Joint Open Genome and Omics Platform (JoGo)

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Snpeff annotation impact detail

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regionname	pos	ref	alt	annotation	impact	samples	ahapids	chapids	thapids	thapids	ac	an	af	len	hgvs_c	genename	geneid	featuretype	featureid	transcript_biotype	rank	distance	status	chr	external
TRAPPC3L_chr6_116489989_116550684	116494961	A A	ATATATAT others(9): Show ATATATATATATATTTT	downstream_gene_variant downstream_gene_variant	MODIFIER	NA18951.hp2 NA18993.hp1 NA18951.hp2 NA18993.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0002 a0001c0001t0001 a0001c0001t0002	a0001c0001t0001g0250 a0001c0001t0002g0001 a0001c0001t0001g0250 a0001c0001t0002g0001	2	132	0.0152	16	c.19 others(27): Show c.1992_*1993insAAAATATATATATATA	TRAPPC3L	ENSG00000173626.10	transcript	ENST00000368602.4	protein_coding		27		chr6	TogoVar
TRAPPC3L_chr6_116489989_116550684	116494961	A A	ATATATAT others(9): Show ATATATATATATTTTTT	downstream_gene_variant downstream_gene_variant	MODIFIER	HG00738.hp2 HG01071.hp1 HG01074.hp2 others(7): Show HG00738.hp2 HG01071.hp1 HG01074.hp2 HG01081.hp1 HG01261.hp2 HG01346.hp2 HG01361.hp2 HG01981.hp2 HG02145.hp2 NA19068.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0002 a0001c0001t0001 a0001c0001t0002	a0001c0001t0001g0253 a0001c0001t0001g0300 a0001c0001t0002g0118 others(7): Show a0001c0001t0001g0253 a0001c0001t0001g0300 a0001c0001t0002g0118 a0001c0001t0002g0126 a0001c0001t0002g0128 a0001c0001t0002g0129 a0001c0001t0002g0137 a0001c0001t0002g0158 a0001c0001t0002g0165 a0001c0001t0002g0197	10	140	0.0714	16	c.19 others(27): Show c.1992_*1993insAAAAAATATATATATA	TRAPPC3L	ENSG00000173626.10	transcript	ENST00000368602.4	protein_coding		27		chr6	TogoVar
TRAPPC3L_chr6_116489989_116550684	116494961	A A	ATATATAT others(9): Show ATATATATATTTTTTTT	downstream_gene_variant downstream_gene_variant	MODIFIER	HG00609.hp1 HG01175.hp1 HG01515.hp2 others(3): Show HG00609.hp1 HG01175.hp1 HG01515.hp2 HG02735.hp1 HG04228.hp1 NA19000.hp1	a0001 a0002 a0001 a0002	a0001c0001 a0002c0003 a0001c0001 a0002c0003	a0001c0001t0002 a0001c0001t0015 a0002c0003t0001 a0001c0001t0002 a0001c0001t0015 a0002c0003t0001	a0001c0001t0002g0025 a0001c0001t0002g0150 a0001c0001t0002g0153 others(3): Show a0001c0001t0002g0025 a0001c0001t0002g0150 a0001c0001t0002g0153 a0001c0001t0002g0196 a0001c0001t0015g0109 a0002c0003t0001g0209	6	136	0.0441	16	c.19 others(27): Show c.1992_*1993insAAAAAAAATATATATA	TRAPPC3L	ENSG00000173626.10	transcript	ENST00000368602.4	protein_coding		27		chr6	TogoVar
TRAPPC3L_chr6_116489989_116550684	116544151	A A	AAGAGAGA others(9): Show AAGAGAGAGAGAGAGAG	intron_variant intron_variant	MODIFIER	HG01361.hp2 HG01952.hp2 HG01981.hp2 others(5): Show HG01361.hp2 HG01952.hp2 HG01981.hp2 HG02145.hp2 NA18965.hp1 NA18977.hp2 NA18983.hp2 NA19089.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0002 a0001c0001t0001 a0001c0001t0002	a0001c0001t0001g0123 a0001c0001t0002g0122 a0001c0001t0002g0124 others(5): Show a0001c0001t0001g0123 a0001c0001t0002g0122 a0001c0001t0002g0124 a0001c0001t0002g0125 a0001c0001t0002g0126 a0001c0001t0002g0127 a0001c0001t0002g0128 a0001c0001t0002g0129	8	181	0.0442	16	c.43- others(29): Show c.43-767_43-752dupCTCTCTCTCTCTCTCT	TRAPPC3L	ENSG00000173626.10	transcript	ENST00000368602.4	protein_coding	1/4			chr6	TogoVar
TRAPPC6B_chr14_39142814_39175333	39172284	G G	GGTGTGTG others(9): Show GGTGTGTGTGTGTGTGT	upstream_gene_variant upstream_gene_variant	MODIFIER	HG00099.hp2 HG00323.hp1 HG00609.hp2 others(43): Show HG00099.hp2 HG00323.hp1 HG00609.hp2 HG00735.hp2 HG01070.hp1 HG01071.hp2 HG01074.hp2 HG01123.hp2 HG01169.hp2 HG01257.hp1 HG01496.hp1 HG01952.hp2 HG02145.hp1 HG02293.hp2 HG02300.hp1 HG02602.hp2 HG02615.hp2 HG02683.hp2 HG02717.hp1 HG02970.hp2 HG03225.hp1 HG03239.hp1 HG03486.hp2 HG03491.hp2 HG03492.hp1 HG03516.hp1 HG03688.hp1 HG03710.hp1 HG03710.hp2 HG03834.hp1 HG04199.hp2 NA18522.hp1 NA18954.hp1 NA18978.hp1 NA18994.hp2 NA18999.hp2 NA19007.hp1 NA19011.hp1 NA19030.hp1 NA19062.hp1 NA19074.hp1 NA19078.hp2 NA19091.hp1 NA19240.hp1 NA20300.hp1 NA20805.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0002 a0001c0001t0003 others(5): Show a0001c0001t0001 a0001c0001t0002 a0001c0001t0003 a0001c0001t0004 a0001c0001t0005 a0001c0001t0008 a0001c0001t0015 a0001c0001t0022	a0001c0001t0001g0001 a0001c0001t0001g0039 a0001c0001t0001g0155 others(18): Show a0001c0001t0001g0001 a0001c0001t0001g0039 a0001c0001t0001g0155 a0001c0001t0002g0126 a0001c0001t0003g0004 a0001c0001t0003g0149 a0001c0001t0003g0161 a0001c0001t0003g0165 a0001c0001t0003g0166 a0001c0001t0003g0172 a0001c0001t0003g0176 a0001c0001t0003g0180 a0001c0001t0004g0002 a0001c0001t0004g0017 a0001c0001t0004g0066 a0001c0001t0004g0074 a0001c0001t0005g0015 a0001c0001t0008g0022 a0001c0001t0008g0117 a0001c0001t0015g0108 a0001c0001t0022g0164	46	83	0.5542	16	c.-21 others(27): Show c.-2190_-2189insACACACACACACACAC	TRAPPC6B	ENSG00000182400.15	transcript	ENST00000330149.10	protein_coding		1952		chr14	TogoVar
