTTTTTTTTTTG	intron_variant intron_variant	MODIFIER	HG02630.hp2 HG02818.hp2 NA18906.hp2 HG02630.hp2 HG02818.hp2 NA18906.hp2	a0002 a0002	a0002c0002 a0002c0002	a0002c0002t0009 a0002c0002t0019 a0002c0002t0009 a0002c0002t0019	a0002c0002t0009g0059 a0002c0002t0009g0060 a0002c0002t0019g0061 a0002c0002t0009g0059 a0002c0002t0009g0060 a0002c0002t0019g0061	3	316	0.0095	15	c.-99 others(34): Show c.-99+40011_-99+40012insTTTTTTTTTTTTGTT	NCOA3	ENSG00000124151.19	transcript	ENST00000371998.8	protein_coding	1/22		INFO_REALIGN_3_PRIME	chr20	TogoVar
NCOA3_chr20_47496887_47661872	47621654	A A	ATTTTTTT others(8): Show ATTTTTTTTTTTTTTT	intron_variant intron_variant	MODIFIER	HG01106.hp2 HG02257.hp1 HG02622.hp2 others(6): Show HG01106.hp2 HG02257.hp1 HG02622.hp2 HG03209.hp1 NA18941.hp2 NA18947.hp2 NA18956.hp1 NA19043.hp2 NA19056.hp1	a0001 a0006 a0007 others(1): Show a0001 a0006 a0007 a0008	a0001c0003 a0006c0012 a0007c0010 others(1): Show a0001c0003 a0006c0012 a0007c0010 a0008c0017	a0001c0003t0005 a0001c0003t0015 a0006c0012t0015 others(2): Show a0001c0003t0005 a0001c0003t0015 a0006c0012t0015 a0007c0010t0014 a0008c0017t0013	a0001c0003t0005g0050 a0001c0003t0005g0051 a0001c0003t0005g0055 others(6): Show a0001c0003t0005g0050 a0001c0003t0005g0051 a0001c0003t0005g0055 a0001c0003t0015g0057 a0006c0012t0015g0041 a0006c0012t0015g0042 a0007c0010t0014g0035 a0007c0010t0014g0036 a0008c0017t0013g0056	9	316	0.0285	15	c.-19 others(30): Show c.-19-572_-19-558dupTTTTTTTTTTTTTTT	NCOA3	ENSG00000124151.19	transcript	ENST00000371998.8	protein_coding	2/22		INFO_REALIGN_3_PRIME	chr20	TogoVar
NCOA3_chr20_47496887_47661872	47656887	G G	GTTTTTTT others(8): Show GTTTTTTTTTTTTTTT	downstream_gene_variant downstream_gene_variant	MODIFIER	HG01106.hp2 HG02896.hp2 HG01106.hp2 HG02896.hp2	a0002 a0007 a0002 a0007	a0002c0002 a0007c0010 a0002c0002 a0007c0010	a0002c0002t0009 a0007c0010t0014 a0002c0002t0009 a0007c0010t0014	a0002c0002t0009g0047 a0007c0010t0014g0036 a0002c0002t0009g0047 a0007c0010t0014g0036	2	316	0.0063	15	c.34 others(26): Show c.3470_*3471insTTTTTTTTTTTTTTT	NCOA3	ENSG00000124151.19	transcript	ENST00000371998.8	protein_coding		16		chr20	TogoVar
NCOA7_chr6_125785960_125937034	125840868	G G	GTTTTTTT others(8): Show GTTTTTTTTTTTTTTT	intron_variant intron_variant	MODIFIER	HG02698.hp1 HG02818.hp2 HG03041.hp1 HG02698.hp1 HG02818.hp2 HG03041.hp1	a0002 a0003 a0002 a0003	a0002c0002 a0003c0003 a0002c0002 a0003c0003	a0002c0002t0002 a0002c0002t0007 a0003c0003t0003 a0002c0002t0002 a0002c0002t0007 a0003c0003t0003	a0002c0002t0002g0053 a0002c0002t0007g0003 a0003c0003t0003g0004 a0002c0002t0002g0053 a0002c0002t0007g0003 a0003c0003t0003g0004	3	270	0.0111	15	c.51- others(32): Show c.51-14124_51-14110dupTTTTTTTTTTTTTTT	NCOA7	ENSG00000111912.20	transcript	ENST00000392477.7	protein_coding	2/15		INFO_REALIGN_3_PRIME	chr6	TogoVar
