Joint Open Genome and Omics Platform (JoGo)

Search by Variant

Regionname

Chr

Snpeff genename

Sampleids

Snpeff haplotype class

Snpeff annotation impact

Snpeff annotation impact detail

Hapid

Samplehapid

No_hapid

No_samplehapid

Start

End

Minac

Maxac

Minlen

Maxlen

Sort By

Order by

regionname	pos	ref	alt	annotation	impact	samples	ahapids	chapids	thapids	thapids	ac	an	af	len	hgvs_c	genename	geneid	featuretype	featureid	transcript_biotype	rank	distance	status	chr	external
SUGP1_chr19_19271033_19325509	19310712	T T	TGGCTCAC others(9): Show TGGCTCACTGCAACCTC	intron_variant intron_variant	MODIFIER	HG00423.hp2 NA18970.hp1 HG00423.hp2 NA18970.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0002 a0001c0001t0002	a0001c0001t0002g0017 a0001c0001t0002g0017	2	332	0.0060	16	c.207 others(31): Show c.207-528_207-513dupGAGGTTGCAGTGAGCC	SUGP1	ENSG00000105705.16	transcript	ENST00000247001.10	protein_coding	2/13			chr19	TogoVar
SUGT1_chr13_52647836_52705909	52701802	G G	GACACACA others(9): Show GACACACACACACACAC	downstream_gene_variant downstream_gene_variant	MODIFIER	HG00423.hp1 HG00621.hp1 HG01891.hp2 others(8): Show HG00423.hp1 HG00621.hp1 HG01891.hp2 HG01952.hp2 HG03225.hp2 NA18964.hp1 NA18980.hp2 NA19064.hp2 NA19082.hp1 NA19086.hp2 NA19240.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0002 a0001c0001t0003 a0001c0001t0025 others(3): Show a0001c0001t0002 a0001c0001t0003 a0001c0001t0025 a0001c0001t0043 a0001c0001t0044 a0001c0001t0101	a0001c0001t0002g0114 a0001c0001t0002g0132 a0001c0001t0003g0001 others(7): Show a0001c0001t0002g0114 a0001c0001t0002g0132 a0001c0001t0003g0001 a0001c0001t0003g0003 a0001c0001t0003g0015 a0001c0001t0025g0001 a0001c0001t0025g0003 a0001c0001t0043g0050 a0001c0001t0044g0093 a0001c0001t0101g0142	11	310	0.0355	16	c.13 others(29): Show c.13967_*13968insACACACACACACACAC	SUGT1	ENSG00000165416.15	transcript	ENST00000310528.9	protein_coding		894		chr13	TogoVar
SULF1_chr8_69487847_69665912	69526798	A A	AAAGGAAG others(9): Show AAAGGAAGGAAGGAAGG	intron_variant intron_variant	MODIFIER	HG00140.hp2 HG00621.hp1 HG00639.hp1 others(7): Show HG00140.hp2 HG00621.hp1 HG00639.hp1 HG02258.hp2 HG02300.hp1 HG02572.hp1 HG02818.hp2 HG02922.hp2 NA18969.hp1 NA19056.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0002 a0001c0001t0003 others(2): Show a0001c0001t0001 a0001c0001t0002 a0001c0001t0003 a0001c0001t0014 a0001c0001t0016	a0001c0001t0001g0033 a0001c0001t0001g0048 a0001c0001t0001g0059 others(7): Show a0001c0001t0001g0033 a0001c0001t0001g0048 a0001c0001t0001g0059 a0001c0001t0001g0063 a0001c0001t0002g0189 a0001c0001t0002g0199 a0001c0001t0003g0067 a0001c0001t0003g0105 a0001c0001t0014g0111 a0001c0001t0016g0083	10	296	0.0338	16	c.-13 others(37): Show c.-134+24859_-134+24874dupAAGGAAGGAAGGAAGG	SULF1	ENSG00000137573.14	transcript	ENST00000402687.9	protein_coding	3/22		INFO_REALIGN_3_PRIME	chr8	TogoVar
SULF2_chr20_47652406_47790481	47656896	T T	TTTTTTTT others(9): Show TTTTTTTTTTTTTTTTG	downstream_gene_variant downstream_gene_variant	MODIFIER	HG01167.hp1 HG01169.hp2 HG01256.hp2 others(2): Show HG01167.hp1 HG01169.hp2 HG01256.hp2 NA19010.hp2 NA19012.hp1	a0001 a0001	a0001c0001 a0001c0002 a0001c0001 a0001c0002	a0001c0001t0021 a0001c0002t0017 a0001c0002t0019 others(1): Show a0001c0001t0021 a0001c0002t0017 a0001c0002t0019 a0001c0002t0024	a0001c0001t0021g0069 a0001c0002t0017g0259 a0001c0002t0019g0309 others(2): Show a0001c0001t0021g0069 a0001c0002t0017g0259 a0001c0002t0019g0309 a0001c0002t0019g0345 a0001c0002t0024g0026	5	364	0.0137	16	c.14 others(27): Show c.1465_*1466insCAAAAAAAAAAAAAAA	SULF2	ENSG00000196562.16	transcript	ENST00000688720.1	protein_coding		509		chr20	TogoVar
SULF2_chr20_47652406_47790481	47731182	C C	CTTTTTTT others(9): Show CTTTTTTTTTTTTTTTT	intron_variant intron_variant	MODIFIER	HG01257.hp1 NA18612.hp2 HG01257.hp1 NA18612.hp2	a0001 a0001	a0001c0001 a0001c0015 a0001c0001 a0001c0015	a0001c0001t0003 a0001c0015t0003 a0001c0001t0003 a0001c0015t0003	a0001c0001t0003g0362 a0001c0015t0003g0357 a0001c0001t0003g0362 a0001c0015t0003g0357	2	364	0.0055	16	c.415 others(33): Show c.415+5520_415+5521insAAAAAAAAAAAAAAAA	SULF2	ENSG00000196562.16	transcript	ENST00000688720.1	protein_coding	3/20			chr20	TogoVar
