Joint Open Genome and Omics Platform (JoGo)

Search by Variant

Regionname

Chr

Snpeff genename

Sampleids

Snpeff haplotype class

Snpeff annotation impact

Snpeff annotation impact detail

Hapid

Samplehapid

No_hapid

No_samplehapid

Start

End

Minac

Maxac

Minlen

Maxlen

Sort By

Order by

regionname	pos	ref	alt	annotation	impact	samples	ahapids	chapids	thapids	thapids	ac	an	af	len	hgvs_c	genename	geneid	featuretype	featureid	transcript_biotype	rank	distance	status	chr	external
TCF4_chr18_55217185_55593192	55365156	A A	AATATATA others(9): Show AATATATATATATATAT	intron_variant intron_variant	MODIFIER	HG02523.hp1 HG02523.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0080 a0001c0001t0001g0080	1	122	0.0082	16	c.370 others(35): Show c.370-14169_370-14154dupATATATATATATATAT	TCF4	ENSG00000196628.20	transcript	ENST00000354452.8	protein_coding	6/19			chr18	TogoVar
TCF4_chr18_55217185_55593192	55399853	A A	ATCTCTCT others(9): Show ATCTCTCTCTCTCTCTC	intron_variant intron_variant	MODIFIER	HG01175.hp2 HG01175.hp2	a0001 a0001	a0001c0002 a0001c0002	a0001c0002t0002 a0001c0002t0002	a0001c0002t0002g0114 a0001c0002t0002g0114	1	122	0.0082	16	c.369 others(33): Show c.369+3585_369+3600dupGAGAGAGAGAGAGAGA	TCF4	ENSG00000196628.20	transcript	ENST00000354452.8	protein_coding	6/19			chr18	TogoVar
TCF4_chr18_55217185_55593192	55426099	T T	TTATATAT others(9): Show TTATATATATATATATA	intron_variant intron_variant	MODIFIER	HG06807.hp2 HG06807.hp2	a0001 a0001	a0001c0002 a0001c0002	a0001c0002t0040 a0001c0002t0040	a0001c0002t0040g0029 a0001c0002t0040g0029	1	122	0.0082	16	c.305 others(35): Show c.305-22597_305-22582dupTATATATATATATATA	TCF4	ENSG00000196628.20	transcript	ENST00000354452.8	protein_coding	5/19			chr18	TogoVar
TCF4_chr18_55217185_55593192	55434763	C C	CGTGTGTG others(9): Show CGTGTGTGTGTGTGTGT	intron_variant intron_variant	MODIFIER	HG00323.hp1 HG00438.hp1 HG00609.hp2 others(11): Show HG00323.hp1 HG00438.hp1 HG00609.hp2 HG01081.hp1 HG01099.hp2 HG01175.hp2 HG02040.hp2 HG02165.hp2 HG02523.hp2 HG03486.hp1 HG03579.hp1 HG03688.hp1 HG03704.hp2 NA19012.hp2	a0001 a0001	a0001c0001 a0001c0002 a0001c0001 a0001c0002	a0001c0001t0001 a0001c0001t0003 a0001c0001t0007 others(6): Show a0001c0001t0001 a0001c0001t0003 a0001c0001t0007 a0001c0001t0015 a0001c0001t0023 a0001c0001t0026 a0001c0002t0002 a0001c0002t0004 a0001c0002t0034	a0001c0001t0001g0059 a0001c0001t0001g0061 a0001c0001t0001g0074 others(11): Show a0001c0001t0001g0059 a0001c0001t0001g0061 a0001c0001t0001g0074 a0001c0001t0001g0095 a0001c0001t0001g0097 a0001c0001t0003g0011 a0001c0001t0003g0096 a0001c0001t0007g0072 a0001c0001t0015g0001 a0001c0001t0023g0032 a0001c0001t0026g0069 a0001c0002t0002g0114 a0001c0002t0004g0028 a0001c0002t0034g0075	14	122	0.1148	16	c.304 others(35): Show c.304+26240_304+26255dupACACACACACACACAC	TCF4	ENSG00000196628.20	transcript	ENST00000354452.8	protein_coding	5/19			chr18	TogoVar
TCF4_chr18_55217185_55593192	55494157	G G	GACACACA others(9): Show GACACACACACACACAC	intron_variant intron_variant	MODIFIER	HG03486.hp1 HG03579.hp2 NA19030.hp1 others(1): Show HG03486.hp1 HG03579.hp2 NA19030.hp1 NA20129.hp1	a0001 a0001	a0001c0001 a0001c0002 a0001c0001 a0001c0002	a0001c0001t0008 a0001c0001t0010 a0001c0002t0002 others(1): Show a0001c0001t0008 a0001c0001t0010 a0001c0002t0002 a0001c0002t0034	a0001c0001t0008g0071 a0001c0001t0010g0068 a0001c0002t0002g0076 others(1): Show a0001c0001t0008g0071 a0001c0001t0010g0068 a0001c0002t0002g0076 a0001c0002t0034g0075	4	122	0.0328	16	c.146 others(35): Show c.146-30036_146-30021dupGTGTGTGTGTGTGTGT	TCF4	ENSG00000196628.20	transcript	ENST00000354452.8	protein_coding	3/19			chr18	TogoVar
TCF7L1_chr2_85128392_85315387	85153340	A A	ATTTTTTT others(9): Show ATTTTTTTTTTTTTTTT	intron_variant intron_variant	MODIFIER	HG02257.hp1 HG03130.hp2 HG02257.hp1 HG03130.hp2	a0001 a0011 a0001 a0011	a0001c0001 a0011c0015 a0001c0001 a0011c0015	a0001c0001t0001 a0011c0015t0002 a0001c0001t0001 a0011c0015t0002	a0001c0001t0001g0163 a0011c0015t0002g0164 a0001c0001t0001g0163 a0011c0015t0002g0164	2	236	0.0085	16	c.441 others(35): Show c.441+18894_441+18909dupTTTTTTTTTTTTTTTT	TCF7L1	ENSG00000152284.5	transcript	ENST00000282111.4	protein_coding	3/11		INFO_REALIGN_3_PRIME	chr2	TogoVar