NCOR1_chr17_16024157_16220534	16028818	C C	CAAAAAAA others(8): Show CAAAAAAAAAAAAAAA	downstream_gene_variant downstream_gene_variant	MODIFIER	HG01934.hp1 HG01934.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0002 a0001c0001t0002	a0001c0001t0002g0012 a0001c0001t0002g0012	1	282	0.0036	15	c.34 others(26): Show c.3463_*3477dupTTTTTTTTTTTTTTT	NCOR1	ENSG00000141027.23	transcript	ENST00000268712.8	protein_coding		338		chr17	TogoVar
NCOR1_chr17_16024157_16220534	16092695	A A	ATATATAT others(8): Show ATATATATTTTTTTTT	intron_variant intron_variant	MODIFIER	HG02280.hp1 HG02280.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0002 a0001c0001t0002	a0001c0001t0002g0159 a0001c0001t0002g0159	1	282	0.0036	15	c.282 others(32): Show c.2821-638_2821-637insAAAAAAAAATATATA	NCOR1	ENSG00000141027.23	transcript	ENST00000268712.8	protein_coding	21/45			chr17	TogoVar
NCOR1_chr17_16024157_16220534	16092696	T T	TATATATA others(8): Show TATATATATATATATA	intron_variant intron_variant	MODIFIER	NA18947.hp2 NA18947.hp2	a0001 a0001	a0001c0003 a0001c0003	a0001c0003t0003 a0001c0003t0003	a0001c0003t0003g0276 a0001c0003t0003g0276	1	282	0.0036	15	c.282 others(32): Show c.2821-639_2821-638insTATATATATATATAT	NCOR1	ENSG00000141027.23	transcript	ENST00000268712.8	protein_coding	21/45			chr17	TogoVar
NCOR1_chr17_16024157_16220534	16106883	A A	ATATATAT others(8): Show ATATATATATATTTTT	intron_variant intron_variant	MODIFIER	HG02280.hp1 HG02280.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0002 a0001c0001t0002	a0001c0001t0002g0159 a0001c0001t0002g0159	1	282	0.0036	15	c.218 others(34): Show c.2182+1902_2182+1903insAAAAATATATATATA	NCOR1	ENSG00000141027.23	transcript	ENST00000268712.8	protein_coding	19/45			chr17	TogoVar
NCOR1_chr17_16024157_16220534	16106883	A A	ATATATAT others(8): Show ATATATATATTTTTTT	intron_variant intron_variant	MODIFIER	NA18986.hp1 NA18986.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0002 a0001c0001t0002	a0001c0001t0002g0158 a0001c0001t0002g0158	1	282	0.0036	15	c.218 others(34): Show c.2182+1902_2182+1903insAAAAAAATATATATA	NCOR1	ENSG00000141027.23	transcript	ENST00000268712.8	protein_coding	19/45			chr17	TogoVar
NCOR1_chr17_16024157_16220534	16140997	C C	CAAAAAAA others(8): Show CAAAAAAAAAAAAAAA	intron_variant intron_variant	MODIFIER	HG00621.hp1 HG02040.hp1 HG02080.hp1 others(12): Show HG00621.hp1 HG02040.hp1 HG02080.hp1 HG02280.hp1 HG03688.hp1 HG04228.hp2 NA18960.hp1 NA18980.hp1 NA18982.hp2 NA18986.hp1 NA18987.hp1 NA18990.hp1 NA18995.hp1 NA19004.hp2 NA19057.hp1	a0001 a0001	a0001c0001 a0001c0018 a0001c0001 a0001c0018	a0001c0001t0002 a0001c0001t0022 a0001c0018t0002 a0001c0001t0002 a0001c0001t0022 a0001c0018t0002	a0001c0001t0002g0051 a0001c0001t0002g0149 a0001c0001t0002g0151 others(12): Show a0001c0001t0002g0051 a0001c0001t0002g0149 