SULF2_chr20_47652406_47790481	47765435	A A	AAGAAGGG others(9): Show AAGAAGGGGCCAGAGGC	intron_variant intron_variant	MODIFIER	HG01884.hp2 HG03516.hp1 HG01884.hp2 HG03516.hp1	a0001 a0004 a0001 a0004	a0001c0002 a0004c0017 a0001c0002 a0004c0017	a0001c0002t0001 a0004c0017t0030 a0001c0002t0001 a0004c0017t0030	a0001c0002t0001g0205 a0004c0017t0030g0300 a0001c0002t0001g0205 a0004c0017t0030g0300	2	364	0.0055	16	c.-10 others(35): Show c.-100-7988_-100-7973dupGCCTCTGGCCCCTTCT	SULF2	ENSG00000196562.16	transcript	ENST00000688720.1	protein_coding	1/20			chr20	TogoVar
SULF2_chr20_47652406_47790481	47783276	T T	TAAGTCTA others(9): Show TAAGTCTAGGTCACTGG	intron_variant intron_variant	MODIFIER	NA18949.hp1 NA18949.hp1	a0001 a0001	a0001c0034 a0001c0034	a0001c0034t0002 a0001c0034t0002	a0001c0034t0002g0217 a0001c0034t0002g0217	1	364	0.0028	16	c.-10 others(35): Show c.-101+2066_-101+2067insCCAGTGACCTAGACTT	SULF2	ENSG00000196562.16	transcript	ENST00000688720.1	protein_coding	1/20			chr20	TogoVar
SULT1B1_chr4_69716167_69765620	69726033	C C	CATATATA others(9): Show CATATATATATATATAT	3_prime_UTR_variant 3_prime_UTR_variant	MODIFIER	HG02004.hp2 HG02004.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0098 a0001c0001t0098	a0001c0001t0098g0140 a0001c0001t0098g0140	1	408	0.0025	16	c.10 others(27): Show c.1039_*1054dupATATATATATATATAT	SULT1B1	ENSG00000173597.9	transcript	ENST00000310613.8	protein_coding	8/8	1054		chr4	TogoVar
SULT1C3_chr2_108234968_108265886	108239429	T T	TACACACA others(9): Show TACACACACACACACAC	upstream_gene_variant upstream_gene_variant	MODIFIER	HG03540.hp1 HG03540.hp1	a0002 a0002	a0002c0004 a0002c0004	a0002c0004t0001 a0002c0004t0001	a0002c0004t0001g0132 a0002c0004t0001g0132	1	376	0.0027	16	c.-66 others(25): Show c.-662_-661insACACACACACACACAC	SULT1C3	ENSG00000196228.5	transcript	ENST00000681802.2	protein_coding		538		chr2	TogoVar
SULT2A1_chr19_47865467_47891315	47869303	C C	CTTTTTTT others(9): Show CTTTTTTTTTTTTTTTT	downstream_gene_variant downstream_gene_variant	MODIFIER	HG02486.hp1 HG02486.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0021 a0001c0001t0001g0021	1	432	0.0023	16	c.21 others(27): Show c.2151_*2152insAAAAAAAAAAAAAAAA	SULT2A1	ENSG00000105398.4	transcript	ENST00000222002.4	protein_coding		1163		chr19	TogoVar
SULT2B1_chr19_48547172_48604423	48555549	C C	CCTCTCTC others(9): Show CCTCTCTCTCTCTCTCT	intron_variant intron_variant	MODIFIER	HG03139.hp1 HG03139.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0017 a0001c0001t0001g0017	1	376	0.0027	16	c.71+ others(31): Show c.71+3251_71+3266dupCTCTCTCTCTCTCTCT	SULT2B1	ENSG00000088002.12	transcript	ENST00000201586.7	protein_coding	1/6		INFO_REALIGN_3_PRIME	chr19	TogoVar
SULT2B1_chr19_48547172_48604423	48560666	A A	AAATTGTC others(9): Show AAATTGTCAATGAGGCT	intron_variant intron_variant	MODIFIER	NA18974.hp1 NA18974.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0270 a0001c0001t0001g0270	1	376	0.0027	16	c.71+ others(31): Show c.71+8345_71+8346insTTGTCAATGAGGCTAA	SULT2B1	ENSG00000088002.12	transcript	ENST00000201586.7	protein_coding	1/6		INFO_REALIGN_3_PRIME	chr19	TogoVar
SULT2B1_chr19_48547172_48604423	48602704	A A	AAAAAAAA others(9): Show AAAAAAAAAAAAAAAAT	downstream_gene_variant downstream_gene_variant	MODIFIER	NA18949.hp2 NA18949.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0167 a0001c0001t0001g0167	1	376	0.0027	16	c.32 others(27): Show c.3298_*3299insAAAAAAAAAAAAAAAT	SULT2B1	ENSG00000088002.12	transcript	ENST00000201586.7	protein_coding		3282		chr19	TogoVar
SULT2B1_chr19_48547172_48604423	48602704	A A	AAAAAATA others(9): Show AAAAAATATATATATAT	downstream_gene_variant downstream_gene_variant	MODIFIER	HG02976.hp2 HG02976.hp2	a0003 a0003	a0003c0011 a0003c0011	a0003c0011t0001 a0003c0011t0001	a0003c0011t0001g0043 a0003c0011t0001g0043	1	376	0.0027	16	c.32 others(27): Show c.3298_*3299insAAAAATATATATATAT	SULT2B1	ENSG00000088002.12	transcript	ENST00000201586.7	protein_coding		3282		chr19	TogoVar