TCF7L1_chr2_85128392_85315387	85168192	A A	AACACACA others(9): Show AACACACACACACACAC	intron_variant intron_variant	MODIFIER	HG02647.hp1 HG02647.hp2 HG02647.hp1 HG02647.hp2	a0002 a0005 a0002 a0005	a0002c0008 a0005c0006 a0002c0008 a0005c0006	a0002c0008t0002 a0005c0006t0002 a0002c0008t0002 a0005c0006t0002	a0002c0008t0002g0029 a0005c0006t0002g0108 a0002c0008t0002g0029 a0005c0006t0002g0108	2	236	0.0085	16	c.441 others(35): Show c.441+33758_441+33773dupCACACACACACACACA	TCF7L1	ENSG00000152284.5	transcript	ENST00000282111.4	protein_coding	3/11		INFO_REALIGN_3_PRIME	chr2	TogoVar
TCF7L1_chr2_85128392_85315387	85218236	T T	TTTTATTT others(9): Show TTTTATTTATTTATTTA	intron_variant intron_variant	MODIFIER	HG00735.hp1 HG02258.hp1 HG02559.hp1 others(5): Show HG00735.hp1 HG02258.hp1 HG02559.hp1 HG02723.hp1 HG02809.hp1 HG03130.hp1 HG03486.hp2 NA19043.hp1	a0001 a0002 a0005 a0001 a0002 a0005	a0001c0001 a0002c0002 a0002c0003 others(1): Show a0001c0001 a0002c0002 a0002c0003 a0005c0006	a0001c0001t0001 a0001c0001t0002 a0002c0002t0001 others(4): Show a0001c0001t0001 a0001c0001t0002 a0002c0002t0001 a0002c0002t0002 a0002c0002t0008 a0002c0003t0002 a0005c0006t0010	a0001c0001t0001g0234 a0001c0001t0002g0194 a0001c0001t0002g0195 others(5): Show a0001c0001t0001g0234 a0001c0001t0002g0194 a0001c0001t0002g0195 a0002c0002t0001g0061 a0002c0002t0002g0062 a0002c0002t0008g0059 a0002c0003t0002g0197 a0005c0006t0010g0233	8	236	0.0339	16	c.442 others(35): Show c.442-65239_442-65224dupATTTATTTATTTATTT	TCF7L1	ENSG00000152284.5	transcript	ENST00000282111.4	protein_coding	3/11		INFO_REALIGN_3_PRIME	chr2	TogoVar
TCF7L1_chr2_85128392_85315387	85298191	C C	CAAAAAAA others(9): Show CAAAAAAAAAAAAAAAA	intron_variant intron_variant	MODIFIER	HG02148.hp2 HG02257.hp1 HG02922.hp2 HG02148.hp2 HG02257.hp1 HG02922.hp2	a0001 a0003 a0011 a0001 a0003 a0011	a0001c0001 a0003c0004 a0011c0015 a0001c0001 a0003c0004 a0011c0015	a0001c0001t0002 a0003c0004t0002 a0011c0015t0002 a0001c0001t0002 a0003c0004t0002 a0011c0015t0002	a0001c0001t0002g0106 a0003c0004t0002g0123 a0011c0015t0002g0164 a0001c0001t0002g0106 a0003c0004t0002g0123 a0011c0015t0002g0164	3	236	0.0127	16	c.526 others(33): Show c.526-4278_526-4277insAAAAAAAAAAAAAAAA	TCF7L1	ENSG00000152284.5	transcript	ENST00000282111.4	protein_coding	4/11		INFO_REALIGN_3_PRIME	chr2	TogoVar
TCF7L1_chr2_85128392_85315387	85299860	A A	AACACACA others(9): Show AACACACACACACACAC	intron_variant intron_variant	MODIFIER	HG01261.hp1 HG02135.hp2 HG03540.hp2 others(2): Show HG01261.hp1 HG02135.hp2 HG03540.hp2 HG04115.hp2 NA19000.hp2	a0001 a0002 a0001 a0002	a0001c0001 a0002c0002 a0001c0001 a0002c0002	a0001c0001t0001 a0002c0002t0001 a0002c0002t0003 a0001c0001t0001 a0002c0002t0001 a0002c0002t0003	a0001c0001t0001g0135 a0001c0001t0001g0201 a0002c0002t0001g0032 others(2): Show a0001c0001t0001g0135 a0001c0001t0001g0201 a0002c0002t0001g0032 a0002c0002t0001g0168 a0002c0002t0003g0083	5	236	0.0212	16	c.526 others(33): Show c.526-2595_526-2580dupACACACACACACACAC	TCF7L1	ENSG00000152284.5	transcript	ENST00000282111.4	protein_coding	4/11		INFO_REALIGN_3_PRIME	chr2	TogoVar
TCF7L1_chr2_85128392_85315387	85308433	C C	CTCCCTCC others(9): Show CTCCCTCCCTTTCTCTT	intron_variant intron_variant	MODIFIER	HG01168.hp1 HG01168.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0005 a0001c0001t0005	a0001c0001t0005g0004 a0001c0001t0005g0004	1	236	0.0042	16	c.133 others(33): Show c.1334-586_1334-571dupTTCTCTTTCCCTCCCT	TCF7L1	ENSG00000152284.5	transcript	ENST00000282111.4	protein_coding	11/11		INFO_REALIGN_3_PRIME	chr2	TogoVar