a0001c0001t0002g0151 a0001c0001t0002g0152 a0001c0001t0002g0153 a0001c0001t0002g0155 a0001c0001t0002g0156 a0001c0001t0002g0157 a0001c0001t0002g0158 a0001c0001t0002g0159 a0001c0001t0002g0161 a0001c0001t0002g0162 a0001c0001t0002g0252 a0001c0001t0022g0160 a0001c0018t0002g0150	15	282	0.0532	15	c.117 others(34): Show c.1174-1812_1174-1811insTTTTTTTTTTTTTTT	NCOR1	ENSG00000141027.23	transcript	ENST00000268712.8	protein_coding	11/45			chr17	TogoVar
NCOR1_chr17_16024157_16220534	16216786	C C	CAAAAAAA others(8): Show CAAAAAAAAAAAAAAA	upstream_gene_variant upstream_gene_variant	MODIFIER	NA19030.hp1 NA19030.hp1	a0001 a0001	a0001c0011 a0001c0011	a0001c0011t0014 a0001c0011t0014	a0001c0011t0014g0280 a0001c0011t0014g0280	1	282	0.0036	15	c.-15 others(26): Show c.-1510_-1496dupTTTTTTTTTTTTTTT	NCOR1	ENSG00000141027.23	transcript	ENST00000268712.8	protein_coding		1253		chr17	TogoVar
NCR3LG1_chr11_17346800_17382341	17350376	C C	CAAAAAAA others(8): Show CAAAAAAAAAAAAAAA	upstream_gene_variant upstream_gene_variant	MODIFIER	HG00621.hp1 HG00741.hp2 HG02055.hp1 others(5): Show HG00621.hp1 HG00741.hp2 HG02055.hp1 HG02165.hp1 NA18948.hp2 NA18949.hp2 NA18952.hp1 NA18994.hp1	a0002 a0002	a0002c0002 a0002c0002	a0002c0002t0003 a0002c0002t0018 a0002c0002t0028 a0002c0002t0003 a0002c0002t0018 a0002c0002t0028	a0002c0002t0003g0015 a0002c0002t0003g0032 a0002c0002t0003g0176 others(4): Show a0002c0002t0003g0015 a0002c0002t0003g0032 a0002c0002t0003g0176 a0002c0002t0003g0179 a0002c0002t0003g0285 a0002c0002t0018g0186 a0002c0002t0028g0001	8	380	0.0211	15	c.-15 others(26): Show c.-1594_-1593insAAAAAAAAAAAAAAA	NCR3LG1	ENSG00000188211.9	transcript	ENST00000338965.9	protein_coding		1423		chr11	TogoVar
NCR3LG1_chr11_17346800_17382341	17362765	T T	TTTCTTTC others(8): Show TTTCTTTCTTCCTTCC	intron_variant intron_variant	MODIFIER	HG01074.hp2 HG01074.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0002 a0001c0001t0002	a0001c0001t0002g0236 a0001c0001t0002g0236	1	380	0.0026	15	c.422 others(32): Show c.422-4241_422-4240insTTTCTTCCTTCCTTC	NCR3LG1	ENSG00000188211.9	transcript	ENST00000338965.9	protein_coding	2/4		INFO_REALIGN_3_PRIME	chr11	TogoVar
NCS1_chr9_130167404_130242303	130174790	C C	CAAAAAAA others(8): Show CAAAAAAAAAAAAAAA	intron_variant intron_variant	MODIFIER	HG04199.hp1 NA20905.hp2 HG04199.hp1 NA20905.hp2	a0001 a0001	a0001c0002 a0001c0002	a0001c0002t0172 a0001c0002t0173 a0001c0002t0172 a0001c0002t0173	a0001c0002t0172g0050 a0001c0002t0173g0051 a0001c0002t0172g0050 a0001c0002t0173g0051	2	348	0.0058	15	c.64+ others(30): Show c.64+2066_64+2080dupAAAAAAAAAAAAAAA	NCS1	ENSG00000107130.10	transcript	ENST00000372398.6	protein_coding	1/7		INFO_REALIGN_3_PRIME	chr9	TogoVar
