Joint Open Genome and Omics Platform (JoGo)

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regionname	pos	ref	alt	annotation	impact	samples	ahapids	chapids	thapids	thapids	ac	an	af	len	hgvs_c	genename	geneid	featuretype	featureid	transcript_biotype	rank	distance	status	chr	external
THEM6_chr8_142722223_142741927	142732161	A A	AATATATA others(9): Show AATATATATATATATAT	intron_variant intron_variant	MODIFIER	HG00741.hp2 HG01109.hp2 HG01167.hp2 others(10): Show HG00741.hp2 HG01109.hp2 HG01167.hp2 HG01192.hp1 HG01975.hp2 HG01978.hp2 HG02965.hp1 HG03540.hp1 HG03831.hp1 HG06807.hp1 NA19079.hp2 NA19081.hp2 NA19087.hp1	a0001 a0001	a0001c0001 a0001c0002 a0001c0003 a0001c0001 a0001c0002 a0001c0003	a0001c0001t0003 a0001c0002t0001 a0001c0003t0007 a0001c0001t0003 a0001c0002t0001 a0001c0003t0007	a0001c0001t0003g0019 a0001c0001t0003g0026 a0001c0001t0003g0077 others(4): Show a0001c0001t0003g0019 a0001c0001t0003g0026 a0001c0001t0003g0077 a0001c0001t0003g0082 a0001c0002t0001g0054 a0001c0002t0001g0117 a0001c0003t0007g0167	13	101	0.1287	16	c.514 others(33): Show c.514-3134_514-3119dupATATATATATATATAT	THEM6	ENSG00000130193.8	transcript	ENST00000336138.4	protein_coding	1/1		INFO_REALIGN_3_PRIME	chr8	TogoVar
THEM6_chr8_142722223_142741927	142732204	A A	ATATATAT others(9): Show ATATATATATATATATG	intron_variant intron_variant	MODIFIER	HG02109.hp1 HG02970.hp2 HG02109.hp1 HG02970.hp2	a0001 a0001	a0001c0002 a0001c0002	a0001c0002t0009 a0001c0002t0009	a0001c0002t0009g0030 a0001c0002t0009g0030	2	400	0.0050	16	c.514 others(33): Show c.514-3119_514-3118insATATATATATATGTAT	THEM6	ENSG00000130193.8	transcript	ENST00000336138.4	protein_coding	1/1		INFO_REALIGN_3_PRIME	chr8	TogoVar
THEMIS_chr6_127703200_127906058	127731864	A A	ATTTTTTT others(9): Show ATTTTTTTTTTTTTTTT	intron_variant intron_variant	MODIFIER	NA18953.hp1 NA18953.hp1	a0002 a0002	a0002c0001 a0002c0001	a0002c0001t0001 a0002c0001t0001	a0002c0001t0001g0059 a0002c0001t0001g0059	1	6	0.1667	16	c.175 others(37): Show c.1759-12057_1759-12042dupAAAAAAAAAAAAAAAA	THEMIS	ENSG00000172673.12	transcript	ENST00000368248.5	protein_coding	4/5			chr6	TogoVar
THEMIS_chr6_127703200_127906058	127785205	T T	TATTGTCT others(9): Show TATTGTCTACCTACCTA	intron_variant intron_variant	MODIFIER	HG02895.hp1 HG02895.hp1	a0001 a0001	a0001c0002 a0001c0002	a0001c0002t0003 a0001c0002t0003	a0001c0002t0003g0185 a0001c0002t0003g0185	1	222	0.0045	16	c.175 others(37): Show c.1758+27677_1758+27678insTAGGTAGGTAGACAAT	THEMIS	ENSG00000172673.12	transcript	ENST00000368248.5	protein_coding	4/5			chr6	TogoVar
THEMIS_chr6_127703200_127906058	127785220	T T	TTATCTAT others(9): Show TTATCTATCTATCTATC	intron_variant intron_variant	MODIFIER	HG01074.hp2 HG01243.hp1 HG01261.hp2 others(29): Show HG01074.hp2 HG01243.hp1 HG01261.hp2 HG01361.hp2 HG01496.hp1 HG01515.hp1 HG01515.hp2 HG01517.hp1 HG02145.hp1 HG02293.hp2 HG02615.hp2 HG02809.hp2 HG03041.hp2 HG03130.hp1 HG03139.hp1 HG03139.hp2 HG03239.hp1 HG03239.hp2 HG03516.hp2 HG03704.hp2 HG03927.hp1 HG04228.hp2 HG06807.hp2 NA18945.hp1 NA18956.hp1 NA18960.hp1 NA19010.hp1 NA19030.hp2 NA19043.hp1 NA19084.hp1 NA19090.hp2 NA20805.hp1	a0001 a0002 a0001 a0002	a0001c0002 a0001c0003 a0002c0001 others(1): Show a0001c0002 a0001c0003 a0002c0001 a0002c0004	a0001c0002t0001 a0001c0002t0002 a0001c0003t0001 others(3): Show a0001c0002t0001 a0001c0002t0002 a0001c0003t0001 a0001c0003t0003 a0002c0001t0001 a0002c0004t0001	a0001c0002t0001g0054 a0001c0002t0001g0060 a0001c0002t0001g0069 others(28): Show a0001c0002t0001g0054 a0001c0002t0001g0060 a0001c0002t0001g0069 a0001c0002t0001g0077 a0001c0002t0001g0079 a0001c0002t0001g0128 a0001c0002t0001g0132 a0001c0002t0001g0152 a0001c0002t0001g0177 a0001c0002t0001g0190 a0001c0002t0002g0001 a0001c0002t0002g0058 a0001c0002t0002g0092 a0001c0002t0002g0143 a0001c0002t0002g0145 a0001c0002t0002g0146 a0001c0002t0002g0147 a0001c0002t0002g0150 a0001c0002t0002g0151 a0001c0002t0002g0164 a0001c0003t0001g0062 a0001c0003t0001g0066 a0001c0003t0001g0084 a0001c0003t0001g0135 a0001c0003t0001g0157 a0001c0003t0001g0172 a0001c0003t0003g0008 a0002c0001t0001g0002 a0002c0001t0001g0022 a0002c0001t0001g0036 a0002c0004t0001g0006	32	79	0.4051	16	c.175 others(37): Show c.1758+27647_1758+27662dupGATAGATAGATAGATA	THEMIS	ENSG00000172673.12	transcript	ENST00000368248.5	protein_coding	4/5			chr6	TogoVar