TCF7L2_chr10_112945247_113172678	112961254	A A	ACCGCCCC others(9): Show ACCGCCCCCCCCCCCCC	intron_variant intron_variant	MODIFIER	HG02572.hp2 HG02572.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0099 a0001c0001t0001g0099	1	200	0.0050	16	c.382 others(33): Show c.382-3300_382-3299insGCCCCCCCCCCCCCCC	TCF7L2	ENSG00000148737.18	transcript	ENST00000355995.9	protein_coding	3/14		INFO_REALIGN_3_PRIME	chr10	TogoVar
TCF7L2_chr10_112945247_113172678	112966184	T T	TTATATAT others(9): Show TTATATATATTTATATA	intron_variant intron_variant	MODIFIER	HG00140.hp1 HG00438.hp1 HG00597.hp1 others(12): Show HG00140.hp1 HG00438.hp1 HG00597.hp1 HG00741.hp1 HG01123.hp1 HG01256.hp1 HG01258.hp2 HG01358.hp1 HG02055.hp1 HG02300.hp1 HG02717.hp1 NA18906.hp1 NA19030.hp2 NA19085.hp1 NA20300.hp2	a0001 a0002 a0005 a0001 a0002 a0005	a0001c0001 a0002c0002 a0005c0011 a0001c0001 a0002c0002 a0005c0011	a0001c0001t0001 a0001c0001t0004 a0001c0001t0009 others(4): Show a0001c0001t0001 a0001c0001t0004 a0001c0001t0009 a0001c0001t0011 a0001c0001t0042 a0002c0002t0001 a0005c0011t0002	a0001c0001t0001g0046 a0001c0001t0001g0047 a0001c0001t0001g0048 others(12): Show a0001c0001t0001g0046 a0001c0001t0001g0047 a0001c0001t0001g0048 a0001c0001t0001g0058 a0001c0001t0001g0078 a0001c0001t0001g0191 a0001c0001t0001g0195 a0001c0001t0004g0054 a0001c0001t0004g0122 a0001c0001t0009g0057 a0001c0001t0011g0169 a0001c0001t0011g0183 a0001c0001t0042g0106 a0002c0002t0001g0200 a0005c0011t0002g0105	15	200	0.0750	16	c.450 others(33): Show c.450+1569_450+1570insTTATATATATATATAT	TCF7L2	ENSG00000148737.18	transcript	ENST00000355995.9	protein_coding	4/14		INFO_REALIGN_3_PRIME	chr10	TogoVar
TCF7L2_chr10_112945247_113172678	112966184	T T	TTATATTT others(9): Show TTATATTTATATATATA	intron_variant intron_variant	MODIFIER	NA18906.hp2 NA18906.hp2	a0001 a0001	a0001c0005 a0001c0005	a0001c0005t0005 a0001c0005t0005	a0001c0005t0005g0138 a0001c0005t0005g0138	1	200	0.0050	16	c.450 others(33): Show c.450+1565_450+1566insTTATATATATATATAT	TCF7L2	ENSG00000148737.18	transcript	ENST00000355995.9	protein_coding	4/14		INFO_REALIGN_3_PRIME	chr10	TogoVar
TCF7L2_chr10_112945247_113172678	112985860	T T	TTGTGTGT others(9): Show TTGTGTGTGTGTGTGTG	intron_variant intron_variant	MODIFIER	HG01255.hp1 HG01255.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0044 a0001c0001t0044	a0001c0001t0044g0164 a0001c0001t0044g0164	1	200	0.0050	16	c.450 others(35): Show c.450+21253_450+21268dupTGTGTGTGTGTGTGTG	TCF7L2	ENSG00000148737.18	transcript	ENST00000355995.9	protein_coding	4/14		INFO_REALIGN_3_PRIME	chr10	TogoVar
TCF7L2_chr10_112945247_113172678	113070269	T T	TTATATAT others(9): Show TTATATATATATATATA	intron_variant intron_variant	MODIFIER	HG02572.hp2 HG02572.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0099 a0001c0001t0001g0099	1	200	0.0050	16	c.552 others(35): Show c.552+30149_552+30164dupATATATATATATATAT	TCF7L2	ENSG00000148737.18	transcript	ENST00000355995.9	protein_coding	5/14		INFO_REALIGN_3_PRIME	chr10	TogoVar
TCF7L2_chr10_112945247_113172678	113073099	C C	CGTGTGTG others(9): Show CGTGTGTGTGTGTGTGT	intron_variant intron_variant	MODIFIER	HG02717.hp2 HG02896.hp1 HG03471.hp1 HG02717.hp2 HG02896.hp1 HG03471.hp1	a0001 a0003 a0001 a0003	a0001c0001 a0003c0003 a0001c0001 a0003c0003	a0001c0001t0001 a0001c0001t0031 a0003c0003t0035 a0001c0001t0001 a0001c0001t0031 a0003c0003t0035	a0001c0001t0001g0079 a0001c0001t0031g0014 a0003c0003t0035g0011 a0001c0001t0001g0079 a0001c0001t0031g0014 a0003c0003t0035g0011	3	200	0.0150	16	c.552 others(35): Show c.552+32989_552+33004dupTGTGTGTGTGTGTGTG	TCF7L2	ENSG00000148737.18	transcript	ENST00000355995.9	protein_coding	5/14		INFO_REALIGN_3_PRIME	chr10	TogoVar