TRAPPC8_chr18_31824197_31948128	31876489	C C	CAAAAAAA others(9): Show CAAAAAAAAAAAAAAAA	intron_variant intron_variant	MODIFIER	HG00639.hp2 HG01167.hp1 HG01169.hp1 others(9): Show HG00639.hp2 HG01167.hp1 HG01169.hp1 HG01516.hp1 HG01884.hp1 HG02615.hp2 HG02809.hp2 HG02922.hp2 HG02965.hp1 HG03654.hp2 HG03688.hp1 NA18974.hp1	a0001 a0004 a0007 others(1): Show a0001 a0004 a0007 a0013	a0001c0001 a0004c0008 a0007c0016 others(1): Show a0001c0001 a0004c0008 a0007c0016 a0013c0015	a0001c0001t0001 a0001c0001t0003 a0001c0001t0006 others(3): Show a0001c0001t0001 a0001c0001t0003 a0001c0001t0006 a0004c0008t0001 a0007c0016t0012 a0013c0015t0001	a0001c0001t0001g0165 a0001c0001t0001g0168 a0001c0001t0001g0171 others(9): Show a0001c0001t0001g0165 a0001c0001t0001g0168 a0001c0001t0001g0171 a0001c0001t0001g0180 a0001c0001t0003g0298 a0001c0001t0003g0307 a0001c0001t0006g0217 a0001c0001t0006g0236 a0004c0008t0001g0025 a0004c0008t0001g0047 a0007c0016t0012g0020 a0013c0015t0001g0221	12	198	0.0606	16	c.172 others(35): Show c.1729-1801_1729-1786dupTTTTTTTTTTTTTTTT	TRAPPC8	ENSG00000153339.15	transcript	ENST00000283351.10	protein_coding	12/28			chr18	TogoVar
TRAPPC8_chr18_31824197_31948128	31932997	C C	CAAAAAAA others(9): Show CAAAAAAAAAAAAAAAA	intron_variant intron_variant	MODIFIER	HG03209.hp1 NA18906.hp1 HG03209.hp1 NA18906.hp1	a0002 a0002	a0002c0002 a0002c0002	a0002c0002t0002 a0002c0002t0002	a0002c0002t0002g0142 a0002c0002t0002g0143 a0002c0002t0002g0142 a0002c0002t0002g0143	2	114	0.0175	16	c.158 others(33): Show c.158-1490_158-1475dupTTTTTTTTTTTTTTTT	TRAPPC8	ENSG00000153339.15	transcript	ENST00000283351.10	protein_coding	1/28			chr18	TogoVar
TRAPPC8_chr18_31824197_31948128	31933004	A A	AAAAAAAA others(9): Show AAAAAAAAAAAAAAAAG	intron_variant intron_variant	MODIFIER	HG02559.hp1 HG02559.hp1	a0003 a0003	a0003c0006 a0003c0006	a0003c0006t0007 a0003c0006t0007	a0003c0006t0007g0346 a0003c0006t0007g0346	1	348	0.0029	16	c.158 others(33): Show c.158-1482_158-1481insCTTTTTTTTTTTTTTT	TRAPPC8	ENSG00000153339.15	transcript	ENST00000283351.10	protein_coding	1/28			chr18	TogoVar
TRAPPC8_chr18_31824197_31948128	31933020	A A	AAAAAAAA others(9): Show AAAAAAAAAAAAAAAAG	intron_variant intron_variant	MODIFIER	HG02451.hp2 HG02451.hp2	a0003 a0003	a0003c0006 a0003c0006	a0003c0006t0007 a0003c0006t0007	a0003c0006t0007g0348 a0003c0006t0007g0348	1	338	0.0030	16	c.158 others(33): Show c.158-1498_158-1497insCTTTTTTTTTTTTTTT	TRAPPC8	ENSG00000153339.15	transcript	ENST00000283351.10	protein_coding	1/28			chr18	TogoVar
TRAPPC8_chr18_31824197_31948128	31934949	C C	CATAAATA others(9): Show CATAAATAAATAAATAA	intron_variant intron_variant	MODIFIER	HG00597.hp1 HG00733.hp2 HG00597.hp1 HG00733.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0250 a0001c0001t0001g0256 a0001c0001t0001g0250 a0001c0001t0001g0256	2	33	0.0606	16	c.158 others(33): Show c.158-3442_158-3427dupTTATTTATTTATTTAT	TRAPPC8	ENSG00000153339.15	transcript	ENST00000283351.10	protein_coding	1/28			chr18	TogoVar
TRAPPC8_chr18_31824197_31948128	31935548	T T	TAAAAAAA others(9): Show TAAAAAAAAAAAAAAAA	intron_variant intron_variant	MODIFIER	HG01884.hp2 HG02145.hp2 HG02615.hp2 others(2): Show HG01884.hp2 HG02145.hp2 HG02615.hp2 HG03209.hp2 HG03516.hp2	a0001 a0002 a0004 a0001 a0002 a0004	a0001c0001 a0002c0002 a0004c0008 a0001c0001 a0002c0002 a0004c0008	a0001c0001t0001 a0002c0002t0009 a0004c0008t0001 a0001c0001t0001 a0002c0002t0009 a0004c0008t0001	a0001c0001t0001g0160 a0001c0001t0001g0173 a0001c0001t0001g0182 others(2): Show a0001c0001t0001g0160 a0001c0001t0001g0173 a0001c0001t0001g0182 a0002c0002t0009g0174 a0004c0008t0001g0047	5	6	0.8333	16	c.158 others(33): Show c.158-4041_158-4026dupTTTTTTTTTTTTTTTT	TRAPPC8	ENSG00000153339.15	transcript	ENST00000283351.10	protein_coding	1/28			chr18	TogoVar
TRAPPC9_chr8_139722725_140462744	139784608	C C	CATACATA others(9): Show CATACATATATATATAT	intron_variant intron_variant	MODIFIER	HG01109.hp2 HG03139.hp1 HG03209.hp1 HG01109.hp2 HG03139.hp1 HG03209.hp1	a0001 a0001	a0001c0001 a0001c0003 a0001c0004 a0001c0001 a0001c0003 a0001c0004	a0001c0001t0029 a0001c0003t0014 a0001c0004t0004 a0001c0001t0029 a0001c0003t0014 a0001c0004t0004	a0001c0001t0029g0077 a0001c0003t0014g0026 a0001c0004t0004g0094 a0001c0001t0029g0077 a0001c0003t0014g0026 a0001c0004t0004g0094	3	8	0.3750	16	c.305 others(37): Show c.3056-52407_3056-52406insATATATATATATGTAT	TRAPPC9	ENSG00000167632.18	transcript	ENST00000438773.4	protein_coding	21/22			chr8	TogoVar
TRAPPC9_chr8_139722725_140462744	139804439	T T	TCACCACC others(9): Show TCACCACCACTCACCAC	intron_variant intron_variant	MODIFIER	HG00733.hp1 HG01192.hp2 HG01255.hp1 others(15): Show HG00733.hp1 HG01192.hp2 HG01255.hp1 HG01496.hp1 HG01884.hp2 HG01891.hp2 HG02109.hp2 HG02717.hp1 HG02723.hp2 HG02886.hp1 HG02896.hp2 HG02897.hp1 HG02922.hp2 HG02976.hp2 HG03041.hp1 HG03209.hp2 HG03490.hp1 NA18906.hp2	a0001 a0002 a0004 a0001 a0002 a0004	a0001c0001 a0001c0002 a0001c0003 others(8): Show a0001c0001 a0001c0002 a0001c0003 a0001c0004 a0001c0006 a0001c0007 a0001c0008 a0001c0009 a0001c0025 a0002c0023 a0004c0016	a0001c0001t0025 a0001c0002t0007 a0001c0002t0013 others(14): Show a0001c0001t0025 a0001c0002t0007 a0001c0002t0013 a0001c0002t0022 a0001c0003t0002 a0001c0003t0005 a0001c0003t0007 a0001c0004t0010 a0001c0004t0028 a0001c0006t0006 a0001c0007t0015 a0001c0008t0003 a0001c0008t0018 a0001c0009t0005 a0001c0025t0006 a0002c0023t0006 a0004c0016t0026	a0001c0001t0025g0082 a0001c0002t0007g0022 a0001c0002t0013g0005 others(15): Show a0001c0001t0025g0082 a0001c0002t0007g0022 a0001c0002t0013g0005 a0001c0002t0022g0006 a0001c0003t0002g0046 a0001c0003t0005g0017 a0001c0003t0007g0037 a0001c0004t0010g0089 a0001c0004t0010g0090 a0001c0004t0028g0098 a0001c0006t0006g0031 a0001c0007t0015g0015 a0001c0008t0003g0021 a0001c0008t0018g0023 a0001c0009t0005g0010 a0001c0025t0006g0032 a0002c0023t0006g0035 a0004c0016t0026g0069	18	96	0.1875	16	c.305 others(37): Show c.3056-72253_3056-72238dupGTGGTGAGTGGTGGTG	TRAPPC9	ENSG00000167632.18	transcript	ENST00000438773.4	protein_coding	21/22			chr8	TogoVar