NCS1_chr9_130167404_130242303	130176042	C C	CAACAGGG others(8): Show CAACAGGGTAACTCAT	intron_variant intron_variant	MODIFIER	NA19006.hp1 NA19006.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0005 a0001c0001t0005	a0001c0001t0005g0262 a0001c0001t0005g0262	1	348	0.0029	15	c.64+ others(30): Show c.64+3316_64+3330dupAACAGGGTAACTCAT	NCS1	ENSG00000107130.10	transcript	ENST00000372398.6	protein_coding	1/7		INFO_REALIGN_3_PRIME	chr9	TogoVar
NCS1_chr9_130167404_130242303	130176195	T T	TTTCTTTC others(8): Show TTTCTTTCTTTCTTTC	intron_variant intron_variant	MODIFIER	HG03688.hp2 HG03688.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0002 a0001c0001t0002	a0001c0001t0002g0108 a0001c0001t0002g0108	1	348	0.0029	15	c.64+ others(30): Show c.64+3470_64+3471insCTTTCTTTCTTTCTT	NCS1	ENSG00000107130.10	transcript	ENST00000372398.6	protein_coding	1/7		INFO_REALIGN_3_PRIME	chr9	TogoVar
NCS1_chr9_130167404_130242303	130178834	T T	TCCCTCCC others(8): Show TCCCTCCCCTCCCCTC	intron_variant intron_variant	MODIFIER	HG02451.hp2 NA19240.hp2 HG02451.hp2 NA19240.hp2	a0001 a0001	a0001c0001 a0001c0002 a0001c0001 a0001c0002	a0001c0001t0176 a0001c0002t0161 a0001c0001t0176 a0001c0002t0161	a0001c0001t0176g0035 a0001c0002t0161g0309 a0001c0001t0176g0035 a0001c0002t0161g0309	2	348	0.0058	15	c.64+ others(30): Show c.64+6140_64+6154dupCTCCCCTCCCCTCCC	NCS1	ENSG00000107130.10	transcript	ENST00000372398.6	protein_coding	1/7		INFO_REALIGN_3_PRIME	chr9	TogoVar
NCS1_chr9_130167404_130242303	130178866	C C	CCTCCCCT others(8): Show CCTCCCCTCCCCTCCT	intron_variant intron_variant	MODIFIER	HG02922.hp1 HG03130.hp2 HG02922.hp1 HG03130.hp2	a0001 a0001	a0001c0002 a0001c0002	a0001c0002t0021 a0001c0002t0148 a0001c0002t0021 a0001c0002t0148	a0001c0002t0021g0034 a0001c0002t0148g0130 a0001c0002t0021g0034 a0001c0002t0148g0130	2	348	0.0058	15	c.64+ others(30): Show c.64+6153_64+6154insTCTCCCCTCCCCTCC	NCS1	ENSG00000107130.10	transcript	ENST00000372398.6	protein_coding	1/7		INFO_REALIGN_3_PRIME	chr9	TogoVar
NCS1_chr9_130167404_130242303	130189879	A A	AAAAAAAT others(8): Show AAAAAAATATATATAT	intron_variant intron_variant	MODIFIER	HG03579.hp2 HG03579.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0138 a0001c0001t0138	a0001c0001t0138g0273 a0001c0001t0138g0273	1	348	0.0029	15	c.65- others(32): Show c.65-11078_65-11077insAAAAATATATATATA	NCS1	ENSG00000107130.10	transcript	ENST00000372398.6	protein_coding	1/7		INFO_REALIGN_3_PRIME	chr9	TogoVar
NCS1_chr9_130167404_130242303	130212031	A A	ACCATGTG others(8): Show ACCATGTGGAAGACAT	intron_variant intron_variant	MODIFIER	HG00735.hp2 HG00741.hp1 HG01070.hp1 others(22): Show HG00735.hp2 HG00741.hp1 HG01070.hp1 HG01081.hp2 HG01175.hp2 HG01261.hp2 HG01358.hp1 HG01978.hp2 HG01981.hp2 HG02273.hp2 HG02293.hp1 HG02300.hp2 HG04199.hp1 NA18747.hp2 NA18963.hp1 NA18969.hp1 NA18980.hp1 NA18983.hp2 NA18985.hp2 NA18990.hp2 NA19012.hp2 NA19060.hp2 NA19068.hp2 NA20752.hp1 NA20905.hp2	a0001 a0001	