TCF7L2_chr10_112945247_113172678	113073129	T T	TGTGTGTG others(9): Show TGTGTGTGTGTGTGAGA	intron_variant intron_variant	MODIFIER	HG00099.hp2 HG00140.hp1 HG00323.hp1 others(17): Show HG00099.hp2 HG00140.hp1 HG00323.hp1 HG00408.hp2 HG00438.hp2 HG00735.hp2 HG00738.hp2 HG01123.hp1 HG01175.hp2 HG01346.hp2 HG01358.hp2 HG01433.hp2 HG01515.hp2 HG02970.hp2 HG03669.hp1 HG03942.hp2 HG04115.hp1 NA19010.hp2 NA19070.hp1 NA19070.hp2	a0001 a0002 a0005 others(1): Show a0001 a0002 a0005 a0008	a0001c0001 a0002c0002 a0005c0011 others(1): Show a0001c0001 a0002c0002 a0005c0011 a0008c0010	a0001c0001t0001 a0001c0001t0002 a0001c0001t0003 others(10): Show a0001c0001t0001 a0001c0001t0002 a0001c0001t0003 a0001c0001t0004 a0001c0001t0007 a0001c0001t0025 a0001c0001t0039 a0001c0001t0047 a0002c0002t0001 a0002c0002t0003 a0002c0002t0018 a0005c0011t0002 a0008c0010t0002	a0001c0001t0001g0019 a0001c0001t0001g0044 a0001c0001t0001g0056 others(17): Show a0001c0001t0001g0019 a0001c0001t0001g0044 a0001c0001t0001g0056 a0001c0001t0001g0089 a0001c0001t0001g0197 a0001c0001t0002g0102 a0001c0001t0002g0104 a0001c0001t0002g0108 a0001c0001t0003g0186 a0001c0001t0004g0065 a0001c0001t0004g0122 a0001c0001t0007g0085 a0001c0001t0025g0050 a0001c0001t0039g0116 a0001c0001t0047g0070 a0002c0002t0001g0192 a0002c0002t0003g0162 a0002c0002t0018g0022 a0005c0011t0002g0105 a0008c0010t0002g0015	20	200	0.1000	16	c.552 others(35): Show c.552+33004_552+33005insTGTGTGTGTGTGAGAG	TCF7L2	ENSG00000148737.18	transcript	ENST00000355995.9	protein_coding	5/14		INFO_REALIGN_3_PRIME	chr10	TogoVar
TCF7L2_chr10_112945247_113172678	113073129	T T	TGTGTGTG others(9): Show TGTGTGTGTGTGTGTGA	intron_variant intron_variant	MODIFIER	HG01243.hp2 HG01943.hp2 HG02300.hp1 others(3): Show HG01243.hp2 HG01943.hp2 HG02300.hp1 HG02559.hp1 HG03516.hp1 HG04228.hp1	a0001 a0004 a0001 a0004	a0001c0001 a0004c0014 a0001c0001 a0004c0014	a0001c0001t0001 a0001c0001t0005 a0001c0001t0010 others(3): Show a0001c0001t0001 a0001c0001t0005 a0001c0001t0010 a0001c0001t0011 a0001c0001t0033 a0004c0014t0007	a0001c0001t0001g0060 a0001c0001t0005g0188 a0001c0001t0010g0127 others(3): Show a0001c0001t0001g0060 a0001c0001t0005g0188 a0001c0001t0010g0127 a0001c0001t0011g0183 a0001c0001t0033g0004 a0004c0014t0007g0026	6	200	0.0300	16	c.552 others(35): Show c.552+33004_552+33005insTGTGTGTGTGTGTGAG	TCF7L2	ENSG00000148737.18	transcript	ENST00000355995.9	protein_coding	5/14		INFO_REALIGN_3_PRIME	chr10	TogoVar
TCF7L2_chr10_112945247_113172678	113083259	G G	GACACACA others(9): Show GACACACACACACACAC	intron_variant intron_variant	MODIFIER	HG02738.hp1 HG02738.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0011 a0001c0001t0011	a0001c0001t0011g0165 a0001c0001t0011g0165	1	200	0.0050	16	c.552 others(35): Show c.552+43152_552+43167dupACACACACACACACAC	TCF7L2	ENSG00000148737.18	transcript	ENST00000355995.9	protein_coding	5/14		INFO_REALIGN_3_PRIME	chr10	TogoVar
TCF7L2_chr10_112945247_113172678	113118518	G G	GGTGTGTG others(9): Show GGTGTGTGTGTGTGTGT	intron_variant intron_variant	MODIFIER	HG00099.hp1 HG00140.hp2 HG00741.hp2 others(4): Show HG00099.hp1 HG00140.hp2 HG00741.hp2 HG02040.hp2 HG02486.hp1 HG02970.hp1 NA20129.hp2	a0001 a0007 a0001 a0007	a0001c0001 a0007c0012 a0001c0001 a0007c0012	a0001c0001t0001 a0001c0001t0002 a0001c0001t0003 others(4): Show a0001c0001t0001 a0001c0001t0002 a0001c0001t0003 a0001c0001t0005 a0001c0001t0006 a0001c0001t0009 a0007c0012t0003	a0001c0001t0001g0068 a0001c0001t0002g0113 a0001c0001t0003g0163 others(4): Show a0001c0001t0001g0068 a0001c0001t0002g0113 a0001c0001t0003g0163 a0001c0001t0005g0140 a0001c0001t0006g0141 a0001c0001t0009g0073 a0007c0012t0003g0167	7	200	0.0350	16	c.553 others(35): Show c.553-22665_553-22664insTGTGTGTGTGTGTGTG	TCF7L2	ENSG00000148737.18	transcript	ENST00000355995.9	protein_coding	5/14		INFO_REALIGN_3_PRIME	chr10	TogoVar
TCHHL1_chr1_152079141_152094064	152082756	C C	CATATATA others(9): Show CATATATATATATATAT	downstream_gene_variant downstream_gene_variant	MODIFIER	HG00597.hp2 HG02055.hp2 HG06807.hp2 others(1): Show HG00597.hp2 HG02055.hp2 HG06807.hp2 NA19030.hp2	a0001 a0002 a0003 a0001 a0002 a0003	a0001c0001 a0002c0008 a0002c0013 others(1): Show a0001c0001 a0002c0008 a0002c0013 a0003c0003	a0001c0001t0001 a0002c0008t0001 a0002c0013t0001 others(1): Show a0001c0001t0001 a0002c0008t0001 a0002c0013t0001 a0003c0003t0001	a0001c0001t0001g0001 a0002c0008t0001g0011 a0002c0013t0001g0019 others(1): Show a0001c0001t0001g0001 a0002c0008t0001g0011 a0002c0013t0001g0019 a0003c0003t0001g0004	4	376	0.0106	16	c.22 others(27): Show c.2210_*2211insATATATATATATATAT	TCHHL1	ENSG00000182898.4	transcript	ENST00000368806.2	protein_coding		1384		chr1	TogoVar