TRAPPC9_chr8_139722725_140462744	139817045	A A	AACACACA others(9): Show AACACACACACACACAC	intron_variant intron_variant	MODIFIER	HG01169.hp1 HG03195.hp1 HG03195.hp2 HG01169.hp1 HG03195.hp1 HG03195.hp2	a0001 a0005 a0001 a0005	a0001c0003 a0001c0022 a0005c0021 a0001c0003 a0001c0022 a0005c0021	a0001c0003t0011 a0001c0022t0002 a0005c0021t0002 a0001c0003t0011 a0001c0022t0002 a0005c0021t0002	a0001c0003t0011g0011 a0001c0022t0002g0040 a0005c0021t0002g0029 a0001c0003t0011g0011 a0001c0022t0002g0040 a0005c0021t0002g0029	3	23	0.1304	16	c.305 others(37): Show c.3055+68818_3055+68833dupGTGTGTGTGTGTGTGT	TRAPPC9	ENSG00000167632.18	transcript	ENST00000438773.4	protein_coding	21/22			chr8	TogoVar
TRAPPC9_chr8_139722725_140462744	139947924	C C	CGAGAGAG others(9): Show CGAGAGAGAGAGAGAGA	intron_variant intron_variant	MODIFIER	HG03098.hp2 HG03098.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0075 a0001c0001t0001g0075	1	13	0.0769	16	c.281 others(37): Show c.2811-37640_2811-37625dupTCTCTCTCTCTCTCTC	TRAPPC9	ENSG00000167632.18	transcript	ENST00000438773.4	protein_coding	19/22			chr8	TogoVar
TRAPPC9_chr8_139722725_140462744	140019621	T T	TGGCTCAC others(9): Show TGGCTCACTGCAATCTC	intron_variant intron_variant	MODIFIER	HG02886.hp1 HG02886.hp1	a0001 a0001	a0001c0002 a0001c0002	a0001c0002t0022 a0001c0002t0022	a0001c0002t0022g0006 a0001c0002t0022g0006	1	96	0.0104	16	c.269 others(35): Show c.2699+4300_2699+4315dupGAGATTGCAGTGAGCC	TRAPPC9	ENSG00000167632.18	transcript	ENST00000438773.4	protein_coding	18/22			chr8	TogoVar
TRAPPC9_chr8_139722725_140462744	140122019	T T	TTCTCTCT others(9): Show TTCTCTCTCTCTCTCTC	intron_variant intron_variant	MODIFIER	HG01169.hp1 HG01169.hp1	a0001 a0001	a0001c0022 a0001c0022	a0001c0022t0002 a0001c0022t0002	a0001c0022t0002g0040 a0001c0022t0002g0040	1	82	0.0122	16	c.255 others(37): Show c.2557-97941_2557-97940insGAGAGAGAGAGAGAGA	TRAPPC9	ENSG00000167632.18	transcript	ENST00000438773.4	protein_coding	17/22			chr8	TogoVar
TRAPPC9_chr8_139722725_140462744	140124704	G G	GGGGGAGG others(9): Show GGGGGAGGACCCTCATA	intron_variant intron_variant	MODIFIER	HG00642.hp2 HG00733.hp1 HG00735.hp1 others(35): Show HG00642.hp2 HG00733.hp1 HG00735.hp1 HG01069.hp1 HG01069.hp2 HG01070.hp1 HG01071.hp2 HG01106.hp1 HG01169.hp1 HG01169.hp2 HG01255.hp1 HG01496.hp1 HG01496.hp2 HG01884.hp1 HG01884.hp2 HG01891.hp2 HG02109.hp2 HG02293.hp1 HG02293.hp2 HG02451.hp2 HG02717.hp2 HG02723.hp1 HG02809.hp1 HG02809.hp2 HG02886.hp2 HG02896.hp1 HG02896.hp2 HG02897.hp1 HG02922.hp2 HG02976.hp2 HG03041.hp1 HG03098.hp2 HG03195.hp1 HG03195.hp2 HG03209.hp1 HG03490.hp1 NA19030.hp1 NA21309.hp1	a0001 a0002 a0005 others(1): Show a0001 a0002 a0005 a0007	a0001c0001 a0001c0002 a0001c0003 others(12): Show a0001c0001 a0001c0002 a0001c0003 a0001c0004 a0001c0006 a0001c0008 a0001c0009 a0001c0012 a0001c0018 a0001c0020 a0001c0022 a0001c0025 a0002c0023 a0005c0021 a0007c0017	a0001c0001t0001 a0001c0001t0004 a0001c0001t0024 others(26): Show a0001c0001t0001 a0001c0001t0004 a0001c0001t0024 a0001c0002t0002 a0001c0002t0003 a0001c0002t0007 a0001c0002t0019 a0001c0002t0023 a0001c0003t0002 a0001c0003t0005 a0001c0003t0007 a0001c0003t0011 a0001c0004t0001 a0001c0004t0004 a0001c0004t0010 a0001c0004t0028 a0001c0006t0002 a0001c0006t0005 a0001c0008t0003 a0001c0008t0018 a0001c0009t0005 a0001c0012t0001 a0001c0018t0001 a0001c0020t0007 a0001c0022t0002 a0001c0025t0006 a0002c0023t0006 a0005c0021t0002 a0007c0017t0001	a0001c0001t0001g0059 a0001c0001t0001g0067 a0001c0001t0001g0071 others(35): Show a0001c0001t0001g0059 a0001c0001t0001g0067 a0001c0001t0001g0071 a0001c0001t0001g0075 a0001c0001t0001g0081 a0001c0001t0004g0078 a0001c0001t0024g0061 a0001c0002t0002g0013 a0001c0002t0002g0039 a0001c0002t0003g0041 a0001c0002t0003g0044 a0001c0002t0007g0022 a0001c0002t0019g0028 a0001c0002t0023g0019 a0001c0003t0002g0043 a0001c0003t0002g0046 a0001c0003t0005g0017 a0001c0003t0007g0037 a0001c0003t0011g0011 a0001c0004t0001g0088 a0001c0004t0004g0094 a0001c0004t0010g0089 a0001c0004t0010g0090 a0001c0004t0028g0098 a0001c0006t0002g0033 a0001c0006t0002g0034 a0001c0006t0005g0014 a0001c0008t0003g0021 a0001c0008t0018g0023 a0001c0009t0005g0010 a0001c0012t0001g0092 a0001c0018t0001g0096 a0001c0020t0007g0030 a0001c0022t0002g0040 a0001c0025t0006g0032 a0002c0023t0006g0035 a0005c0021t0002g0029 a0007c0017t0001g0062	38	96	0.3958	16	c.255 others(37): Show c.2556+96754_2556+96755insTATGAGGGTCCTCCCC	TRAPPC9	ENSG00000167632.18	transcript	ENST00000438773.4	protein_coding	17/22			chr8	TogoVar
TRAPPC9_chr8_139722725_140462744	140124730	C C	CCTCCGAG others(9): Show CCTCCGAGGGGAGGACG	intron_variant intron_variant	MODIFIER	HG02055.hp1 HG02615.hp1 HG03139.hp2 others(6): Show HG02055.hp1 HG02615.hp1 HG03139.hp2 HG03209.hp2 HG03225.hp2 NA18906.hp1 NA19240.hp1 NA19240.hp2 NA20300.hp2	a0001 a0003 a0006 a0001 a0003 a0006	a0001c0001 a0001c0003 a0001c0004 others(5): Show a0001c0001 a0001c0003 a0001c0004 a0001c0005 a0001c0007 a0001c0013 a0003c0011 a0006c0010	a0001c0001t0001 a0001c0003t0002 a0001c0004t0033 others(6): Show a0001c0001t0001 a0001c0003t0002 a0001c0004t0033 a0001c0005t0008 a0001c0007t0002 a0001c0007t0015 a0001c0013t0001 a0003c0011t0004 a0006c0010t0002	a0001c0001t0001g0068 a0001c0003t0002g0020 a0001c0004t0033g0084 others(6): Show a0001c0001t0001g0068 a0001c0003t0002g0020 a0001c0004t0033g0084 a0001c0005t0008g0076 a0001c0007t0002g0027 a0001c0007t0015g0015 a0001c0013t0001g0095 a0003c0011t0004g0091 a0006c0010t0002g0002	9	73	0.1233	16	c.255 others(37): Show c.2556+96728_2556+96729insCGTCCTCCCCTCGGAG	TRAPPC9	ENSG00000167632.18	transcript	ENST00000438773.4	protein_coding	17/22			chr8	TogoVar
