Joint Open Genome and Omics Platform (JoGo)

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Snpeff annotation impact detail

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regionname	pos	ref	alt	annotation	impact	samples	ahapids	chapids	thapids	thapids	ac	an	af	len	hgvs_c	genename	geneid	featuretype	featureid	transcript_biotype	rank	distance	status	chr	external
PTPRG_chr3_61556571_62302609	61871108	C C	CTGTTATG others(8): Show CTGTTATGTTATGTTA	intron_variant intron_variant	MODIFIER	HG00738.hp1 HG00738.hp1	a0002 a0002	a0002c0002 a0002c0002	a0002c0002t0002 a0002c0002t0002	a0002c0002t0002g0021 a0002c0002t0002g0021	1	94	0.0106	15	c.191 others(36): Show c.191-118507_191-118493dupATGTTATGTTATGTT	PTPRG	ENSG00000144724.20	transcript	ENST00000474889.6	protein_coding	2/29		INFO_REALIGN_3_PRIME	chr3	TogoVar
PTPRG_chr3_61556571_62302609	61887170	A A	ATATTTTT others(8): Show ATATTTTTTTTTTTTT	intron_variant intron_variant	MODIFIER	HG03471.hp2 HG03471.hp2	a0004 a0004	a0004c0006 a0004c0006	a0004c0006t0002 a0004c0006t0002	a0004c0006t0002g0094 a0004c0006t0002g0094	1	94	0.0106	15	c.191 others(36): Show c.191-102454_191-102453insATTTTTTTTTTTTTT	PTPRG	ENSG00000144724.20	transcript	ENST00000474889.6	protein_coding	2/29		INFO_REALIGN_3_PRIME	chr3	TogoVar
PTPRG_chr3_61556571_62302609	62026879	T T	TAAAAAAA others(8): Show TAAAAAAAAAAAAAAA	intron_variant intron_variant	MODIFIER	HG03098.hp1 NA19030.hp1 HG03098.hp1 NA19030.hp1	a0001 a0008 a0001 a0008	a0001c0001 a0008c0009 a0001c0001 a0008c0009	a0001c0001t0010 a0008c0009t0002 a0001c0001t0010 a0008c0009t0002	a0001c0001t0010g0087 a0008c0009t0002g0032 a0001c0001t0010g0087 a0008c0009t0002g0032	2	94	0.0213	15	c.519 others(34): Show c.519+23383_519+23397dupAAAAAAAAAAAAAAA	PTPRG	ENSG00000144724.20	transcript	ENST00000474889.6	protein_coding	4/29		INFO_REALIGN_3_PRIME	chr3	TogoVar
PTPRG_chr3_61556571_62302609	62206933	A A	AAAAACAA others(8): Show AAAAACAAAAAAAAAC	intron_variant intron_variant	MODIFIER	HG02976.hp2 HG02976.hp2	a0002 a0002	a0002c0002 a0002c0002	a0002c0002t0001 a0002c0002t0001	a0002c0002t0001g0041 a0002c0002t0001g0041	1	94	0.0106	15	c.215 others(34): Show c.2155+2987_2155+2988insCAAAAAAAAACAAAA	PTPRG	ENSG00000144724.20	transcript	ENST00000474889.6	protein_coding	12/29		INFO_REALIGN_3_PRIME	chr3	TogoVar
PTPRG_chr3_61556571_62302609	62281538	C C	CTTTTTTT others(8): Show CTTTTTTTTTTTTTTT	intron_variant intron_variant	MODIFIER	HG02970.hp1 HG02970.hp1	a0002 a0002	a0002c0002 a0002c0002	a0002c0002t0001 a0002c0002t0001	a0002c0002t0001g0064 a0002c0002t0001g0064	1	94	0.0106	15	c.376 others(30): Show c.3766-12_3766-11insTTTTTTTTTTTTTTT	PTPRG	ENSG00000144724.20	transcript	ENST00000474889.6	protein_coding	26/29		INFO_REALIGN_3_PRIME	chr3	TogoVar
PTPRH_chr19_55176247_55214501	55184805	T T	TAATAAAA others(8): Show TAATAAAATAAAATAA	intron_variant intron_variant	MODIFIER	HG02451.hp1 HG02615.hp1 HG02630.hp2 others(3): Show HG02451.hp1 HG02615.hp1 HG02630.hp2 HG02970.hp1 HG03139.hp1 HG03225.hp1	a0002 a0004 a0010 others(1): Show a0002 a0004 a0010 a0033	a0002c0002 a0004c0111 a0010c0032 others(3): Show a0002c0002 a0004c0111 a0010c0032 a0010c0036 a0010c0058 a0033c0117	a0002c0002t0001 a0004c0111t0001 a0010c0032t0001 others(3): Show a0002c0002t0001 a0004c0111t0001 a0010c0032t0001 a0010c0036t0005 a0010c0058t0005 a0033c0117t0001	a0002c0002t0001g0315 a0004c0111t0001g0153 a0010c0032t0001g0118 others(3): Show a0002c0002t0001g0315 a0004c0111t0001g0153 a0010c0032t0001g0118 a0010c0036t0005g0034 a0010c0058t0005g0127 a0033c0117t0001g0143	6	378	0.0159	15	c.306 others(32): Show c.3062+682_3062+696dupTTATTTTATTTTATT	PTPRH	ENSG00000080031.10	transcript	ENST00000376350.8	protein_coding	18/19			chr19	TogoVar
PTPRJ_chr11_47975559_48175839	48046913	T T	TATATATA others(8): Show TATATATATATATATA	intron_variant intron_variant	MODIFIER	HG03041.hp1 HG03041.hp1	a0001 a0001	a0001c0006 a0001c0006	a0001c0006t0038 a0001c0006t0038	a0001c0006t0038g0213 a0001c0006t0038g0213	1	216	0.0046	15	c.97- others(32): Show c.97-63145_97-63144insATATATATATATATA	PTPRJ	ENSG00000149177.15	transcript	ENST00000418331.7	protein_coding	1/24			chr11	TogoVar
PTPRJ_chr11_47975559_48175839	48049515	T T	TAAAACAA others(8): Show TAAAACAAAACAAAAC	intron_variant intron_variant	MODIFIER	HG01257.hp2 HG01258.hp2 HG01257.hp2 HG01258.hp2	a0001 a0001	a0001c0004 a0001c0004	a0001c0004t0032 a0001c0004t0032	a0001c0004t0032g0053 a0001c0004t0032g0058 a0001c0004t0032g0053 a0001c0004t0032g0058	2	216	0.0093	15	c.97- others(32): Show c.97-60505_97-60491dupAACAAAACAAAACAA	PTPRJ	ENSG00000149177.15	transcript	ENST00000418331.7	protein_coding	1/24		INFO_REALIGN_3_PRIME	chr11	TogoVar
