Joint Open Genome and Omics Platform (JoGo)

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ALDH2_chr12_111761933_111822532 / BRCA1_chr17_43039295_43130364 etc.

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Snpeff genename

Sampleids

Snpeff haplotype class

Snpeff annotation impact

Snpeff annotation impact detail

Hapid

Enter haplotype IDs (e.g., a1c1t1g1, a1c1, a1) separated by commas <= a0001 (zero padding also accept)

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regionname	pos	ref	alt	annotation	impact	samples	ahapids	achapids	acthapids	actghapids	ac	an	af	len	hgvs_c	genename	geneid	featuretype	featureid	transcript_biotype	rank	distance	status	chr	external
PGLYRP2_chr19_15463645_15484501	15482563	T T	TCTTCCTT others(8): Show TCTTCCTTCTTCCTTC	upstream_gene_variant upstream_gene_variant	MODIFIER	NA19080.hp1 NA19080.hp1	a0002 a0002	a0002c0002 a0002c0002	a0002c0002t0001 a0002c0002t0001	a0002c0002t0001g0105 a0002c0002t0001g0105	1	382	0.0026	15	c.-31 others(26): Show c.-3193_-3192insGAAGGAAGAAGGAAG	PGLYRP2	ENSG00000161031.13	transcript	ENST00000340880.5	protein_coding		3063		chr19	TogoVar
PGLYRP4_chr1_153325120_153353841	153350648	A A	AGAAAAAG others(8): Show AGAAAAAGAAAGAAAG	upstream_gene_variant upstream_gene_variant	MODIFIER	NA18947.hp2 NA19004.hp1 NA19079.hp2 others(1): Show NA18947.hp2 NA19004.hp1 NA19079.hp2 NA19081.hp1	a0002 a0002	a0002c0002 a0002c0002	a0002c0002t0004 a0002c0002t0004	a0002c0002t0004g0009 a0002c0002t0004g0126 a0002c0002t0004g0009 a0002c0002t0004g0126	4	392	0.0102	15	c.-21 others(26): Show c.-2168_-2167insCTTTCTTTCTTTTTC	PGLYRP4	ENSG00000163218.15	transcript	ENST00000359650.10	protein_coding		1808		chr1	TogoVar
PGM2L1_chr11_74325316_74403433	74389947	C C	CAAAAAAA others(8): Show CAAAAAAAAAAAAAAA	intron_variant intron_variant	MODIFIER	HG02735.hp1 HG02735.hp1	a0004 a0004	a0004c0005 a0004c0005	a0004c0005t0014 a0004c0005t0014	a0004c0005t0014g0121 a0004c0005t0014g0121	1	380	0.0026	15	c.111 others(32): Show c.111+8089_111+8103dupTTTTTTTTTTTTTTT	PGM2L1	ENSG00000165434.8	transcript	ENST00000298198.5	protein_coding	1/13			chr11	TogoVar
PGM2_chr4_37821686_37867937	37841188	G G	GTGTGTGT others(8): Show GTGTGTGTGTGTGTGT	intron_variant intron_variant	MODIFIER	HG00639.hp2 HG01168.hp1 HG01255.hp1 others(16): Show HG00639.hp2 HG01168.hp1 HG01255.hp1 HG01891.hp2 HG02451.hp1 HG02572.hp1 HG02572.hp2 HG02602.hp2 HG02896.hp2 HG03209.hp2 HG03225.hp2 HG03669.hp1 NA18953.hp2 NA18980.hp2 NA18981.hp1 NA18983.hp1 NA18990.hp1 NA19070.hp1 NA19091.hp2	a0001 a0002 a0001 a0002	a0001c0002 a0001c0004 a0002c0003 a0001c0002 a0001c0004 a0002c0003	a0001c0002t0001 a0001c0002t0002 a0001c0002t0003 others(3): Show a0001c0002t0001 a0001c0002t0002 a0001c0002t0003 a0001c0004t0001 a0001c0004t0007 a0002c0003t0003	a0001c0002t0001g0092 a0001c0002t0002g0039 a0001c0002t0002g0066 others(15): Show a0001c0002t0001g0092 a0001c0002t0002g0039 a0001c0002t0002g0066 a0001c0002t0002g0068 a0001c0002t0002g0090 a0001c0002t0002g0093 a0001c0002t0002g0094 a0001c0002t0002g0104 a0001c0002t0002g0109 a0001c0002t0003g0114 a0001c0004t0001g0016 a0001c0004t0001g0089 a0001c0004t0001g0091 a0001c0004t0001g0100 a0001c0004t0001g0257 a0001c0004t0001g0258 a0001c0004t0007g0260 a0002c0003t0003g0035	19	446	0.0426	15	c.719 others(30): Show c.719+929_719+930insTGTGTGTGTGTGTGT	PGM2	ENSG00000169299.14	transcript	ENST00000381967.9	protein_coding	6/13			chr4	TogoVar
PGM3_chr6_83159873_83198265	83191958	C C	CAAAAAAA others(8): Show CAAAAAAAAAAAAAAA	intron_variant intron_variant	MODIFIER	HG04204.hp1 HG04204.hp1	a0002 a0002	a0002c0002 a0002c0002	a0002c0002t0002 a0002c0002t0002	a0002c0002t0002g0149 a0002c0002t0002g0149	1	344	0.0029	15	c.-2- others(28): Show c.-2-959_-2-945dupTTTTTTTTTTTTTTT	PGM3	ENSG00000013375.17	transcript	ENST00000513973.6	protein_coding	1/12			chr6	TogoVar
PGM5_chr9_68351611_68536061	68356436	C C	CACACACA others(8): Show CACACACACACACACA	upstream_gene_variant upstream_gene_variant	MODIFIER	HG00423.hp2 HG00423.hp2	a0004 a0004	a0004c0009 a0004c0009	a0004c0009t0019 a0004c0009t0019	a0004c0009t0019g0246 a0004c0009t0019g0246	1	246	0.0041	15	c.-69 others(24): Show c.-692_-691insACACACACACACACA	PGM5	ENSG00000154330.13	transcript	ENST00000396396.6	protein_coding		174		chr9	TogoVar
PGPEP1L_chr15_98963229_99012792	98987165	C C	CAAAAAAA others(8): Show CAAAAAAAAAAAAAAA	intron_variant intron_variant	MODIFIER	HG02895.hp1 HG02895.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0003 a0001c0001t0003	a0001c0001t0003g0241 a0001c0001t0003g0241	1	398	0.0025	15	c.-14 others(36): Show c.-141-16022_-141-16008dupTTTTTTTTTTTTTTT	PGPEP1L	ENSG00000183571.11	transcript	ENST00000535714.2	protein_coding	2/4			chr15	TogoVar