SULT4A1_chr22_43819509_43867513	43842975	A A	ATCTCTCT others(9): Show ATCTCTCTCTCTCTCTC	intron_variant intron_variant	MODIFIER	HG01243.hp2 NA20752.hp2 HG01243.hp2 NA20752.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0003 a0001c0001t0012 a0001c0001t0003 a0001c0001t0012	a0001c0001t0003g0061 a0001c0001t0012g0069 a0001c0001t0003g0061 a0001c0001t0012g0069	2	386	0.0052	16	c.170 others(33): Show c.170-1059_170-1044dupGAGAGAGAGAGAGAGA	SULT4A1	ENSG00000130540.14	transcript	ENST00000330884.9	protein_coding	1/6			chr22	TogoVar
SUMF2_chr7_56059286_56085670	56071785	A A	AAAATAAA others(9): Show AAAATAAATAAATAAAT	intron_variant intron_variant	MODIFIER	HG02572.hp1 HG02572.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0004 a0001c0001t0004	a0001c0001t0004g0231 a0001c0001t0004g0231	1	412	0.0024	16	c.225 others(33): Show c.225-1197_225-1182dupATAAATAAATAAATAA	SUMF2	ENSG00000129103.19	transcript	ENST00000434526.8	protein_coding	2/8		INFO_REALIGN_3_PRIME	chr7	TogoVar
SUMF2_chr7_56059286_56085670	56071812	A A	ATAAATAA others(9): Show ATAAATAAATAAATAAT	intron_variant intron_variant	MODIFIER	HG03130.hp1 HG03130.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0004 a0001c0001t0004	a0001c0001t0004g0187 a0001c0001t0004g0187	1	412	0.0024	16	c.225 others(33): Show c.225-1182_225-1181insATAAATAAATAATTAA	SUMF2	ENSG00000129103.19	transcript	ENST00000434526.8	protein_coding	2/8		INFO_REALIGN_3_PRIME	chr7	TogoVar
SUMO1_chr2_202201182_202243597	202206056	C C	CAAAAAAA others(9): Show CAAAAAAAAAAAAAAAA	downstream_gene_variant downstream_gene_variant	MODIFIER	HG03453.hp1 HG03453.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0155 a0001c0001t0001g0155	1	374	0.0027	16	c.11 others(27): Show c.1196_*1197insTTTTTTTTTTTTTTTT	SUMO1	ENSG00000116030.17	transcript	ENST00000392246.7	protein_coding		125		chr2	TogoVar
SUMO2_chr17_75160586_75187959	75162278	C C	CATATATA others(9): Show CATATATATATATATAT	downstream_gene_variant downstream_gene_variant	MODIFIER	HG00597.hp2 HG01123.hp1 HG01257.hp1 others(25): Show HG00597.hp2 HG01123.hp1 HG01257.hp1 HG01258.hp1 HG01433.hp1 HG01515.hp1 HG01975.hp2 HG02056.hp1 HG02080.hp1 HG02083.hp1 HG02083.hp2 HG03239.hp1 HG03486.hp1 HG04204.hp1 NA18941.hp2 NA18945.hp1 NA18951.hp2 NA18953.hp1 NA18956.hp2 NA18957.hp1 NA18957.hp2 NA18961.hp2 NA18993.hp1 NA18993.hp2 NA19011.hp1 NA19077.hp2 NA19079.hp2 NA19087.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0002 a0001c0001t0005 others(5): Show a0001c0001t0001 a0001c0001t0002 a0001c0001t0005 a0001c0001t0008 a0001c0001t0014 a0001c0001t0022 a0001c0001t0032 a0001c0001t0033	a0001c0001t0001g0001 a0001c0001t0001g0069 a0001c0001t0001g0071 others(24): Show a0001c0001t0001g0001 a0001c0001t0001g0069 a0001c0001t0001g0071 a0001c0001t0001g0076 a0001c0001t0001g0107 a0001c0001t0001g0114 a0001c0001t0001g0124 a0001c0001t0001g0126 a0001c0001t0001g0130 a0001c0001t0001g0144 a0001c0001t0001g0146 a0001c0001t0001g0162 a0001c0001t0001g0166 a0001c0001t0001g0169 a0001c0001t0001g0188 a0001c0001t0001g0192 a0001c0001t0001g0262 a0001c0001t0001g0268 a0001c0001t0002g0260 a0001c0001t0002g0266 a0001c0001t0002g0274 a0001c0001t0005g0008 a0001c0001t0008g0095 a0001c0001t0014g0263 a0001c0001t0022g0152 a0001c0001t0032g0315 a0001c0001t0033g0234	28	398	0.0704	16	c.60 others(27): Show c.6045_*6060dupATATATATATATATAT	SUMO2	ENSG00000188612.12	transcript	ENST00000420826.7	protein_coding		3307		chr17	TogoVar
SUMO3_chr21_44800617_44823062	44810982	C C	CCATGCAC others(9): Show CCATGCACACACCCACA	intron_variant intron_variant	MODIFIER	HG02559.hp2 HG02922.hp2 HG03225.hp1 HG02559.hp2 HG02922.hp2 HG03225.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0002 a0001c0001t0013 a0001c0001t0002 a0001c0001t0013	a0001c0001t0002g0038 a0001c0001t0013g0108 a0001c0001t0002g0038 a0001c0001t0013g0108	3	406	0.0074	16	c.151 others(33): Show c.151-1880_151-1865dupTGTGGGTGTGTGCATG	SUMO3	ENSG00000184900.16	transcript	ENST00000332859.11	protein_coding	2/3			chr21	TogoVar