THEMIS_chr6_127703200_127906058	127787803	G G	GTAGATAG others(9): Show GTAGATAGATAGATAGA	intron_variant intron_variant	MODIFIER	HG00438.hp1 HG02965.hp2 HG03041.hp2 HG00438.hp1 HG02965.hp2 HG03041.hp2	a0001 a0002 a0001 a0002	a0001c0003 a0002c0001 a0001c0003 a0002c0001	a0001c0003t0001 a0002c0001t0001 a0001c0003t0001 a0002c0001t0001	a0001c0003t0001g0084 a0002c0001t0001g0016 a0002c0001t0001g0032 a0001c0003t0001g0084 a0002c0001t0001g0016 a0002c0001t0001g0032	3	58	0.0517	16	c.175 others(37): Show c.1758+25064_1758+25079dupTCTATCTATCTATCTA	THEMIS	ENSG00000172673.12	transcript	ENST00000368248.5	protein_coding	4/5			chr6	TogoVar
THEMIS_chr6_127703200_127906058	127787880	T T	TAGATAGA others(9): Show TAGATAGATAGATATAG	intron_variant intron_variant	MODIFIER	HG01515.hp2 HG02818.hp1 HG03139.hp2 others(7): Show HG01515.hp2 HG02818.hp1 HG03139.hp2 HG03540.hp1 NA18945.hp1 NA18951.hp2 NA18954.hp2 NA19043.hp1 NA20129.hp1 NA20300.hp1	a0001 a0002 a0001 a0002	a0001c0002 a0001c0003 a0001c0010 others(2): Show a0001c0002 a0001c0003 a0001c0010 a0002c0001 a0002c0004	a0001c0002t0001 a0001c0003t0001 a0001c0010t0001 others(2): Show a0001c0002t0001 a0001c0003t0001 a0001c0010t0001 a0002c0001t0001 a0002c0004t0001	a0001c0002t0001g0013 a0001c0002t0001g0023 a0001c0003t0001g0135 others(7): Show a0001c0002t0001g0013 a0001c0002t0001g0023 a0001c0003t0001g0135 a0001c0003t0001g0156 a0001c0003t0001g0157 a0001c0003t0001g0160 a0001c0003t0001g0172 a0001c0010t0001g0085 a0002c0001t0001g0022 a0002c0004t0001g0158	10	68	0.1471	16	c.175 others(37): Show c.1758+25002_1758+25003insCTATATCTATCTATCT	THEMIS	ENSG00000172673.12	transcript	ENST00000368248.5	protein_coding	4/5			chr6	TogoVar
THEMIS_chr6_127703200_127906058	127787880	T T	TAGATAGA others(9): Show TAGATAGATATAGATAG	intron_variant intron_variant	MODIFIER	HG03098.hp1 HG03098.hp1	a0001 a0001	a0001c0003 a0001c0003	a0001c0003t0001 a0001c0003t0001	a0001c0003t0001g0141 a0001c0003t0001g0141	1	59	0.0169	16	c.175 others(37): Show c.1758+25002_1758+25003insCTATCTATATCTATCT	THEMIS	ENSG00000172673.12	transcript	ENST00000368248.5	protein_coding	4/5			chr6	TogoVar
THEMIS_chr6_127703200_127906058	127787880	T T	TAGATATA others(9): Show TAGATATAGATAGATAG	intron_variant intron_variant	MODIFIER	HG03704.hp2 HG03704.hp2	a0001 a0001	a0001c0002 a0001c0002	a0001c0002t0002 a0001c0002t0002	a0001c0002t0002g0164 a0001c0002t0002g0164	1	59	0.0169	16	c.175 others(37): Show c.1758+25002_1758+25003insCTATCTATCTATATCT	THEMIS	ENSG00000172673.12	transcript	ENST00000368248.5	protein_coding	4/5			chr6	TogoVar
THEMIS_chr6_127703200_127906058	127819118	T T	TAAAAAAA others(9): Show TAAAAAAAAAAAAAAAA	intron_variant intron_variant	MODIFIER	HG02615.hp2 HG02615.hp2	a0002 a0002	a0002c0001 a0002c0001	a0002c0001t0001 a0002c0001t0001	a0002c0001t0001g0002 a0002c0001t0001g0002	1	8	0.1250	16	c.710 others(33): Show c.710-5203_710-5188dupTTTTTTTTTTTTTTTT	THEMIS	ENSG00000172673.12	transcript	ENST00000368248.5	protein_coding	3/5			chr6	TogoVar
THEMIS_chr6_127703200_127906058	127832777	C C	CTTTTTTT others(9): Show CTTTTTTTTTTTTTTTT	intron_variant intron_variant	MODIFIER	HG02970.hp2 HG03139.hp2 NA19043.hp2 others(1): Show HG02970.hp2 HG03139.hp2 NA19043.hp2 NA20300.hp1	a0001 a0002 a0001 a0002	a0001c0002 a0002c0001 a0001c0002 a0002c0001	a0001c0002t0001 a0002c0001t0001 a0001c0002t0001 a0002c0001t0001	a0001c0002t0001g0003 a0001c0002t0001g0004 a0001c0002t0001g0023 others(1): Show a0001c0002t0001g0003 a0001c0002t0001g0004 a0001c0002t0001g0023 a0002c0001t0001g0022	4	9	0.4444	16	c.251 others(33): Show c.251-2859_251-2844dupAAAAAAAAAAAAAAAA	THEMIS	ENSG00000172673.12	transcript	ENST00000368248.5	protein_coding	2/5			chr6	TogoVar