TCL1A_chr14_95704947_95719125	95706051	A A	ATCTATCT others(9): Show ATCTATCTATCTATCTG	downstream_gene_variant downstream_gene_variant	MODIFIER	HG03098.hp1 HG03098.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0005 a0001c0001t0005	a0001c0001t0005g0031 a0001c0001t0005g0031	1	374	0.0027	16	c.48 others(27): Show c.4836_*4837insCAGATAGATAGATAGA	TCL1A	ENSG00000100721.11	transcript	ENST00000402399.6	protein_coding		3895		chr14	TogoVar
TCL1A_chr14_95704947_95719125	95708502	A A	AAAAAATA others(9): Show AAAAAATATATATATAT	downstream_gene_variant downstream_gene_variant	MODIFIER	NA18947.hp1 NA18947.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0002 a0001c0001t0001g0002	1	374	0.0027	16	c.23 others(27): Show c.2385_*2386insATATATATATATTTTT	TCL1A	ENSG00000100721.11	transcript	ENST00000402399.6	protein_coding		1444		chr14	TogoVar
TCN2_chr22_30602174_30632271	30624001	T T	TATGTATA others(9): Show TATGTATACATACACAC	intron_variant intron_variant	MODIFIER	NA20129.hp2 NA20129.hp2	a0004 a0004	a0004c0004 a0004c0004	a0004c0004t0005 a0004c0004t0005	a0004c0004t0005g0122 a0004c0004t0005g0122	1	466	0.0022	16	c.122 others(33): Show c.1222+920_1222+921insGTATACATACACACAT	TCN2	ENSG00000185339.10	transcript	ENST00000215838.8	protein_coding	8/8		INFO_REALIGN_3_PRIME	chr22	TogoVar
TCN2_chr22_30602174_30632271	30624043	T T	TATACACA others(9): Show TATACACACATATACAC	intron_variant intron_variant	MODIFIER	HG04184.hp1 HG04184.hp1	a0005 a0005	a0005c0005 a0005c0005	a0005c0005t0001 a0005c0005t0001	a0005c0005t0001g0194 a0005c0005t0001g0194	1	466	0.0022	16	c.122 others(33): Show c.1222+961_1222+962insTACACACATATACACA	TCN2	ENSG00000185339.10	transcript	ENST00000215838.8	protein_coding	8/8		INFO_REALIGN_3_PRIME	chr22	TogoVar
TCN2_chr22_30602174_30632271	30629499	C C	CAAAAAAA others(9): Show CAAAAAAAAAAAAAAAA	downstream_gene_variant downstream_gene_variant	MODIFIER	NA18906.hp2 NA18906.hp2	a0006 a0006	a0006c0007 a0006c0007	a0006c0007t0010 a0006c0007t0010	a0006c0007t0010g0222 a0006c0007t0010g0222	1	466	0.0022	16	c.29 others(27): Show c.2978_*2979insAAAAAAAAAAAAAAAA	TCN2	ENSG00000185339.10	transcript	ENST00000215838.8	protein_coding		2229		chr22	TogoVar
TCP11L1_chr11_33034572_33078550	33038139	C C	CTTTTTTT others(9): Show CTTTTTTTTTTTTTTTT	upstream_gene_variant upstream_gene_variant	MODIFIER	HG00642.hp2 HG01071.hp2 HG01106.hp1 others(52): Show HG00642.hp2 HG01071.hp2 HG01106.hp1 HG01257.hp1 HG01496.hp1 HG01516.hp1 HG01517.hp2 HG01884.hp1 HG01943.hp2 HG02027.hp2 HG02040.hp2 HG02080.hp1 HG02129.hp1 HG02165.hp1 HG02165.hp2 HG02572.hp2 HG02818.hp2 HG02895.hp2 HG02897.hp2 HG03041.hp2 HG03490.hp2 HG03654.hp2 HG03669.hp2 HG03710.hp2 HG04115.hp1 HG04115.hp2 HG04184.hp1 HG04199.hp2 NA18522.hp2 NA18946.hp1 NA18948.hp2 NA18951.hp1 NA18953.hp2 NA18967.hp2 NA18969.hp1 NA18971.hp2 NA18972.hp1 NA18974.hp2 NA18978.hp1 NA18983.hp2 NA18987.hp2 NA18992.hp1 NA18997.hp1 NA19001.hp1 NA19004.hp2 NA19009.hp2 NA19054.hp2 NA19056.hp1 NA19058.hp1 NA19064.hp1 NA19066.hp1 NA19074.hp2 NA19082.hp1 NA20905.hp2 NA21309.hp2	a0001 a0004 a0001 a0004	a0001c0002 a0001c0003 a0001c0006 others(2): Show a0001c0002 a0001c0003 a0001c0006 a0001c0008 a0004c0011	a0001c0002t0001 a0001c0003t0001 a0001c0006t0004 others(2): Show a0001c0002t0001 a0001c0003t0001 a0001c0006t0004 a0001c0008t0001 a0004c0011t0001	a0001c0002t0001g0153 a0001c0003t0001g0002 a0001c0003t0001g0010 others(35): Show a0001c0002t0001g0153 a0001c0003t0001g0002 a0001c0003t0001g0010 a0001c0003t0001g0016 a0001c0003t0001g0022 a0001c0003t0001g0036 a0001c0003t0001g0037 a0001c0003t0001g0038 a0001c0003t0001g0039 a0001c0003t0001g0149 a0001c0003t0001g0150 