PGPEP1_chr19_18335598_18374950	18338732	T T	TAAAAAAA others(8): Show TAAAAAAAAAAAAAAA	upstream_gene_variant upstream_gene_variant	MODIFIER	HG01167.hp1 HG01192.hp1 HG01255.hp2 others(16): Show HG01167.hp1 HG01192.hp1 HG01255.hp2 HG01358.hp1 HG01943.hp1 HG02040.hp2 HG02148.hp2 HG02300.hp1 HG03540.hp2 HG03831.hp2 NA18940.hp1 NA18949.hp2 NA18961.hp1 NA18978.hp2 NA18979.hp1 NA18985.hp2 NA18998.hp2 NA19000.hp1 NA19083.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0003 a0001c0001t0016 a0001c0001t0048 others(15): Show a0001c0001t0003 a0001c0001t0016 a0001c0001t0048 a0001c0001t0158 a0001c0001t0259 a0001c0001t0271 a0001c0001t0275 a0001c0001t0277 a0001c0001t0281 a0001c0001t0284 a0001c0001t0291 a0001c0001t0292 a0001c0001t0293 a0001c0001t0306 a0001c0001t0309 a0001c0001t0310 a0001c0001t0316 a0001c0001t0317	a0001c0001t0003g0030 a0001c0001t0003g0352 a0001c0001t0016g0036 others(16): Show a0001c0001t0003g0030 a0001c0001t0003g0352 a0001c0001t0016g0036 a0001c0001t0048g0030 a0001c0001t0158g0025 a0001c0001t0259g0043 a0001c0001t0271g0286 a0001c0001t0275g0311 a0001c0001t0277g0323 a0001c0001t0281g0329 a0001c0001t0284g0350 a0001c0001t0291g0315 a0001c0001t0292g0348 a0001c0001t0293g0312 a0001c0001t0306g0333 a0001c0001t0309g0336 a0001c0001t0310g0346 a0001c0001t0316g0316 a0001c0001t0317g0004	19	412	0.0461	15	c.-19 others(26): Show c.-1950_-1949insAAAAAAAAAAAAAAA	PGPEP1	ENSG00000130517.14	transcript	ENST00000269919.11	protein_coding		1865		chr19	TogoVar
PGPEP1_chr19_18335598_18374950	18344213	G G	GGAAAAGA others(8): Show GGAAAAGATGGCATAT	intron_variant intron_variant	MODIFIER	NA18997.hp1 NA18997.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0002 a0001c0001t0002	a0001c0001t0002g0118 a0001c0001t0002g0118	1	412	0.0024	15	c.87+ others(30): Show c.87+1303_87+1317dupGAAAAGATGGCATAT	PGPEP1	ENSG00000130517.14	transcript	ENST00000269919.11	protein_coding	2/4		INFO_REALIGN_3_PRIME	chr19	TogoVar
PGPEP1_chr19_18335598_18374950	18352266	C C	CAAAAAAA others(8): Show CAAAAAAAAAAAAAAA	intron_variant intron_variant	MODIFIER	HG01361.hp2 HG01934.hp2 HG02486.hp1 others(8): Show HG01361.hp2 HG01934.hp2 HG02486.hp1 HG02572.hp2 HG02602.hp2 HG03098.hp2 HG03195.hp2 HG03669.hp2 NA18943.hp1 NA18949.hp1 NA18999.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0017 a0001c0001t0022 a0001c0001t0026 others(8): Show a0001c0001t0017 a0001c0001t0022 a0001c0001t0026 a0001c0001t0031 a0001c0001t0032 a0001c0001t0038 a0001c0001t0067 a0001c0001t0122 a0001c0001t0138 a0001c0001t0147 a0001c0001t0265	a0001c0001t0017g0240 a0001c0001t0022g0201 a0001c0001t0026g0222 others(8): Show a0001c0001t0017g0240 a0001c0001t0022g0201 a0001c0001t0026g0222 a0001c0001t0031g0159 a0001c0001t0032g0172 a0001c0001t0038g0270 a0001c0001t0067g0221 a0001c0001t0122g0200 a0001c0001t0138g0165 a0001c0001t0147g0171 a0001c0001t0265g0032	11	412	0.0267	15	c.88- others(30): Show c.88-3622_88-3608dupAAAAAAAAAAAAAAA	PGPEP1	ENSG00000130517.14	transcript	ENST00000269919.11	protein_coding	2/4		INFO_REALIGN_3_PRIME	chr19	TogoVar
PGPEP1_chr19_18335598_18374950	18367155	C C	CAAAAAAA others(8): Show CAAAAAAAAAAAAAAA	3_prime_UTR_variant 3_prime_UTR_variant	MODIFIER	NA19043.hp1 NA19043.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0253 a0001c0001t0253	a0001c0001t0253g0356 a0001c0001t0253g0356	1	412	0.0024	15	c.35 others(26): Show c.3578_*3592dupAAAAAAAAAAAAAAA	PGPEP1	ENSG00000130517.14	transcript	ENST00000269919.11	protein_coding	5/5	3593	INFO_REALIGN_3_PRIME	chr19	TogoVar
PGR_chr11_101024624_101134813	101107865	T T	TAAAAAAA others(8): Show TAAAAAAAAAAAAAAA	intron_variant intron_variant	MODIFIER	HG00733.hp1 HG02717.hp2 HG02895.hp2 others(2): Show HG00733.hp1 HG02717.hp2 HG02895.hp2 HG02922.hp2 HG04204.hp1	a0001 a0011 a0001 a0011	a0001c0002 a0011c0009 a0001c0002 a0011c0009	a0001c0002t0022 a0001c0002t0026 a0011c0009t0047 a0001c0002t0022 a0001c0002t0026 a0011c0009t0047	a0001c0002t0022g0043 a0001c0002t0022g0055 a0001c0002t0026g0042 others(2): Show a0001c0002t0022g0043 a0001c0002t0022g0055 a0001c0002t0026g0042 a0001c0002t0026g0044 a0011c0009t0047g0018	5	254	0.0197	15	c.179 others(36): Show c.1790-16004_1790-15990dupTTTTTTTTTTTTTTT	PGR	ENSG00000082175.16	transcript	ENST00000325455.10	protein_coding	2/7			chr11	TogoVar
PGS1_chr17_78373649_78429659	78390062	T T	TCCCCCCG others(8): Show TCCCCCCGCCCCCGCC	intron_variant intron_variant	MODIFIER	HG01256.hp1 NA19072.hp1 HG01256.hp1 NA19072.hp1	a0001 a0001	a0001c0001 a0001c0011 a0001c0001 a0001c0011	a0001c0001t0001 a0001c0011t0002 a0001c0001t0001 a0001c0011t0002	a0001c0001t0001g0266 a0001c0011t0002g0315 a0001c0001t0001g0266 a0001c0011t0002g0315	2	398	0.0050	15	c.144 others(32): Show c.144-2409_144-2408insCGCCCCCGCCCCCCC	PGS1	ENSG00000087157.19	transcript	ENST00000262764.11	protein_coding	1/9		INFO_REALIGN_3_PRIME	chr17	TogoVar