THEMIS_chr6_127703200_127906058	127862428	A A	ATTTTTTT others(9): Show ATTTTTTTTTTTTTTTT	intron_variant intron_variant	MODIFIER	HG00621.hp1 HG01192.hp2 HG01243.hp1 others(12): Show HG00621.hp1 HG01192.hp2 HG01243.hp1 HG01256.hp2 HG01433.hp2 HG01515.hp1 HG01517.hp1 HG01943.hp2 HG01981.hp1 HG01993.hp1 HG02683.hp2 HG03486.hp2 NA18955.hp2 NA19011.hp1 NA19086.hp1	a0001 a0002 a0001 a0002	a0001c0002 a0002c0001 a0001c0002 a0002c0001	a0001c0002t0002 a0001c0002t0004 a0002c0001t0001 others(1): Show a0001c0002t0002 a0001c0002t0004 a0002c0001t0001 a0002c0001t0007	a0001c0002t0002g0001 a0001c0002t0002g0143 a0001c0002t0002g0144 others(11): Show a0001c0002t0002g0001 a0001c0002t0002g0143 a0001c0002t0002g0144 a0001c0002t0002g0149 a0001c0002t0002g0159 a0001c0002t0002g0163 a0001c0002t0002g0165 a0001c0002t0004g0130 a0002c0001t0001g0201 a0002c0001t0001g0204 a0002c0001t0001g0208 a0002c0001t0001g0209 a0002c0001t0001g0211 a0002c0001t0007g0142	15	69	0.2174	16	c.92- others(31): Show c.92-7256_92-7241dupAAAAAAAAAAAAAAAA	THEMIS	ENSG00000172673.12	transcript	ENST00000368248.5	protein_coding	1/5			chr6	TogoVar
THEMIS_chr6_127703200_127906058	127866949	T T	TTTTATTT others(9): Show TTTTATTTATTTATTTA	intron_variant intron_variant	MODIFIER	HG01081.hp1 HG01261.hp1 HG01081.hp1 HG01261.hp1	a0001 a0002 a0001 a0002	a0001c0002 a0002c0001 a0001c0002 a0002c0001	a0001c0002t0001 a0002c0001t0001 a0001c0002t0001 a0002c0001t0001	a0001c0002t0001g0193 a0002c0001t0001g0194 a0001c0002t0001g0193 a0002c0001t0001g0194	2	78	0.0256	16	c.92- others(33): Show c.92-11777_92-11762dupTAAATAAATAAATAAA	THEMIS	ENSG00000172673.12	transcript	ENST00000368248.5	protein_coding	1/5			chr6	TogoVar
THNSL1_chr10_25011612_25031664	25020276	A A	ATATCTAT others(9): Show ATATCTATATCTATATC	intron_variant intron_variant	MODIFIER	HG00323.hp2 HG00423.hp2 HG00438.hp1 others(72): Show HG00323.hp2 HG00423.hp2 HG00438.hp1 HG00438.hp2 HG00558.hp1 HG00597.hp1 HG00673.hp2 HG00733.hp1 HG00735.hp2 HG01081.hp2 HG01109.hp1 HG01169.hp2 HG01255.hp1 HG01256.hp1 HG02040.hp1 HG02056.hp2 HG02071.hp1 HG02080.hp2 HG02129.hp1 HG02135.hp1 HG02145.hp1 HG02155.hp2 HG02165.hp2 HG02273.hp2 HG02735.hp2 HG03017.hp1 HG03017.hp2 HG03491.hp1 HG03688.hp2 HG03704.hp1 HG03831.hp1 HG03834.hp2 HG03942.hp1 HG04228.hp1 NA18941.hp1 NA18944.hp2 NA18948.hp2 NA18951.hp2 NA18954.hp1 NA18956.hp2 NA18962.hp1 NA18964.hp1 NA18968.hp1 NA18968.hp2 NA18971.hp1 NA18974.hp2 NA18975.hp1 NA18985.hp2 NA18987.hp2 NA18988.hp2 NA18989.hp2 NA18990.hp2 NA18991.hp2 NA18992.hp2 NA18995.hp2 NA18997.hp2 NA19002.hp2 NA19005.hp1 NA19009.hp1 NA19057.hp2 NA19058.hp1 NA19060.hp2 NA19063.hp1 NA19066.hp2 NA19067.hp1 NA19068.hp1 NA19068.hp2 NA19077.hp1 NA19081.hp2 NA19082.hp2 NA19084.hp1 NA19087.hp2 NA19089.hp1 NA19090.hp2 NA20300.hp2	a0001 a0003 a0008 a0001 a0003 a0008	a0001c0002 a0001c0015 a0001c0017 others(2): Show a0001c0002 a0001c0015 a0001c0017 a0003c0005 a0008c0011	a0001c0002t0002 a0001c0002t0010 a0001c0002t0011 others(6): Show a0001c0002t0002 a0001c0002t0010 a0001c0002t0011 a0001c0002t0012 a0001c0002t0016 a0001c0015t0002 a0001c0017t0009 a0003c0005t0002 a0008c0011t0009	a0001c0002t0002g0001 a0001c0002t0002g0038 a0001c0002t0002g0040 others(21): Show a0001c0002t0002g0001 a0001c0002t0002g0038 a0001c0002t0002g0040 a0001c0002t0002g0041 a0001c0002t0002g0043 a0001c0002t0002g0047 a0001c0002t0002g0082 a0001c0002t0002g0083 a0001c0002t0002g0087 a0001c0002t0002g0088 a0001c0002t0002g0089 a0001c0002t0002g0090 a0001c0002t0002g0094 a0001c0002t0002g0096 a0001c0002t0010g0001 a0001c0002t0011g0001 a0001c0002t0012g0001 a0001c0002t0016g0001 a0001c0015t0002g0001 a0001c0017t0009g0001 a0003c0005t0002g0001 a0003c0005t0002g0024 a0008c0011t0009g0001 a0008c0011t0009g0040	75	346	0.2168	16	c.-21 others(35): Show c.-215-1463_-215-1462insCTATATCTATATCTAT	THNSL1	ENSG00000185875.13	transcript	ENST00000376356.5	protein_coding	1/2		INFO_REALIGN_3_PRIME	chr10	TogoVar