a0001c0003t0001g0154 a0001c0003t0001g0155 a0001c0003t0001g0156 a0001c0003t0001g0157 a0001c0003t0001g0160 a0001c0003t0001g0161 a0001c0003t0001g0162 a0001c0003t0001g0165 a0001c0003t0001g0166 a0001c0003t0001g0170 a0001c0003t0001g0171 a0001c0003t0001g0175 a0001c0003t0001g0177 a0001c0003t0001g0179 a0001c0003t0001g0180 a0001c0003t0001g0181 a0001c0003t0001g0183 a0001c0003t0001g0186 a0001c0003t0001g0190 a0001c0003t0001g0191 a0001c0003t0001g0192 a0001c0003t0001g0193 a0001c0003t0001g0194 a0001c0006t0004g0146 a0001c0006t0004g0147 a0001c0008t0001g0041 a0004c0011t0001g0182	55	390	0.1410	16	c.-16 others(27): Show c.-1678_-1677insTTTTTTTTTTTTTTTT	TCP11L1	ENSG00000176148.16	transcript	ENST00000334274.9	protein_coding		1432		chr11	TogoVar
TCP11L1_chr11_33034572_33078550	33038153	T T	TTTTTTTT others(9): Show TTTTTTTTTTTTTTTTC	upstream_gene_variant upstream_gene_variant	MODIFIER	HG02572.hp1 HG02572.hp1	a0002 a0002	a0002c0004 a0002c0004	a0002c0004t0001 a0002c0004t0001	a0002c0004t0001g0213 a0002c0004t0001g0213	1	390	0.0026	16	c.-16 others(27): Show c.-1664_-1663insTTTTTTTTTTTTTTTC	TCP11L1	ENSG00000176148.16	transcript	ENST00000334274.9	protein_coding		1418		chr11	TogoVar
TCP11L2_chr12_106297733_106352003	106313582	A A	AAAATAAA others(9): Show AAAATAAATAAATAAAT	intron_variant intron_variant	MODIFIER	HG04204.hp1 HG04204.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0010 a0001c0001t0010	a0001c0001t0010g0268 a0001c0001t0010g0268	1	344	0.0029	16	c.158 others(31): Show c.158-754_158-739dupAATAAATAAATAAATA	TCP11L2	ENSG00000166046.11	transcript	ENST00000299045.8	protein_coding	2/9		INFO_REALIGN_3_PRIME	chr12	TogoVar
TCP11L2_chr12_106297733_106352003	106349049	C C	CTTTTTTT others(9): Show CTTTTTTTTTTTTTTTT	downstream_gene_variant downstream_gene_variant	MODIFIER	HG03098.hp1 HG03098.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0003 a0001c0001t0003	a0001c0001t0003g0058 a0001c0001t0003g0058	1	344	0.0029	16	c.25 others(27): Show c.2519_*2520insTTTTTTTTTTTTTTTT	TCP11L2	ENSG00000166046.11	transcript	ENST00000299045.8	protein_coding		2047		chr12	TogoVar
TCP11X2_chrX_102455315_102476812	102466410	A A	AATATATA others(9): Show AATATATATATATATAT	intron_variant intron_variant	MODIFIER	NA18968.hp2 NA18968.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0028 a0001c0001t0001g0028	1	137	0.0073	16	c.231 others(31): Show c.231-842_231-841insATATATATATATATAT	TCP11X2	ENSG00000215029.12	transcript	ENST00000642911.3	protein_coding	3/9			chrX	TogoVar
TCP11X2_chrX_102455315_102476812	102466412	A A	AATATATA others(9): Show AATATATATATATATAT	intron_variant intron_variant	MODIFIER	HG01361.hp2 HG01361.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0087 a0001c0001t0001g0087	1	137	0.0073	16	c.231 others(31): Show c.231-844_231-843insATATATATATATATAT	TCP11X2	ENSG00000215029.12	transcript	ENST00000642911.3	protein_coding	3/9			chrX	TogoVar
TCP11X2_chrX_102455315_102476812	102466414	A A	AATATATA others(9): Show AATATATATATATATAT	intron_variant intron_variant	MODIFIER	NA20129.hp1 NA20129.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0035 a0001c0001t0001g0035	1	137	0.0073	16	c.231 others(31): Show c.231-846_231-845insATATATATATATATAT	TCP11X2	ENSG00000215029.12	transcript	ENST00000642911.3	protein_coding	3/9			chrX	TogoVar
TCTN1_chr12_110609129_110654430	110635550	G G	GGCTGAGG others(9): Show GGCTGAGGTTGCAGTGA	intron_variant intron_variant	MODIFIER	NA18962.hp1 NA18983.hp1 NA18983.hp2 others(3): Show NA18962.hp1 NA18983.hp1 NA18983.hp2 NA19007.hp2 NA19010.hp2 NA19075.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0010 a0001c0001t0001g0037 a0001c0001t0001g0045 others(1): Show a0001c0001t0001g0010 a0001c0001t0001g0037 a0001c0001t0001g0045 a0001c0001t0001g0053	6	284	0.0211	16	c.822 others(31): Show c.822+791_822+806dupGAGGTTGCAGTGAGCT	TCTN1	ENSG00000204852.17	transcript	ENST00000397659.9	protein_coding	6/14		INFO_REALIGN_3_PRIME	chr12	TogoVar