PTPRJ_chr11_47975559_48175839	48049557	A A	AAACAAAA others(8): Show AAACAAAACAAAACAC	intron_variant intron_variant	MODIFIER	HG02976.hp1 HG02976.hp1	a0001 a0001	a0001c0029 a0001c0029	a0001c0029t0040 a0001c0029t0040	a0001c0029t0040g0020 a0001c0029t0040g0020	1	216	0.0046	15	c.97- others(32): Show c.97-60491_97-60490insAACACAACAAAACAA	PTPRJ	ENSG00000149177.15	transcript	ENST00000418331.7	protein_coding	1/24		INFO_REALIGN_3_PRIME	chr11	TogoVar
PTPRK_chr6_127963785_128525599	127964910	A A	ATGGACTT others(8): Show ATGGACTTTGCCTATC	downstream_gene_variant downstream_gene_variant	MODIFIER	HG00280.hp2 HG00639.hp1 HG00639.hp2 others(46): Show HG00280.hp2 HG00639.hp1 HG00639.hp2 HG01175.hp1 HG01175.hp2 HG01192.hp1 HG01192.hp2 HG01261.hp1 HG01261.hp2 HG02145.hp1 HG02145.hp2 HG02257.hp1 HG02257.hp2 HG02486.hp1 HG02486.hp2 HG02559.hp1 HG02559.hp2 HG02572.hp1 HG02572.hp2 HG02647.hp1 HG02647.hp2 HG02723.hp1 HG02723.hp2 HG02735.hp1 HG02735.hp2 HG02922.hp1 HG02922.hp2 HG03139.hp1 HG03139.hp2 HG03195.hp1 HG03195.hp2 HG03209.hp1 HG03209.hp2 HG03225.hp1 HG03225.hp2 HG03471.hp1 HG03471.hp2 HG03942.hp1 NA18906.hp1 NA18906.hp2 NA18959.hp2 NA18970.hp1 NA19043.hp1 NA19043.hp2 NA20300.hp1 NA20300.hp2 NA21309.hp1 NA21309.hp2 homoSapiens_chm13v2.hp1	a0001 a0002 a0001 a0002	a0001c0001 a0001c0002 a0001c0003 others(10): Show a0001c0001 a0001c0002 a0001c0003 a0001c0004 a0001c0005 a0001c0006 a0001c0007 a0001c0009 a0001c0010 a0001c0011 a0001c0013 a0001c0014 a0002c0008	a0001c0001t0001 a0001c0001t0008 a0001c0002t0001 others(18): Show a0001c0001t0001 a0001c0001t0008 a0001c0002t0001 a0001c0002t0002 a0001c0003t0001 a0001c0003t0002 a0001c0003t0004 a0001c0004t0001 a0001c0004t0002 a0001c0004t0005 a0001c0005t0001 a0001c0005t0003 a0001c0006t0001 a0001c0007t0001 a0001c0007t0006 a0001c0009t0001 a0001c0010t0001 a0001c0011t0001 a0001c0013t0002 a0001c0014t0007 a0002c0008t0001	a0001c0001t0001g0003 a0001c0001t0001g0004 a0001c0001t0001g0007 others(46): Show a0001c0001t0001g0003 a0001c0001t0001g0004 a0001c0001t0001g0007 a0001c0001t0001g0008 a0001c0001t0001g0009 a0001c0001t0001g0016 a0001c0001t0001g0018 a0001c0001t0001g0021 a0001c0001t0001g0023 a0001c0001t0001g0027 a0001c0001t0001g0030 a0001c0001t0001g0033 a0001c0001t0001g0034 a0001c0001t0001g0038 a0001c0001t0001g0039 a0001c0001t0001g0040 a0001c0001t0001g0041 a0001c0001t0001g0042 a0001c0001t0001g0046 a0001c0001t0001g0051 a0001c0001t0008g0011 a0001c0002t0001g0013 a0001c0002t0001g0037 a0001c0002t0001g0048 a0001c0002t0002g0025 a0001c0003t0001g0024 a0001c0003t0001g0035 a0001c0003t0002g0029 a0001c0003t0002g0032 a0001c0003t0004g0052 a0001c0003t0004g0053 a0001c0004t0001g0006 a0001c0004t0001g0017 a0001c0004t0002g0010 a0001c0004t0002g0022 a0001c0004t0005g0002 a0001c0005t0001g0014 a0001c0005t0001g0019 a0001c0005t0003g0028 a0001c0005t0003g0036 a0001c0006t0001g0031 a0001c0007t0001g0047 a0001c0007t0006g0001 a0001c0009t0001g0015 a0001c0010t0001g0044 a0001c0011t0001g0043 a0001c0013t0002g0045 a0001c0014t0007g0005 a0002c0008t0001g0020	49	53	0.9245	15	c.53 others(26): Show c.5316_*5317insGATAGGCAAAGTCCA	PTPRK	ENSG00000152894.15	transcript	ENST00000368226.9	protein_coding		3874		chr6	TogoVar
PTPRK_chr6_127963785_128525599	128214544	C C	CATTATTA others(8): Show CATTATTATTATTATT	intron_variant intron_variant	MODIFIER	HG00280.hp1 HG01261.hp2 HG02647.hp2 others(3): Show HG00280.hp1 HG01261.hp2 HG02647.hp2 HG02723.hp2 HG02922.hp2 HG03209.hp1	a0001 a0001	a0001c0001 a0001c0005 a0001c0007 others(1): Show a0001c0001 a0001c0005 a0001c0007 a0001c0012	a0001c0001t0001 a0001c0005t0003 a0001c0007t0006 others(1): Show a0001c0001t0001 a0001c0005t0003 a0001c0007t0006 a0001c0012t0001	a0001c0001t0001g0021 a0001c0001t0001g0040 a0001c0005t0003g0028 others(3): Show a0001c0001t0001g0021 a0001c0001t0001g0040 a0001c0005t0003g0028 a0001c0005t0003g0036 a0001c0007t0006g0001 a0001c0012t0001g0049	6	53	0.1132	15	c.868 others(32): Show c.868+4363_868+4377dupAATAATAATAATAAT	PTPRK	ENSG00000152894.15	transcript	ENST00000368226.9	protein_coding	6/29			chr6	TogoVar
PTPRK_chr6_127963785_128525599	128354231	G G	GTTTTTTT others(8): Show GTTTTTTTTTTTTTTT	intron_variant intron_variant	MODIFIER	HG03209.hp1 HG03209.hp1	a0001 a0001	a0001c0007 a0001c0007	a0001c0007t0006 a0001c0007t0006	a0001c0007t0006g0001 a0001c0007t0006g0001	1	53	0.0189	15	c.224 others(34): Show c.224-31936_224-31922dupAAAAAAAAAAAAAAA	PTPRK	ENSG00000152894.15	transcript	ENST00000368226.9	protein_coding	2/29			chr6	TogoVar