PGS1_chr17_78373649_78429659	78390062	T T	TCCCCCGC others(8): Show TCCCCCGCCCCCCGCC	intron_variant intron_variant	MODIFIER	NA18966.hp2 NA18966.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0324 a0001c0001t0001g0324	1	398	0.0025	15	c.144 others(32): Show c.144-2403_144-2402insCGCCCCCCCGCCCCC	PGS1	ENSG00000087157.19	transcript	ENST00000262764.11	protein_coding	1/9		INFO_REALIGN_3_PRIME	chr17	TogoVar
PGS1_chr17_78373649_78429659	78390062	T T	TCCCCCGC others(8): Show TCCCCCGCCCCCGCCC	intron_variant intron_variant	MODIFIER	HG00140.hp1 HG00423.hp2 HG00735.hp2 others(77): Show HG00140.hp1 HG00423.hp2 HG00735.hp2 HG00738.hp2 HG01081.hp2 HG01106.hp1 HG01123.hp2 HG01175.hp2 HG01346.hp1 HG01361.hp2 HG01516.hp1 HG01516.hp2 HG01517.hp2 HG01891.hp1 HG01952.hp2 HG01975.hp1 HG02004.hp2 HG02055.hp1 HG02056.hp1 HG02056.hp2 HG02080.hp1 HG02109.hp2 HG02132.hp2 HG02145.hp1 HG02148.hp1 HG02273.hp1 HG02486.hp1 HG02559.hp1 HG02602.hp1 HG02602.hp2 HG02622.hp2 HG02698.hp2 HG02717.hp2 HG02735.hp1 HG02738.hp1 HG02818.hp2 HG02886.hp2 HG02970.hp1 HG02970.hp2 HG03130.hp1 HG03130.hp2 HG03195.hp2 HG03239.hp2 HG03471.hp1 HG03540.hp2 HG03579.hp2 HG03688.hp1 HG03834.hp2 HG04199.hp2 NA18522.hp2 NA18944.hp1 NA18947.hp1 NA18947.hp2 NA18948.hp1 NA18950.hp1 NA18951.hp1 NA18964.hp2 NA18966.hp1 NA18967.hp2 NA18973.hp1 NA18982.hp2 NA18990.hp1 NA18999.hp1 NA19003.hp1 NA19007.hp1 NA19054.hp2 NA19066.hp2 NA19080.hp1 NA19080.hp2 NA19082.hp1 NA19082.hp2 NA19083.hp1 NA19083.hp2 NA19085.hp2 NA19088.hp2 NA19090.hp2 NA20300.hp2 NA20752.hp2 NA20805.hp2 NA21309.hp1	a0001 a0001	a0001c0001 a0001c0002 a0001c0003 others(1): Show a0001c0001 a0001c0002 a0001c0003 a0001c0010	a0001c0001t0001 a0001c0001t0002 a0001c0001t0004 others(7): Show a0001c0001t0001 a0001c0001t0002 a0001c0001t0004 a0001c0001t0012 a0001c0002t0003 a0001c0003t0001 a0001c0003t0002 a0001c0003t0008 a0001c0003t0016 a0001c0010t0001	a0001c0001t0001g0002 a0001c0001t0001g0006 a0001c0001t0001g0090 others(73): Show a0001c0001t0001g0002 a0001c0001t0001g0006 a0001c0001t0001g0090 a0001c0001t0001g0091 a0001c0001t0001g0092 a0001c0001t0001g0093 a0001c0001t0001g0100 a0001c0001t0001g0101 a0001c0001t0001g0102 a0001c0001t0001g0103 a0001c0001t0001g0104 a0001c0001t0001g0216 a0001c0001t0001g0226 a0001c0001t0001g0237 a0001c0001t0001g0238 a0001c0001t0001g0239 a0001c0001t0001g0240 a0001c0001t0001g0241 a0001c0001t0001g0242 a0001c0001t0001g0243 a0001c0001t0001g0244 a0001c0001t0001g0248 a0001c0001t0001g0249 a0001c0001t0001g0250 a0001c0001t0001g0252 a0001c0001t0001g0255 a0001c0001t0001g0256 a0001c0001t0001g0258 a0001c0001t0001g0264 a0001c0001t0001g0267 a0001c0001t0001g0271 a0001c0001t0001g0272 a0001c0001t0001g0273 a0001c0001t0001g0279 a0001c0001t0001g0281 a0001c0001t0001g0282 a0001c0001t0001g0283 a0001c0001t0001g0284 a0001c0001t0001g0285 a0001c0001t0001g0286 a0001c0001t0001g0287 a0001c0001t0001g0292 a0001c0001t0001g0294 a0001c0001t0001g0296 a0001c0001t0001g0297 a0001c0001t0001g0302 a0001c0001t0001g0305 a0001c0001t0001g0307 a0001c0001t0001g0308 a0001c0001t0001g0310 a0001c0001t0001g0312 a0001c0001t0001g0317 a0001c0001t0001g0318 a0001c0001t0001g0319 a0001c0001t0001g0320 a0001c0001t0001g0322 a0001c0001t0001g0323 a0001c0001t0001g0325 a0001c0001t0001g0326 a0001c0001t0001g0327 a0001c0001t0002g0014 a0001c0001t0002g0304 a0001c0001t0004g0257 a0001c0001t0012g0002 a0001c0002t0003g0087 a0001c0003t0001g0077 a0001c0003t0002g0024 a0001c0003t0002g0079 a0001c0003t0002g0176 a0001c0003t0002g0179 a0001c0003t0002g0181 a0001c0003t0002g0183 a0001c0003t0002g0184 a0001c0003t0008g0016 a0001c0003t0016g0074 a0001c0010t0001g0227	80	398	0.2010	15	c.144 others(32): Show c.144-2402_144-2401insCCCCCCCCGCCCCCG	PGS1	ENSG00000087157.19	transcript	ENST00000262764.11	protein_coding	1/9		INFO_REALIGN_3_PRIME	chr17	TogoVar
PGS1_chr17_78373649_78429659	78390062	T T	TCCCCCGC others(8): Show TCCCCCGCCCCGCCGC	intron_variant intron_variant	MODIFIER	NA18997.hp1 NA18997.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0289 a0001c0001t0001g0289	1	398	0.0025	15	c.144 others(32): Show c.144-2404_144-2403insGCCGCCCCCCGCCCC	PGS1	ENSG00000087157.19	transcript	ENST00000262764.11	protein_coding	1/9		INFO_REALIGN_3_PRIME	chr17	TogoVar
PGS1_chr17_78373649_78429659	78390067	C C	CGCCCCCG others(8): Show CGCCCCCGCCCCCCCT	intron_variant intron_variant	MODIFIER	HG00609.hp1 HG01109.hp2 HG03927.hp2 others(3): Show HG00609.hp1 HG01109.hp2 HG03927.hp2 NA18939.hp1 NA18954.hp2 NA18989.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0010 a0001c0001t0001 a0001c0001t0010	a0001c0001t0001g0344 a0001c0001t0001g0360 a0001c0001t0001g0361 others(3): Show a0001c0001t0001g0344 a0001c0001t0001g0360 a0001c0001t0001g0361 a0001c0001t0001g0363 a0001c0001t0001g0364 a0001c0001t0010g0352	6	398	0.0151	15	c.144 others(32): Show c.144-2402_144-2401insCCCCCCCTGCCCCCG	PGS1	ENSG00000087157.19	transcript	ENST00000262764.11	protein_coding	1/9		INFO_REALIGN_3_PRIME	chr17	TogoVar