TCTN2_chr12_123666113_123713399	123712053	T T	TCACACAC others(9): Show TCACACACACACACACA	downstream_gene_variant downstream_gene_variant	MODIFIER	HG00323.hp2 HG00323.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0002 a0001c0001t0002	a0001c0001t0002g0131 a0001c0001t0002g0131	1	236	0.0042	16	c.43 others(27): Show c.4340_*4341insCACACACACACACACA	TCTN2	ENSG00000168778.13	transcript	ENST00000303372.7	protein_coding		3655		chr12	TogoVar
TCTN2_chr12_123666113_123713399	123712055	T T	TCACACAC others(9): Show TCACACACACACACACA	downstream_gene_variant downstream_gene_variant	MODIFIER	HG00738.hp1 HG01255.hp2 HG01358.hp2 others(4): Show HG00738.hp1 HG01255.hp2 HG01358.hp2 HG02027.hp2 HG03486.hp2 HG03490.hp2 HG03492.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0002 a0001c0001t0019 a0001c0001t0002 a0001c0001t0019	a0001c0001t0002g0002 a0001c0001t0002g0021 a0001c0001t0002g0139 others(2): Show a0001c0001t0002g0002 a0001c0001t0002g0021 a0001c0001t0002g0139 a0001c0001t0002g0141 a0001c0001t0019g0159	7	236	0.0297	16	c.43 others(27): Show c.4342_*4343insCACACACACACACACA	TCTN2	ENSG00000168778.13	transcript	ENST00000303372.7	protein_coding		3657		chr12	TogoVar
TCTN2_chr12_123666113_123713399	123712059	T T	TCACACAC others(9): Show TCACACACACACACACA	downstream_gene_variant downstream_gene_variant	MODIFIER	HG02572.hp2 HG02572.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0006 a0001c0001t0006	a0001c0001t0006g0122 a0001c0001t0006g0122	1	236	0.0042	16	c.43 others(27): Show c.4346_*4347insCACACACACACACACA	TCTN2	ENSG00000168778.13	transcript	ENST00000303372.7	protein_coding		3661		chr12	TogoVar
TCTN2_chr12_123666113_123713399	123712076	C C	CACACACA others(9): Show CACACACACACACACAT	downstream_gene_variant downstream_gene_variant	MODIFIER	HG01243.hp2 HG02818.hp2 NA18522.hp2 others(2): Show HG01243.hp2 HG02818.hp2 NA18522.hp2 NA19030.hp2 NA21309.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0004 a0001c0001t0006 a0001c0001t0004 a0001c0001t0006	a0001c0001t0004g0117 a0001c0001t0004g0119 a0001c0001t0004g0120 others(2): Show a0001c0001t0004g0117 a0001c0001t0004g0119 a0001c0001t0004g0120 a0001c0001t0006g0116 a0001c0001t0006g0118	5	236	0.0212	16	c.43 others(27): Show c.4363_*4364insACACACACACACACAT	TCTN2	ENSG00000168778.13	transcript	ENST00000303372.7	protein_coding		3678		chr12	TogoVar
TCTN3_chr10_95658401_95698927	95672160	T T	TTGTGTGT others(9): Show TTGTGTGTGTGTGTGTG	intron_variant intron_variant	MODIFIER	HG02451.hp1 HG03516.hp1 NA18985.hp1 HG02451.hp1 HG03516.hp1 NA18985.hp1	a0001 a0002 a0001 a0002	a0001c0001 a0001c0002 a0002c0004 a0001c0001 a0001c0002 a0002c0004	a0001c0001t0001 a0001c0002t0001 a0002c0004t0001 a0001c0001t0001 a0001c0002t0001 a0002c0004t0001	a0001c0001t0001g0147 a0001c0002t0001g0057 a0002c0004t0001g0307 a0001c0001t0001g0147 a0001c0002t0001g0057 a0002c0004t0001g0307	3	400	0.0075	16	c.159 others(35): Show c.1591-7861_1591-7860insCACACACACACACACA	TCTN3	ENSG00000119977.22	transcript	ENST00000371217.10	protein_coding	13/13			chr10	TogoVar
TCTN3_chr10_95658401_95698927	95677473	A A	ACAGTTTT others(9): Show ACAGTTTTTTTTTTTTT	intron_variant intron_variant	MODIFIER	HG02451.hp2 HG04228.hp2 homoSapiens_chm13v2.hp1 HG02451.hp2 HG04228.hp2 homoSapiens_chm13v2.hp1	a0001 a0002 a0001 a0002	a0001c0002 a0002c0003 a0001c0002 a0002c0003	a0001c0002t0001 a0002c0003t0001 a0001c0002t0001 a0002c0003t0001	a0001c0002t0001g0070 a0002c0003t0001g0279 a0002c0003t0001g0283 a0001c0002t0001g0070 a0002c0003t0001g0279 a0002c0003t0001g0283	3	400	0.0075	16	c.159 others(35): Show c.1590+2998_1590+2999insAAAAAAAAAAAAACTG	TCTN3	ENSG00000119977.22	transcript	ENST00000371217.10	protein_coding	13/13			chr10	TogoVar