a0001c0001 a0001c0002 a0001c0001 a0001c0002	a0001c0001t0025 a0001c0001t0187 a0001c0001t0190 others(13): Show a0001c0001t0025 a0001c0001t0187 a0001c0001t0190 a0001c0001t0191 a0001c0001t0192 a0001c0002t0001 a0001c0002t0007 a0001c0002t0023 a0001c0002t0097 a0001c0002t0116 a0001c0002t0125 a0001c0002t0133 a0001c0002t0172 a0001c0002t0173 a0001c0002t0174 a0001c0002t0175	a0001c0001t0025g0113 a0001c0001t0025g0178 a0001c0001t0025g0188 others(22): Show a0001c0001t0025g0113 a0001c0001t0025g0178 a0001c0001t0025g0188 a0001c0001t0187g0200 a0001c0001t0190g0081 a0001c0001t0191g0179 a0001c0001t0192g0171 a0001c0002t0001g0001 a0001c0002t0001g0003 a0001c0002t0001g0006 a0001c0002t0001g0007 a0001c0002t0001g0011 a0001c0002t0001g0042 a0001c0002t0001g0046 a0001c0002t0007g0005 a0001c0002t0023g0054 a0001c0002t0023g0059 a0001c0002t0097g0039 a0001c0002t0116g0060 a0001c0002t0125g0002 a0001c0002t0133g0047 a0001c0002t0172g0050 a0001c0002t0173g0051 a0001c0002t0174g0057 a0001c0002t0175g0043	25	348	0.0718	15	c.90- others(30): Show c.90-5796_90-5782dupGTGGAAGACATCCAT	NCS1	ENSG00000107130.10	transcript	ENST00000372398.6	protein_coding	2/7		INFO_REALIGN_3_PRIME	chr9	TogoVar
NDC1_chr1_53760478_53843296	53772661	A A	AATAACAT others(8): Show AATAACATAACATAAC	intron_variant intron_variant	MODIFIER	HG00673.hp1 HG02895.hp2 HG02897.hp1 others(4): Show HG00673.hp1 HG02895.hp2 HG02897.hp1 HG03041.hp2 HG03225.hp1 HG03710.hp2 NA19081.hp1	a0001 a0001	a0001c0001 a0001c0003 a0001c0001 a0001c0003	a0001c0001t0001 a0001c0001t0002 a0001c0003t0001 a0001c0001t0001 a0001c0001t0002 a0001c0003t0001	a0001c0001t0001g0072 a0001c0001t0002g0031 a0001c0001t0002g0040 others(3): Show a0001c0001t0001g0072 a0001c0001t0002g0031 a0001c0001t0002g0040 a0001c0001t0002g0047 a0001c0003t0001g0005 a0001c0003t0001g0189	7	196	0.0357	15	c.180 others(32): Show c.1801-187_1801-173dupGTTATGTTATGTTAT	NDC1	ENSG00000058804.12	transcript	ENST00000371429.4	protein_coding	16/17			chr1	TogoVar
NDC1_chr1_53760478_53843296	53798138	T T	TTTATTAT others(8): Show TTTATTATTATTATTA	intron_variant intron_variant	MODIFIER	HG02165.hp1 HG02165.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0078 a0001c0001t0001g0078	1	196	0.0051	15	c.122 others(33): Show c.1223-1009_1223-995dupTAATAATAATAATAA	NDC1	ENSG00000058804.12	transcript	ENST00000371429.4	protein_coding	11/17			chr1	TogoVar
NDC1_chr1_53760478_53843296	53825453	C C	CAAAAAAA others(8): Show CAAAAAAAAAAAAAAA	intron_variant intron_variant	MODIFIER	HG03209.hp1 HG03209.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0002 a0001c0001t0002	a0001c0001t0002g0035 a0001c0001t0002g0035	1	196	0.0051	15	c.594 others(30): Show c.594+344_594+345insTTTTTTTTTTTTTTT	NDC1	ENSG00000058804.12	transcript	ENST00000371429.4	protein_coding	5/17			chr1	TogoVar

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