PGS1_chr17_78373649_78429659	78420970	A A	AATGGTGT others(8): Show AATGGTGTTCACAATT	intron_variant intron_variant	MODIFIER	HG02040.hp1 HG02040.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0004 a0001c0001t0004	a0001c0001t0004g0357 a0001c0001t0004g0357	1	398	0.0025	15	c.10 others(32): Show c.10+1296_*10+1310dupATGGTGTTCACAATT	PGS1	ENSG00000087157.19	transcript	ENST00000262764.11	protein_coding	9/9		INFO_REALIGN_3_PRIME	chr17	TogoVar
PHACTR1_chr6_12711767_13292837	12955192	C C	CTTTTTTT others(8): Show CTTTTTTTTTTTTTTT	intron_variant intron_variant	MODIFIER	HG02647.hp2 NA18906.hp1 HG02647.hp2 NA18906.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0018 a0001c0001t0001g0082 a0001c0001t0001g0018 a0001c0001t0001g0082	2	108	0.0185	15	c.251 others(34): Show c.251-98167_251-98153dupTTTTTTTTTTTTTTT	PHACTR1	ENSG00000112137.19	transcript	ENST00000332995.12	protein_coding	4/14		INFO_REALIGN_3_PRIME	chr6	TogoVar
PHACTR1_chr6_12711767_13292837	13177172	T T	TAAAAAAA others(8): Show TAAAAAAAAAAAAAAA	intron_variant intron_variant	MODIFIER	HG02486.hp1 HG02486.hp1	a0001 a0001	a0001c0002 a0001c0002	a0001c0002t0004 a0001c0002t0004	a0001c0002t0004g0108 a0001c0002t0004g0108	1	108	0.0093	15	c.497 others(32): Show c.497-5330_497-5316dupAAAAAAAAAAAAAAA	PHACTR1	ENSG00000112137.19	transcript	ENST00000332995.12	protein_coding	6/14		INFO_REALIGN_3_PRIME	chr6	TogoVar
PHACTR1_chr6_12711767_13292837	13187822	A A	ATGAAATA others(8): Show ATGAAATATGTCAATG	intron_variant intron_variant	MODIFIER	NA20300.hp1 NA20300.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0002 a0001c0001t0002	a0001c0001t0002g0028 a0001c0001t0002g0028	1	108	0.0093	15	c.664 others(32): Show c.664+5136_664+5137insTGAAATATGTCAATG	PHACTR1	ENSG00000112137.19	transcript	ENST00000332995.12	protein_coding	7/14			chr6	TogoVar
PHACTR1_chr6_12711767_13292837	13190198	A A	ATTTTTTT others(8): Show ATTTTTTTTTTTTTTT	intron_variant intron_variant	MODIFIER	HG03209.hp2 HG03209.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0062 a0001c0001t0001g0062	1	108	0.0093	15	c.664 others(32): Show c.664+7514_664+7528dupTTTTTTTTTTTTTTT	PHACTR1	ENSG00000112137.19	transcript	ENST00000332995.12	protein_coding	7/14		INFO_REALIGN_3_PRIME	chr6	TogoVar
PHACTR1_chr6_12711767_13292837	13195757	C C	CAAAAAAA others(8): Show CAAAAAAAAAAAAAAA	intron_variant intron_variant	MODIFIER	NA18946.hp2 NA19240.hp2 NA18946.hp2 NA19240.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0003 a0001c0001t0003	a0001c0001t0003g0048 a0001c0001t0003g0068 a0001c0001t0003g0048 a0001c0001t0003g0068	2	108	0.0185	15	c.665 others(34): Show c.665-10049_665-10035dupAAAAAAAAAAAAAAA	PHACTR1	ENSG00000112137.19	transcript	ENST00000332995.12	protein_coding	7/14		INFO_REALIGN_3_PRIME	chr6	TogoVar
PHACTR1_chr6_12711767_13292837	13218853	A A	AAAGAGAA others(8): Show AAAGAGAAGAGAAGAG	intron_variant intron_variant	MODIFIER	HG03195.hp1 HG03195.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0002 a0001c0001t0002	a0001c0001t0002g0005 a0001c0001t0002g0005	1	108	0.0093	15	c.987 others(32): Show c.987-8915_987-8901dupGAGAAGAGAAGAGAA	PHACTR1	ENSG00000112137.19	transcript	ENST00000332995.12	protein_coding	8/14		INFO_REALIGN_3_PRIME	chr6	TogoVar
PHACTR2_chr6_143672965_143836185	143779899	T T	TTTATATT others(8): Show TTTATATTATATTATA	intron_variant intron_variant	MODIFIER	HG00738.hp1 HG01168.hp1 HG01169.hp1 others(8): Show HG00738.hp1 HG01168.hp1 HG01169.hp1 HG01346.hp1 HG01884.hp1 HG02818.hp1 HG03453.hp2 HG03516.hp1 NA18990.hp1 NA19003.hp2 NA19058.hp1	a0001 a0002 a0001 a0002	a0001c0001 a0001c0003 a0002c0002 a0001c0001 a0001c0003 a0002c0002	a0001c0001t0007 a0001c0001t0104 a0001c0001t0105 others(8): Show a0001c0001t0007 a0001c0001t0104 a0001c0001t0105 a0001c0003t0001 a0001c0003t0002 a0001c0003t0026 a0001c0003t0091 a0001c0003t0116 a0002c0002t0015 a0002c0002t0021 a0002c0002t0125	a0001c0001t0007g0118 a0001c0001t0104g0177 a0001c0001t0105g0186 others(8): Show a0001c0001t0007g0118 a0001c0001t0104g0177 a0001c0001t0105g0186 a0001c0003t0001g0269 a0001c0003t0002g0038 a0001c0003t0026g0025 a0001c0003t0091g0279 a0001c0003t0116g0027 a0002c0002t0015g0046 a0002c0002t0021g0110 a0002c0002t0125g0239	11	310	0.0355	15	c.164 others(34): Show c.1645+2554_1645+2568dupATATTATATTATATT	PHACTR2	ENSG00000112419.15	transcript	ENST00000440869.7	protein_coding	9/12		INFO_REALIGN_3_PRIME	chr6	TogoVar