THNSL1_chr10_25011612_25031664	25027356	T T	TAAAAAAA others(9): Show TAAAAAAAAAAAAAAAA	downstream_gene_variant downstream_gene_variant	MODIFIER	HG00597.hp1 HG01070.hp1 HG01071.hp1 others(5): Show HG00597.hp1 HG01070.hp1 HG01071.hp1 HG02293.hp2 HG02735.hp2 NA18964.hp2 NA18975.hp1 NA19079.hp1	a0001 a0003 a0001 a0003	a0001c0002 a0003c0005 a0001c0002 a0003c0005	a0001c0002t0002 a0003c0005t0002 a0001c0002t0002 a0003c0005t0002	a0001c0002t0002g0001 a0003c0005t0002g0024 a0001c0002t0002g0001 a0003c0005t0002g0024	8	278	0.0288	16	c.19 others(27): Show c.1901_*1902insAAAAAAAAAAAAAAAA	THNSL1	ENSG00000185875.13	transcript	ENST00000376356.5	protein_coding		693		chr10	TogoVar
THOC1_chr18_209520_273047	213975	T T	TTAGATAG others(9): Show TTAGATAGATAGATAGA	downstream_gene_variant downstream_gene_variant	MODIFIER	HG02896.hp1 NA18939.hp1 HG02896.hp1 NA18939.hp1	a0001 a0001	a0001c0001 a0001c0002 a0001c0001 a0001c0002	a0001c0001t0001 a0001c0002t0001 a0001c0001t0001 a0001c0002t0001	a0001c0001t0001g0041 a0001c0002t0001g0033 a0001c0001t0001g0041 a0001c0002t0001g0033	2	177	0.0113	16	c.63 others(25): Show c.635_*650dupTCTATCTATCTATCTA	THOC1	ENSG00000079134.13	transcript	ENST00000261600.11	protein_coding		544		chr18	TogoVar
THOC2_chrX_123595569_123738052	123629206	A A	AACACACA others(9): Show AACACACACACACACAC	intron_variant intron_variant	MODIFIER	NA18987.hp2 NA18987.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0031 a0001c0001t0001g0031	1	33	0.0303	16	c.248 others(35): Show c.2482-1254_2482-1239dupGTGTGTGTGTGTGTGT	THOC2	ENSG00000125676.20	transcript	ENST00000245838.13	protein_coding	22/38			chrX	TogoVar
THOC2_chrX_123595569_123738052	123703890	T T	TAAAAAAA others(9): Show TAAAAAAAAAAAAAAAA	intron_variant intron_variant	MODIFIER	HG02258.hp1 HG02258.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0161 a0001c0001t0001g0161	1	11	0.0909	16	c.223 others(31): Show c.223-401_223-386dupTTTTTTTTTTTTTTTT	THOC2	ENSG00000125676.20	transcript	ENST00000245838.13	protein_coding	3/38			chrX	TogoVar
THOC3_chr5_175954531_175973315	175962415	T T	TACACACA others(9): Show TACACACACACACACAC	intron_variant intron_variant	MODIFIER	NA19062.hp2 NA19062.hp2	a0001 a0001	a0001c0003 a0001c0003	a0001c0003t0001 a0001c0003t0001	a0001c0003t0001g0064 a0001c0003t0001g0064	1	209	0.0048	16	c.630 others(31): Show c.630-982_630-981insGTGTGTGTGTGTGTGT	THOC3	ENSG00000051596.10	transcript	ENST00000265097.9	protein_coding	3/5			chr5	TogoVar
THOC3_chr5_175954531_175973315	175962417	T T	TACACACA others(9): Show TACACACACACACACAC	intron_variant intron_variant	MODIFIER	HG01943.hp2 HG01952.hp1 HG03516.hp1 HG01943.hp2 HG01952.hp1 HG03516.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0003 a0001c0001t0004 a0001c0001t0003 a0001c0001t0004	a0001c0001t0003g0087 a0001c0001t0004g0019 a0001c0001t0003g0087 a0001c0001t0004g0019	3	82	0.0366	16	c.630 others(31): Show c.630-984_630-983insGTGTGTGTGTGTGTGT	THOC3	ENSG00000051596.10	transcript	ENST00000265097.9	protein_coding	3/5			chr5	TogoVar
THOC3_chr5_175954531_175973315	175962421	T T	TACACACA others(9): Show TACACACACACACACAC	intron_variant intron_variant	MODIFIER	NA19043.hp1 NA19240.hp2 NA19043.hp1 NA19240.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0003 a0001c0001t0003	a0001c0001t0003g0044 a0001c0001t0003g0045 a0001c0001t0003g0044 a0001c0001t0003g0045	2	55	0.0364	16	c.630 others(32): Show c.630-1003_630-988dupGTGTGTGTGTGTGTGT	THOC3	ENSG00000051596.10	transcript	ENST00000265097.9	protein_coding	3/5			chr5	TogoVar
THOP1_chr19_2780503_2820807	2786765	A A	ATTTTTTT others(9): Show ATTTTTTTTTTTTTTTT	intron_variant intron_variant	MODIFIER	HG02615.hp1 HG02809.hp2 HG02895.hp1 others(2): Show HG02615.hp1 HG02809.hp2 HG02895.hp1 HG02897.hp1 HG03516.hp2	a0001 a0001	a0001c0001 a0001c0002 a0001c0001 a0001c0002	a0001c0001t0011 a0001c0002t0006 a0001c0001t0011 a0001c0002t0006	a0001c0001t0011g0058 a0001c0002t0006g0037 a0001c0002t0006g0155 others(1): Show a0001c0001t0011g0058 a0001c0002t0006g0037 a0001c0002t0006g0155 a0001c0002t0006g0156	5	141	0.0355	16	c.16+ others(31): Show c.16+1102_16+1103insTTTTTTTTTTTTTTTT	THOP1	ENSG00000172009.15	transcript	ENST00000307741.11	protein_coding	1/12		INFO_REALIGN_3_PRIME	chr19	TogoVar