TDGF1_chr3_46572788_46587457	46573187	A A	AACACACA others(9): Show AACACACACACACACAC	upstream_gene_variant upstream_gene_variant	MODIFIER	HG01433.hp2 HG02109.hp1 NA18979.hp2 others(2): Show HG01433.hp2 HG02109.hp1 NA18979.hp2 NA18992.hp2 NA19068.hp1	a0002 a0002	a0002c0002 a0002c0002	a0002c0002t0003 a0002c0002t0008 a0002c0002t0003 a0002c0002t0008	a0002c0002t0003g0001 a0002c0002t0003g0002 a0002c0002t0003g0010 others(1): Show a0002c0002t0003g0001 a0002c0002t0003g0002 a0002c0002t0003g0010 a0002c0002t0008g0023	5	444	0.0113	16	c.-47 others(27): Show c.-4783_-4782insACACACACACACACAC	TDGF1	ENSG00000241186.10	transcript	ENST00000296145.6	protein_coding		4600		chr3	TogoVar
TDGF1_chr3_46572788_46587457	46573537	A A	AATATATA others(9): Show AATATATATATATATAT	upstream_gene_variant upstream_gene_variant	MODIFIER	NA19043.hp2 NA19043.hp2	a0002 a0002	a0002c0002 a0002c0002	a0002c0002t0003 a0002c0002t0003	a0002c0002t0003g0002 a0002c0002t0003g0002	1	444	0.0023	16	c.-44 others(27): Show c.-4433_-4432insATATATATATATATAT	TDGF1	ENSG00000241186.10	transcript	ENST00000296145.6	protein_coding		4250		chr3	TogoVar
TDGF1_chr3_46572788_46587457	46573539	A A	AATATATA others(9): Show AATATATATATATATAT	upstream_gene_variant upstream_gene_variant	MODIFIER	NA18962.hp1 NA18962.hp1	a0002 a0002	a0002c0002 a0002c0002	a0002c0002t0003 a0002c0002t0003	a0002c0002t0003g0025 a0002c0002t0003g0025	1	444	0.0023	16	c.-44 others(27): Show c.-4431_-4430insATATATATATATATAT	TDGF1	ENSG00000241186.10	transcript	ENST00000296145.6	protein_coding		4248		chr3	TogoVar
TDGF1_chr3_46572788_46587457	46573547	A A	AAAAAATA others(9): Show AAAAAATATATATATAT	upstream_gene_variant upstream_gene_variant	MODIFIER	HG00323.hp1 HG00323.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0001 a0001c0001t0001g0001	1	444	0.0023	16	c.-44 others(27): Show c.-4423_-4422insAAAAATATATATATAT	TDGF1	ENSG00000241186.10	transcript	ENST00000296145.6	protein_coding		4240		chr3	TogoVar
TDGF1_chr3_46572788_46587457	46573547	A A	AAAATATA others(9): Show AAAATATATATATATAT	upstream_gene_variant upstream_gene_variant	MODIFIER	HG00280.hp1 HG01175.hp1 HG00280.hp1 HG01175.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0001 a0001c0001t0001g0001	2	444	0.0045	16	c.-44 others(27): Show c.-4423_-4422insAAATATATATATATAT	TDGF1	ENSG00000241186.10	transcript	ENST00000296145.6	protein_coding		4240		chr3	TogoVar
TDGF1_chr3_46572788_46587457	46573547	A A	AAAATATA others(9): Show AAAATATATATATGTAT	upstream_gene_variant upstream_gene_variant	MODIFIER	HG00323.hp2 HG00323.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0001 a0001c0001t0001g0001	1	444	0.0023	16	c.-44 others(27): Show c.-4423_-4422insAAATATATATATGTAT	TDGF1	ENSG00000241186.10	transcript	ENST00000296145.6	protein_coding		4240		chr3	TogoVar
TDG_chr12_103960872_103993874	103976408	C C	CCACACAC others(9): Show CCACACACACACACACA	intron_variant intron_variant	MODIFIER	HG01884.hp2 NA18959.hp2 NA19067.hp1 HG01884.hp2 NA18959.hp2 NA19067.hp1	a0003 a0003	a0003c0003 a0003c0003	a0003c0003t0001 a0003c0003t0001	a0003c0003t0001g0043 a0003c0003t0001g0148 a0003c0003t0001g0043 a0003c0003t0001g0148	3	444	0.0068	16	c.24- others(29): Show c.24-497_24-482dupCACACACACACACACA	TDG	ENSG00000139372.15	transcript	ENST00000392872.8	protein_coding	1/9		INFO_REALIGN_3_PRIME	chr12	TogoVar
TDP1_chr14_89950927_90049764	89998416	A A	ATATATAT others(9): Show ATATATATATATGTATG	intron_variant intron_variant	MODIFIER	HG02486.hp2 HG02486.hp2	a0001 a0001	a0001c0002 a0001c0002	a0001c0002t0013 a0001c0002t0013	a0001c0002t0013g0210 a0001c0002t0013g0210	1	264	0.0038	16	c.154 others(35): Show c.1541+4940_1541+4941insATATGTATGTATATAT	TDP1	ENSG00000042088.14	transcript	ENST00000335725.9	protein_coding	14/16		INFO_REALIGN_3_PRIME	chr14	TogoVar
TDP1_chr14_89950927_90049764	89998416	A A	ATATGTAT others(9): Show ATATGTATGTATGTATG	intron_variant intron_variant	MODIFIER	HG02559.hp1 HG02559.hp1	a0002 a0002	a0002c0003 a0002c0003	a0002c0003t0003 a0002c0003t0003	a0002c0003t0003g0195 a0002c0003t0003g0195	1	264	0.0038	16	c.154 others(35): Show c.1541+4936_1541+4937insGTATGTATGTATGTAT	TDP1	ENSG00000042088.14	transcript	ENST00000335725.9	protein_coding	14/16		INFO_REALIGN_3_PRIME	chr14	TogoVar

Search by Variant

Search

Search Results