PHACTR2_chr6_143672965_143836185	143802647	C C	CAAAAAAA others(8): Show CAAAAAAAAAAAAAAA	intron_variant intron_variant	MODIFIER	HG02135.hp2 HG02135.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0123 a0001c0001t0123	a0001c0001t0123g0135 a0001c0001t0123g0135	1	310	0.0032	15	c.184 others(34): Show c.1846-4407_1846-4393dupAAAAAAAAAAAAAAA	PHACTR2	ENSG00000112419.15	transcript	ENST00000440869.7	protein_coding	11/12		INFO_REALIGN_3_PRIME	chr6	TogoVar
PHACTR3_chr20_59599540_59852711	59622981	C C	CAAAAAAA others(8): Show CAAAAAAAAAAAAAAA	intron_variant intron_variant	MODIFIER	HG02965.hp1 HG03942.hp1 HG02965.hp1 HG03942.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0003 a0001c0001t0007 a0001c0001t0003 a0001c0001t0007	a0001c0001t0003g0128 a0001c0001t0007g0118 a0001c0001t0003g0128 a0001c0001t0007g0118	2	250	0.0080	15	c.118 others(34): Show c.118+17855_118+17869dupAAAAAAAAAAAAAAA	PHACTR3	ENSG00000087495.17	transcript	ENST00000371015.6	protein_coding	1/12		INFO_REALIGN_3_PRIME	chr20	TogoVar
PHACTR3_chr20_59599540_59852711	59622990	A A	AAAAAAAC others(8): Show AAAAAAACAAACAAAC	intron_variant intron_variant	MODIFIER	HG02886.hp1 HG03098.hp2 HG02886.hp1 HG03098.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0006 a0001c0001t0006	a0001c0001t0006g0243 a0001c0001t0006g0244 a0001c0001t0006g0243 a0001c0001t0006g0244	2	250	0.0080	15	c.118 others(34): Show c.118+17864_118+17865insCAAACAAACAAAAAA	PHACTR3	ENSG00000087495.17	transcript	ENST00000371015.6	protein_coding	1/12		INFO_REALIGN_3_PRIME	chr20	TogoVar
PHACTR3_chr20_59599540_59852711	59622990	A A	AAACAAAC others(8): Show AAACAAACAAACAAAC	intron_variant intron_variant	MODIFIER	HG02615.hp2 HG02615.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0006 a0001c0001t0006	a0001c0001t0006g0245 a0001c0001t0006g0245	1	250	0.0040	15	c.118 others(34): Show c.118+17860_118+17861insCAAACAAACAAACAA	PHACTR3	ENSG00000087495.17	transcript	ENST00000371015.6	protein_coding	1/12		INFO_REALIGN_3_PRIME	chr20	TogoVar
PHACTR3_chr20_59599540_59852711	59635142	T T	TCTTTTTC others(8): Show TCTTTTTCTTTCTTTC	intron_variant intron_variant	MODIFIER	HG02055.hp2 HG02055.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0037 a0001c0001t0001g0037	1	250	0.0040	15	c.118 others(34): Show c.118+30014_118+30015insTTCTTTCTTTCCTTT	PHACTR3	ENSG00000087495.17	transcript	ENST00000371015.6	protein_coding	1/12		INFO_REALIGN_3_PRIME	chr20	TogoVar
PHACTR3_chr20_59599540_59852711	59635142	T T	TTTCTTTC others(8): Show TTTCTTTCTTTCTTTC	intron_variant intron_variant	MODIFIER	HG03704.hp2 NA18939.hp2 NA18954.hp1 others(2): Show HG03704.hp2 NA18939.hp2 NA18954.hp1 NA18961.hp1 NA18964.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0005 a0001c0001t0001 a0001c0001t0005	a0001c0001t0001g0034 a0001c0001t0001g0082 a0001c0001t0005g0030 others(2): Show a0001c0001t0001g0034 a0001c0001t0001g0082 a0001c0001t0005g0030 a0001c0001t0005g0113 a0001c0001t0005g0169	5	250	0.0200	15	c.118 others(34): Show c.118+30010_118+30011insTTCTTTCTTTCTTTC	PHACTR3	ENSG00000087495.17	transcript	ENST00000371015.6	protein_coding	1/12			chr20	TogoVar
PHACTR3_chr20_59599540_59852711	59635146	T T	TTTCTTTC others(8): Show TTTCTTTCTTTCTTTC	intron_variant intron_variant	MODIFIER	HG01175.hp1 HG04199.hp2 NA19084.hp1 others(1): Show HG01175.hp1 HG04199.hp2 NA19084.hp1 homoSapiens_chm13v2.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0094 a0001c0001t0001g0104 a0001c0001t0001g0105 others(1): Show a0001c0001t0001g0094 a0001c0001t0001g0104 a0001c0001t0001g0105 a0001c0001t0001g0111	4	250	0.0160	15	c.118 others(34): Show c.118+30014_118+30015insTTCTTTCTTTCTTTC	PHACTR3	ENSG00000087495.17	transcript	ENST00000371015.6	protein_coding	1/12			chr20	TogoVar
PHACTR3_chr20_59599540_59852711	59635148	T T	TTTCTTTC others(8): Show TTTCTTTCTTTCTTTC	intron_variant intron_variant	MODIFIER	NA19030.hp1 NA19030.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0003 a0001c0001t0003	a0001c0001t0003g0048 a0001c0001t0003g0048	1	250	0.0040	15	c.118 others(34): Show c.118+30018_118+30019insCTTTCTTTCTTTCTT	PHACTR3	ENSG00000087495.17	transcript	ENST00000371015.6	protein_coding	1/12		INFO_REALIGN_3_PRIME	chr20	TogoVar