PTPRM_chr18_7562316_8411856	7772244	T T	TTTTTCTT others(8): Show TTTTTCTTTTCTTTTC	intron_variant intron_variant	MODIFIER	HG01106.hp2 HG02630.hp1 HG03453.hp2 others(1): Show HG01106.hp2 HG02630.hp1 HG03453.hp2 HG03471.hp1	a0001 a0001	a0001c0001 a0001c0008 a0001c0012 others(1): Show a0001c0001 a0001c0008 a0001c0012 a0001c0019	a0001c0001t0002 a0001c0008t0001 a0001c0012t0002 others(1): Show a0001c0001t0002 a0001c0008t0001 a0001c0012t0002 a0001c0019t0001	a0001c0001t0002g0037 a0001c0008t0001g0080 a0001c0012t0002g0035 others(1): Show a0001c0001t0002g0037 a0001c0008t0001g0080 a0001c0012t0002g0035 a0001c0019t0001g0006	4	80	0.0500	15	c.74- others(30): Show c.74-1876_74-1862dupTCTTTTCTTTTCTTT	PTPRM	ENSG00000173482.17	transcript	ENST00000580170.6	protein_coding	1/32		INFO_REALIGN_3_PRIME	chr18	TogoVar
PTPRM_chr18_7562316_8411856	7958207	C C	CAAAAAAA others(8): Show CAAAAAAAAAAAAAAA	intron_variant intron_variant	MODIFIER	HG02723.hp1 HG02723.hp1	a0002 a0002	a0002c0010 a0002c0010	a0002c0010t0001 a0002c0010t0001	a0002c0010t0001g0047 a0002c0010t0001g0047	1	80	0.0125	15	c.113 others(34): Show c.1132+2798_1132+2812dupAAAAAAAAAAAAAAA	PTPRM	ENSG00000173482.17	transcript	ENST00000580170.6	protein_coding	7/32		INFO_REALIGN_3_PRIME	chr18	TogoVar
PTPRM_chr18_7562316_8411856	8126027	A A	ATATATAT others(8): Show ATATATATATATATTT	intron_variant intron_variant	MODIFIER	NA18522.hp2 NA18522.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0020 a0001c0001t0001g0020	1	80	0.0125	15	c.216 others(36): Show c.2167+11201_2167+11202insATATATATATATTTT	PTPRM	ENSG00000173482.17	transcript	ENST00000580170.6	protein_coding	13/32		INFO_REALIGN_3_PRIME	chr18	TogoVar
PTPRM_chr18_7562316_8411856	8206248	T T	TTTTTATT others(8): Show TTTTTATTTTATTTTA	intron_variant intron_variant	MODIFIER	HG00673.hp2 HG01928.hp1 HG01928.hp2 others(19): Show HG00673.hp2 HG01928.hp1 HG01928.hp2 HG02040.hp1 HG02145.hp1 HG02145.hp2 HG02572.hp2 HG02622.hp1 HG02622.hp2 HG02630.hp2 HG02723.hp1 HG02809.hp1 HG02896.hp2 HG02965.hp2 HG03471.hp1 HG03471.hp2 HG03540.hp2 NA18522.hp1 NA18612.hp1 NA18612.hp2 NA18959.hp2 NA19043.hp1	a0001 a0002 a0001 a0002	a0001c0001 a0001c0002 a0001c0003 others(7): Show a0001c0001 a0001c0002 a0001c0003 a0001c0004 a0001c0005 a0001c0008 a0001c0012 a0001c0013 a0001c0020 a0002c0010	a0001c0001t0001 a0001c0001t0002 a0001c0001t0004 others(13): Show a0001c0001t0001 a0001c0001t0002 a0001c0001t0004 a0001c0002t0001 a0001c0002t0002 a0001c0002t0006 a0001c0003t0001 a0001c0003t0002 a0001c0004t0001 a0001c0004t0002 a0001c0005t0002 a0001c0008t0002 a0001c0012t0002 a0001c0013t0002 a0001c0020t0001 a0002c0010t0001	a0001c0001t0001g0001 a0001c0001t0001g0051 a0001c0001t0001g0059 others(19): Show a0001c0001t0001g0001 a0001c0001t0001g0051 a0001c0001t0001g0059 a0001c0001t0002g0031 a0001c0001t0004g0069 a0001c0002t0001g0052 a0001c0002t0001g0053 a0001c0002t0002g0013 a0001c0002t0002g0056 a0001c0002t0006g0073 a0001c0003t0001g0005 a0001c0003t0002g0003 a0001c0004t0001g0016 a0001c0004t0001g0055 a0001c0004t0001g0066 a0001c0004t0002g0028 a0001c0005t0002g0024 a0001c0008t0002g0025 a0001c0012t0002g0035 a0001c0013t0002g0034 a0001c0020t0001g0061 a0002c0010t0001g0047	22	80	0.2750	15	c.230 others(36): Show c.2301-37800_2301-37786dupATTTTATTTTATTTT	PTPRM	ENSG00000173482.17	transcript	ENST00000580170.6	protein_coding	14/32		INFO_REALIGN_3_PRIME	chr18	TogoVar
PTPRM_chr18_7562316_8411856	8240777	G G	GGAGAGGA others(8): Show GGAGAGGAGAGAGAGA	intron_variant intron_variant	MODIFIER	HG00673.hp2 HG00673.hp2	a0001 a0001	a0001c0002 a0001c0002	a0001c0002t0001 a0001c0002t0001	a0001c0002t0001g0053 a0001c0002t0001g0053	1	80	0.0125	15	c.230 others(34): Show c.2301-3276_2301-3275insGAGAGAGAGAGAGAG	PTPRM	ENSG00000173482.17	transcript	ENST00000580170.6	protein_coding	14/32		INFO_REALIGN_3_PRIME	chr18	TogoVar
PTPRM_chr18_7562316_8411856	8372056	C C	CTTTTTTT others(8): Show CTTTTTTTTTTTTTTT	intron_variant intron_variant	MODIFIER	HG01515.hp1 HG02040.hp1 NA18612.hp1 HG01515.hp1 HG02040.hp1 NA18612.hp1	a0001 a0001	a0001c0001 a0001c0002 a0001c0013 a0001c0001 a0001c0002 a0001c0013	a0001c0001t0002 a0001c0002t0002 a0001c0013t0002 a0001c0001t0002 a0001c0002t0002 a0001c0013t0002	a0001c0001t0002g0031 a0001c0002t0002g0032 a0001c0013t0002g0034 a0001c0001t0002g0031 a0001c0002t0002g0032 a0001c0013t0002g0034	3	80	0.0375	15	c.317 others(34): Show c.3171+1062_3171+1076dupTTTTTTTTTTTTTTT	PTPRM	ENSG00000173482.17	transcript	ENST00000580170.6	protein_coding	24/32		INFO_REALIGN_3_PRIME	chr18	TogoVar
PTPRO_chr12_15317508_15603331	15448339	T T	TAAAAAAA others(8): Show TAAAAAAAAAAAAAAA	intron_variant intron_variant	MODIFIER	HG00621.hp1 HG00673.hp2 HG02738.hp2 others(3): Show HG00621.hp1 HG00673.hp2 HG02738.hp2 HG02809.hp1 NA19066.hp1 NA21309.hp2	a0001 a0001	a0001c0001 a0001c0005 a0001c0001 a0001c0005	a0001c0001t0001 a0001c0001t0009 a0001c0005t0005 a0001c0001t0001 a0001c0001t0009 a0001c0005t0005	a0001c0001t0001g0004 a0001c0001t0001g0016 a0001c0001t0001g0104 others(3): Show a0001c0001t0001g0004 a0001c0001t0001g0016 a0001c0001t0001g0104 a0001c0001t0009g0048 a0001c0005t0005g0097 a0001c0005t0005g0098	6	164	0.0366	15	c.76- others(32): Show c.76-35628_76-35614dupAAAAAAAAAAAAAAA	PTPRO	ENSG00000151490.15	transcript	ENST00000281171.9	protein_coding	1/26		INFO_REALIGN_3_PRIME	chr12	TogoVar