THOP1_chr19_2780503_2820807	2802459	C C	CCACCTCC others(9): Show CCACCTCCCGACACCAA	intron_variant intron_variant	MODIFIER	NA18980.hp2 NA18980.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0002 a0001c0001t0002	a0001c0001t0002g0090 a0001c0001t0002g0090	1	367	0.0027	16	c.590 others(33): Show c.590-2518_590-2503dupCCGACACCAACACCTC	THOP1	ENSG00000172009.15	transcript	ENST00000307741.11	protein_coding	5/12		INFO_REALIGN_3_PRIME	chr19	TogoVar
THRAP3_chr1_36219443_36310357	36220972	A A	AAAAAAAA others(9): Show AAAAAAAAAAAAAATAT	upstream_gene_variant upstream_gene_variant	MODIFIER	HG03540.hp2 HG03540.hp2	a0003 a0003	a0003c0004 a0003c0004	a0003c0004t0002 a0003c0004t0002	a0003c0004t0002g0024 a0003c0004t0002g0024	1	183	0.0055	16	c.-36 others(27): Show c.-3668_-3667insAAAAAAAAAAAAATAT	THRAP3	ENSG00000054118.15	transcript	ENST00000354618.10	protein_coding		3470		chr1	TogoVar
THRAP3_chr1_36219443_36310357	36220972	A A	AAAAAAAA others(9): Show AAAAAAAAAATATATAT	upstream_gene_variant upstream_gene_variant	MODIFIER	HG03139.hp2 HG03195.hp2 HG03139.hp2 HG03195.hp2	a0003 a0003	a0003c0004 a0003c0004	a0003c0004t0002 a0003c0004t0002	a0003c0004t0002g0002 a0003c0004t0002g0029 a0003c0004t0002g0002 a0003c0004t0002g0029	2	184	0.0109	16	c.-36 others(27): Show c.-3668_-3667insAAAAAAAAATATATAT	THRAP3	ENSG00000054118.15	transcript	ENST00000354618.10	protein_coding		3470		chr1	TogoVar
THRAP3_chr1_36219443_36310357	36220972	A A	AATATATA others(9): Show AATATATATATATATAT	upstream_gene_variant upstream_gene_variant	MODIFIER	HG02896.hp2 HG02896.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0005 a0001c0001t0005	a0001c0001t0005g0076 a0001c0001t0005g0076	1	183	0.0055	16	c.-36 others(27): Show c.-3668_-3667insATATATATATATATAT	THRAP3	ENSG00000054118.15	transcript	ENST00000354618.10	protein_coding		3470		chr1	TogoVar
THRAP3_chr1_36219443_36310357	36241428	T T	TATATATA others(9): Show TATATATATATATATAC	intron_variant intron_variant	MODIFIER	HG02109.hp1 HG02109.hp1	a0002 a0002	a0002c0003 a0002c0003	a0002c0003t0004 a0002c0003t0004	a0002c0003t0004g0041 a0002c0003t0004g0041	1	48	0.0208	16	c.-13 others(37): Show c.-135+16924_-135+16925insTATATATATATATACA	THRAP3	ENSG00000054118.15	transcript	ENST00000354618.10	protein_coding	1/11		INFO_REALIGN_3_PRIME	chr1	TogoVar
THRAP3_chr1_36219443_36310357	36249685	A A	AGTGTGTG others(9): Show AGTGTGTGTGTGTGTGT	intron_variant intron_variant	MODIFIER	HG01978.hp2 NA20752.hp1 HG01978.hp2 NA20752.hp1	a0001 a0001	a0001c0001 a0001c0002 a0001c0001 a0001c0002	a0001c0001t0001 a0001c0002t0001 a0001c0001t0001 a0001c0002t0001	a0001c0001t0001g0168 a0001c0002t0001g0193 a0001c0001t0001g0168 a0001c0002t0001g0193	2	31	0.0645	16	c.-13 others(35): Show c.-134-9677_-134-9662dupTGTGTGTGTGTGTGTG	THRAP3	ENSG00000054118.15	transcript	ENST00000354618.10	protein_coding	1/11		INFO_REALIGN_3_PRIME	chr1	TogoVar
THRAP3_chr1_36219443_36310357	36292256	C C	CTTTTTTT others(9): Show CTTTTTTTTTTTTTTTT	intron_variant intron_variant	MODIFIER	HG00741.hp2 HG00741.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0155 a0001c0001t0001g0155	1	103	0.0097	16	c.191 others(33): Show c.1919-339_1919-338insTTTTTTTTTTTTTTTT	THRAP3	ENSG00000054118.15	transcript	ENST00000354618.10	protein_coding	6/11		INFO_REALIGN_3_PRIME	chr1	TogoVar
THRAP3_chr1_36219443_36310357	36293640	C C	CTGTGTGT others(9): Show CTGTGTGTGTGTGTGTG	intron_variant intron_variant	MODIFIER	HG01257.hp2 HG01258.hp2 HG01261.hp1 others(7): Show HG01257.hp2 HG01258.hp2 HG01261.hp1 HG01978.hp1 HG02145.hp1 HG02258.hp2 HG02723.hp1 NA18974.hp2 NA18995.hp1 NA19009.hp2	a0001 a0003 a0001 a0003	a0001c0001 a0003c0007 a0001c0001 a0003c0007	a0001c0001t0001 a0001c0001t0007 a0003c0007t0007 a0001c0001t0001 a0001c0001t0007 a0003c0007t0007	a0001c0001t0001g0074 a0001c0001t0001g0085 a0001c0001t0001g0086 others(7): Show a0001c0001t0001g0074 a0001c0001t0001g0085 a0001c0001t0001g0086 a0001c0001t0001g0108 a0001c0001t0001g0124 a0001c0001t0001g0135 a0001c0001t0001g0164 a0001c0001t0007g0141 a0003c0007t0007g0063 a0003c0007t0007g0064	10	20	0.5000	16	c.203 others(33): Show c.2031-187_2031-172dupGTGTGTGTGTGTGTGT	THRAP3	ENSG00000054118.15	transcript	ENST00000354618.10	protein_coding	7/11		INFO_REALIGN_3_PRIME	chr1	TogoVar