PHACTR3_chr20_59599540_59852711	59668870	T T	TTTTTATT others(8): Show TTTTTATTTTATTTTA	intron_variant intron_variant	MODIFIER	HG00735.hp1 HG01081.hp2 HG01106.hp2 others(20): Show HG00735.hp1 HG01081.hp2 HG01106.hp2 HG01168.hp2 HG02004.hp2 HG02886.hp2 HG02965.hp1 HG02965.hp2 HG03195.hp1 HG03239.hp1 HG03579.hp2 HG03831.hp2 HG04115.hp2 HG04199.hp1 HG04204.hp2 NA18945.hp1 NA18951.hp2 NA18961.hp2 NA18962.hp1 NA18981.hp2 NA19064.hp1 NA19084.hp2 NA20905.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0002 a0001c0001t0003 others(5): Show a0001c0001t0001 a0001c0001t0002 a0001c0001t0003 a0001c0001t0004 a0001c0001t0005 a0001c0001t0007 a0001c0001t0012 a0001c0001t0019	a0001c0001t0001g0012 a0001c0001t0001g0019 a0001c0001t0001g0045 others(20): Show a0001c0001t0001g0012 a0001c0001t0001g0019 a0001c0001t0001g0045 a0001c0001t0001g0088 a0001c0001t0001g0140 a0001c0001t0001g0141 a0001c0001t0001g0178 a0001c0001t0001g0181 a0001c0001t0002g0236 a0001c0001t0002g0237 a0001c0001t0003g0128 a0001c0001t0003g0135 a0001c0001t0003g0137 a0001c0001t0003g0179 a0001c0001t0004g0041 a0001c0001t0004g0057 a0001c0001t0005g0056 a0001c0001t0005g0060 a0001c0001t0005g0153 a0001c0001t0007g0089 a0001c0001t0007g0134 a0001c0001t0012g0006 a0001c0001t0019g0242	23	250	0.0920	15	c.118 others(34): Show c.118+63773_118+63787dupATTTTATTTTATTTT	PHACTR3	ENSG00000087495.17	transcript	ENST00000371015.6	protein_coding	1/12		INFO_REALIGN_3_PRIME	chr20	TogoVar
PHACTR3_chr20_59599540_59852711	59674491	T T	TCCCCTTC others(8): Show TCCCCTTCTCCTGTTC	intron_variant intron_variant	MODIFIER	NA18939.hp2 NA18939.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0034 a0001c0001t0001g0034	1	250	0.0040	15	c.119 others(34): Show c.119-68602_119-68588dupTCCCCCTTCTCCTGT	PHACTR3	ENSG00000087495.17	transcript	ENST00000371015.6	protein_coding	1/12		INFO_REALIGN_3_PRIME	chr20	TogoVar
PHACTR3_chr20_59599540_59852711	59674695	G G	GCCTTCTC others(8): Show GCCTTCTCCTGTCCCC	intron_variant intron_variant	MODIFIER	HG00408.hp1 NA18939.hp1 NA18986.hp1 HG00408.hp1 NA18939.hp1 NA18986.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0002 a0001c0001t0008 a0001c0001t0002 a0001c0001t0008	a0001c0001t0002g0071 a0001c0001t0002g0157 a0001c0001t0008g0158 a0001c0001t0002g0071 a0001c0001t0002g0157 a0001c0001t0008g0158	3	250	0.0120	15	c.119 others(34): Show c.119-68400_119-68386dupCCCCCCTTCTCCTGT	PHACTR3	ENSG00000087495.17	transcript	ENST00000371015.6	protein_coding	1/12		INFO_REALIGN_3_PRIME	chr20	TogoVar
PHACTR3_chr20_59599540_59852711	59674707	C C	CCCCCCTT others(8): Show CCCCCCTTCTGCTGTT	intron_variant intron_variant	MODIFIER	NA18906.hp1 NA18906.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0003 a0001c0001t0003	a0001c0001t0003g0127 a0001c0001t0003g0127	1	250	0.0040	15	c.119 others(34): Show c.119-68391_119-68390insGCTGTTCCCCCTTCT	PHACTR3	ENSG00000087495.17	transcript	ENST00000371015.6	protein_coding	1/12		INFO_REALIGN_3_PRIME	chr20	TogoVar
PHACTR3_chr20_59599540_59852711	59674805	A A	ACCTTCTC others(8): Show ACCTTCTCCTGTTCCC	intron_variant intron_variant	MODIFIER	HG00544.hp1 HG00597.hp1 HG00609.hp1 others(87): Show HG00544.hp1 HG00597.hp1 HG00609.hp1 HG00621.hp2 HG00639.hp2 HG00735.hp2 HG00741.hp2 HG01106.hp1 HG01168.hp1 HG01175.hp2 HG01243.hp2 HG01255.hp2 HG01256.hp2 HG01257.hp1 HG01258.hp2 HG01261.hp1 HG01361.hp2 HG01496.hp2 HG01884.hp1 HG01884.hp2 HG01928.hp2 HG01975.hp1 HG01978.hp2 HG01993.hp2 HG02015.hp1 HG02015.hp2 HG02040.hp1 HG02040.hp2 HG02055.hp2 HG02071.hp1 HG02074.hp2 HG02132.hp1 HG02132.hp2 HG02165.hp1 HG02165.hp2 HG02300.hp1 HG02300.hp2 HG02572.hp1 HG02615.hp2 HG02622.hp1 HG02647.hp2 HG02683.hp1 HG02683.hp2 HG02698.hp2 HG02723.hp2 HG02738.hp1 HG02738.hp2 HG02809.hp1 HG02886.hp1 HG02922.hp1 HG02965.hp2 HG03098.hp1 HG03139.hp1 HG03209.hp1 HG03516.hp2 HG04199.hp2 HG04228.hp1 HG06807.hp2 NA18906.hp1 NA18906.hp2 NA18942.hp1 NA18945.hp2 NA18948.hp1 NA18951.hp1 NA18954.hp2 NA18956.hp1 NA18956.hp2 NA18964.hp1 NA18970.hp2 NA18971.hp2 NA18975.hp1 NA18975.hp2 NA18981.hp1 NA18983.hp1 NA18983.hp2 NA18988.hp1 NA18995.hp1 NA19005.hp1 NA19012.hp1 NA19012.hp2 NA19030.hp2 NA19058.hp1 NA19065.hp2 NA19066.hp1 NA19066.hp2 NA19074.hp2 NA19090.hp1 NA19240.hp1 NA20905.hp1 homoSapiens_chm13v2.hp1	a0001 a0002 a0003 others(2): Show a0001 a0002 a0003 a0004 a0005	a0001c0001 a0001c0003 a0001c0005 others(4): Show a0001c0001 a0001c0003 a0001c0005 a0002c0002 a0003c0004 a0004c0008 a0005c0006	a0001c0001t0001 a0001c0001t0002 a0001c0001t0003 others(19): Show a0001c0001t0001 a0001c0001t0002 a0001c0001t0003 a0001c0001t0004 a0001c0001t0005 a0001c0001t0006 a0001c0001t0007 a0001c0001t0008 a0001c0001t0009 a0001c0001t0011 a0001c0001t0012 a0001c0001t0013 a0001c0001t0015 a0001c0001t0016 a0001c0003t0007 a0001c0003t0018 a0001c0005t0003 a0002c0002t0003 a0002c0002t0008 a0003c0004t0001 a0004c0008t0020 a0005c0006t0001	a0001c0001t0001g0001 a0001c0001t0001g0014 a0001c0001t0001g0025 others(86): Show a0001c0001t0001g0001 a0001c0001t0001g0014 a0001c0001t0001g0025 a0001c0001t0001g0037 a0001c0001t0001g0040 a0001c0001t0001g0054 a0001c0001t0001g0063 a0001c0001t0001g0076 a0001c0001t0001g0077 a0001c0001t0001g0085 a0001c0001t0001g0094 a0001c0001t0001g0100 a0001c0001t0001g0103 a0001c0001t0001g0105 a0001c0001t0001g0117 a0001c0001t0001g0121 a0001c0001t0001g0131 a0001c0001t0001g0132 a0001c0001t0001g0138 a0001c0001t0001g0139 a0001c0001t0001g0142 a0001c0001t0001g0145 a0001c0001t0001g0146 a0001c0001t0001g0167 a0001c0001t0001g0170 