SUMO4_chr6_149395262_149406278	149403351	C C	CATATATA others(9): Show CATATATATACATATAT	downstream_gene_variant downstream_gene_variant	MODIFIER	HG02280.hp1 HG02717.hp1 HG03516.hp1 HG02280.hp1 HG02717.hp1 HG03516.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0005 a0001c0001t0005	a0001c0001t0005g0000 a0001c0001t0005g0000	3	418	0.0072	16	c.26 others(27): Show c.2672_*2673insATATATATACATATAT	SUMO4	ENSG00000177688.7	transcript	ENST00000326669.6	protein_coding		2074		chr6	TogoVar
SUN3_chr7_47982148_48034107	48026581	A A	AACACACA others(9): Show AACACACACACACACAC	intron_variant intron_variant	MODIFIER	HG02895.hp1 HG02895.hp1	a0005 a0005	a0005c0005 a0005c0005	a0005c0005t0007 a0005c0005t0007	a0005c0005t0007g0303 a0005c0005t0007g0303	1	414	0.0024	16	c.123 others(31): Show c.123-659_123-644dupGTGTGTGTGTGTGTGT	SUN3	ENSG00000164744.14	transcript	ENST00000297325.9	protein_coding	1/9			chr7	TogoVar
SUN3_chr7_47982148_48034107	48031832	G G	GCACACAC others(9): Show GCACACACACACACACA	upstream_gene_variant upstream_gene_variant	MODIFIER	HG03516.hp1 HG03516.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0200 a0001c0001t0001g0200	1	414	0.0024	16	c.-28 others(27): Show c.-2895_-2894insTGTGTGTGTGTGTGTG	SUN3	ENSG00000164744.14	transcript	ENST00000297325.9	protein_coding		2726		chr7	TogoVar
SUN5_chr20_32978775_33009433	33001519	C C	CTTCTTTC others(9): Show CTTCTTTCTTTCTTTCT	intron_variant intron_variant	MODIFIER	HG01106.hp2 HG02056.hp2 HG02074.hp1 others(4): Show HG01106.hp2 HG02056.hp2 HG02074.hp1 NA18990.hp2 NA19002.hp1 NA19066.hp2 NA19085.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0029 a0001c0001t0001g0034 a0001c0001t0001g0159 others(2): Show a0001c0001t0001g0029 a0001c0001t0001g0034 a0001c0001t0001g0159 a0001c0001t0001g0213 a0001c0001t0001g0214	7	382	0.0183	16	c.212 others(31): Show c.212-257_212-242dupAGAAAGAAAGAAAGAA	SUN5	ENSG00000167098.12	transcript	ENST00000356173.8	protein_coding	3/12			chr20	TogoVar
SUN5_chr20_32978775_33009433	33001641	T T	TCCTCCCT others(9): Show TCCTCCCTCCCTCCCTC	intron_variant intron_variant	MODIFIER	HG01109.hp1 HG01243.hp2 HG01433.hp1 HG01109.hp1 HG01243.hp2 HG01433.hp1	a0001 a0002 a0001 a0002	a0001c0001 a0002c0002 a0001c0001 a0002c0002	a0001c0001t0001 a0002c0002t0001 a0001c0001t0001 a0002c0002t0001	a0001c0001t0001g0127 a0001c0001t0001g0277 a0002c0002t0001g0078 a0001c0001t0001g0127 a0001c0001t0001g0277 a0002c0002t0001g0078	3	382	0.0079	16	c.212 others(31): Show c.212-379_212-364dupGAGGGAGGGAGGGAGG	SUN5	ENSG00000167098.12	transcript	ENST00000356173.8	protein_coding	3/12			chr20	TogoVar
SUN5_chr20_32978775_33009433	33001646	C C	CCTCCCTC others(9): Show CCTCCCTCCCTCCCTCA	intron_variant intron_variant	MODIFIER	HG02148.hp1 NA20805.hp2 HG02148.hp1 NA20805.hp2	a0002 a0002	a0002c0002 a0002c0002	a0002c0002t0001 a0002c0002t0001	a0002c0002t0001g0026 a0002c0002t0001g0026	2	382	0.0052	16	c.212 others(31): Show c.212-369_212-368insTGAGGGAGGGAGGGAG	SUN5	ENSG00000167098.12	transcript	ENST00000356173.8	protein_coding	3/12			chr20	TogoVar
SUOX_chr12_55992276_56010525	55996003	A A	ATATATAT others(9): Show ATATATATATATTTTTT	upstream_gene_variant upstream_gene_variant	MODIFIER	HG01516.hp1 HG03017.hp1 HG01516.hp1 HG03017.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0009 a0001c0001t0001g0111 a0001c0001t0001g0009 a0001c0001t0001g0111	2	422	0.0047	16	c.-14 others(27): Show c.-1456_-1455insTATATATATATTTTTT	SUOX	ENSG00000139531.13	transcript	ENST00000266971.8	protein_coding		1272		chr12	TogoVar
SUPT3H_chr6_44821726_45382934	44850745	C C	CATCTATC others(9): Show CATCTATCTATCTATCT	intron_variant intron_variant	MODIFIER	HG01192.hp1 HG02886.hp2 HG02922.hp1 others(1): Show HG01192.hp1 HG02886.hp2 HG02922.hp1 NA19090.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0002 a0001c0001t0003 others(1): Show a0001c0001t0001 a0001c0001t0002 a0001c0001t0003 a0001c0001t0006	a0001c0001t0001g0241 a0001c0001t0002g0037 a0001c0001t0003g0028 others(1): Show a0001c0001t0001g0241 a0001c0001t0002g0037 a0001c0001t0003g0028 a0001c0001t0006g0090	4	262	0.0153	16	c.913 others(35): Show c.913-20904_913-20889dupAGATAGATAGATAGAT	SUPT3H	ENSG00000196284.18	transcript	ENST00000371459.6	protein_coding	10/10			chr6	TogoVar