THRAP3_chr1_36219443_36310357	36295545	T T	TTTCCTTC others(9): Show TTTCCTTCCTTCCTTCC	intron_variant intron_variant	MODIFIER	HG01069.hp2 HG02486.hp2 HG02572.hp1 others(9): Show HG01069.hp2 HG02486.hp2 HG02572.hp1 HG02735.hp1 HG02895.hp1 HG02896.hp1 HG02976.hp1 HG03209.hp2 HG03516.hp1 HG03579.hp2 NA19030.hp1 NA19240.hp1	a0001 a0002 a0003 a0001 a0002 a0003	a0001c0001 a0002c0005 a0003c0004 a0001c0001 a0002c0005 a0003c0004	a0001c0001t0001 a0002c0005t0001 a0002c0005t0012 others(1): Show a0001c0001t0001 a0002c0005t0001 a0002c0005t0012 a0003c0004t0008	a0001c0001t0001g0132 a0002c0005t0001g0047 a0002c0005t0001g0049 others(9): Show a0001c0001t0001g0132 a0002c0005t0001g0047 a0002c0005t0001g0049 a0002c0005t0001g0050 a0002c0005t0001g0053 a0002c0005t0001g0058 a0002c0005t0001g0061 a0002c0005t0012g0055 a0003c0004t0008g0014 a0003c0004t0008g0015 a0003c0004t0008g0016 a0003c0004t0008g0017	12	61	0.1967	16	c.211 others(35): Show c.2116-1021_2116-1006dupTTCCTTCCTTCCTTCC	THRAP3	ENSG00000054118.15	transcript	ENST00000354618.10	protein_coding	8/11		INFO_REALIGN_3_PRIME	chr1	TogoVar
THRAP3_chr1_36219443_36310357	36295579	T T	TCCTCCCT others(9): Show TCCTCCCTTCCTTCCTC	intron_variant intron_variant	MODIFIER	HG00558.hp2 HG00558.hp2	a0002 a0002	a0002c0003 a0002c0003	a0002c0003t0005 a0002c0003t0005	a0002c0003t0005g0011 a0002c0003t0005g0011	1	242	0.0041	16	c.211 others(33): Show c.2116-990_2116-975dupCTCCCTCCCTTCCTTC	THRAP3	ENSG00000054118.15	transcript	ENST00000354618.10	protein_coding	8/11		INFO_REALIGN_3_PRIME	chr1	TogoVar
THRA_chr17_40057965_40098002	40091231	T T	TACACACA others(9): Show TACACACACACACACAC	3_prime_UTR_variant 3_prime_UTR_variant	MODIFIER	NA20129.hp1 NA20129.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0053 a0001c0001t0053	a0001c0001t0053g0022 a0001c0001t0053g0022	1	87	0.0115	16	c.18 others(27): Show c.1800_*1815dupACACACACACACACAC	THRA	ENSG00000126351.13	transcript	ENST00000450525.7	protein_coding	9/9	1816	INFO_REALIGN_3_PRIME	chr17	TogoVar
THRB_chr3_24112153_24499850	24135820	C C	CATATATA others(9): Show CATATATATATATATAT	intron_variant intron_variant	MODIFIER	NA18522.hp2 NA18522.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0024 a0001c0001t0024	a0001c0001t0024g0020 a0001c0001t0024g0020	1	108	0.0093	16	c.739 others(33): Show c.739-2374_739-2359dupATATATATATATATAT	THRB	ENSG00000151090.20	transcript	ENST00000646209.2	protein_coding	8/10			chr3	TogoVar
THRB_chr3_24112153_24499850	24135846	T T	TATATATA others(9): Show TATATATATATATATAA	intron_variant intron_variant	MODIFIER	HG01884.hp1 HG02622.hp1 NA18906.hp2 HG01884.hp1 HG02622.hp1 NA18906.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0004 a0001c0001t0004	a0001c0001t0004g0058 a0001c0001t0004g0104 a0001c0001t0004g0174 a0001c0001t0004g0058 a0001c0001t0004g0104 a0001c0001t0004g0174	3	171	0.0175	16	c.739 others(33): Show c.739-2385_739-2384insTTATATATATATATAT	THRB	ENSG00000151090.20	transcript	ENST00000646209.2	protein_coding	8/10			chr3	TogoVar
THRB_chr3_24112153_24499850	24161617	A A	AACACACA others(9): Show AACACACACACACACAC	intron_variant intron_variant	MODIFIER	HG00323.hp2 HG02015.hp1 HG02257.hp1 others(1): Show HG00323.hp2 HG02015.hp1 HG02257.hp1 NA19010.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0002 a0001c0001t0045 a0001c0001t0002 a0001c0001t0045	a0001c0001t0002g0036 a0001c0001t0002g0107 a0001c0001t0002g0120 others(1): Show a0001c0001t0002g0036 a0001c0001t0002g0107 a0001c0001t0002g0120 a0001c0001t0045g0076	4	23	0.1739	16	c.284 others(33): Show c.284-9143_284-9128dupGTGTGTGTGTGTGTGT	THRB	ENSG00000151090.20	transcript	ENST00000646209.2	protein_coding	5/10			chr3	TogoVar
THRB_chr3_24112153_24499850	24188858	A A	AATATATA others(9): Show AATATATATATATATAT	intron_variant intron_variant	MODIFIER	HG02280.hp2 HG02738.hp2 HG03139.hp1 others(2): Show HG02280.hp2 HG02738.hp2 HG03139.hp1 HG03195.hp1 NA18612.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0002 a0001c0001t0009 a0001c0001t0010 others(2): Show a0001c0001t0002 a0001c0001t0009 a0001c0001t0010 a0001c0001t0022 a0001c0001t0029	a0001c0001t0002g0070 a0001c0001t0009g0097 a0001c0001t0010g0173 others(2): Show a0001c0001t0002g0070 a0001c0001t0009g0097 a0001c0001t0010g0173 a0001c0001t0022g0105 a0001c0001t0029g0010	5	54	0.0926	16	c.283 others(33): Show c.283+1200_283+1215dupATATATATATATATAT	THRB	ENSG00000151090.20	transcript	ENST00000646209.2	protein_coding	5/10			chr3	TogoVar