TRAPPC9_chr8_139722725_140462744	140124730	C C	CCTCCTAG others(9): Show CCTCCTAGGGGAGGACG	intron_variant intron_variant	MODIFIER	HG00738.hp1 HG02486.hp1 HG02615.hp2 others(7): Show HG00738.hp1 HG02486.hp1 HG02615.hp2 HG02723.hp2 HG02895.hp1 HG02895.hp2 HG02897.hp2 HG02976.hp1 HG03139.hp1 NA19030.hp2	a0001 a0004 a0001 a0004	a0001c0001 a0001c0002 a0001c0003 others(3): Show a0001c0001 a0001c0002 a0001c0003 a0001c0004 a0001c0005 a0004c0016	a0001c0001t0008 a0001c0001t0029 a0001c0002t0017 others(5): Show a0001c0001t0008 a0001c0001t0029 a0001c0002t0017 a0001c0003t0002 a0001c0004t0001 a0001c0005t0008 a0001c0005t0030 a0004c0016t0026	a0001c0001t0008g0083 a0001c0001t0029g0077 a0001c0002t0017g0036 others(7): Show a0001c0001t0008g0083 a0001c0001t0029g0077 a0001c0002t0017g0036 a0001c0003t0002g0016 a0001c0003t0002g0018 a0001c0004t0001g0086 a0001c0004t0001g0093 a0001c0005t0008g0065 a0001c0005t0030g0063 a0004c0016t0026g0069	10	74	0.1351	16	c.255 others(37): Show c.2556+96728_2556+96729insCGTCCTCCCCTAGGAG	TRAPPC9	ENSG00000167632.18	transcript	ENST00000438773.4	protein_coding	17/22			chr8	TogoVar
TRAPPC9_chr8_139722725_140462744	140233623	C C	CCACACAC others(9): Show CCACACACACACACACA	intron_variant intron_variant	MODIFIER	HG00140.hp2 HG00639.hp1 HG00639.hp2 others(13): Show HG00140.hp2 HG00639.hp1 HG00639.hp2 HG00642.hp1 HG00642.hp2 HG01069.hp1 HG01071.hp2 HG01109.hp1 HG01109.hp2 HG01433.hp1 HG01433.hp2 HG02109.hp2 HG02895.hp2 HG04115.hp1 HG04115.hp2 NA19010.hp2	a0001 a0001	a0001c0001 a0001c0002 a0001c0003 others(4): Show a0001c0001 a0001c0002 a0001c0003 a0001c0004 a0001c0005 a0001c0006 a0001c0026	a0001c0001t0001 a0001c0001t0008 a0001c0001t0009 others(8): Show a0001c0001t0001 a0001c0001t0008 a0001c0001t0009 a0001c0002t0002 a0001c0002t0003 a0001c0003t0007 a0001c0003t0014 a0001c0004t0004 a0001c0005t0004 a0001c0006t0002 a0001c0026t0002	a0001c0001t0001g0060 a0001c0001t0001g0071 a0001c0001t0001g0073 others(13): Show a0001c0001t0001g0060 a0001c0001t0001g0071 a0001c0001t0001g0073 a0001c0001t0008g0083 a0001c0001t0009g0072 a0001c0002t0002g0024 a0001c0002t0002g0050 a0001c0002t0003g0007 a0001c0003t0007g0037 a0001c0003t0014g0026 a0001c0004t0004g0087 a0001c0005t0004g0055 a0001c0005t0004g0079 a0001c0006t0002g0033 a0001c0006t0002g0034 a0001c0026t0002g0048	16	42	0.3810	16	c.243 others(37): Show c.2432-12056_2432-12041dupTGTGTGTGTGTGTGTG	TRAPPC9	ENSG00000167632.18	transcript	ENST00000438773.4	protein_coding	16/22			chr8	TogoVar
TRAPPC9_chr8_139722725_140462744	140404909	C C	CGTGTGTG others(9): Show CGTGTGTGTGTGTGTGT	intron_variant intron_variant	MODIFIER	HG02717.hp1 HG02886.hp1 HG02717.hp1 HG02886.hp1	a0001 a0001	a0001c0002 a0001c0002	a0001c0002t0013 a0001c0002t0022 a0001c0002t0013 a0001c0002t0022	a0001c0002t0013g0005 a0001c0002t0022g0006 a0001c0002t0013g0005 a0001c0002t0022g0006	2	34	0.0588	16	c.100 others(33): Show c.1008+652_1008+667dupACACACACACACACAC	TRAPPC9	ENSG00000167632.18	transcript	ENST00000438773.4	protein_coding	6/22			chr8	TogoVar
TRAPPC9_chr8_139722725_140462744	140423579	T T	TACACACA others(9): Show TACACACACACACACAC	intron_variant intron_variant	MODIFIER	HG02723.hp1 HG02809.hp2 HG03209.hp2 others(1): Show HG02723.hp1 HG02809.hp2 HG03209.hp2 NA19030.hp2	a0001 a0001	a0001c0002 a0001c0003 a0001c0006 others(1): Show a0001c0002 a0001c0003 a0001c0006 a0001c0007	a0001c0002t0002 a0001c0003t0002 a0001c0006t0005 others(1): Show a0001c0002t0002 a0001c0003t0002 a0001c0006t0005 a0001c0007t0015	a0001c0002t0002g0013 a0001c0003t0002g0016 a0001c0006t0005g0014 others(1): Show a0001c0002t0002g0013 a0001c0003t0002g0016 a0001c0006t0005g0014 a0001c0007t0015g0015	4	29	0.1379	16	c.886 others(33): Show c.886+3020_886+3035dupGTGTGTGTGTGTGTGT	TRAPPC9	ENSG00000167632.18	transcript	ENST00000438773.4	protein_coding	5/22			chr8	TogoVar
TRAPPC9_chr8_139722725_140462744	140423663	T T	TATATACA others(9): Show TATATACACATATACAC	intron_variant intron_variant	MODIFIER	HG00140.hp2 HG00639.hp2 HG00733.hp2 others(28): Show HG00140.hp2 HG00639.hp2 HG00733.hp2 HG00738.hp1 HG01069.hp2 HG01070.hp2 HG01071.hp1 HG01106.hp1 HG01169.hp1 HG01192.hp1 HG01255.hp1 HG01433.hp1 HG01433.hp2 HG01496.hp2 HG02055.hp2 HG02109.hp2 HG02293.hp2 HG02486.hp2 HG02615.hp2 HG02717.hp1 HG02886.hp1 HG03195.hp2 HG03209.hp1 HG03225.hp2 HG03490.hp1 HG03490.hp2 HG03942.hp2 NA19010.hp1 NA19010.hp2 NA20300.hp1 NA21309.hp1	a0001 a0007 a0001 a0007	a0001c0001 a0001c0002 a0001c0003 others(10): Show a0001c0001 a0001c0002 a0001c0003 a0001c0004 a0001c0005 a0001c0008 a0001c0009 a0001c0018 a0001c0019 a0001c0022 a0001c0026 a0001c0027 a0007c0017	a0001c0001t0001 a0001c0001t0024 a0001c0002t0002 others(20): Show a0001c0001t0001 a0001c0001t0024 a0001c0002t0002 a0001c0002t0003 a0001c0002t0013 a0001c0002t0017 a0001c0002t0022 a0001c0003t0002 a0001c0003t0007 a0001c0003t0011 a0001c0004t0001 a0001c0004t0004 a0001c0004t0033 a0001c0005t0004 a0001c0005t0009 a0001c0008t0018 a0001c0009t0005 a0001c0018t0001 a0001c0019t0031 a0001c0022t0002 a0001c0026t0002 a0001c0027t0012 a0007c0017t0001	a0001c0001t0001g0053 a0001c0001t0001g0054 a0001c0001t0001g0060 others(28): Show a0001c0001t0001g0053 a0001c0001t0001g0054 a0001c0001t0001g0060 a0001c0001t0001g0073 a0001c0001t0024g0061 a0001c0002t0002g0001 a0001c0002t0002g0009 a0001c0002t0003g0007 a0001c0002t0003g0008 a0001c0002t0003g0038 a0001c0002t0003g0041 a0001c0002t0013g0005 a0001c0002t0017g0036 a0001c0002t0022g0006 a0001c0003t0002g0004 a0001c0003t0002g0043 a0001c0003t0007g0037 a0001c0003t0011g0011 a0001c0004t0001g0086 a0001c0004t0004g0094 a0001c0004t0033g0084 a0001c0005t0004g0055 a0001c0005t0009g0057 a0001c0008t0018g0023 a0001c0009t0005g0010 a0001c0018t0001g0096 a0001c0019t0031g0056 a0001c0022t0002g0040 a0001c0026t0002g0048 a0001c0027t0012g0012 a0007c0017t0001g0062	31	82	0.3780	16	c.886 others(33): Show c.886+2936_886+2951dupGTGTATATGTGTATAT	TRAPPC9	ENSG00000167632.18	transcript	ENST00000438773.4	protein_coding	5/22			chr8	TogoVar