PTPRO_chr12_15317508_15603331	15527875	A A	ACCCGCCC others(8): Show ACCCGCCCACCACCCC	intron_variant intron_variant	MODIFIER	HG00733.hp2 HG01123.hp2 HG01167.hp1 others(56): Show HG00733.hp2 HG01123.hp2 HG01167.hp1 HG01167.hp2 HG01169.hp1 HG01169.hp2 HG01884.hp2 HG02109.hp1 HG02109.hp2 HG02132.hp2 HG02257.hp2 HG02300.hp1 HG02451.hp1 HG02451.hp2 HG02630.hp1 HG02683.hp1 HG02683.hp2 HG02717.hp1 HG02717.hp2 HG02723.hp1 HG02723.hp2 HG02809.hp1 HG02895.hp2 HG02897.hp1 HG02922.hp1 HG02922.hp2 HG03098.hp2 HG03130.hp1 HG03130.hp2 HG03139.hp1 HG03139.hp2 HG03195.hp1 HG03209.hp1 HG03225.hp1 HG03225.hp2 HG03471.hp2 HG03486.hp1 HG03491.hp1 HG03492.hp2 HG03516.hp1 HG03540.hp2 HG04115.hp1 HG04115.hp2 HG04184.hp1 HG06807.hp1 HG06807.hp2 NA18946.hp1 NA18946.hp2 NA18960.hp2 NA18961.hp2 NA18986.hp1 NA18989.hp2 NA19003.hp2 NA19012.hp2 NA19030.hp1 NA19056.hp1 NA19240.hp1 NA21309.hp1 NA21309.hp2	a0001 a0003 a0001 a0003	a0001c0002 a0001c0004 a0001c0005 others(4): Show a0001c0002 a0001c0004 a0001c0005 a0001c0006 a0001c0008 a0001c0009 a0003c0010	a0001c0002t0001 a0001c0002t0002 a0001c0002t0003 others(16): Show a0001c0002t0001 a0001c0002t0002 a0001c0002t0003 a0001c0002t0004 a0001c0002t0005 a0001c0002t0006 a0001c0002t0007 a0001c0002t0008 a0001c0002t0011 a0001c0002t0012 a0001c0002t0015 a0001c0004t0001 a0001c0004t0002 a0001c0005t0002 a0001c0005t0005 a0001c0006t0004 a0001c0008t0004 a0001c0009t0001 a0003c0010t0013	a0001c0002t0001g0008 a0001c0002t0001g0018 a0001c0002t0001g0019 others(56): Show a0001c0002t0001g0008 a0001c0002t0001g0018 a0001c0002t0001g0019 a0001c0002t0001g0032 a0001c0002t0001g0035 a0001c0002t0001g0039 a0001c0002t0001g0077 a0001c0002t0001g0087 a0001c0002t0001g0117 a0001c0002t0001g0132 a0001c0002t0001g0155 a0001c0002t0002g0050 a0001c0002t0002g0063 a0001c0002t0002g0064 a0001c0002t0002g0076 a0001c0002t0002g0131 a0001c0002t0003g0028 a0001c0002t0003g0033 a0001c0002t0003g0057 a0001c0002t0003g0079 a0001c0002t0003g0116 a0001c0002t0003g0129 a0001c0002t0003g0133 a0001c0002t0004g0034 a0001c0002t0004g0056 a0001c0002t0004g0163 a0001c0002t0005g0075 a0001c0002t0006g0058 a0001c0002t0006g0059 a0001c0002t0007g0080 a0001c0002t0008g0027 a0001c0002t0008g0052 a0001c0002t0011g0082 a0001c0002t0012g0084 a0001c0002t0015g0095 a0001c0004t0001g0005 a0001c0004t0001g0007 a0001c0004t0001g0017 a0001c0004t0001g0024 a0001c0004t0001g0025 a0001c0004t0001g0043 a0001c0004t0001g0099 a0001c0004t0001g0100 a0001c0004t0001g0142 a0001c0004t0001g0159 a0001c0004t0002g0127 a0001c0004t0002g0161 a0001c0005t0002g0109 a0001c0005t0005g0096 a0001c0005t0005g0097 a0001c0005t0005g0098 a0001c0005t0005g0108 a0001c0006t0004g0123 a0001c0006t0004g0152 a0001c0008t0004g0040 a0001c0008t0004g0071 a0001c0009t0001g0153 a0001c0009t0001g0154 a0003c0010t0013g0054	59	164	0.3598	15	c.216 others(34): Show c.2164+1622_2164+1623insCACCCCCCCGCCCAC	PTPRO	ENSG00000151490.15	transcript	ENST00000281171.9	protein_coding	12/26		INFO_REALIGN_3_PRIME	chr12	TogoVar
PTPRO_chr12_15317508_15603331	15527879	G G	GCCCACCA others(8): Show GCCCACCACCCCCCCA	intron_variant intron_variant	MODIFIER	HG02809.hp2 HG02809.hp2	a0001 a0001	a0001c0002 a0001c0002	a0001c0002t0002 a0001c0002t0002	a0001c0002t0002g0135 a0001c0002t0002g0135	1	164	0.0061	15	c.216 others(34): Show c.2164+1622_2164+1623insCACCCCCCCACCCAC	PTPRO	ENSG00000151490.15	transcript	ENST00000281171.9	protein_coding	12/26		INFO_REALIGN_3_PRIME	chr12	TogoVar
PTPRQ_chr12_80439235_80685273	80558119	C C	CTTTCTTT others(8): Show CTTTCTTTTCTTTTCT	intron_variant intron_variant	MODIFIER	HG00099.hp2 HG00741.hp2 HG01243.hp2 others(17): Show HG00099.hp2 HG00741.hp2 HG01243.hp2 HG01256.hp1 HG01258.hp2 HG02071.hp1 HG02280.hp2 HG02451.hp1 HG02735.hp1 HG02818.hp1 HG03139.hp1 HG03225.hp1 HG03486.hp2 HG03516.hp1 HG03540.hp2 HG03579.hp2 NA18906.hp1 NA18960.hp2 NA18979.hp2 NA19030.hp2	a0001 a0003 a0006 others(13): Show a0001 a0003 a0006 a0007 a0012 a0019 a0024 a0027 a0029 a0033 a0042 a0049 a0058 a0059 a0062 a0066	a0001c0001 a0001c0013 a0003c0004 others(15): Show a0001c0001 a0001c0013 a0003c0004 a0003c0044 a0006c0016 a0007c0060 a0012c0017 a0019c0028 a0024c0021 a0027c0052 a0029c0030 a0033c0031 a0042c0050 a0049c0068 a0058c0082 a0059c0043 a0062c0058 a0066c0036	a0001c0001t0001 a0001c0013t0001 a0003c0004t0002 others(15): Show a0001c0001t0001 