THRB_chr3_24112153_24499850	24233560	G G	GAAGAAAG others(9): Show GAAGAAAGAAAGAAAGA	intron_variant intron_variant	MODIFIER	HG01167.hp2 HG01255.hp2 HG03098.hp1 others(2): Show HG01167.hp2 HG01255.hp2 HG03098.hp1 NA18612.hp2 NA18944.hp1	a0001 a0001	a0001c0001 a0001c0002 a0001c0001 a0001c0002	a0001c0001t0002 a0001c0001t0014 a0001c0002t0003 a0001c0001t0002 a0001c0001t0014 a0001c0002t0003	a0001c0001t0002g0070 a0001c0001t0002g0091 a0001c0001t0002g0167 others(2): Show a0001c0001t0002g0070 a0001c0001t0002g0091 a0001c0001t0002g0167 a0001c0001t0014g0089 a0001c0002t0003g0030	5	96	0.0521	16	c.-42 others(33): Show c.-42-4575_-42-4560dupTCTTTCTTTCTTTCTT	THRB	ENSG00000151090.20	transcript	ENST00000646209.2	protein_coding	3/10			chr3	TogoVar
THRB_chr3_24112153_24499850	24233560	G G	GAAGGAAG others(9): Show GAAGGAAGAAAGAAAGA	intron_variant intron_variant	MODIFIER	HG03130.hp2 HG03130.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0030 a0001c0001t0030	a0001c0001t0030g0033 a0001c0001t0030g0033	1	92	0.0109	16	c.-42 others(33): Show c.-42-4560_-42-4559insTCTTTCTTTCTTCCTT	THRB	ENSG00000151090.20	transcript	ENST00000646209.2	protein_coding	3/10			chr3	TogoVar
THRB_chr3_24112153_24499850	24240840	C C	CTGATCCT others(9): Show CTGATCCTCATCCATTT	intron_variant intron_variant	MODIFIER	HG02630.hp2 HG02895.hp1 HG03041.hp1 others(1): Show HG02630.hp2 HG02895.hp1 HG03041.hp1 NA18906.hp2	a0001 a0002 a0001 a0002	a0001c0001 a0001c0002 a0002c0003 a0001c0001 a0001c0002 a0002c0003	a0001c0001t0004 a0001c0002t0003 a0002c0003t0008 a0001c0001t0004 a0001c0002t0003 a0002c0003t0008	a0001c0001t0004g0014 a0001c0001t0004g0104 a0001c0002t0003g0032 others(1): Show a0001c0001t0004g0014 a0001c0001t0004g0104 a0001c0002t0003g0032 a0002c0003t0008g0168	4	174	0.0230	16	c.-42 others(35): Show c.-42-11840_-42-11839insAAATGGATGAGGATCA	THRB	ENSG00000151090.20	transcript	ENST00000646209.2	protein_coding	3/10			chr3	TogoVar
THSD4_chr15_71110471_71788383	71263331	G G	GTATATAT others(9): Show GTATATATATATATATA	intron_variant intron_variant	MODIFIER	HG03516.hp2 HG03516.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0010 a0001c0001t0010	a0001c0001t0010g0053 a0001c0001t0010g0053	1	2	0.5000	16	c.101 others(35): Show c.1015+6617_1015+6632dupTATATATATATATATA	THSD4	ENSG00000187720.15	transcript	ENST00000261862.8	protein_coding	6/17		INFO_REALIGN_3_PRIME	chr15	TogoVar
THSD4_chr15_71110471_71788383	71277128	C C	CTTTTTTT others(9): Show CTTTTTTTTTTTTTTTT	intron_variant intron_variant	MODIFIER	HG01109.hp1 HG01169.hp2 HG01243.hp1 others(3): Show HG01109.hp1 HG01169.hp2 HG01243.hp1 HG01243.hp2 HG03130.hp1 HG03139.hp2	a0001 a0002 a0001 a0002	a0001c0001 a0001c0003 a0001c0019 others(1): Show a0001c0001 a0001c0003 a0001c0019 a0002c0005	a0001c0001t0001 a0001c0001t0008 a0001c0001t0034 others(3): Show a0001c0001t0001 a0001c0001t0008 a0001c0001t0034 a0001c0003t0003 a0001c0019t0003 a0002c0005t0019	a0001c0001t0001g0096 a0001c0001t0008g0037 a0001c0001t0034g0006 others(3): Show a0001c0001t0001g0096 a0001c0001t0008g0037 a0001c0001t0034g0006 a0001c0003t0003g0071 a0001c0019t0003g0093 a0002c0005t0019g0004	6	47	0.1277	16	c.101 others(37): Show c.1015+20427_1015+20428insTTTTTTTTTTTTTTTT	THSD4	ENSG00000187720.15	transcript	ENST00000261862.8	protein_coding	6/17		INFO_REALIGN_3_PRIME	chr15	TogoVar
THSD4_chr15_71110471_71788383	71326698	A A	AATATATA others(9): Show AATATATATATATATAT	intron_variant intron_variant	MODIFIER	HG01081.hp1 HG01081.hp1	a0001 a0001	a0001c0002 a0001c0002	a0001c0002t0043 a0001c0002t0043	a0001c0002t0043g0076 a0001c0002t0043g0076	1	76	0.0132	16	c.101 others(37): Show c.1015+69984_1015+69985insTATATATATATATATA	THSD4	ENSG00000187720.15	transcript	ENST00000261862.8	protein_coding	6/17		INFO_REALIGN_3_PRIME	chr15	TogoVar