TRAT1_chr3_108817786_108860005	108829586	A A	AACACACA others(9): Show AACACACACACACACAC	intron_variant intron_variant	MODIFIER	HG00558.hp1 HG00639.hp1 HG00733.hp2 others(38): Show HG00558.hp1 HG00639.hp1 HG00733.hp2 HG01070.hp1 HG01074.hp2 HG01081.hp2 HG01109.hp1 HG01169.hp1 HG01192.hp1 HG01256.hp1 HG01361.hp2 HG01978.hp2 HG02155.hp2 HG02273.hp1 HG02559.hp2 HG02572.hp2 HG02622.hp1 HG02818.hp1 HG02818.hp2 HG02886.hp1 HG03453.hp1 NA18943.hp1 NA18945.hp1 NA18951.hp2 NA18957.hp2 NA18971.hp1 NA18973.hp2 NA18986.hp2 NA18989.hp2 NA18999.hp2 NA19001.hp1 NA19001.hp2 NA19004.hp2 NA19011.hp2 NA19030.hp2 NA19062.hp2 NA19063.hp1 NA19066.hp2 NA19067.hp1 NA19075.hp1 NA19079.hp1	a0001 a0004 a0001 a0004	a0001c0001 a0004c0004 a0001c0001 a0004c0004	a0001c0001t0001 a0001c0001t0002 a0001c0001t0004 others(2): Show a0001c0001t0001 a0001c0001t0002 a0001c0001t0004 a0001c0001t0005 a0004c0004t0008	a0001c0001t0001g0062 a0001c0001t0001g0063 a0001c0001t0001g0102 others(30): Show a0001c0001t0001g0062 a0001c0001t0001g0063 a0001c0001t0001g0102 a0001c0001t0001g0146 a0001c0001t0001g0164 a0001c0001t0001g0185 a0001c0001t0001g0188 a0001c0001t0001g0190 a0001c0001t0001g0224 a0001c0001t0002g0003 a0001c0001t0002g0011 a0001c0001t0002g0032 a0001c0001t0002g0122 a0001c0001t0002g0131 a0001c0001t0002g0144 a0001c0001t0002g0145 a0001c0001t0002g0169 a0001c0001t0002g0181 a0001c0001t0002g0182 a0001c0001t0002g0183 a0001c0001t0002g0184 a0001c0001t0002g0186 a0001c0001t0002g0187 a0001c0001t0002g0189 a0001c0001t0002g0191 a0001c0001t0002g0209 a0001c0001t0002g0234 a0001c0001t0004g0048 a0001c0001t0004g0115 a0001c0001t0004g0119 a0001c0001t0004g0121 a0001c0001t0005g0248 a0004c0004t0008g0160	41	60	0.6833	16	c.8-1 others(29): Show c.8-1068_8-1053dupCACACACACACACACA	TRAT1	ENSG00000163519.14	transcript	ENST00000295756.11	protein_coding	1/5		INFO_REALIGN_3_PRIME	chr3	TogoVar
TRAT1_chr3_108817786_108860005	108833799	T T	TACACACA others(9): Show TACACACACACACACAC	intron_variant intron_variant	MODIFIER	NA20300.hp2 NA20300.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0004 a0001c0001t0004	a0001c0001t0004g0129 a0001c0001t0004g0129	1	102	0.0098	16	c.118 others(33): Show c.118+3037_118+3052dupCACACACACACACACA	TRAT1	ENSG00000163519.14	transcript	ENST00000295756.11	protein_coding	2/5		INFO_REALIGN_3_PRIME	chr3	TogoVar
TRAT1_chr3_108817786_108860005	108844843	C C	CAAAAAAA others(9): Show CAAAAAAAAAAAAAAAA	intron_variant intron_variant	MODIFIER	HG02886.hp2 HG03130.hp1 HG03195.hp1 HG02886.hp2 HG03130.hp1 HG03195.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0006 a0001c0001t0006	a0001c0001t0006g0027 a0001c0001t0006g0158 a0001c0001t0006g0027 a0001c0001t0006g0158	3	208	0.0144	16	c.153 others(33): Show c.153-2214_153-2199dupAAAAAAAAAAAAAAAA	TRAT1	ENSG00000163519.14	transcript	ENST00000295756.11	protein_coding	3/5		INFO_REALIGN_3_PRIME	chr3	TogoVar
TRDMT1_chr10_17132336_17206672	17145277	C C	CAAAACAA others(9): Show CAAAACAAAACAAAACA	3_prime_UTR_variant 3_prime_UTR_variant	MODIFIER	HG00140.hp1 HG02970.hp1 NA18946.hp1 others(1): Show HG00140.hp1 HG02970.hp1 NA18946.hp1 NA19074.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0090 a0001c0001t0091 a0001c0001t0092 others(1): Show a0001c0001t0090 a0001c0001t0091 a0001c0001t0092 a0001c0001t0093	a0001c0001t0090g0248 a0001c0001t0091g0237 a0001c0001t0092g0187 others(1): Show a0001c0001t0090g0248 a0001c0001t0091g0237 a0001c0001t0092g0187 a0001c0001t0093g0209	4	266	0.0150	16	c.37 others(27): Show c.3762_*3763insTGTTTTGTTTTGTTTT	TRDMT1	ENSG00000107614.22	transcript	ENST00000377799.8	protein_coding	11/11	3762		chr10	TogoVar
TRDMT1_chr10_17132336_17206672	17171111	A A	ATGTGTGT others(9): Show ATGTGTGTGTGTGTGTG	intron_variant intron_variant	MODIFIER	NA18612.hp2 NA18612.hp2	a0002 a0002	a0002c0002 a0002c0002	a0002c0002t0003 a0002c0002t0003	a0002c0002t0003g0129 a0002c0002t0003g0129	1	128	0.0078	16	c.175 others(33): Show c.175-2210_175-2195dupCACACACACACACACA	TRDMT1	ENSG00000107614.22	transcript	ENST00000377799.8	protein_coding	2/10			chr10	TogoVar
TRDMT1_chr10_17132336_17206672	17177180	T T	TTTTATTT others(9): Show TTTTATTTATTTATTTA	intron_variant intron_variant	MODIFIER	HG00099.hp1 HG00140.hp1 HG00423.hp2 others(127): Show HG00099.hp1 HG00140.hp1 HG00423.hp2 HG00438.hp1 HG00438.hp2 HG00558.hp2 HG00609.hp1 HG00639.hp1 HG00639.hp2 HG00642.hp2 HG00673.hp1 HG01069.hp1 HG01069.hp2 HG01070.hp1 HG01071.hp1 HG01071.hp2 HG01099.hp1 HG01167.hp1 HG01168.hp2 HG01169.hp1 HG01175.hp2 HG01243.hp1 HG01256.hp1 HG01261.hp2 HG01358.hp2 HG01361.hp1 HG01433.hp2 HG01928.hp1 HG01934.hp2 HG01981.hp1 HG01993.hp1 HG02004.hp2 HG02027.hp2 HG02040.hp1 HG02055.hp2 HG02056.hp2 HG02080.hp1 HG02080.hp2 HG02083.hp1 HG02083.hp2 HG02129.hp1 HG02129.hp2 HG02132.hp1 HG02148.hp1 HG02148.hp2 HG02155.hp1 HG02273.hp2 HG02451.hp1 HG02559.hp1 HG02602.hp1 HG02615.hp1 HG02622.hp2 HG02647.hp2 HG02723.hp2 HG02738.hp2 HG02809.hp2 HG02818.hp2 HG02886.hp1 HG02895.hp1 HG02922.hp2 