a0001c0001t0001g0176 a0001c0001t0001g0202 a0001c0001t0001g0203 a0001c0001t0001g0204 a0001c0001t0001g0205 a0001c0001t0001g0206 a0001c0001t0001g0216 a0001c0001t0001g0239 a0001c0001t0002g0070 a0001c0001t0002g0072 a0001c0001t0002g0210 a0001c0001t0002g0211 a0001c0001t0002g0213 a0001c0001t0002g0215 a0001c0001t0002g0217 a0001c0001t0002g0218 a0001c0001t0002g0224 a0001c0001t0002g0226 a0001c0001t0002g0227 a0001c0001t0002g0228 a0001c0001t0002g0230 a0001c0001t0002g0231 a0001c0001t0002g0232 a0001c0001t0002g0233 a0001c0001t0002g0234 a0001c0001t0002g0238 a0001c0001t0002g0240 a0001c0001t0003g0091 a0001c0001t0003g0092 a0001c0001t0003g0108 a0001c0001t0003g0110 a0001c0001t0003g0127 a0001c0001t0003g0129 a0001c0001t0004g0004 a0001c0001t0004g0005 a0001c0001t0004g0052 a0001c0001t0004g0133 a0001c0001t0004g0184 a0001c0001t0004g0186 a0001c0001t0005g0168 a0001c0001t0005g0169 a0001c0001t0006g0022 a0001c0001t0006g0067 a0001c0001t0006g0069 a0001c0001t0006g0073 a0001c0001t0006g0244 a0001c0001t0006g0245 a0001c0001t0007g0114 a0001c0001t0008g0209 a0001c0001t0009g0159 a0001c0001t0009g0214 a0001c0001t0011g0021 a0001c0001t0012g0006 a0001c0001t0013g0029 a0001c0001t0015g0241 a0001c0001t0016g0068 a0001c0003t0007g0087 a0001c0003t0018g0065 a0001c0005t0003g0035 a0002c0002t0003g0059 a0002c0002t0008g0225 a0003c0004t0001g0248 a0004c0008t0020g0144 a0005c0006t0001g0151	90	250	0.3600	15	c.119 others(34): Show c.119-68291_119-68290insTCCCCCTTCTCCTGT	PHACTR3	ENSG00000087495.17	transcript	ENST00000371015.6	protein_coding	1/12		INFO_REALIGN_3_PRIME	chr20	TogoVar
PHACTR3_chr20_59599540_59852711	59822153	G G	GCGATCCG others(8): Show GCGATCCGCCCCCCAA	intron_variant intron_variant	MODIFIER	HG00738.hp2 HG00738.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0004 a0001c0001t0004	a0001c0001t0004g0148 a0001c0001t0004g0148	1	250	0.0040	15	c.132 others(36): Show c.1329-14346_1329-14345insGCCCCCCAACGATCC	PHACTR3	ENSG00000087495.17	transcript	ENST00000371015.6	protein_coding	8/12		INFO_REALIGN_3_PRIME	chr20	TogoVar
PHACTR4_chr1_28364740_28505364	28378198	T T	TAAAAAAA others(8): Show TAAAAAAAAAAAAAAA	intron_variant intron_variant	MODIFIER	HG02970.hp2 HG03471.hp2 HG02970.hp2 HG03471.hp2	a0002 a0002	a0002c0002 a0002c0002	a0002c0002t0037 a0002c0002t0039 a0002c0002t0037 a0002c0002t0039	a0002c0002t0037g0150 a0002c0002t0039g0151 a0002c0002t0037g0150 a0002c0002t0039g0151	2	228	0.0088	15	c.-39 others(32): Show c.-39+8377_-39+8391dupAAAAAAAAAAAAAAA	PHACTR4	ENSG00000204138.13	transcript	ENST00000373839.8	protein_coding	1/13		INFO_REALIGN_3_PRIME	chr1	TogoVar
PHACTR4_chr1_28364740_28505364	28450974	C C	CTTTTTTT others(8): Show CTTTTTTTTTTTTTTT	intron_variant intron_variant	MODIFIER	HG00639.hp2 HG00639.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0011 a0001c0001t0011	a0001c0001t0011g0095 a0001c0001t0011g0095	1	228	0.0044	15	c.17- others(30): Show c.17-8105_17-8091dupTTTTTTTTTTTTTTT	PHACTR4	ENSG00000204138.13	transcript	ENST00000373839.8	protein_coding	2/13		INFO_REALIGN_3_PRIME	chr1	TogoVar
PHACTR4_chr1_28364740_28505364	28476772	C C	CTTTTTTT others(8): Show CTTTTTTTTTTTTTTT	intron_variant intron_variant	MODIFIER	HG00140.hp2 HG00280.hp2 HG00323.hp1 others(39): Show HG00140.hp2 HG00280.hp2 HG00323.hp1 HG00733.hp2 HG00738.hp2 HG01070.hp2 HG01106.hp2 HG01192.hp2 HG01243.hp1 HG01243.hp2 HG01358.hp1 HG01515.hp2 HG01516.hp2 HG01517.hp2 HG01952.hp1 HG02145.hp1 HG02145.hp2 HG02148.hp1 HG02258.hp1 HG02300.hp2 HG02451.hp2 HG02486.hp2 HG02683.hp2 HG02735.hp2 HG02809.hp1 HG02895.hp2 HG02922.hp1 HG03041.hp1 HG03139.hp2 HG03195.hp2 HG03239.hp2 HG03540.hp2 HG03669.hp2 HG03688.hp2 HG03704.hp1 HG03710.hp2 HG03831.hp2 NA18986.hp1 NA19030.hp1 NA20805.hp2 NA21309.hp1 NA21309.hp2	a0001 a0002 a0003 a0001 a0002 a0003	a0001c0003 a0001c0005 a0002c0002 others(1): Show a0001c0003 a0001c0005 a0002c0002 a0003c0011	a0001c0003t0004 a0001c0005t0008 a0002c0002t0002 others(11): Show a0001c0003t0004 a0001c0005t0008 a0002c0002t0002 a0002c0002t0003 a0002c0002t0007 a0002c0002t0012 a0002c0002t0015 a0002c0002t0016 a0002c0002t0017 a0002c0002t0026 a0002c0002t0027 a0002c0002t0029 a0002c0002t0032 a0003c0011t0002	a0001c0003t0004g0128 a0001c0005t0008g0091 a0002c0002t0002g0142 others(39): Show a0001c0003t0004g0128 a0001c0005t0008g0091 a0002c0002t0002g0142 a0002c0002t0002g0156 a0002c0002t0002g0157 a0002c0002t0002g0166 a0002c0002t0002g0167 a0002c0002t0002g0169 a0002c0002t0002g0178 a0002c0002t0002g0185 a0002c0002t0002g0191 a0002c0002t0002g0194 a0002c0002t0002g0198 a0002c0002t0002g0199 a0002c0002t0002g0213 a0002c0002t0002g0214 a0002c0002t0002g0215 a0002c0002t0002g0217 a0002c0002t0002g0218 a0002c0002t0003g0144 a0002c0002t0003g0165 a0002c0002t0003g0171 a0002c0002t0003g0174 a0002c0002t0003g0176 a0002c0002t0003g0177 a0002c0002t0003g0186 a0002c0002t0003g0201 a0002c0002t0003g0203 a0002c0002t0003g0228 a0002c0002t0007g0123 a0002c0002t0007g0124 a0002c0002t0012g0216 a0002c0002t0015g0159 a0002c0002t0016g0190 a0002c0002t0016g0200 a0002c0002t0017g0184 a0002c0002t0017g0188 a0002c0002t0026g0209 a0002c0002t0027g0202 a0002c0002t0029g0168 a0002c0002t0032g0024 a0003c0011t0002g0147	42	228	0.1842	15	c.160 others(32): Show c.1606+482_1606+496dupTTTTTTTTTTTTTTT	PHACTR4	ENSG00000204138.13	transcript	ENST00000373839.8	protein_coding	8/13		INFO_REALIGN_3_PRIME	chr1	TogoVar