a0001c0013t0001 a0003c0004t0002 a0003c0044t0002 a0006c0016t0002 a0007c0060t0002 a0012c0017t0002 a0019c0028t0001 a0024c0021t0003 a0027c0052t0001 a0029c0030t0001 a0033c0031t0004 a0042c0050t0002 a0049c0068t0002 a0058c0082t0003 a0059c0043t0004 a0062c0058t0002 a0066c0036t0001	a0001c0001t0001g0061 a0001c0013t0001g0057 a0003c0004t0002g0125 others(16): Show a0001c0001t0001g0061 a0001c0013t0001g0057 a0003c0004t0002g0125 a0003c0044t0002g0123 a0006c0016t0002g0158 a0007c0060t0002g0073 a0012c0017t0002g0100 a0019c0028t0001g0001 a0024c0021t0003g0163 a0024c0021t0003g0165 a0027c0052t0001g0177 a0029c0030t0001g0130 a0033c0031t0004g0026 a0042c0050t0002g0175 a0049c0068t0002g0003 a0058c0082t0003g0114 a0059c0043t0004g0076 a0062c0058t0002g0146 a0066c0036t0001g0021	20	178	0.1124	15	c.428 others(34): Show c.4285+8423_4285+8437dupTCTTTTCTTTTCTTT	PTPRQ	ENSG00000139304.16	transcript	ENST00000644991.3	protein_coding	25/44		INFO_REALIGN_3_PRIME	chr12	TogoVar
PTPRQ_chr12_80439235_80685273	80558168	C C	CTTTTCTT others(8): Show CTTTTCTTTTCTTTCT	intron_variant intron_variant	MODIFIER	HG03195.hp2 HG03195.hp2	a0052 a0052	a0052c0065 a0052c0065	a0052c0065t0002 a0052c0065t0002	a0052c0065t0002g0115 a0052c0065t0002g0115	1	178	0.0056	15	c.428 others(34): Show c.4285+8437_4285+8438insTCTTTTCTTTCTTTT	PTPRQ	ENSG00000139304.16	transcript	ENST00000644991.3	protein_coding	25/44		INFO_REALIGN_3_PRIME	chr12	TogoVar
PTPRR_chr12_70633079_70925738	70658883	G G	GTTTTTTT others(8): Show GTTTTTTTTTTTTTTT	intron_variant intron_variant	MODIFIER	HG00735.hp1 HG00735.hp1	a0004 a0004	a0004c0005 a0004c0005	a0004c0005t0001 a0004c0005t0001	a0004c0005t0001g0166 a0004c0005t0001g0166	1	204	0.0049	15	c.176 others(34): Show c.1766+2042_1766+2056dupAAAAAAAAAAAAAAA	PTPRR	ENSG00000153233.13	transcript	ENST00000283228.7	protein_coding	12/13			chr12	TogoVar
PTPRR_chr12_70633079_70925738	70685473	C C	CAAAAAAA others(8): Show CAAAAAAAAAAAAAAA	intron_variant intron_variant	MODIFIER	HG02055.hp1 HG03540.hp1 NA20752.hp1 HG02055.hp1 HG03540.hp1 NA20752.hp1	a0002 a0013 a0002 a0013	a0002c0002 a0013c0020 a0002c0002 a0013c0020	a0002c0002t0002 a0013c0020t0002 a0002c0002t0002 a0013c0020t0002	a0002c0002t0002g0032 a0002c0002t0002g0199 a0013c0020t0002g0137 a0002c0002t0002g0032 a0002c0002t0002g0199 a0013c0020t0002g0137	3	204	0.0147	15	c.128 others(32): Show c.1280-705_1280-691dupTTTTTTTTTTTTTTT	PTPRR	ENSG00000153233.13	transcript	ENST00000283228.7	protein_coding	8/13			chr12	TogoVar
PTPRR_chr12_70633079_70925738	70821213	C C	CTTTTTTT others(8): Show CTTTTTTTTTTTTTTT	intron_variant intron_variant	MODIFIER	HG01884.hp1 HG02145.hp2 NA21309.hp2 HG01884.hp1 HG02145.hp2 NA21309.hp2	a0001 a0003 a0008 a0001 a0003 a0008	a0001c0001 a0003c0003 a0008c0009 a0001c0001 a0003c0003 a0008c0009	a0001c0001t0001 a0003c0003t0001 a0008c0009t0001 a0001c0001t0001 a0003c0003t0001 a0008c0009t0001	a0001c0001t0001g0018 a0003c0003t0001g0020 a0008c0009t0001g0100 a0001c0001t0001g0018 a0003c0003t0001g0020 a0008c0009t0001g0100	3	204	0.0147	15	c.358 others(34): Show c.358-56450_358-56436dupAAAAAAAAAAAAAAA	PTPRR	ENSG00000153233.13	transcript	ENST00000283228.7	protein_coding	2/13			chr12	TogoVar
PTPRR_chr12_70633079_70925738	70872694	C C	CAAAAAAA others(8): Show CAAAAAAAAAAAAAAA	intron_variant intron_variant	MODIFIER	HG01884.hp1 HG01884.hp2 HG02451.hp2 others(6): Show HG01884.hp1 HG01884.hp2 HG02451.hp2 HG02486.hp1 HG02615.hp1 HG02965.hp1 HG06807.hp2 NA18522.hp2 NA21309.hp2	a0001 a0002 a0003 a0001 a0002 a0003	a0001c0001 a0001c0004 a0002c0002 others(1): Show a0001c0001 a0001c0004 a0002c0002 a0003c0003	a0001c0001t0001 a0001c0004t0001 a0002c0002t0001 others(1): Show a0001c0001t0001 a0001c0004t0001 a0002c0002t0001 a0003c0003t0001	a0001c0001t0001g0018 a0001c0004t0001g0042 a0002c0002t0001g0019 others(6): Show a0001c0001t0001g0018 a0001c0004t0001g0042 a0002c0002t0001g0019 a0002c0002t0001g0022 a0002c0002t0001g0024 a0002c0002t0001g0041 a0002c0002t0001g0043 a0003c0003t0001g0020 a0003c0003t0001g0196	9	204	0.0441	15	c.357 others(34): Show c.357+19970_357+19984dupTTTTTTTTTTTTTTT	PTPRR	ENSG00000153233.13	transcript	ENST00000283228.7	protein_coding	2/13			chr12	TogoVar
PTPRR_chr12_70633079_70925738	70884871	C C	CAAAAAAA others(8): Show CAAAAAAAAAAAAAAA	intron_variant intron_variant	MODIFIER	HG03130.hp1 HG03130.hp1	a0008 a0008	a0008c0009 a0008c0009	a0008c0009t0001 a0008c0009t0001	a0008c0009t0001g0081 a0008c0009t0001g0081	1	204	0.0049	15	c.357 others(32): Show c.357+7793_357+7807dupTTTTTTTTTTTTTTT	PTPRR	ENSG00000153233.13	transcript	ENST00000283228.7	protein_coding	2/13			chr12	TogoVar