HG02965.hp2 HG02976.hp1 HG03017.hp1 HG03098.hp2 HG03139.hp2 HG03195.hp1 HG03225.hp2 HG03239.hp1 HG03239.hp2 HG03453.hp1 HG03490.hp1 HG03491.hp1 HG03516.hp2 HG03540.hp1 HG03579.hp2 HG03654.hp2 HG03669.hp2 HG03704.hp1 HG03831.hp2 HG03834.hp2 HG03942.hp2 HG04199.hp2 HG06807.hp1 NA18939.hp1 NA18942.hp2 NA18945.hp2 NA18946.hp1 NA18946.hp2 NA18949.hp1 NA18950.hp2 NA18951.hp2 NA18954.hp2 NA18955.hp1 NA18960.hp1 NA18960.hp2 NA18962.hp2 NA18965.hp2 NA18969.hp2 NA18973.hp2 NA18975.hp2 NA18978.hp1 NA18979.hp2 NA18983.hp2 NA18986.hp2 NA18993.hp1 NA18993.hp2 NA19000.hp1 NA19000.hp2 NA19004.hp2 NA19005.hp2 NA19054.hp1 NA19055.hp2 NA19056.hp2 NA19057.hp1 NA19060.hp1 NA19064.hp2 NA19065.hp2 NA19074.hp1 NA19077.hp2 NA19079.hp1 NA19079.hp2 NA19081.hp2 NA19083.hp2 NA19085.hp2 NA19086.hp1 NA19087.hp1 NA19088.hp2 NA19240.hp1 NA20300.hp2 NA20752.hp2	a0001 a0002 a0003 a0001 a0002 a0003	a0001c0001 a0002c0002 a0002c0003 others(1): Show a0001c0001 a0002c0002 a0002c0003 a0003c0006	a0001c0001t0005 a0001c0001t0006 a0001c0001t0011 others(69): Show a0001c0001t0005 a0001c0001t0006 a0001c0001t0011 a0001c0001t0012 a0001c0001t0014 a0001c0001t0016 a0001c0001t0017 a0001c0001t0018 a0001c0001t0020 a0001c0001t0032 a0001c0001t0033 a0001c0001t0034 a0001c0001t0035 a0001c0001t0036 a0001c0001t0039 a0001c0001t0042 a0001c0001t0043 a0001c0001t0045 a0001c0001t0046 a0001c0001t0060 a0001c0001t0061 a0001c0001t0062 a0001c0001t0083 a0001c0001t0084 a0001c0001t0086 a0001c0001t0087 a0001c0001t0089 a0001c0001t0090 a0001c0001t0091 a0001c0001t0093 a0001c0001t0094 a0001c0001t0095 a0001c0001t0096 a0001c0001t0097 a0001c0001t0098 a0001c0001t0100 a0001c0001t0101 a0001c0001t0103 a0001c0001t0105 a0001c0001t0111 a0001c0001t0122 a0001c0001t0124 a0001c0001t0125 a0001c0001t0126 a0001c0001t0128 a0001c0001t0129 a0001c0001t0139 a0001c0001t0140 a0001c0001t0141 a0001c0001t0142 a0001c0001t0143 a0001c0001t0144 a0001c0001t0145 a0001c0001t0146 a0001c0001t0147 a0001c0001t0149 a0002c0002t0002 a0002c0002t0008 a0002c0002t0023 a0002c0002t0028 a0002c0002t0030 a0002c0002t0044 a0002c0002t0075 a0002c0002t0130 a0002c0003t0004 a0002c0003t0009 a0002c0003t0040 a0002c0003t0041 a0002c0003t0135 a0003c0006t0027 a0003c0006t0068 a0003c0006t0069	a0001c0001t0005g0020 a0001c0001t0005g0193 a0001c0001t0005g0198 others(117): Show a0001c0001t0005g0020 a0001c0001t0005g0193 a0001c0001t0005g0198 a0001c0001t0005g0204 a0001c0001t0005g0214 a0001c0001t0005g0225 a0001c0001t0005g0235 a0001c0001t0005g0255 a0001c0001t0005g0259 a0001c0001t0005g0263 a0001c0001t0005g0264 a0001c0001t0005g0316 a0001c0001t0006g0003 a0001c0001t0006g0194 a0001c0001t0006g0197 a0001c0001t0006g0208 a0001c0001t0006g0213 a0001c0001t0006g0218 a0001c0001t0006g0230 a0001c0001t0006g0254 a0001c0001t0006g0258 a0001c0001t0011g0231 a0001c0001t0011g0236 a0001c0001t0011g0242 a0001c0001t0011g0245 a0001c0001t0011g0247 a0001c0001t0011g0250 a0001c0001t0012g0298 a0001c0001t0012g0315 a0001c0001t0014g0319 a0001c0001t0014g0323 a0001c0001t0014g0325 a0001c0001t0016g0308 a0001c0001t0016g0310 a0001c0001t0016g0311 a0001c0001t0016g0313 a0001c0001t0017g0238 a0001c0001t0017g0240 a0001c0001t0018g0244 a0001c0001t0018g0246 a0001c0001t0018g0249 a0001c0001t0018g0251 a0001c0001t0020g0305 a0001c0001t0020g0306 a0001c0001t0020g0314 a0001c0001t0032g0023 a0001c0001t0033g0022 a0001c0001t0034g0234 a0001c0001t0034g0239 a0001c0001t0035g0243 a0001c0001t0036g0261 a0001c0001t0039g0278 a0001c0001t0042g0321 a0001c0001t0042g0324 a0001c0001t0043g0312 a0001c0001t0045g0215 a0001c0001t0046g0228 a0001c0001t0060g0309 a0001c0001t0061g0307 a0001c0001t0062g0293 a0001c0001t0083g0227 a0001c0001t0084g0226 a0001c0001t0086g0195 a0001c0001t0087g0201 a0001c0001t0089g0268 a0001c0001t0090g0248 a0001c0001t0091g0237 a0001c0001t0093g0209 a0001c0001t0094g0233 a0001c0001t0095g0241 a0001c0001t0096g0229 a0001c0001t0097g0192 a0001c0001t0098g0260 a0001c0001t0100g0216 a0001c0001t0101g0210 a0001c0001t0103g0212 a0001c0001t0105g0224 a0001c0001t0111g0211 a0001c0001t0122g0299 a0001c0001t0124g0281 a0001c0001t0125g0279 a0001c0001t0126g0280 a0001c0001t0128g0283 a0001c0001t0129g0303 a0001c0001t0139g0318 a0001c0001t0140g0317 a0001c0001t0141g0329 a0001c0001t0142g0331 a0001c0001t0143g0333 a0001c0001t0144g0326 a0001c0001t0145g0332 a0001c0001t0146g0327 a0001c0001t0147g0334 a0001c0001t0149g0320 a0002c0002t0002g0006 a0002c0002t0002g0114 a0002c0002t0002g0115 a0002c0002t0002g0118 a0002c0002t0002g0125 a0002c0002t0002g0153 a0002c0002t0002g0179 a0002c0002t0008g0113 a0002c0002t0008g0123 a0002c0002t0008g0154 a0002c0002t0023g0017 a0002c0002t0028g0275 a0002c0002t0030g0144 a0002c0002t0044g0170 a0002c0002t0075g0152 a0002c0002t0130g0184 a0002c0003t0004g0092 a0002c0003t0009g0107 a0002c0003t0040g0081 a0002c0003t0040g0089 a0002c0003t0041g0095 a0002c0003t0135g0088 a0003c0006t0027g0271 a0003c0006t0027g0272 a0003c0006t0068g0273 a0003c0006t0069g0274	130	202	0.6436	16	c.65- others(31): Show c.65-2536_65-2521dupTAAATAAATAAATAAA	TRDMT1	ENSG00000107614.22	transcript	ENST00000377799.8	protein_coding	1/10			chr10	TogoVar
TRDMT1_chr10_17132336_17206672	17177713	A A	AACACACA others(9): Show AACACACACACACACAC	intron_variant intron_variant	MODIFIER	HG00280.hp2 HG02622.hp1 HG02647.hp1 HG00280.hp2 HG02622.hp1 HG02647.hp1	a0002 a0002	a0002c0002 a0002c0002	a0002c0002t0003 a0002c0002t0003	a0002c0002t0003g0133 a0002c0002t0003g0162 a0002c0002t0003g0186 a0002c0002t0003g0133 a0002c0002t0003g0162 a0002c0002t0003g0186	3	106	0.0283	16	c.65- others(31): Show c.65-3069_65-3054dupGTGTGTGTGTGTGTGT	TRDMT1	ENSG00000107614.22	transcript	ENST00000377799.8	protein_coding	1/10			chr10	TogoVar