SUPT3H_chr6_44821726_45382934	44928882	C C	CAAAAAAA others(9): Show CAAAAAAAAAAAAAAAA	intron_variant intron_variant	MODIFIER	HG00438.hp1 HG01069.hp1 HG01074.hp1 others(15): Show HG00438.hp1 HG01069.hp1 HG01074.hp1 HG01109.hp1 HG01261.hp1 HG01993.hp1 HG02602.hp2 HG02922.hp2 HG02976.hp1 HG03540.hp2 NA18950.hp2 NA19004.hp2 NA19011.hp1 NA19063.hp2 NA19064.hp1 NA19085.hp2 NA20129.hp2 NA20905.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0013 a0001c0001t0022 a0001c0001t0001 a0001c0001t0013 a0001c0001t0022	a0001c0001t0001g0062 a0001c0001t0001g0063 a0001c0001t0001g0194 others(15): Show a0001c0001t0001g0062 a0001c0001t0001g0063 a0001c0001t0001g0194 a0001c0001t0001g0196 a0001c0001t0001g0208 a0001c0001t0001g0211 a0001c0001t0001g0217 a0001c0001t0001g0219 a0001c0001t0001g0222 a0001c0001t0001g0225 a0001c0001t0001g0229 a0001c0001t0001g0238 a0001c0001t0001g0240 a0001c0001t0001g0247 a0001c0001t0001g0249 a0001c0001t0001g0254 a0001c0001t0013g0059 a0001c0001t0022g0259	18	262	0.0687	16	c.912 others(33): Show c.912+3755_912+3770dupTTTTTTTTTTTTTTTT	SUPT3H	ENSG00000196284.18	transcript	ENST00000371459.6	protein_coding	10/10			chr6	TogoVar
SUPT3H_chr6_44821726_45382934	44928882	C C	CAGAAAAA others(9): Show CAGAAAAAAAAAAAAAA	intron_variant intron_variant	MODIFIER	HG01934.hp1 HG01934.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0248 a0001c0001t0001g0248	1	262	0.0038	16	c.912 others(33): Show c.912+3770_912+3771insTTTTTTTTTTTTTTCT	SUPT3H	ENSG00000196284.18	transcript	ENST00000371459.6	protein_coding	10/10			chr6	TogoVar
SUPT3H_chr6_44821726_45382934	44944762	C C	CAAAAAAA others(9): Show CAAAAAAAAAAAAAAAA	intron_variant intron_variant	MODIFIER	HG01891.hp1 HG01891.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0005 a0001c0001t0005	a0001c0001t0005g0043 a0001c0001t0005g0043	1	262	0.0038	16	c.801 others(33): Show c.801+8532_801+8547dupTTTTTTTTTTTTTTTT	SUPT3H	ENSG00000196284.18	transcript	ENST00000371459.6	protein_coding	9/10			chr6	TogoVar
SUPT3H_chr6_44821726_45382934	44985212	T T	TAAAATAA others(9): Show TAAAATAAAATAAAATA	intron_variant intron_variant	MODIFIER	HG02155.hp1 HG02155.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0093 a0001c0001t0001g0093	1	262	0.0038	16	c.504 others(35): Show c.504+18440_504+18441insTATTTTATTTTATTTT	SUPT3H	ENSG00000196284.18	transcript	ENST00000371459.6	protein_coding	6/10			chr6	TogoVar
SUPT3H_chr6_44821726_45382934	45050278	A A	AGTGTGTG others(9): Show AGTGTGTGTGTGTGTGT	intron_variant intron_variant	MODIFIER	HG02109.hp2 HG02602.hp1 HG02922.hp1 others(3): Show HG02109.hp2 HG02602.hp1 HG02922.hp1 HG03491.hp2 HG03492.hp1 HG04199.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0003 a0001c0001t0009 a0001c0001t0003 a0001c0001t0009	a0001c0001t0003g0020 a0001c0001t0003g0021 a0001c0001t0003g0028 others(3): Show a0001c0001t0003g0020 a0001c0001t0003g0021 a0001c0001t0003g0028 a0001c0001t0009g0055 a0001c0001t0009g0056 a0001c0001t0009g0057	6	262	0.0229	16	c.187 others(35): Show c.187-29662_187-29647dupACACACACACACACAC	SUPT3H	ENSG00000196284.18	transcript	ENST00000371459.6	protein_coding	3/10			chr6	TogoVar
SUPT3H_chr6_44821726_45382934	45113827	C C	CAAAAAAA others(9): Show CAAAAAAAAAAAAAAAA	intron_variant intron_variant	MODIFIER	HG02976.hp1 HG02976.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0022 a0001c0001t0022	a0001c0001t0022g0259 a0001c0001t0022g0259	1	262	0.0038	16	c.102 others(33): Show c.102-7837_102-7822dupTTTTTTTTTTTTTTTT	SUPT3H	ENSG00000196284.18	transcript	ENST00000371459.6	protein_coding	2/10			chr6	TogoVar
SUPT3H_chr6_44821726_45382934	45230660	G G	GCCTATAT others(9): Show GCCTATATATATATATA	intron_variant intron_variant	MODIFIER	HG00741.hp2 HG01261.hp1 HG01496.hp1 others(12): Show HG00741.hp2 HG01261.hp1 HG01496.hp1 HG01891.hp2 HG02015.hp1 HG02602.hp2 HG02622.hp2 HG03710.hp2 NA18906.hp1 NA18949.hp1 NA19004.hp2 NA19090.hp2 NA20129.hp2 NA20752.hp1 NA20905.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0008 a0001c0001t0020 a0001c0001t0001 a0001c0001t0008 a0001c0001t0020	a0001c0001t0001g0194 a0001c0001t0001g0207 a0001c0001t0001g0229 others(12): Show a0001c0001t0001g0194 a0001c0001t0001g0207 a0001c0001t0001g0229 a0001c0001t0001g0230 a0001c0001t0001g0233 a0001c0001t0001g0238 a0001c0001t0001g0241 a0001c0001t0001g0249 a0001c0001t0001g0254 a0001c0001t0001g0257 a0001c0001t0001g0258 a0001c0001t0008g0085 a0001c0001t0008g0086 a0001c0001t0008g0087 a0001c0001t0020g0246	15	262	0.0573	16	c.102 others(37): Show c.102-124655_102-124654insTATATATATATATAGG	SUPT3H	ENSG00000196284.18	transcript	ENST00000371459.6	protein_coding	2/10			chr6	TogoVar