PTPRS_chr19_5200508_5345812	5203846	C C	CTTTTTTT others(8): Show CTTTTTTTTTTTTTTT	downstream_gene_variant downstream_gene_variant	MODIFIER	HG06807.hp2 HG06807.hp2	a0001 a0001	a0001c0072 a0001c0072	a0001c0072t0001 a0001c0072t0001	a0001c0072t0001g0009 a0001c0072t0001g0009	1	276	0.0036	15	c.29 others(26): Show c.2913_*2927dupAAAAAAAAAAAAAAA	PTPRS	ENSG00000105426.19	transcript	ENST00000262963.11	protein_coding		1661		chr19	TogoVar
PTPRS_chr19_5200508_5345812	5228347	G G	GAAAAAAA others(8): Show GAAAAAAAAAAAAAAA	intron_variant intron_variant	MODIFIER	NA20129.hp2 NA20129.hp2	a0001 a0001	a0001c0048 a0001c0048	a0001c0048t0001 a0001c0048t0001	a0001c0048t0001g0047 a0001c0048t0001g0047	1	276	0.0036	15	c.237 others(32): Show c.2376+954_2376+968dupTTTTTTTTTTTTTTT	PTPRS	ENSG00000105426.19	transcript	ENST00000262963.11	protein_coding	16/37			chr19	TogoVar
PTPRS_chr19_5200508_5345812	5228361	A A	AAAAAAAA others(8): Show AAAAAAAAAAAAAAAG	intron_variant intron_variant	MODIFIER	HG02451.hp2 HG02451.hp2	a0001 a0001	a0001c0004 a0001c0004	a0001c0004t0005 a0001c0004t0005	a0001c0004t0005g0048 a0001c0004t0005g0048	1	276	0.0036	15	c.237 others(32): Show c.2376+954_2376+955insCTTTTTTTTTTTTTT	PTPRS	ENSG00000105426.19	transcript	ENST00000262963.11	protein_coding	16/37			chr19	TogoVar
PTPRS_chr19_5200508_5345812	5233946	C C	CAAAAAAA others(8): Show CAAAAAAAAAAAAAAA	intron_variant intron_variant	MODIFIER	HG01106.hp1 HG01975.hp2 HG01106.hp1 HG01975.hp2	a0001 a0006 a0001 a0006	a0001c0001 a0006c0041 a0001c0001 a0006c0041	a0001c0001t0003 a0006c0041t0001 a0001c0001t0003 a0006c0041t0001	a0001c0001t0003g0074 a0006c0041t0001g0265 a0001c0001t0003g0074 a0006c0041t0001g0265	2	276	0.0073	15	c.185 others(34): Show c.1850-2346_1850-2332dupTTTTTTTTTTTTTTT	PTPRS	ENSG00000105426.19	transcript	ENST00000262963.11	protein_coding	13/37			chr19	TogoVar
PTPRS_chr19_5200508_5345812	5316928	G G	GGCCCGTG others(8): Show GGCCCGTGGGAGAAGC	intron_variant intron_variant	MODIFIER	NA18949.hp2 NA18949.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0239 a0001c0001t0001g0239	1	276	0.0036	15	c.-95 others(34): Show c.-95+23735_-95+23736insGCTTCTCCCACGGGC	PTPRS	ENSG00000105426.19	transcript	ENST00000262963.11	protein_coding	1/37			chr19	TogoVar
PTPRT_chr20_42067756_43194906	42086747	A A	ATATATAT others(8): Show ATATATATATATATAT	intron_variant intron_variant	MODIFIER	NA19240.hp2 NA19240.hp2	a0004 a0004	a0004c0006 a0004c0006	a0004c0006t0008 a0004c0006t0008	a0004c0006t0008g0054 a0004c0006t0008g0054	1	62	0.0161	15	c.384 others(32): Show c.3847-895_3847-894insATATATATATATATA	PTPRT	ENSG00000196090.14	transcript	ENST00000373187.6	protein_coding	27/30			chr20	TogoVar
PTPRT_chr20_42067756_43194906	42184518	C C	CCTTCTTC others(8): Show CCTTCTTCTTCTTCTT	intron_variant intron_variant	MODIFIER	HG01257.hp2 NA20905.hp2 HG01257.hp2 NA20905.hp2	a0002 a0002	a0002c0001 a0002c0005 a0002c0001 a0002c0005	a0002c0001t0025 a0002c0005t0012 a0002c0001t0025 a0002c0005t0012	a0002c0001t0025g0002 a0002c0005t0012g0009 a0002c0001t0025g0002 a0002c0005t0012g0009	2	62	0.0323	15	c.249 others(36): Show c.2491+14707_2491+14721dupAAGAAGAAGAAGAAG	PTPRT	ENSG00000196090.14	transcript	ENST00000373187.6	protein_coding	16/30			chr20	TogoVar
PTPRT_chr20_42067756_43194906	42184535	C C	CTCTTCTT others(8): Show CTCTTCTTCTTCTTCT	intron_variant intron_variant	MODIFIER	HG02622.hp2 HG02976.hp1 HG02976.hp2 others(1): Show HG02622.hp2 HG02976.hp1 HG02976.hp2 HG03471.hp2	a0001 a0007 a0009 a0001 a0007 a0009	a0001c0022 a0001c0023 a0007c0012 others(1): Show a0001c0022 a0001c0023 a0007c0012 a0009c0019	a0001c0022t0021 a0001c0023t0007 a0007c0012t0005 others(1): Show a0001c0022t0021 a0001c0023t0007 a0007c0012t0005 a0009c0019t0008	a0001c0022t0021g0045 a0001c0023t0007g0034 a0007c0012t0005g0017 others(1): Show a0001c0022t0021g0045 a0001c0023t0007g0034 a0007c0012t0005g0017 a0009c0019t0008g0050	4	62	0.0645	15	c.249 others(36): Show c.2491+14704_2491+14705insAGAAGAAGAAGAAGA	PTPRT	ENSG00000196090.14	transcript	ENST00000373187.6	protein_coding	16/30			chr20	TogoVar
PTPRT_chr20_42067756_43194906	42184541	C C	CTCTTCCT others(8): Show CTCTTCCTCTTCTTCT	intron_variant intron_variant	MODIFIER	HG02965.hp1 HG02965.hp1	a0001 a0001	a0001c0002 a0001c0002	a0001c0002t0023 a0001c0002t0023	a0001c0002t0023g0044 a0001c0002t0023g0044	1	62	0.0161	15	c.249 others(36): Show c.2491+14698_2491+14699insAGAAGAAGAGGAAGA	PTPRT	ENSG00000196090.14	transcript	ENST00000373187.6	protein_coding	16/30			chr20	TogoVar
PTPRT_chr20_42067756_43194906	42184541	C C	CTCTTCTT others(8): Show CTCTTCTTCTTCTTCT	intron_variant intron_variant	MODIFIER	HG00738.hp2 NA20905.hp1 HG00738.hp2 NA20905.hp1	a0001 a0002 a0001 a0002	a0001c0025 a0002c0001 a0001c0025 a0002c0001	a0001c0025t0015 a0002c0001t0002 a0001c0025t0015 a0002c0001t0002	a0001c0025t0015g0028 a0002c0001t0002g0015 a0001c0025t0015g0028 a0002c0001t0002g0015	2	62	0.0323	15	c.249 others(36): Show c.2491+14684_2491+14698dupAGAAGAAGAAGAAGA	PTPRT	ENSG00000196090.14	transcript	ENST00000373187.6	protein_coding	16/30			chr20	TogoVar