PHACTR4_chr1_28364740_28505364	28499462	A A	ATTTGTTT others(8): Show ATTTGTTTTGTTTTGT	3_prime_UTR_variant 3_prime_UTR_variant	MODIFIER	HG00280.hp2 HG02258.hp2 HG00280.hp2 HG02258.hp2	a0001 a0002 a0001 a0002	a0001c0003 a0002c0002 a0001c0003 a0002c0002	a0001c0003t0035 a0002c0002t0032 a0001c0003t0035 a0002c0002t0032	a0001c0003t0035g0134 a0002c0002t0032g0024 a0001c0003t0035g0134 a0002c0002t0032g0024	2	228	0.0088	15	c.29 others(26): Show c.2932_*2946dupGTTTTGTTTTGTTTT	PHACTR4	ENSG00000204138.13	transcript	ENST00000373839.8	protein_coding	14/14	2947	INFO_REALIGN_3_PRIME	chr1	TogoVar
PHAF1_chr16_67104941_67153544	67107249	C C	CGTGTGTG others(8): Show CGTGTGTGTGTGTGGT	upstream_gene_variant upstream_gene_variant	MODIFIER	HG02559.hp1 HG02717.hp1 HG02970.hp2 others(1): Show HG02559.hp1 HG02717.hp1 HG02970.hp2 NA19043.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0009 a0001c0001t0001g0143 a0001c0001t0001g0144 a0001c0001t0001g0009 a0001c0001t0001g0143 a0001c0001t0001g0144	4	230	0.0174	15	c.-29 others(26): Show c.-2927_-2926insGTGTGTGTGTGTGGT	PHAF1	ENSG00000125149.12	transcript	ENST00000219139.8	protein_coding		2691		chr16	TogoVar
PHAF1_chr16_67104941_67153544	67108679	T T	TATCTATC others(8): Show TATCTATCTATCTATC	upstream_gene_variant upstream_gene_variant	MODIFIER	HG06807.hp2 HG06807.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0209 a0001c0001t0001g0209	1	230	0.0044	15	c.-14 others(26): Show c.-1497_-1496insATCTATCTATCTATC	PHAF1	ENSG00000125149.12	transcript	ENST00000219139.8	protein_coding		1261		chr16	TogoVar
PHAX_chr5_126595947_126632252	126609095	A A	ATTTTTTT others(8): Show ATTTTTTTTTTTTTTT	intron_variant intron_variant	MODIFIER	NA18956.hp2 NA18956.hp2	a0002 a0002	a0002c0002 a0002c0002	a0002c0002t0002 a0002c0002t0002	a0002c0002t0002g0118 a0002c0002t0002g0118	1	382	0.0026	15	c.831 others(30): Show c.831+620_831+634dupTTTTTTTTTTTTTTT	PHAX	ENSG00000164902.14	transcript	ENST00000297540.5	protein_coding	3/4		INFO_REALIGN_3_PRIME	chr5	TogoVar
PHC1_chr12_8909509_8946467	8927914	T T	TTTCTTTC others(8): Show TTTCTTTCTTTCTTTC	intron_variant intron_variant	MODIFIER	HG01106.hp1 HG01106.hp1	a0002 a0002	a0002c0001 a0002c0001	a0002c0001t0002 a0002c0001t0002	a0002c0001t0002g0109 a0002c0001t0002g0109	1	368	0.0027	15	c.613 others(32): Show c.613-2519_613-2518insCTTTCTTTCTTTCTT	PHC1	ENSG00000111752.11	transcript	ENST00000544916.6	protein_coding	6/14		INFO_REALIGN_3_PRIME	chr12	TogoVar
PHC3_chr3_170082584_170186733	170111352	G G	GAAAGGGA others(8): Show GAAAGGGAAGGAAGGA	intron_variant intron_variant	MODIFIER	HG01934.hp1 HG01934.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0003 a0001c0001t0003	a0001c0001t0003g0263 a0001c0001t0003g0263	1	332	0.0030	15	c.235 others(34): Show c.2353+1993_2353+2007dupTCCTTCCTTCCCTTT	PHC3	ENSG00000173889.16	transcript	ENST00000495893.7	protein_coding	11/14			chr3	TogoVar
PHEX_chrX_22027325_22256310	22185756	G G	GTTTTTTT others(8): Show GTTTTTTTTTTTTTTT	intron_variant intron_variant	MODIFIER	HG01496.hp2 HG02615.hp1 HG02615.hp2 others(2): Show HG01496.hp2 HG02615.hp1 HG02615.hp2 HG03516.hp1 NA19030.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0020 a0001c0001t0050 a0001c0001t0104 others(2): Show a0001c0001t0020 a0001c0001t0050 a0001c0001t0104 a0001c0001t0144 a0001c0001t0151	a0001c0001t0020g0040 a0001c0001t0050g0128 a0001c0001t0104g0074 others(2): Show a0001c0001t0020g0040 a0001c0001t0050g0128 a0001c0001t0104g0074 a0001c0001t0144g0028 a0001c0001t0151g0026	5	231	0.0217	15	c.158 others(34): Show c.1587-4685_1587-4671dupTTTTTTTTTTTTTTT	PHEX	ENSG00000102174.10	transcript	ENST00000379374.5	protein_coding	14/21		INFO_REALIGN_3_PRIME	chrX	TogoVar
PHEX_chrX_22027325_22256310	22249455	A A	AAATATAT others(8): Show AAATATATATATATAT	3_prime_UTR_variant 3_prime_UTR_variant	MODIFIER	HG01099.hp1 HG01099.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0053 a0001c0001t0053	a0001c0001t0053g0205 a0001c0001t0053g0205	1	231	0.0043	15	c.15 others(26): Show c.1503_*1504insATATATATATATATA	PHEX	ENSG00000102174.10	transcript	ENST00000379374.5	protein_coding	22/22	1504	INFO_REALIGN_3_PRIME	chrX	TogoVar

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