SUPT3H_chr6_44821726_45382934	45253848	C C	CATATATA others(9): Show CATATATATATATATAT	intron_variant intron_variant	MODIFIER	HG00423.hp1 HG01255.hp1 HG01346.hp1 others(8): Show HG00423.hp1 HG01255.hp1 HG01346.hp1 HG01934.hp1 HG02056.hp2 HG02818.hp2 HG02970.hp2 HG03540.hp2 NA18906.hp1 NA20129.hp2 NA20300.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0006 a0001c0001t0008 others(1): Show a0001c0001t0001 a0001c0001t0006 a0001c0001t0008 a0001c0001t0013	a0001c0001t0001g0070 a0001c0001t0001g0089 a0001c0001t0001g0195 others(8): Show a0001c0001t0001g0070 a0001c0001t0001g0089 a0001c0001t0001g0195 a0001c0001t0001g0202 a0001c0001t0001g0227 a0001c0001t0001g0229 a0001c0001t0001g0248 a0001c0001t0006g0002 a0001c0001t0006g0005 a0001c0001t0008g0087 a0001c0001t0013g0059	11	262	0.0420	16	c.101 others(37): Show c.101+111337_101+111352dupATATATATATATATAT	SUPT3H	ENSG00000196284.18	transcript	ENST00000371459.6	protein_coding	2/10			chr6	TogoVar
SUPT3H_chr6_44821726_45382934	45296185	T T	TACACACA others(9): Show TACACACACACACACAC	intron_variant intron_variant	MODIFIER	HG00733.hp1 HG01069.hp2 HG01071.hp2 others(15): Show HG00733.hp1 HG01069.hp2 HG01071.hp2 HG01074.hp2 HG01106.hp2 HG01192.hp2 HG01257.hp2 HG01261.hp2 HG01346.hp2 HG01361.hp1 HG01496.hp2 HG02074.hp2 HG03209.hp1 HG04115.hp1 NA19004.hp1 NA19090.hp1 NA20805.hp2 NA20905.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0002 a0001c0001t0004 a0001c0001t0007 others(2): Show a0001c0001t0002 a0001c0001t0004 a0001c0001t0007 a0001c0001t0010 a0001c0001t0015	a0001c0001t0002g0053 a0001c0001t0004g0167 a0001c0001t0004g0168 others(15): Show a0001c0001t0002g0053 a0001c0001t0004g0167 a0001c0001t0004g0168 a0001c0001t0004g0169 a0001c0001t0004g0170 a0001c0001t0004g0175 a0001c0001t0004g0176 a0001c0001t0004g0178 a0001c0001t0004g0179 a0001c0001t0004g0181 a0001c0001t0004g0184 a0001c0001t0004g0185 a0001c0001t0004g0186 a0001c0001t0004g0187 a0001c0001t0004g0189 a0001c0001t0007g0052 a0001c0001t0010g0191 a0001c0001t0015g0001	18	262	0.0687	16	c.101 others(35): Show c.101+69000_101+69015dupGTGTGTGTGTGTGTGT	SUPT3H	ENSG00000196284.18	transcript	ENST00000371459.6	protein_coding	2/10			chr6	TogoVar
SUPT3H_chr6_44821726_45382934	45315922	C C	CAGATAGA others(9): Show CAGATAGATAGATAGAT	intron_variant intron_variant	MODIFIER	HG02572.hp1 HG02602.hp1 HG02572.hp1 HG02602.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0009 a0001c0001t0001 a0001c0001t0009	a0001c0001t0001g0065 a0001c0001t0009g0055 a0001c0001t0001g0065 a0001c0001t0009g0055	2	262	0.0076	16	c.101 others(35): Show c.101+49263_101+49278dupATCTATCTATCTATCT	SUPT3H	ENSG00000196284.18	transcript	ENST00000371459.6	protein_coding	2/10			chr6	TogoVar
SUPT3H_chr6_44821726_45382934	45348512	C C	CAAAAAAA others(9): Show CAAAAAAAAAAAAAAAA	intron_variant intron_variant	MODIFIER	HG02717.hp2 HG02976.hp1 HG02717.hp2 HG02976.hp1	a0001 a0003 a0001 a0003	a0001c0001 a0003c0005 a0001c0001 a0003c0005	a0001c0001t0022 a0003c0005t0021 a0001c0001t0022 a0003c0005t0021	a0001c0001t0022g0259 a0003c0005t0021g0260 a0001c0001t0022g0259 a0003c0005t0021g0260	2	262	0.0076	16	c.101 others(35): Show c.101+16688_101+16689insTTTTTTTTTTTTTTTT	SUPT3H	ENSG00000196284.18	transcript	ENST00000371459.6	protein_coding	2/10			chr6	TogoVar