PTPRT_chr20_42067756_43194906	42300756	G G	GTATTATT others(8): Show GTATTATTATTATTAT	intron_variant intron_variant	MODIFIER	HG02886.hp1 HG02896.hp2 HG02897.hp1 others(2): Show HG02886.hp1 HG02896.hp2 HG02897.hp1 HG03209.hp2 HG03540.hp1	a0001 a0002 a0001 a0002	a0001c0003 a0002c0001 a0002c0015 a0001c0003 a0002c0001 a0002c0015	a0001c0003t0001 a0001c0003t0029 a0002c0001t0011 others(1): Show a0001c0003t0001 a0001c0003t0029 a0002c0001t0011 a0002c0015t0001	a0001c0003t0001g0038 a0001c0003t0029g0048 a0002c0001t0011g0019 others(2): Show a0001c0003t0001g0038 a0001c0003t0029g0048 a0002c0001t0011g0019 a0002c0001t0011g0020 a0002c0015t0001g0013	5	62	0.0807	15	c.213 others(36): Show c.2139+14952_2139+14966dupATAATAATAATAATA	PTPRT	ENSG00000196090.14	transcript	ENST00000373187.6	protein_coding	12/30			chr20	TogoVar
PTPRT_chr20_42067756_43194906	42315184	C C	CAAAAAAA others(8): Show CAAAAAAAAAAAAAAA	intron_variant intron_variant	MODIFIER	HG03209.hp2 HG03209.hp2	a0002 a0002	a0002c0015 a0002c0015	a0002c0015t0001 a0002c0015t0001	a0002c0015t0001g0013 a0002c0015t0001g0013	1	62	0.0161	15	c.213 others(32): Show c.2139+524_2139+538dupTTTTTTTTTTTTTTT	PTPRT	ENSG00000196090.14	transcript	ENST00000373187.6	protein_coding	12/30			chr20	TogoVar
PTPRT_chr20_42067756_43194906	42569081	A A	AAAAATAT others(8): Show AAAAATATATATATAT	intron_variant intron_variant	MODIFIER	HG00438.hp2 HG00438.hp2	a0002 a0002	a0002c0004 a0002c0004	a0002c0004t0002 a0002c0004t0002	a0002c0004t0002g0007 a0002c0004t0002g0007	1	62	0.0161	15	c.115 others(36): Show c.1154-96520_1154-96519insATATATATATATTTT	PTPRT	ENSG00000196090.14	transcript	ENST00000373187.6	protein_coding	7/30			chr20	TogoVar
PTPRT_chr20_42067756_43194906	42569081	A A	AAATATAT others(8): Show AAATATATATATATAT	intron_variant intron_variant	MODIFIER	HG00438.hp1 HG00438.hp1	a0002 a0002	a0002c0001 a0002c0001	a0002c0001t0026 a0002c0001t0026	a0002c0001t0026g0012 a0002c0001t0026g0012	1	62	0.0161	15	c.115 others(36): Show c.1154-96520_1154-96519insATATATATATATATT	PTPRT	ENSG00000196090.14	transcript	ENST00000373187.6	protein_coding	7/30			chr20	TogoVar
PTPRT_chr20_42067756_43194906	42648820	G G	GTTTTTTT others(8): Show GTTTTTTTTTTTGTTT	intron_variant intron_variant	MODIFIER	HG01243.hp1 HG02622.hp2 HG02647.hp1 others(2): Show HG01243.hp1 HG02622.hp2 HG02647.hp1 HG03209.hp2 NA19240.hp1	a0001 a0002 a0007 a0001 a0002 a0007	a0001c0008 a0001c0027 a0001c0029 others(2): Show a0001c0008 a0001c0027 a0001c0029 a0002c0015 a0007c0012	a0001c0008t0001 a0001c0027t0028 a0001c0029t0013 others(2): Show a0001c0008t0001 a0001c0027t0028 a0001c0029t0013 a0002c0015t0001 a0007c0012t0005	a0001c0008t0001g0060 a0001c0027t0028g0049 a0001c0029t0013g0057 others(2): Show a0001c0008t0001g0060 a0001c0027t0028g0049 a0001c0029t0013g0057 a0002c0015t0001g0013 a0007c0012t0005g0017	5	62	0.0807	15	c.115 others(36): Show c.1153+29045_1153+29046insAAACAAAAAAAAAAA	PTPRT	ENSG00000196090.14	transcript	ENST00000373187.6	protein_coding	7/30			chr20	TogoVar
PTPRT_chr20_42067756_43194906	42648822	T T	TTTTTTTT others(8): Show TTTTTTTTTTGTTTTG	intron_variant intron_variant	MODIFIER	HG01243.hp2 HG02897.hp2 HG03017.hp1 HG01243.hp2 HG02897.hp2 HG03017.hp1	a0001 a0002 a0001 a0002	a0001c0003 a0001c0026 a0002c0005 a0001c0003 a0001c0026 a0002c0005	a0001c0003t0002 a0001c0026t0007 a0002c0005t0012 a0001c0003t0002 a0001c0026t0007 a0002c0005t0012	a0001c0003t0002g0043 a0001c0026t0007g0059 a0002c0005t0012g0010 a0001c0003t0002g0043 a0001c0026t0007g0059 a0002c0005t0012g0010	3	62	0.0484	15	c.115 others(36): Show c.1153+29043_1153+29044insCAAAACAAAAAAAAA	PTPRT	ENSG00000196090.14	transcript	ENST00000373187.6	protein_coding	7/30			chr20	TogoVar
PTPRT_chr20_42067756_43194906	42683271	T T	TTTTTGTT others(8): Show TTTTTGTTTTGTTTTG	intron_variant intron_variant	MODIFIER	HG00738.hp2 HG03209.hp1 HG00738.hp2 HG03209.hp1	a0001 a0001	a0001c0008 a0001c0025 a0001c0008 a0001c0025	a0001c0008t0005 a0001c0025t0015 a0001c0008t0005 a0001c0025t0015	a0001c0008t0005g0037 a0001c0025t0015g0028 a0001c0008t0005g0037 a0001c0025t0015g0028	2	62	0.0323	15	c.860 others(32): Show c.860-5127_860-5113dupCAAAACAAAACAAAA	PTPRT	ENSG00000196090.14	transcript	ENST00000373187.6	protein_coding	6/30			chr20	TogoVar