TRDMT1_chr10_17132336_17206672	17186049	T T	TAATAAAT others(9): Show TAATAAATAAATAAATA	intron_variant intron_variant	MODIFIER	HG02155.hp1 HG03669.hp2 HG02155.hp1 HG03669.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0005 a0001c0001t0105 a0001c0001t0005 a0001c0001t0105	a0001c0001t0005g0225 a0001c0001t0105g0224 a0001c0001t0005g0225 a0001c0001t0105g0224	2	84	0.0238	16	c.65- others(33): Show c.65-11405_65-11390dupTATTTATTTATTTATT	TRDMT1	ENSG00000107614.22	transcript	ENST00000377799.8	protein_coding	1/10			chr10	TogoVar
TRDN_chr6_123211339_123641950	123223672	T T	TCTTCCTT others(9): Show TCTTCCTTCCTTCCTTC	intron_variant intron_variant	MODIFIER	HG00423.hp2 HG00423.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0003 a0001c0001t0003	a0001c0001t0003g0036 a0001c0001t0003g0036	1	48	0.0208	16	c.201 others(33): Show c.2014+405_2014+420dupGAAGGAAGGAAGGAAG	TRDN	ENSG00000186439.15	transcript	ENST00000334268.9	protein_coding	39/40			chr6	TogoVar
TRDN_chr6_123211339_123641950	123267101	C C	CAAAAAAA others(9): Show CAAAAAAAAAAAAAAAA	intron_variant intron_variant	MODIFIER	HG02280.hp2 HG03098.hp2 HG02280.hp2 HG03098.hp2	a0002 a0005 a0002 a0005	a0002c0004 a0005c0007 a0002c0004 a0005c0007	a0002c0004t0021 a0005c0007t0004 a0002c0004t0021 a0005c0007t0004	a0002c0004t0021g0147 a0005c0007t0004g0003 a0002c0004t0021g0147 a0005c0007t0004g0003	2	8	0.2500	16	c.178 others(33): Show c.1783+605_1783+606insTTTTTTTTTTTTTTTT	TRDN	ENSG00000186439.15	transcript	ENST00000334268.9	protein_coding	32/40			chr6	TogoVar
TRDN_chr6_123211339_123641950	123400167	G G	GTATATAT others(9): Show GTATATATATATATATA	intron_variant intron_variant	MODIFIER	HG00423.hp2 HG02280.hp2 HG02615.hp1 others(6): Show HG00423.hp2 HG02280.hp2 HG02615.hp1 HG02818.hp1 HG02922.hp1 HG03130.hp2 HG04228.hp2 NA18944.hp2 NA19030.hp2	a0001 a0002 a0003 others(3): Show a0001 a0002 a0003 a0004 a0005 a0022	a0001c0001 a0002c0004 a0003c0003 others(3): Show a0001c0001 a0002c0004 a0003c0003 a0004c0006 a0005c0007 a0022c0029	a0001c0001t0001 a0001c0001t0003 a0001c0001t0004 others(5): Show a0001c0001t0001 a0001c0001t0003 a0001c0001t0004 a0002c0004t0001 a0003c0003t0012 a0004c0006t0002 a0005c0007t0004 a0022c0029t0006	a0001c0001t0001g0141 a0001c0001t0003g0036 a0001c0001t0003g0078 others(6): Show a0001c0001t0001g0141 a0001c0001t0003g0036 a0001c0001t0003g0078 a0001c0001t0004g0140 a0002c0004t0001g0055 a0003c0003t0012g0133 a0004c0006t0002g0040 a0005c0007t0004g0003 a0022c0029t0006g0093	9	14	0.6429	16	c.105 others(35): Show c.1052-6506_1052-6491dupTATATATATATATATA	TRDN	ENSG00000186439.15	transcript	ENST00000334268.9	protein_coding	12/40			chr6	TogoVar
TRDN_chr6_123211339_123641950	123400167	G G	GTATGTAT others(9): Show GTATGTATATATATATA	intron_variant intron_variant	MODIFIER	HG02622.hp1 HG02622.hp1	a0015 a0015	a0015c0015 a0015c0015	a0015c0015t0006 a0015c0015t0006	a0015c0015t0006g0020 a0015c0015t0006g0020	1	6	0.1667	16	c.105 others(35): Show c.1052-6491_1052-6490insTATATATATATACATA	TRDN	ENSG00000186439.15	transcript	ENST00000334268.9	protein_coding	12/40			chr6	TogoVar
TRDN_chr6_123211339_123641950	123499719	A A	AAAAAAAA others(9): Show AAAAAAAAAAAAAATAT	intron_variant intron_variant	MODIFIER	HG03579.hp1 HG03579.hp1	a0012 a0012	a0012c0035 a0012c0035	a0012c0035t0002 a0012c0035t0002	a0012c0035t0002g0012 a0012c0035t0002g0012	1	71	0.0141	16	c.794 others(33): Show c.794-2468_794-2467insATATTTTTTTTTTTTT	TRDN	ENSG00000186439.15	transcript	ENST00000334268.9	protein_coding	8/40			chr6	TogoVar
TRDN_chr6_123211339_123641950	123514631	A A	AACACACA others(9): Show AACACACACACACACAC	intron_variant intron_variant	MODIFIER	NA19043.hp1 NA19043.hp1	a0002 a0002	a0002c0004 a0002c0004	a0002c0004t0020 a0002c0004t0020	a0002c0004t0020g0144 a0002c0004t0020g0144	1	41	0.0244	16	c.550 others(33): Show c.550+1494_550+1509dupGTGTGTGTGTGTGTGT	TRDN	ENSG00000186439.15	transcript	ENST00000334268.9	protein_coding	6/40			chr6	TogoVar
TREM1_chr6_41268605_41291682	41270446	A A	AATATATA others(9): Show AATATATATATATATAT	downstream_gene_variant downstream_gene_variant	MODIFIER	HG01496.hp1 HG03209.hp2 HG01496.hp1 HG03209.hp2	a0001 a0002 a0001 a0002	a0001c0001 a0002c0002 a0001c0001 a0002c0002	a0001c0001t0011 a0002c0002t0001 a0001c0001t0011 a0002c0002t0001	a0001c0001t0011g0029 a0002c0002t0001g0056 a0001c0001t0011g0029 a0002c0002t0001g0056	2	17	0.1176	16	c.56 others(27): Show c.5663_*5678dupATATATATATATATAT	TREM1	ENSG00000124731.13	transcript	ENST00000244709.9	protein_coding		3158		chr6	TogoVar
TREM2_chr6_41153508_41168116	41155373	G G	GTCTCTCT others(9): Show GTCTCTCTCTCTCTCTC	downstream_gene_variant downstream_gene_variant	MODIFIER	HG02895.hp1 NA18967.hp1 NA18967.hp2 others(1): Show HG02895.hp1 NA18967.hp1 NA18967.hp2 NA19002.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0001 a0001c0001t0001g0006 a0001c0001t0001g0001 a0001c0001t0001g0006	4	310	0.0129	16	c.33 others(27): Show c.3390_*3391insGAGAGAGAGAGAGAGA	TREM2	ENSG00000095970.17	transcript	ENST00000373113.8	protein_coding		3134		chr6	TogoVar