SUPT4H1_chr17_58340178_58357201	58350510	C C	CAAATAAA others(9): Show CAAATAAATAAATAAAT	intron_variant intron_variant	MODIFIER	HG00642.hp2 HG01884.hp2 HG02486.hp1 others(17): Show HG00642.hp2 HG01884.hp2 HG02486.hp1 HG02486.hp2 HG02615.hp1 HG02630.hp2 HG02717.hp1 HG03579.hp1 NA18906.hp1 NA18941.hp2 NA18944.hp2 NA18956.hp1 NA18959.hp2 NA18960.hp1 NA19009.hp1 NA19009.hp2 NA19086.hp2 NA19091.hp2 NA20129.hp2 NA20752.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0002 a0001c0001t0003 a0001c0001t0004 others(1): Show a0001c0001t0002 a0001c0001t0003 a0001c0001t0004 a0001c0001t0005	a0001c0001t0002g0009 a0001c0001t0002g0046 a0001c0001t0002g0062 others(5): Show a0001c0001t0002g0009 a0001c0001t0002g0046 a0001c0001t0002g0062 a0001c0001t0003g0028 a0001c0001t0003g0038 a0001c0001t0004g0054 a0001c0001t0005g0024 a0001c0001t0005g0039	20	438	0.0457	16	c.176 others(31): Show c.176+876_176+891dupATTTATTTATTTATTT	SUPT4H1	ENSG00000213246.7	transcript	ENST00000225504.8	protein_coding	2/4			chr17	TogoVar
SUPT5H_chr19_39440582_39481670	39445081	C C	CAAAAAAA others(9): Show CAAAAAAAAAAAAAAAA	upstream_gene_variant upstream_gene_variant	MODIFIER	HG01928.hp1 HG02109.hp2 HG02258.hp1 others(5): Show HG01928.hp1 HG02109.hp2 HG02258.hp1 HG02647.hp1 HG02922.hp1 NA18951.hp1 NA18967.hp1 NA19043.hp2	a0001 a0001	a0001c0001 a0001c0003 a0001c0001 a0001c0003	a0001c0001t0001 a0001c0003t0001 a0001c0001t0001 a0001c0003t0001	a0001c0001t0001g0130 a0001c0001t0001g0132 a0001c0001t0001g0133 others(4): Show a0001c0001t0001g0130 a0001c0001t0001g0132 a0001c0001t0001g0133 a0001c0001t0001g0145 a0001c0003t0001g0004 a0001c0003t0001g0153 a0001c0003t0001g0267	8	378	0.0212	16	c.-64 others(25): Show c.-644_-643insAAAAAAAAAAAAAAAA	SUPT5H	ENSG00000196235.14	transcript	ENST00000432763.7	protein_coding		500		chr19	TogoVar
SUPT6H_chr17_28657205_28707679	28663828	A A	ATTTTTTT others(9): Show ATTTTTTTTTTTTTTTT	intron_variant intron_variant	MODIFIER	HG01069.hp1 HG03239.hp2 NA18957.hp2 others(1): Show HG01069.hp1 HG03239.hp2 NA18957.hp2 NA21309.hp2	a0001 a0001	a0001c0001 a0001c0003 a0001c0001 a0001c0003	a0001c0001t0002 a0001c0003t0001 a0001c0001t0002 a0001c0003t0001	a0001c0001t0002g0056 a0001c0001t0002g0057 a0001c0001t0002g0058 others(1): Show a0001c0001t0002g0056 a0001c0001t0002g0057 a0001c0001t0002g0058 a0001c0003t0001g0019	4	236	0.0170	16	c.-32 others(33): Show c.-32+1488_-32+1503dupTTTTTTTTTTTTTTTT	SUPT6H	ENSG00000109111.15	transcript	ENST00000314616.11	protein_coding	1/36		INFO_REALIGN_3_PRIME	chr17	TogoVar
SUPT6H_chr17_28657205_28707679	28667403	G G	GTATATAT others(9): Show GTATATATATATATATA	intron_variant intron_variant	MODIFIER	HG00408.hp1 HG00597.hp1 HG00408.hp1 HG00597.hp1	a0001 a0001	a0001c0002 a0001c0003 a0001c0002 a0001c0003	a0001c0002t0001 a0001c0003t0001 a0001c0002t0001 a0001c0003t0001	a0001c0002t0001g0067 a0001c0003t0001g0150 a0001c0002t0001g0067 a0001c0003t0001g0150	2	236	0.0085	16	c.-32 others(33): Show c.-32+5062_-32+5063insATATATATATATATAT	SUPT6H	ENSG00000109111.15	transcript	ENST00000314616.11	protein_coding	1/36		INFO_REALIGN_3_PRIME	chr17	TogoVar
SUPV3L1_chr10_69175234_69214093	69184616	T T	TACACACA others(9): Show TACACACACACACACAC	intron_variant intron_variant	MODIFIER	HG01257.hp1 HG01258.hp1 HG02717.hp2 others(1): Show HG01257.hp1 HG01258.hp1 HG02717.hp2 HG02970.hp2	a0001 a0002 a0001 a0002	a0001c0001 a0002c0003 a0001c0001 a0002c0003	a0001c0001t0001 a0002c0003t0001 a0001c0001t0001 a0002c0003t0001	a0001c0001t0001g0028 a0002c0003t0001g0052 a0002c0003t0001g0237 a0001c0001t0001g0028 a0002c0003t0001g0052 a0002c0003t0001g0237	4	354	0.0113	16	c.272 others(33): Show c.272-1350_272-1335dupACACACACACACACAC	SUPV3L1	ENSG00000156502.14	transcript	ENST00000359655.9	protein_coding	1/14		INFO_REALIGN_3_PRIME	chr10	TogoVar
SUSD1_chr9_112035783_112180297	112036397	A A	ATTTTTTT others(9): Show ATTTTTTTTTTTTTTTT	downstream_gene_variant downstream_gene_variant	MODIFIER	HG03098.hp1 HG03098.hp1	a0001 a0001	a0001c0004 a0001c0004	a0001c0004t0003 a0001c0004t0003	a0001c0004t0003g0012 a0001c0004t0003g0012	1	338	0.0030	16	c.50 others(27): Show c.5094_*5095insAAAAAAAAAAAAAAAA	SUSD1	ENSG00000106868.17	transcript	ENST00000374270.8	protein_coding		4385		chr9	TogoVar