PTPRT_chr20_42067756_43194906	43016552	C C	CTTTTTTT others(8): Show CTTTTTTTTTTTTTTT	intron_variant intron_variant	MODIFIER	HG01109.hp2 HG01261.hp2 NA21309.hp1 others(1): Show HG01109.hp2 HG01261.hp2 NA21309.hp1 NA21309.hp2	a0001 a0002 a0003 others(1): Show a0001 a0002 a0003 a0006	a0001c0018 a0002c0016 a0003c0020 others(1): Show a0001c0018 a0002c0016 a0003c0020 a0006c0010	a0001c0018t0003 a0002c0016t0030 a0003c0020t0016 others(1): Show a0001c0018t0003 a0002c0016t0030 a0003c0020t0016 a0006c0010t0009	a0001c0018t0003g0030 a0002c0016t0030g0014 a0003c0020t0016g0029 others(1): Show a0001c0018t0003g0030 a0002c0016t0030g0014 a0003c0020t0016g0029 a0006c0010t0009g0021	4	62	0.0645	15	c.89- others(34): Show c.89-130635_89-130621dupAAAAAAAAAAAAAAA	PTPRT	ENSG00000196090.14	transcript	ENST00000373187.6	protein_coding	1/30			chr20	TogoVar
PTPRT_chr20_42067756_43194906	43103750	G G	GTAATAAT others(8): Show GTAATAATAATAATAA	intron_variant intron_variant	MODIFIER	HG01261.hp2 HG02622.hp2 HG02896.hp2 others(5): Show HG01261.hp2 HG02622.hp2 HG02896.hp2 HG02897.hp1 HG02897.hp2 HG02965.hp2 HG03017.hp1 NA19030.hp2	a0001 a0002 a0006 others(1): Show a0001 a0002 a0006 a0007	a0001c0002 a0001c0026 a0002c0001 others(4): Show a0001c0002 a0001c0026 a0002c0001 a0002c0005 a0002c0013 a0006c0010 a0007c0012	a0001c0002t0002 a0001c0026t0007 a0002c0001t0011 others(4): Show a0001c0002t0002 a0001c0026t0007 a0002c0001t0011 a0002c0005t0012 a0002c0013t0001 a0006c0010t0009 a0007c0012t0005	a0001c0002t0002g0058 a0001c0026t0007g0059 a0002c0001t0011g0019 others(5): Show a0001c0002t0002g0058 a0001c0026t0007g0059 a0002c0001t0011g0019 a0002c0001t0011g0020 a0002c0005t0012g0010 a0002c0013t0001g0016 a0006c0010t0009g0021 a0007c0012t0005g0017	8	62	0.1290	15	c.88+ others(32): Show c.88+85881_88+85895dupTTATTATTATTATTA	PTPRT	ENSG00000196090.14	transcript	ENST00000373187.6	protein_coding	1/30			chr20	TogoVar
PTPRU_chr1_29231522_29331800	29277803	C C	CTTTTTTT others(8): Show CTTTTTTTTTTTTTTT	intron_variant intron_variant	MODIFIER	HG03139.hp2 HG03139.hp2	a0001 a0001	a0001c0027 a0001c0027	a0001c0027t0001 a0001c0027t0001	a0001c0027t0001g0119 a0001c0027t0001g0119	1	296	0.0034	15	c.145 others(34): Show c.1454-1190_1454-1176dupTTTTTTTTTTTTTTT	PTPRU	ENSG00000060656.20	transcript	ENST00000373779.8	protein_coding	8/29		INFO_REALIGN_3_PRIME	chr1	TogoVar
PTPRU_chr1_29231522_29331800	29294975	A A	AACATGAA others(8): Show AACATGAAGCTGTGCC	intron_variant intron_variant	MODIFIER	HG00408.hp1 HG00673.hp2 HG01074.hp2 others(34): Show HG00408.hp1 HG00673.hp2 HG01074.hp2 HG01167.hp1 HG01169.hp1 HG01346.hp2 HG02015.hp1 HG02027.hp1 HG02071.hp2 HG02155.hp1 HG02258.hp1 HG02523.hp1 HG02723.hp2 HG03017.hp1 HG03688.hp1 NA18948.hp1 NA18963.hp2 NA18968.hp1 NA18969.hp1 NA18971.hp2 NA18975.hp2 NA18979.hp2 NA18983.hp1 NA18984.hp2 NA18990.hp1 NA18993.hp2 NA18994.hp2 NA18997.hp1 NA18998.hp2 NA19043.hp2 NA19057.hp2 NA19062.hp1 NA19063.hp1 NA19067.hp1 NA19068.hp1 NA19086.hp1 NA19091.hp1	a0001 a0002 a0011 others(1): Show a0001 a0002 a0011 a0017	a0001c0001 a0001c0042 a0002c0004 others(3): Show a0001c0001 a0001c0042 a0002c0004 a0002c0020 a0011c0021 a0017c0030	a0001c0001t0001 a0001c0001t0002 a0001c0042t0001 others(5): Show a0001c0001t0001 a0001c0001t0002 a0001c0042t0001 a0002c0004t0001 a0002c0004t0002 a0002c0020t0001 a0011c0021t0002 a0017c0030t0001	a0001c0001t0001g0001 a0001c0001t0001g0052 a0001c0001t0001g0076 others(33): Show a0001c0001t0001g0001 a0001c0001t0001g0052 a0001c0001t0001g0076 a0001c0001t0001g0077 a0001c0001t0001g0083 a0001c0001t0001g0088 a0001c0001t0001g0095 a0001c0001t0001g0096 a0001c0001t0001g0097 a0001c0001t0001g0099 a0001c0001t0001g0100 a0001c0001t0001g0102 a0001c0001t0001g0140 a0001c0001t0001g0144 a0001c0001t0002g0221 a0001c0042t0001g0106 a0002c0004t0001g0010 a0002c0004t0001g0084 a0002c0004t0001g0085 a0002c0004t0001g0091 a0002c0004t0001g0092 a0002c0004t0001g0093 a0002c0004t0001g0094 a0002c0004t0001g0098 a0002c0004t0001g0101 a0002c0004t0001g0103 a0002c0004t0001g0105 a0002c0004t0001g0109 a0002c0004t0001g0121 a0002c0004t0001g0150 a0002c0004t0001g0258 a0002c0004t0002g0237 a0002c0004t0002g0242 a0002c0020t0001g0149 a0011c0021t0002g0219 a0017c0030t0001g0107	37	296	0.1250	15	c.247 others(34): Show c.2476+2951_2476+2965dupCATGAAGCTGTGCCA	PTPRU	ENSG00000060656.20	transcript	ENST00000373779.8	protein_coding	15/29		INFO_REALIGN_3_PRIME	chr1	TogoVar
PTTG1IP2_chr7_90464639_90518397	90497713	T T	TAAAAAAA others(8): Show TAAAAAAAAAAAAAAA	intron_variant intron_variant	MODIFIER	HG02976.hp2 HG02976.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0312 a0001c0001t0001g0312	1	384	0.0026	15	c.50 others(32): Show c.50+3284_*50+3285insAAAAAAAAAAAAAAA	PTTG1IP2	ENSG00000251154.2	transcript	ENST00000509356.2	protein_coding	6/6		INFO_REALIGN_3_PRIME	chr7	TogoVar

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