TREM2_chr6_41153508_41168116	41155375	T T	TTCTCTCT others(9): Show TTCTCTCTCTCTCTCTC	downstream_gene_variant downstream_gene_variant	MODIFIER	HG00642.hp1 HG00735.hp2 HG01928.hp1 others(19): Show HG00642.hp1 HG00735.hp2 HG01928.hp1 HG02055.hp1 HG02273.hp2 HG02572.hp2 HG02738.hp2 HG02895.hp2 HG02897.hp1 HG02965.hp1 HG03130.hp2 HG03492.hp2 HG03688.hp1 HG03688.hp2 NA18747.hp2 NA18943.hp1 NA18966.hp2 NA19003.hp1 NA19065.hp1 NA19065.hp2 NA19066.hp2 NA19074.hp1	a0001 a0005 a0001 a0005	a0001c0001 a0005c0008 a0001c0001 a0005c0008	a0001c0001t0001 a0005c0008t0001 a0001c0001t0001 a0005c0008t0001	a0001c0001t0001g0001 a0001c0001t0001g0002 a0001c0001t0001g0010 others(4): Show a0001c0001t0001g0001 a0001c0001t0001g0002 a0001c0001t0001g0010 a0001c0001t0001g0021 a0001c0001t0001g0025 a0001c0001t0001g0030 a0005c0008t0001g0036	22	81	0.2716	16	c.33 others(27): Show c.3388_*3389insGAGAGAGAGAGAGAGA	TREM2	ENSG00000095970.17	transcript	ENST00000373113.8	protein_coding		3132		chr6	TogoVar
TREM2_chr6_41153508_41168116	41165455	C C	CTTTTTTT others(9): Show CTTTTTTTTTTTTTTTT	upstream_gene_variant upstream_gene_variant	MODIFIER	HG02895.hp2 HG02895.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0001 a0001c0001t0001g0001	1	34	0.0294	16	c.-23 others(27): Show c.-2374_-2373insAAAAAAAAAAAAAAAA	TREM2	ENSG00000095970.17	transcript	ENST00000373113.8	protein_coding		2340		chr6	TogoVar
TREML1_chr6_41144337_41159347	41155373	G G	GTCTCTCT others(9): Show GTCTCTCTCTCTCTCTC	upstream_gene_variant upstream_gene_variant	MODIFIER	HG02895.hp2 HG02895.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0005 a0001c0001t0001g0005	1	280	0.0036	16	c.-10 others(27): Show c.-1086_-1085insGAGAGAGAGAGAGAGA	TREML1	ENSG00000161911.12	transcript	ENST00000426005.7	protein_coding		1027		chr6	TogoVar
TREML1_chr6_41144337_41159347	41155375	T T	TTCTCTCT others(9): Show TTCTCTCTCTCTCTCTC	upstream_gene_variant upstream_gene_variant	MODIFIER	HG00642.hp2 HG00735.hp2 HG01928.hp1 others(20): Show HG00642.hp2 HG00735.hp2 HG01928.hp1 HG02055.hp2 HG02273.hp2 HG02572.hp1 HG02735.hp2 HG02738.hp1 HG02809.hp2 HG02895.hp1 HG02897.hp1 HG02965.hp2 HG03130.hp1 HG03492.hp1 HG03688.hp1 HG03688.hp2 NA18747.hp2 NA18943.hp2 NA18966.hp2 NA19003.hp2 NA19066.hp2 NA19074.hp1 NA19086.hp2	a0001 a0001	a0001c0001 a0001c0006 a0001c0001 a0001c0006	a0001c0001t0001 a0001c0006t0001 a0001c0001t0001 a0001c0006t0001	a0001c0001t0001g0001 a0001c0001t0001g0002 a0001c0001t0001g0005 others(4): Show a0001c0001t0001g0001 a0001c0001t0001g0002 a0001c0001t0001g0005 a0001c0001t0001g0007 a0001c0001t0001g0010 a0001c0001t0001g0021 a0001c0006t0001g0018	23	75	0.3067	16	c.-10 others(27): Show c.-1088_-1087insGAGAGAGAGAGAGAGA	TREML1	ENSG00000161911.12	transcript	ENST00000426005.7	protein_coding		1029		chr6	TogoVar
TREML4_chr6_41223349_41243882	41225531	A A	AGAAGGAA others(9): Show AGAAGGAAGGAAGGAAG	upstream_gene_variant upstream_gene_variant	MODIFIER	HG00558.hp2 HG00741.hp1 HG02145.hp2 others(3): Show HG00558.hp2 HG00741.hp1 HG02145.hp2 HG02895.hp1 HG02896.hp2 HG02897.hp1	a0002 a0002	a0002c0002 a0002c0002	a0002c0002t0004 a0002c0002t0013 a0002c0002t0004 a0002c0002t0013	a0002c0002t0004g0005 a0002c0002t0004g0050 a0002c0002t0013g0016 a0002c0002t0004g0005 a0002c0002t0004g0050 a0002c0002t0013g0016	6	387	0.0155	16	c.-28 others(27): Show c.-2897_-2896insGAAGGAAGGAAGGAAG	TREML4	ENSG00000188056.12	transcript	ENST00000341495.7	protein_coding		2817		chr6	TogoVar
TREML4_chr6_41223349_41243882	41225555	G G	GGAAGGAA others(9): Show GGAAGGAAGGAAGGAAA	upstream_gene_variant upstream_gene_variant	MODIFIER	HG00323.hp1 HG01934.hp1 HG02258.hp1 others(4): Show HG00323.hp1 HG01934.hp1 HG02258.hp1 HG03486.hp2 HG03516.hp2 NA18906.hp2 NA19240.hp1	a0002 a0002	a0002c0004 a0002c0004	a0002c0004t0007 a0002c0004t0012 a0002c0004t0007 a0002c0004t0012	a0002c0004t0007g0011 a0002c0004t0007g0056 a0002c0004t0012g0018 a0002c0004t0007g0011 a0002c0004t0007g0056 a0002c0004t0012g0018	7	417	0.0168	16	c.-28 others(27): Show c.-2873_-2872insGAAGGAAGGAAGGAAA	TREML4	ENSG00000188056.12	transcript	ENST00000341495.7	protein_coding		2793		chr6	TogoVar
TRERF1_chr6_42219931_42456926	42299094	A A	ATCTATCT others(9): Show ATCTATCTATCTATCTG	intron_variant intron_variant	MODIFIER	HG01256.hp2 HG01256.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0028 a0001c0001t0028	a0001c0001t0028g0109 a0001c0001t0028g0109	1	139	0.0072	16	c.-25 others(35): Show c.-259+1543_-259+1544insCAGATAGATAGATAGA	TRERF1	ENSG00000124496.13	transcript	ENST00000695948.1	protein_coding	4/17			chr6	TogoVar
TRERF1_chr6_42219931_42456926	42299116	C C	CTGTCTGT others(9): Show CTGTCTGTATCTATCTA	intron_variant intron_variant	MODIFIER	HG04204.hp1 HG04204.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0119 a0001c0001t0001g0119	1	97	0.0103	16	c.-25 others(35): Show c.-259+1521_-259+1522insTAGATAGATACAGACA	TRERF1	ENSG00000124496.13	transcript	ENST00000695948.1	protein_coding	4/17			chr6	TogoVar
TRERF1_chr6_42219931_42456926	42392931	T T	TACACACA others(9): Show TACACACACACACACAC	intron_variant intron_variant	MODIFIER	HG01891.hp2 HG02809.hp1 HG01891.hp2 HG02809.hp1	a0001 a0005 a0001 a0005	a0001c0001 a0005c0033 a0001c0001 a0005c0033	a0001c0001t0045 a0005c0033t0011 a0001c0001t0045 a0005c0033t0011	a0001c0001t0045g0163 a0005c0033t0011g0129 a0001c0001t0045g0163 a0005c0033t0011g0129	2	3	0.6667	16	c.-45 others(37): Show c.-453-29868_-453-29853dupGTGTGTGTGTGTGTGT	TRERF1	ENSG00000124496.13	transcript	ENST00000695948.1	protein_coding	2/17			chr6	TogoVar
TRERF1_chr6_42219931_42456926	42408210	A A	AATATATA others(9): Show AATATATATATATATAT	intron_variant intron_variant	MODIFIER	HG03831.hp2 HG03831.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0142 a0001c0001t0001g0142	1	125	0.0080	16	c.-45 others(37): Show c.-454+42951_-454+42966dupATATATATATATATAT	TRERF1	ENSG00000124496.13	transcript	ENST00000695948.1	protein_coding	2/17			chr6	TogoVar

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