SUSD1_chr9_112035783_112180297	112040425	C C	CAAAAAAA others(9): Show CAAAAAAAAAAAAAAAA	downstream_gene_variant downstream_gene_variant	MODIFIER	HG00280.hp2 HG00609.hp1 HG00741.hp1 others(20): Show HG00280.hp2 HG00609.hp1 HG00741.hp1 HG00741.hp2 HG01071.hp1 HG01192.hp2 HG01257.hp2 HG01258.hp2 HG01993.hp2 HG02922.hp2 HG02970.hp1 HG03209.hp1 HG03579.hp2 HG03704.hp1 HG03710.hp1 HG04204.hp2 NA18950.hp1 NA19060.hp1 NA19063.hp2 NA19072.hp2 NA19088.hp2 NA20752.hp1 NA20805.hp1	a0001 a0001	a0001c0001 a0001c0005 a0001c0001 a0001c0005	a0001c0001t0001 a0001c0005t0001 a0001c0001t0001 a0001c0005t0001	a0001c0001t0001g0030 a0001c0001t0001g0033 a0001c0001t0001g0053 others(20): Show a0001c0001t0001g0030 a0001c0001t0001g0033 a0001c0001t0001g0053 a0001c0001t0001g0067 a0001c0001t0001g0078 a0001c0001t0001g0128 a0001c0001t0001g0131 a0001c0001t0001g0132 a0001c0001t0001g0136 a0001c0001t0001g0140 a0001c0001t0001g0146 a0001c0001t0001g0152 a0001c0001t0001g0179 a0001c0001t0001g0214 a0001c0001t0001g0253 a0001c0001t0001g0260 a0001c0001t0001g0268 a0001c0001t0001g0273 a0001c0001t0001g0290 a0001c0001t0001g0292 a0001c0001t0001g0293 a0001c0001t0001g0309 a0001c0005t0001g0168	23	338	0.0681	16	c.10 others(27): Show c.1066_*1067insTTTTTTTTTTTTTTTT	SUSD1	ENSG00000106868.17	transcript	ENST00000374270.8	protein_coding		357		chr9	TogoVar
SUSD1_chr9_112035783_112180297	112100857	G G	GACACACA others(9): Show GACACACACACACACAC	intron_variant intron_variant	MODIFIER	HG01255.hp2 HG02809.hp1 HG03486.hp1 others(2): Show HG01255.hp2 HG02809.hp1 HG03486.hp1 HG03669.hp2 NA19056.hp2	a0001 a0001	a0001c0001 a0001c0004 a0001c0005 a0001c0001 a0001c0004 a0001c0005	a0001c0001t0001 a0001c0004t0001 a0001c0004t0003 others(1): Show a0001c0001t0001 a0001c0004t0001 a0001c0004t0003 a0001c0005t0001	a0001c0001t0001g0041 a0001c0001t0001g0101 a0001c0004t0001g0142 others(2): Show a0001c0001t0001g0041 a0001c0001t0001g0101 a0001c0004t0001g0142 a0001c0004t0003g0160 a0001c0005t0001g0148	5	338	0.0148	16	c.128 others(35): Show c.1281+1303_1281+1318dupGTGTGTGTGTGTGTGT	SUSD1	ENSG00000106868.17	transcript	ENST00000374270.8	protein_coding	9/16			chr9	TogoVar
SUSD1_chr9_112035783_112180297	112138240	T T	TATATATG others(9): Show TATATATGTATATACAC	intron_variant intron_variant	MODIFIER	HG02895.hp1 HG02897.hp2 NA20129.hp1 HG02895.hp1 HG02897.hp2 NA20129.hp1	a0002 a0002	a0002c0007 a0002c0007	a0002c0007t0001 a0002c0007t0004 a0002c0007t0001 a0002c0007t0004	a0002c0007t0001g0198 a0002c0007t0001g0199 a0002c0007t0004g0218 a0002c0007t0001g0198 a0002c0007t0001g0199 a0002c0007t0004g0218	3	338	0.0089	16	c.706 others(33): Show c.706+4079_706+4080insGTGTATATACATATAT	SUSD1	ENSG00000106868.17	transcript	ENST00000374270.8	protein_coding	5/16			chr9	TogoVar
SUSD1_chr9_112035783_112180297	112165922	A A	AGAAAGAA others(9): Show AGAAAGAAAGAAAGAAG	intron_variant intron_variant	MODIFIER	HG00323.hp2 HG01099.hp1 HG01168.hp2 others(11): Show HG00323.hp2 HG01099.hp1 HG01168.hp2 HG01192.hp1 HG01884.hp1 HG02056.hp1 HG02165.hp2 HG02818.hp2 HG02895.hp2 HG02922.hp2 HG02965.hp2 HG03654.hp1 HG03669.hp2 NA19063.hp1	a0001 a0008 a0001 a0008	a0001c0001 a0001c0002 a0001c0003 others(2): Show a0001c0001 a0001c0002 a0001c0003 a0001c0005 a0008c0015	a0001c0001t0001 a0001c0001t0003 a0001c0001t0004 others(4): Show a0001c0001t0001 a0001c0001t0003 a0001c0001t0004 a0001c0002t0004 a0001c0003t0002 a0001c0005t0003 a0008c0015t0001	a0001c0001t0001g0080 a0001c0001t0001g0081 a0001c0001t0001g0086 others(11): Show a0001c0001t0001g0080 a0001c0001t0001g0081 a0001c0001t0001g0086 a0001c0001t0001g0101 a0001c0001t0001g0116 a0001c0001t0001g0119 a0001c0001t0001g0179 a0001c0001t0003g0117 a0001c0001t0003g0225 a0001c0001t0004g0115 a0001c0002t0004g0087 a0001c0003t0002g0176 a0001c0005t0003g0103 a0008c0015t0001g0085	14	338	0.0414	16	c.104 others(33): Show c.104-8310_104-8309insCTTCTTTCTTTCTTTC	SUSD1	ENSG00000106868.17	transcript	ENST00000374270.8	protein_coding	1/16			chr9	TogoVar
SUSD1_chr9_112035783_112180297	112165927	A A	AAAGAAAG others(9): Show AAAGAAAGAAAGAAGAG	intron_variant intron_variant	MODIFIER	NA20905.hp1 NA20905.hp1	a0012 a0012	a0012c0012 a0012c0012	a0012c0012t0001 a0012c0012t0001	a0012c0012t0001g0296 a0012c0012t0001g0296	1	338	0.0030	16	c.104 others(33): Show c.104-8315_104-8314insCTCTTCTTTCTTTCTT	SUSD1	ENSG00000106868.17	transcript	ENST00000374270.8	protein_coding	1/16			chr9	TogoVar

Search by Variant

Search

Search Results