THSD4_chr15_71110471_71788383	71326700	A A	AAAATATA others(9): Show AAAATATATATATATAT	intron_variant intron_variant	MODIFIER	HG02818.hp2 HG02818.hp2	a0002 a0002	a0002c0005 a0002c0005	a0002c0005t0033 a0002c0005t0033	a0002c0005t0033g0040 a0002c0005t0033g0040	1	22	0.0455	16	c.101 others(37): Show c.1015+69986_1015+69987insAATATATATATATATA	THSD4	ENSG00000187720.15	transcript	ENST00000261862.8	protein_coding	6/17		INFO_REALIGN_3_PRIME	chr15	TogoVar
THSD4_chr15_71110471_71788383	71332891	C C	CTTTTTTT others(9): Show CTTTTTTTTTTTTTTTT	intron_variant intron_variant	MODIFIER	HG00642.hp1 HG02735.hp2 HG02738.hp1 others(1): Show HG00642.hp1 HG02735.hp2 HG02738.hp1 HG03540.hp1	a0001 a0001	a0001c0001 a0001c0002 a0001c0003 a0001c0001 a0001c0002 a0001c0003	a0001c0001t0011 a0001c0001t0028 a0001c0002t0002 others(1): Show a0001c0001t0011 a0001c0001t0028 a0001c0002t0002 a0001c0003t0014	a0001c0001t0011g0028 a0001c0001t0028g0009 a0001c0002t0002g0073 others(1): Show a0001c0001t0011g0028 a0001c0001t0028g0009 a0001c0002t0002g0073 a0001c0003t0014g0116	4	103	0.0388	16	c.101 others(37): Show c.1015+76176_1015+76177insTTTTTTTTTTTTTTTT	THSD4	ENSG00000187720.15	transcript	ENST00000261862.8	protein_coding	6/17			chr15	TogoVar
THSD4_chr15_71110471_71788383	71365131	T T	TTGTGTGT others(9): Show TTGTGTGTGTGTGTGTG	intron_variant intron_variant	MODIFIER	HG01978.hp1 HG02055.hp1 NA19009.hp1 HG01978.hp1 HG02055.hp1 NA19009.hp1	a0001 a0004 a0007 a0001 a0004 a0007	a0001c0002 a0004c0014 a0007c0017 a0001c0002 a0004c0014 a0007c0017	a0001c0002t0006 a0004c0014t0038 a0007c0017t0023 a0001c0002t0006 a0004c0014t0038 a0007c0017t0023	a0001c0002t0006g0026 a0004c0014t0038g0016 a0007c0017t0023g0105 a0001c0002t0006g0026 a0004c0014t0038g0016 a0007c0017t0023g0105	3	21	0.1429	16	c.101 others(37): Show c.1016-46536_1016-46521dupGTGTGTGTGTGTGTGT	THSD4	ENSG00000187720.15	transcript	ENST00000261862.8	protein_coding	6/17		INFO_REALIGN_3_PRIME	chr15	TogoVar
THSD4_chr15_71110471_71788383	71395914	G G	GACACACA others(9): Show GACACACACACACACAC	intron_variant intron_variant	MODIFIER	HG03516.hp2 HG03516.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0010 a0001c0001t0010	a0001c0001t0010g0053 a0001c0001t0010g0053	1	48	0.0208	16	c.101 others(37): Show c.1016-15749_1016-15734dupCACACACACACACACA	THSD4	ENSG00000187720.15	transcript	ENST00000261862.8	protein_coding	6/17		INFO_REALIGN_3_PRIME	chr15	TogoVar
THSD4_chr15_71110471_71788383	71395914	G G	GAGACACA others(9): Show GAGACACACACACACAC	intron_variant intron_variant	MODIFIER	HG03579.hp2 HG03579.hp2	a0002 a0002	a0002c0005 a0002c0005	a0002c0005t0004 a0002c0005t0004	a0002c0005t0004g0065 a0002c0005t0004g0065	1	48	0.0208	16	c.101 others(37): Show c.1016-15772_1016-15771insGACACACACACACACA	THSD4	ENSG00000187720.15	transcript	ENST00000261862.8	protein_coding	6/17		INFO_REALIGN_3_PRIME	chr15	TogoVar
THSD4_chr15_71110471_71788383	71442660	G G	GTGTGTGT others(9): Show GTGTGTGTATGTATGTA	intron_variant intron_variant	MODIFIER	HG02257.hp1 HG02451.hp1 HG03486.hp1 HG02257.hp1 HG02451.hp1 HG03486.hp1	a0001 a0001	a0001c0002 a0001c0003 a0001c0002 a0001c0003	a0001c0002t0002 a0001c0002t0005 a0001c0003t0002 a0001c0002t0002 a0001c0002t0005 a0001c0003t0002	a0001c0002t0002g0043 a0001c0002t0005g0045 a0001c0003t0002g0050 a0001c0002t0002g0043 a0001c0002t0005g0045 a0001c0003t0002g0050	3	61	0.0492	16	c.115 others(37): Show c.1152+30838_1152+30839insGTGTGTATGTATGTAT	THSD4	ENSG00000187720.15	transcript	ENST00000261862.8	protein_coding	7/17		INFO_REALIGN_3_PRIME	chr15	TogoVar
THSD4_chr15_71110471_71788383	71532263	T T	TGAGAGAG others(9): Show TGAGAGAGAGAGAGAGA	intron_variant intron_variant	MODIFIER	HG02572.hp2 HG02572.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0003 a0001c0001t0003	a0001c0001t0003g0046 a0001c0001t0003g0046	1	66	0.0152	16	c.115 others(39): Show c.1152+120446_1152+120461dupAGAGAGAGAGAGAGAG	THSD4	ENSG00000187720.15	transcript	ENST00000261862.8	protein_coding	7/17		INFO_REALIGN_3_PRIME	chr15	TogoVar

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